Spo04387 (gene)

Overview
NameSpo04387
Typegene
OrganismSpinacia oleracea (Spinach)
Descriptionembryo defective 1303
Locationchr3 : 2722256 .. 2726807 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTATTTTAAAGTTTTTTTTTGCTTGCCAAAAAGAAAAAGAAAAAAGAAGAGGTAAATAAGCGTCGATGTCATAATAATCTTCTCTCCTCAACTCCAAAGCCGTGCTCTGCATCTCCATCCTCCTCCTCCCTCATCCTCCTCTCAAAACCCTCCAAGAAAAGCAACATCTTCTAGTTGTAGTCGGAGGCGCCTGTGCCAACCACCTATCTTCTCTGCTGCTGCTATTCTGGGTAATTATCTACAATCGATTCTTCTATTGATTTTATTTGTATTTTTATTGATTCAAAGACGTAATTTTCTAAATTGTTAATTATATTCTGTTGGGTTTGTCTTGGTGTTGTGAAATTCGTACTATACCTTTTTTATATATATGAATCGATATTTCTGTTATGACGCGTTTCAAATGGTTAAATATACTCAGTTGGGTCTGTTTTGGGGTTTTTCATGAGAAATTCTACTTGAAATTCGTACAATCCTTTCAATTTTCATGATATTTGGCTGTTGTTTATTGTTTTCTGGAGCTTATGTTTGTTCAGATTGTTTAGGTTAAAGTTGATGATTTGTAAATGGCGATTTCTTCACTGAGTGCCACTTCTGGACTTTCCTCGGTGTTATTATCCCCAGGTTTGTGAACTTTCTCTTGTATGCCCAAGTAAATTAATCAAGGTATTAATTGTTTGTCAATGGGTCTTCATCTGTTTAGTTTCTTGGATAAGAACATAAGATTGGGTTTTAGGGAAGTTTGATGAAACTGGTTAGCTAAATAAAGTAGATTTAGATAGTATTATCTGCCTATGAATTTGGCTCAAGATACCTTTGATGTGTGAAATTTCAATTGGGTTTGGTTATTAGTGTATGCTAAGAATATACACTTTTTGCTTAATGGTTCAAAGTGCGTTGTAGATAGTTTAACGGTGCTGAAAAAGCTGTATGGTGCTCCAAAAATTTCAACCTATTTTCATGGAATAGCCCTAATGTGGTTTTTGATAAAAACATAAGTTAGCTTCATTATATATTTTTTGACGTTCTACTGTCTTGCTCACTGTTACCCGATTCGCTAGTATGAGACTGGGTACGGGTTCGCAGTTCGCTACCTAATTTGCTAAATTAGTCCAAATTGTACCACTTTCATGTTATAATTCGCCTTTTCGGTTCGCGGTTCGTGGGGCGATTAAAGAATTAGGTAACACTTGCTTCTCGCCAAGCTGGCTTGGTGGCTTTTGCCTGCTCTGTGGTATCTAATGGCAATACATTTTTTAACAGTGAGATTTGACCTGCCAAGGAGGGGTCCATTAAAGCATCATAACCACGCCGTAGCAGGGCTTGGTAAGGTGTCATTTGGTTTGAATCGTGAACAACAGTTAGTGAGGCTTGGCAAGAGTCACAGTCAAAGGTCAACTCCCACAACCAGAGTACGCTCTGCTTCCGTGGTCTGTTCAGCTGCTTTGGTAAGCTTTTCCTACATGAGCTATGATTCACTTTTTACTCTATCCAACTTTCTTAGTTCTATTTGCGATTCCTGTGATAAATTTTAGTTACAAGGATTTTAGATGTAGCCATGAGTGAACGTTAGAAATAAATTTAGTAAAGTTGTATGTGAAATATCAGTACTACATAAATAAAATTACTTAAGTCAGTTTTGGCCCTTTTGGGATGGATGAGATTATTCGCACACACCAAATATATAACAGAAGTATGTTTTAGCCAGTCTATCAGTTTACTCTCAAGAGTCGTATTTGTAAGACATACGGGACTTATCATAAGTATAATGATTGTCATCATGTTAGGGATCTCTCCCTTTCTAGGCATTTTTTCTGCTGTGTTTTAATTCTTATGCTCCGCTGTAAAAGTAGTTGTTTTTATAATAATATTTAGATCACTTAGATGTTTTATCTACTCCTGAAGTTGCTAGGAATTTGTTTGGGTATGCAATGCCGTTTATAATCTAATGTGTTTGTTTTGCTGTATTACTATTAGAAGCCACAATATATAATATTACATGAAAAACAAAATCTGTAAACATAAAAGTAGTTTATGGAACTGGGTTGACGCACTTTCAGTATCCCAACTTGGTTGTTGCCATTTGATACCTCAGGCCAGAGTTCATTATTTTTGTTCTTTTATTGATTAAGAGTTAGATAGATATCCAATCTAAAATACTGATACTTCAACGATTTCAAGTAATTGAATAAAGGGTGTCTTTTCCTACCTCTGTCCCAGACTCCCGTTAGTTGGCAACTTGGCATGCTCTGGAATGAGTAAATCAAGGGAACATTGTTTGTTTCCCACCATTTCTATTGCTTTTAACAAGTATCCTTCTTTATTAACAACATGACAACTATCTAGAACATTCATAGTAGGATGGAGGGAGTATTTGATGACCAAAAGTCCGTGAACAAAGTTGGGCCATGCCTTTGTTTAACTCCCCAGTTGGGCCTTAGCAAAATTCTGTGTGGACAATTTTTGTTATTTGGGGAGCACGTAAAGCATCTTATGTTGGTATAACAATATATGAGTGATCCTTTTGCAAATTAGCTATAGAAAACTAAAACCAGTTCTCACGTCGAAGGGAACCTTCACTCATGGGATTTCTTTCTGAAATGTGAAATTGGGTTAAGCGTCTAAACTTTCAAGAGAAATCTTAGAGACTACTAGCTGAATAGAAACATAGGGTGAGGTTGGGGTGGAGCAGTGTTACCTAATTCTCTAATCAGCCCATGAACCACGAACCGAAAAAGCGAATTATAACATGAAAATGGTACAATTTTGGTCTAAATAAGAAAATTAGGTAGCGAATTGTGAACCGTAACCAATCTCGCACTAGCGAATCAGGTAACAGTGGGGTGGAGGTTAAGAAGAGGAAGAGTTCTAGTGTGAAATGTGAAGCAAGTCCGTGGGAGAGCCTATTCTCCATAGCAGTATCTGATATTTTACATCACACTTAAGTATGGATTATAGTTTCAGAGTTCACCTTGTTTCTCAAGATTTAGTTAAAGCTTTAAAGGGTCTTGTGACAACGGTTTACTTGTGTTATGCTATTATGTTATCTTTGTACCCTTGTATTTATATTTATATTTATATGCATGAGGAGCCTATTATATTTATATGCATGAGGAGCCTATTATATTTATATGCATGAGGCGCCCTAATAAGATCTTCCCATGATTTCATTTCGTATTGCAGAATGCCAAATGCGGAGCTGAAGGACAGACTCAAACTGTAGAGAAGCCAACTTCTGTAATTTCAAATGCACCAGGTAAGTTTGTCATTTCTCATTTCTGCATTTCATGAATTGGCTGAGAGCAGAGACTGATTGGATTCGGGTTTGTATTTTGGCGTTTCAACTTGGAATAAAATTTGATTATAAGGCTCCATTTGGTTTGGCGTAAAACGTTTTCAGTGAAAAATGATTTTCCATGGAAAACCTTTTTCAAGGAAAAACTCAATTCCCAACTAGTTTTCCTTTGTTTGTCTTTACAAGAAAATTAATAGAAAATAGGAAAATAGGAGAAGATGAGTGATGATTGAAGGGAGAAGGGAGAAGGAGGTAAGGAGGAAAGATGGAAAAATGGTTTCCCTTCATTTCAAATGGAAAATGGCTTTCCACCTTTGAGGTAGTTATGGAAAATGGTTTTCCATCCCTTACAAAACCAAACAACGTAAAATGATTGAAAAGGGGAAAGTCGTTTTCCATGAAAACATTTTACACCCTACCAAACAGAGCCTAAGTAAAAAACTGAGCTTGTTGTAAAATATGTTTACATGGTCAACTTTACATAGGAAAGAGATGCATGATTTGATTGTTTTTATCTATGGCTCATGAATTTGATTTTGATAAAAGATCTGCTGAAAACATGACGGTTTGAAACTTTGAATGTCAACTTTACATGTTTTCATTTTCTAGAGGCGCCATTGACGTAAAGTCGTTAATTCTAATTTGTTTGCAGGTAAAGAGAAATCACCACTACTTGATGATGGAGGAACCGGATTCCCCCCACGCGATGACGACGGTGGTGGCGGCGGCGGAGGTGGTGGAGGTGGTAATTATAGTGGTGGGTTCTTCTTTTTCGGGTTTCTAGCATTCCTTGGATTTTTGAAAGACAAAGAAAATGAAGGACCCTATCAAGATTCTAGAGGAAGATAAACTGTTGAGCTTGACTGTCTTTCTATAGTTTTCATATTATAGTCTCTTTTGTAGTTTCTTACATCACATTTGTAACTTATTAATCATAAGAGGTGTTTTAATGTATCATGTTTAATTGCTTACATCTCTTTTTTTCTATGATCAATATTAGTCATTCCAAGAAATTCATTAAGTGTCAAGGATATTAAGTTGGAAATGTGGCCTAGAATTCAGGGTCGACTCTTTCTTTTGTTTGGGAGCACTAGTTTAGTGGATATAAATGGAAAGGATTAGATTATTTCTTTCTTTTAAATAGAGTTGATGATAAGCAAAATGCAGGAGTATTCTCTATTCTATAATGGTCTGTTTGGGAACATGGTTTTAAAATCCTGGGTTGACCCAATTAACTTGTTTGAAAACTCTTAG

mRNA sequence

TTTTTATTTTAAAGTTTTTTTTTGCTTGCCAAAAAGAAAAAGAAAAAAGAAGAGGTAAATAAGCGTCGATGTCATAATAATCTTCTCTCCTCAACTCCAAAGCCGTGCTCTGCATCTCCATCCTCCTCCTCCCTCATCCTCCTCTCAAAACCCTCCAAGAAAAGCAACATCTTCTAGTTGTAGTCGGAGGCGCCTGTGCCAACCACCTATCTTCTCTGCTGCTGCTATTCTGGGTTAAAGTTGATGATTTGTAAATGGCGATTTCTTCACTGAGTGCCACTTCTGGACTTTCCTCGGTGTTATTATCCCCAGTGAGATTTGACCTGCCAAGGAGGGGTCCATTAAAGCATCATAACCACGCCGTAGCAGGGCTTGGTAAGGTGTCATTTGGTTTGAATCGTGAACAACAGTTAGTGAGGCTTGGCAAGAGTCACAGTCAAAGGTCAACTCCCACAACCAGAGTACGCTCTGCTTCCGTGGTCTGTTCAGCTGCTTTGAATGCCAAATGCGGAGCTGAAGGACAGACTCAAACTGTAGAGAAGCCAACTTCTGTAATTTCAAATGCACCAGGTAAAGAGAAATCACCACTACTTGATGATGGAGGAACCGGATTCCCCCCACGCGATGACGACGGTGGTGGCGGCGGCGGAGGTGGTGGAGGTGGTAATTATAGTGGTGGGTTCTTCTTTTTCGGGTTTCTAGCATTCCTTGGATTTTTGAAAGACAAAGAAAATGAAGGACCCTATCAAGATTCTAGAGGAAGATAAACTGTTGAGCTTGACTGTCTTTCTATAGTTTTCATATTATAGTCTCTTTTGTAGTTTCTTACATCACATTTGTAACTTATTAATCATAAGAGGTGTTTTAATGTATCATGTTTAATTGCTTACATCTCTTTTTTTCTATGATCAATATTAGTCATTCCAAGAAATTCATTAAGTGTCAAGGATATTAAGTTGGAAATGTGGCCTAGAATTCAGGGTCGACTCTTTCTTTTGTTTGGGAGCACTAGTTTAGTGGATATAAATGGAAAGGATTAGATTATTTCTTTCTTTTAAATAGAGTTGATGATAAGCAAAATGCAGGAGTATTCTCTATTCTATAATGGTCTGTTTGGGAACATGGTTTTAAAATCCTGGGTTGACCCAATTAACTTGTTTGAAAACTCTTAG

Coding sequence (CDS)

ATGGCGATTTCTTCACTGAGTGCCACTTCTGGACTTTCCTCGGTGTTATTATCCCCAGTGAGATTTGACCTGCCAAGGAGGGGTCCATTAAAGCATCATAACCACGCCGTAGCAGGGCTTGGTAAGGTGTCATTTGGTTTGAATCGTGAACAACAGTTAGTGAGGCTTGGCAAGAGTCACAGTCAAAGGTCAACTCCCACAACCAGAGTACGCTCTGCTTCCGTGGTCTGTTCAGCTGCTTTGAATGCCAAATGCGGAGCTGAAGGACAGACTCAAACTGTAGAGAAGCCAACTTCTGTAATTTCAAATGCACCAGGTAAAGAGAAATCACCACTACTTGATGATGGAGGAACCGGATTCCCCCCACGCGATGACGACGGTGGTGGCGGCGGCGGAGGTGGTGGAGGTGGTAATTATAGTGGTGGGTTCTTCTTTTTCGGGTTTCTAGCATTCCTTGGATTTTTGAAAGACAAAGAAAATGAAGGACCCTATCAAGATTCTAGAGGAAGATAA

Protein sequence

MAISSLSATSGLSSVLLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVRLGKSHSQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLDDGGTGFPPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRGR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04387.1Spo04387.1mRNA


Homology
[Close]
BLAST of Spo04387.1 vs. NCBI nr
Match: gi|902217594|gb|KNA17783.1| (hypothetical protein SOVF_076800 [Spinacia oleracea])

HSP 1 Score: 325.5 bits (833), Expect = 5.600e-86
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 1   MAISSLSATSGLSSVLLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVRLGKSH 60
           MAISSLSATSGLSSVLLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVRLGKSH
Sbjct: 1   MAISSLSATSGLSSVLLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVRLGKSH 60

Query: 61  SQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLDDGGTGF 120
           SQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLDDGGTGF
Sbjct: 61  SQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLDDGGTGF 120

Query: 121 PPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRGR 171
           PPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKD+ENEGPYQDSRGR
Sbjct: 121 PPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDRENEGPYQDSRGR 170
[Close]
BLAST of Spo04387.1 vs. NCBI nr
Match: gi|902234360|gb|KNA23418.1| (hypothetical protein SOVF_025020 [Spinacia oleracea])

HSP 1 Score: 303.1 bits (775), Expect = 3.000e-79
Identity = 163/176 (92.61%), Postives = 166/176 (94.32%), Query Frame = 1 

		  

Query: 1   MAISSLSATSGLSSVLL-SPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVRLGK- 60
           MAISSLSATSGLS+VLL SPVRFDLPRRGPLKHHNH VAGLGK SFGL+REQQLVRLGK 
Sbjct: 1   MAISSLSATSGLSAVLLLSPVRFDLPRRGPLKHHNHGVAGLGKASFGLHREQQLVRLGKL 60

Query: 61  ----SHSQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLD 120
               SH QRSTPTTRVRSASVVCSAALNA+CGAEGQTQTVEKPTSVISNAPGKEKSPLLD
Sbjct: 61  SLCLSHIQRSTPTTRVRSASVVCSAALNARCGAEGQTQTVEKPTSVISNAPGKEKSPLLD 120

Query: 121 DGGTGFPPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRGR 171
           DGGTGFPPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSR R
Sbjct: 121 DGGTGFPPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRRR 176
[Close]
BLAST of Spo04387.1 vs. NCBI nr
Match: gi|731347523|ref|XP_010685030.1| (PREDICTED: uncharacterized protein LOC104899524 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 259.2 bits (661), Expect = 4.900e-66
Identity = 139/175 (79.43%), Postives = 156/175 (89.14%), Query Frame = 1 

		  

Query: 1   MAISSLSATSGLSSVLLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVRLGK-- 60
           MAISSLSATSG+++ L  PV+F+LPRRGP+KH+NH V GLG+VSF LNREQ LVRLGK  
Sbjct: 1   MAISSLSATSGVTAALFPPVKFELPRRGPVKHYNHGVGGLGRVSFCLNREQ-LVRLGKLS 60

Query: 61  ---SHSQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLDD 120
              S +Q+ T  TRVRSAS+VCSAALNA+CGAEGQTQTVEKP SVIS+APGKEKSPLLDD
Sbjct: 61  LCSSRNQKLTSITRVRSASLVCSAALNARCGAEGQTQTVEKPVSVISHAPGKEKSPLLDD 120

Query: 121 GGTGFPPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRGR 171
           GGTGFPPRDDDGGGGGGGGGGGN+SGGFFFFGFLAFLGFLKD+E+EG Y+DSR R
Sbjct: 121 GGTGFPPRDDDGGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDQESEGSYRDSRRR 174
[Close]
BLAST of Spo04387.1 vs. NCBI nr
Match: gi|870866977|gb|KMT17889.1| (hypothetical protein BVRB_2g034200 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 236.5 bits (602), Expect = 3.400e-59
Identity = 134/175 (76.57%), Postives = 145/175 (82.86%), Query Frame = 1 

		  

Query: 1   MAISSLSATSGLSSVLLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVR----- 60
           MAISS S+TSG+SS++ SP RF+L +   LKH NH VAGLG+  F LN EQQL R     
Sbjct: 3   MAISSFSSTSGVSSLVSSPARFELSK---LKHCNHGVAGLGR-PFCLNCEQQLARPVKLS 62

Query: 61  LGKSHSQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLDD 120
           L  SH+QR TP   VR ASVVCSAALNA+CGAEGQTQTVEKP SVIS+APGKEKSP LDD
Sbjct: 63  LRVSHNQRLTPKAGVRPASVVCSAALNARCGAEGQTQTVEKPVSVISHAPGKEKSPQLDD 122

Query: 121 GGTGFPPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRGR 171
           GGTGFPPRDDDGGGGGGGGGGGN+ GGFFFFGFLAFLGFLKDKENEGPYQDSR R
Sbjct: 123 GGTGFPPRDDDGGGGGGGGGGGNWRGGFFFFGFLAFLGFLKDKENEGPYQDSRRR 173
[Close]
BLAST of Spo04387.1 vs. NCBI nr
Match: gi|731317745|ref|XP_010669349.1| (PREDICTED: uncharacterized protein LOC104886588 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 236.5 bits (602), Expect = 3.400e-59
Identity = 134/175 (76.57%), Postives = 145/175 (82.86%), Query Frame = 1 

		  

Query: 1   MAISSLSATSGLSSVLLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVR----- 60
           MAISS S+TSG+SS++ SP RF+L +   LKH NH VAGLG+  F LN EQQL R     
Sbjct: 20  MAISSFSSTSGVSSLVSSPARFELSK---LKHCNHGVAGLGR-PFCLNCEQQLARPVKLS 79

Query: 61  LGKSHSQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLDD 120
           L  SH+QR TP   VR ASVVCSAALNA+CGAEGQTQTVEKP SVIS+APGKEKSP LDD
Sbjct: 80  LRVSHNQRLTPKAGVRPASVVCSAALNARCGAEGQTQTVEKPVSVISHAPGKEKSPQLDD 139

Query: 121 GGTGFPPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRGR 171
           GGTGFPPRDDDGGGGGGGGGGGN+ GGFFFFGFLAFLGFLKDKENEGPYQDSR R
Sbjct: 140 GGTGFPPRDDDGGGGGGGGGGGNWRGGFFFFGFLAFLGFLKDKENEGPYQDSRRR 190
[Close]
BLAST of Spo04387.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RE96_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_076800 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 3.900e-86
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 1   MAISSLSATSGLSSVLLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVRLGKSH 60
           MAISSLSATSGLSSVLLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVRLGKSH
Sbjct: 1   MAISSLSATSGLSSVLLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVRLGKSH 60

Query: 61  SQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLDDGGTGF 120
           SQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLDDGGTGF
Sbjct: 61  SQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLDDGGTGF 120

Query: 121 PPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRGR 171
           PPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKD+ENEGPYQDSRGR
Sbjct: 121 PPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDRENEGPYQDSRGR 170
[Close]
BLAST of Spo04387.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RVC9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_025020 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 2.100e-79
Identity = 163/176 (92.61%), Postives = 166/176 (94.32%), Query Frame = 1 

		  

Query: 1   MAISSLSATSGLSSVLL-SPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVRLGK- 60
           MAISSLSATSGLS+VLL SPVRFDLPRRGPLKHHNH VAGLGK SFGL+REQQLVRLGK 
Sbjct: 1   MAISSLSATSGLSAVLLLSPVRFDLPRRGPLKHHNHGVAGLGKASFGLHREQQLVRLGKL 60

Query: 61  ----SHSQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLD 120
               SH QRSTPTTRVRSASVVCSAALNA+CGAEGQTQTVEKPTSVISNAPGKEKSPLLD
Sbjct: 61  SLCLSHIQRSTPTTRVRSASVVCSAALNARCGAEGQTQTVEKPTSVISNAPGKEKSPLLD 120

Query: 121 DGGTGFPPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRGR 171
           DGGTGFPPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSR R
Sbjct: 121 DGGTGFPPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRRR 176
[Close]
BLAST of Spo04387.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C010_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g167760 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.400e-66
Identity = 139/175 (79.43%), Postives = 156/175 (89.14%), Query Frame = 1 

		  

Query: 1   MAISSLSATSGLSSVLLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVRLGK-- 60
           MAISSLSATSG+++ L  PV+F+LPRRGP+KH+NH V GLG+VSF LNREQ LVRLGK  
Sbjct: 1   MAISSLSATSGVTAALFPPVKFELPRRGPVKHYNHGVGGLGRVSFCLNREQ-LVRLGKLS 60

Query: 61  ---SHSQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLDD 120
              S +Q+ T  TRVRSAS+VCSAALNA+CGAEGQTQTVEKP SVIS+APGKEKSPLLDD
Sbjct: 61  LCSSRNQKLTSITRVRSASLVCSAALNARCGAEGQTQTVEKPVSVISHAPGKEKSPLLDD 120

Query: 121 GGTGFPPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRGR 171
           GGTGFPPRDDDGGGGGGGGGGGN+SGGFFFFGFLAFLGFLKD+E+EG Y+DSR R
Sbjct: 121 GGTGFPPRDDDGGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDQESEGSYRDSRRR 174
[Close]
BLAST of Spo04387.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D0M0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g034200 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.400e-59
Identity = 134/175 (76.57%), Postives = 145/175 (82.86%), Query Frame = 1 

		  

Query: 1   MAISSLSATSGLSSVLLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVR----- 60
           MAISS S+TSG+SS++ SP RF+L +   LKH NH VAGLG+  F LN EQQL R     
Sbjct: 3   MAISSFSSTSGVSSLVSSPARFELSK---LKHCNHGVAGLGR-PFCLNCEQQLARPVKLS 62

Query: 61  LGKSHSQRSTPTTRVRSASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLDD 120
           L  SH+QR TP   VR ASVVCSAALNA+CGAEGQTQTVEKP SVIS+APGKEKSP LDD
Sbjct: 63  LRVSHNQRLTPKAGVRPASVVCSAALNARCGAEGQTQTVEKPVSVISHAPGKEKSPQLDD 122

Query: 121 GGTGFPPRDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRGR 171
           GGTGFPPRDDDGGGGGGGGGGGN+ GGFFFFGFLAFLGFLKDKENEGPYQDSR R
Sbjct: 123 GGTGFPPRDDDGGGGGGGGGGGNWRGGFFFFGFLAFLGFLKDKENEGPYQDSRRR 173
[Close]
BLAST of Spo04387.1 vs. UniProtKB/TrEMBL
Match: A0A0L9VB23_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g092400 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.000e-33
Identity = 100/168 (59.52%), Postives = 112/168 (66.67%), Query Frame = 1 

		  

Query: 8   ATSGLSSV-LLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVRLGKSHSQRSTP 67
           ATS ++S+ +L PVR    R G   HHN    G    S  L R        KS S    P
Sbjct: 3   ATSAVTSLPVLPPVR----RGG---HHNEQNVG---TSLSLPRLSWTTNNSKSPSCAQFP 62

Query: 68  T-TRVRS---ASVVCSAALNAKCGAEGQTQTVEKPTSVISNAPGKEKSPLLDDGGTGFPP 127
             TR RS   A+++CSAALNA+CGAE QTQTV +    I++ PGKEKSP LDDGGTGFPP
Sbjct: 63  FGTRARSPQTATIICSAALNARCGAE-QTQTVTREAPTITHIPGKEKSPQLDDGGTGFPP 122

Query: 128 RDDDGGGGGGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRGR 171
           RDDD GGGGGGGGGGN+SGGFFFFGFLAFLGFLKDKE E  Y D R R
Sbjct: 123 RDDDDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKETEDTYGDDRRR 159
[Close]
BLAST of Spo04387.1 vs. TAIR (Arabidopsis)
Match: AT1G56200.1 (embryo defective 1303)

HSP 1 Score: 122.9 bits (307), Expect = 2.000e-28
Identity = 82/160 (51.25%), Postives = 101/160 (63.12%), Query Frame = 1 

		  

Query: 13  SSVLLSPVRFDLPRRGPLKHHNHAVAGLGKVSFGLNREQQLVRLGKSHSQRSTPTTRVRS 72
           S +  SP+ F+     P  H + ++ G+       NR   L  +G S    S      R 
Sbjct: 6   SIIQSSPLSFNSNNAKPRIHSSGSLGGIKSQ----NRVSPLSAVGLSSGLGSR-----RK 65

Query: 73  ASVVCSAALNAKCGAEGQTQTVEKPTSVISNAP--GKEKSPLLDDGGTGFPPRDDDGGGG 132
           + ++C +A+NAKC +EGQTQTV + +  I+ AP   KEKSP LDDGG GFPPR DDG GG
Sbjct: 66  SLLICHSAINAKC-SEGQTQTVTRESPTITQAPVHSKEKSPSLDDGGDGFPPR-DDGDGG 125

Query: 133 GGGGGGGNYSGGFFFFGFLAFLGFLKDKENEGPYQDSRGR 171
           GGGGGGGN+SGGFFFFGFLAFLG LKDKE E  Y+ SR R
Sbjct: 126 GGGGGGGNWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR 154
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BLAST of Spo04387.1 vs. TAIR (Arabidopsis)
Match: AT1G30475.1 (BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1))

HSP 1 Score: 102.1 bits (253), Expect = 3.600e-22
Identity = 59/87 (67.82%), Postives = 70/87 (80.46%), Query Frame = 1 

		  

Query: 77  CSAALNAKCGAEGQTQTVEKPTSVISNAP--GKEKSPLLDDGGTGFPPRDDDGGGGGGGG 136
           C++ALN+KC ++GQTQTV + +  I+ AP  GK KSP LDDGG GFPPR DDGGGGGGGG
Sbjct: 102 CNSALNSKC-SQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGNGFPPR-DDGGGGGGGG 161

Query: 137 GGGNYSGGFFFFGFLAFLGFLKDKENE 162
           GGG+ SGGFF FGFL F+G+LKD E E
Sbjct: 162 GGGSSSGGFFLFGFLLFMGYLKDLEGE 186
The following BLAST results are available for this feature:
BLAST of Spo04387.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902217594|gb|KNA17783.1|5.6e-8699.4hypothetical protein SOVF_0768... [more]
gi|902234360|gb|KNA23418.1|3.0e-7992.6hypothetical protein SOVF_0250... [more]
gi|731347523|ref|XP_010685030.1|4.9e-6679.4PREDICTED: uncharacterized pro... [more]
gi|870866977|gb|KMT17889.1|3.4e-5976.5hypothetical protein BVRB_2g03... [more]
gi|731317745|ref|XP_010669349.1|3.4e-5976.5PREDICTED: uncharacterized pro... [more]
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BLAST of Spo04387.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RE96_SPIOL3.9e-8699.4Uncharacterized protein OS=Spi... [more]
A0A0K9RVC9_SPIOL2.1e-7992.6Uncharacterized protein OS=Spi... [more]
A0A0J8C010_BETVU3.4e-6679.4Uncharacterized protein OS=Bet... [more]
A0A0J8D0M0_BETVU2.4e-5976.5Uncharacterized protein OS=Bet... [more]
A0A0L9VB23_PHAAN5.0e-3359.5Uncharacterized protein OS=Pha... [more]
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BLAST of Spo04387.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04387.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G56200.12.0e-2851.2embryo defective 1303[more]
AT1G30475.13.6e-2267.8BEST Arabidopsis thaliana prot... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34938FAMILY NOT NAMEDcoord: 40..168
score: 7.8
NoneNo IPR availablePANTHERPTHR34938:SF1SUBFAMILY NOT NAMEDcoord: 40..168
score: 7.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001510 RNA methylation
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0009407 toxin catabolic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0009636 response to toxic substance
biological_process GO:0010583 response to cyclopentenone
biological_process GO:0010731 protein glutathionylation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0015979 photosynthesis
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0006508 proteolysis
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006754 ATP biosynthetic process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0009941 chloroplast envelope
molecular_function GO:0004364 glutathione transferase activity
molecular_function GO:0045174 glutathione dehydrogenase (ascorbate) activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0005515 protein binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo005380.85Barchart | Table
Spo108170.81Barchart | Table
Spo134280.78Barchart | Table
Spo108200.78Barchart | Table
Spo230670.77Barchart | Table
Spo094600.76Barchart | Table
Spo272360.76Barchart | Table
Spo255030.76Barchart | Table
Spo007540.76Barchart | Table
Spo156080.76Barchart | Table
Spo217160.75Barchart | Table
Spo019670.75Barchart | Table
Spo150920.73Barchart | Table
Spo103000.72Barchart | Table
Spo123790.72Barchart | Table
Spo030060.72Barchart | Table
Spo084970.71Barchart | Table
Spo181430.71Barchart | Table
Spo152440.71Barchart | Table
Spo247710.71Barchart | Table
Spo116820.71Barchart | Table
Spo049590.71Barchart | Table
Spo243070.70Barchart | Table
Spo047890.70Barchart | Table
Spo113360.70Barchart | Table
Spo238740.70Barchart | Table
Spo269070.70Barchart | Table
Spo263130.69Barchart | Table
Spo032130.69Barchart | Table
Spo049700.69Barchart | Table
Spo163920.69Barchart | Table
Spo251750.69Barchart | Table
Spo237090.68Barchart | Table
Spo239210.68Barchart | Table
Spo193050.68Barchart | Table
Spo081980.67Barchart | Table
Spo148660.67Barchart | Table
Spo011830.67Barchart | Table
Spo023810.67Barchart | Table
Spo020490.67Barchart | Table
Spo012240.67Barchart | Table
Spo094690.67Barchart | Table
Spo182200.66Barchart | Table
Spo073150.66Barchart | Table
Spo194070.66Barchart | Table
Spo069360.66Barchart | Table
Spo087120.66Barchart | Table
Spo067180.66Barchart | Table
Spo057080.66Barchart | Table
Spo060450.65Barchart | Table
Spo116290.65Barchart | Table
Spo058100.65Barchart | Table
Spo067140.65Barchart | Table