Spo04394 (gene)

Overview
NameSpo04394
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionMADS-box transcription factor 21
Locationchr3 : 2808312 .. 2808941 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTAGCAAAAACCCCCCATGTGAAAAAGGCAAAGAAGAAGCAGGTGAAGGACGAGTTAGACCGCATGAAGCAAGCAGAGAAGAAAAGAAGAAGATTAGAGAAAGCCTTGGCAACTTCTGCTGCCATTCGTTCTGAACTTGAGAAAAAGAAACAACTTAAGAAAGAAGAGCAACAAAGGCTCGACGAAGAGGGTGCTGCAATTGCTGAAGCAGTTGCTCTCCATGTTTTACTTGGAGAAGACTCCGATGACACGACGCCTACTACAATAGTTTTGAAAAAAGAGGAAGAAGAAGACGACTTTGGCGGTTGGCACCACCACCACGCTGCTGCAAATATCGGACTTTTTATGGAGAAATCCGGTTTTTCACATCATCAGAAGAGTTTAAAGAAATATTCCGTTGTTGAGAGTGTTGGCTGGTTTCCGGGATCTTATGGACAACAAGAATGTGATTGCAATCACTTTGGAGATATCAATATCAATCGGTCCTATTCATCGTCATTTCCTCTCGAGAATAACTTCCAGATGTCGTATTTGGATGATGGTCTCCTTGCAGCACAAGCTGTTTCATCACTGCAGATTGGAGAAGATGCACGCGTTGACAGACTTTTCTTCAACCGATATTGA

mRNA sequence

ATGGAGTTAGCAAAAACCCCCCATGTGAAAAAGGCAAAGAAGAAGCAGGTGAAGGACGAGTTAGACCGCATGAAGCAAGCAGAGAAGAAAAGAAGAAGATTAGAGAAAGCCTTGGCAACTTCTGCTGCCATTCGTTCTGAACTTGAGAAAAAGAAACAACTTAAGAAAGAAGAGCAACAAAGGCTCGACGAAGAGGGTGCTGCAATTGCTGAAGCAGTTGCTCTCCATGTTTTACTTGGAGAAGACTCCGATGACACGACGCCTACTACAATAGTTTTGAAAAAAGAGGAAGAAGAAGACGACTTTGGCGGTTGGCACCACCACCACGCTGCTGCAAATATCGGACTTTTTATGGAGAAATCCGGTTTTTCACATCATCAGAAGAGTTTAAAGAAATATTCCGTTGTTGAGAGTGTTGGCTGGTTTCCGGGATCTTATGGACAACAAGAATGTGATTGCAATCACTTTGGAGATATCAATATCAATCGGTCCTATTCATCGTCATTTCCTCTCGAGAATAACTTCCAGATGTCGTATTTGGATGATGGTCTCCTTGCAGCACAAGCTGTTTCATCACTGCAGATTGGAGAAGATGCACGCGTTGACAGACTTTTCTTCAACCGATATTGA

Coding sequence (CDS)

ATGGAGTTAGCAAAAACCCCCCATGTGAAAAAGGCAAAGAAGAAGCAGGTGAAGGACGAGTTAGACCGCATGAAGCAAGCAGAGAAGAAAAGAAGAAGATTAGAGAAAGCCTTGGCAACTTCTGCTGCCATTCGTTCTGAACTTGAGAAAAAGAAACAACTTAAGAAAGAAGAGCAACAAAGGCTCGACGAAGAGGGTGCTGCAATTGCTGAAGCAGTTGCTCTCCATGTTTTACTTGGAGAAGACTCCGATGACACGACGCCTACTACAATAGTTTTGAAAAAAGAGGAAGAAGAAGACGACTTTGGCGGTTGGCACCACCACCACGCTGCTGCAAATATCGGACTTTTTATGGAGAAATCCGGTTTTTCACATCATCAGAAGAGTTTAAAGAAATATTCCGTTGTTGAGAGTGTTGGCTGGTTTCCGGGATCTTATGGACAACAAGAATGTGATTGCAATCACTTTGGAGATATCAATATCAATCGGTCCTATTCATCGTCATTTCCTCTCGAGAATAACTTCCAGATGTCGTATTTGGATGATGGTCTCCTTGCAGCACAAGCTGTTTCATCACTGCAGATTGGAGAAGATGCACGCGTTGACAGACTTTTCTTCAACCGATATTGA

Protein sequence

MELAKTPHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQRLDEEGAAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEKSGFSHHQKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYLDDGLLAAQAVSSLQIGEDARVDRLFFNRY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04394.1Spo04394.1mRNA


Homology
[Close]
BLAST of Spo04394.1 vs. NCBI nr
Match: gi|902231298|gb|KNA22212.1| (hypothetical protein SOVF_036110 [Spinacia oleracea])

HSP 1 Score: 404.1 bits (1037), Expect = 1.500e-109
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1 

		  

Query: 1   MELAKTPHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQ 60
           MELAKTPHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQ
Sbjct: 1   MELAKTPHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQ 60

Query: 61  RLDEEGAAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEK 120
           RLDEEGAAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEK
Sbjct: 61  RLDEEGAAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEK 120

Query: 121 SGFSHHQKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYL 180
           SGFSHHQKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYL
Sbjct: 121 SGFSHHQKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYL 180

Query: 181 DDGLLAAQAVSSLQIGEDARVDRLFFNRY 210
           DDGLLAAQAVSSLQIGEDARVDRLFFNRY
Sbjct: 181 DDGLLAAQAVSSLQIGEDARVDRLFFNRY 209
[Close]
BLAST of Spo04394.1 vs. NCBI nr
Match: gi|731321966|ref|XP_010671633.1| (PREDICTED: uncharacterized protein LOC104888379 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 260.0 bits (663), Expect = 3.600e-66
Identity = 160/219 (73.06%), Postives = 173/219 (79.00%), Query Frame = 1 

		  

Query: 1   MELAKTPHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQ 60
           ME AK P VKKAKKKQVKDELDR+KQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQ
Sbjct: 1   MESAKPPIVKKAKKKQVKDELDRIKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQ 60

Query: 61  RLDEEGAAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEK 120
           RLDEEGAAIAEAVALHVLLGEDSDDT   TIVL+KE   DDFGGWHH   AANIG+FM K
Sbjct: 61  RLDEEGAAIAEAVALHVLLGEDSDDTP--TIVLEKE---DDFGGWHH---AANIGIFMNK 120

Query: 121 SGFSHHQKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYL 180
           S  S  Q++LK+ S  ESVGWFPG+YGQ EC+ NHFGDI+      SSFPLE NF + YL
Sbjct: 121 SALS--QQNLKQCSF-ESVGWFPGTYGQ-ECEWNHFGDIS---QPFSSFPLEKNFHLPYL 180

Query: 181 DDG----------LLAAQAVSSLQIGEDARVDRLFFNRY 210
           +DG          L+AAQAVSSL I ED   DR+FFNRY
Sbjct: 181 EDGPWSHDDISAGLIAAQAVSSLHIEEDVHADRIFFNRY 204
[Close]
BLAST of Spo04394.1 vs. NCBI nr
Match: gi|747059456|ref|XP_011076111.1| (PREDICTED: uncharacterized protein LOC105160439 [Sesamum indicum])

HSP 1 Score: 165.2 bits (417), Expect = 1.200e-37
Identity = 119/218 (54.59%), Postives = 147/218 (67.43%), Query Frame = 1 

		  

Query: 1   MELAK-TPHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQ 60
           ME AK T  V+KAKKKQVKDELDR+KQAEKK+RRLEKALATSAAIRSELEKKKQ KKEEQ
Sbjct: 1   MEGAKVTAGVRKAKKKQVKDELDRIKQAEKKKRRLEKALATSAAIRSELEKKKQKKKEEQ 60

Query: 61  QRLDEEGAAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFME 120
           +RLDEEGAAIAEAVALHVLLGEDSDD+  + ++LKK+E       W H   A+N+ +F+ 
Sbjct: 61  ERLDEEGAAIAEAVALHVLLGEDSDDS--SKLMLKKDE---GLTSWDH---ASNMDIFVG 120

Query: 121 KSGFSHHQKSLKKYSVVESVGWF--PGSYGQQECDCNHFGDIN-------INRSYSSSFP 180
                   + L K S  E++GW   P  YG+     N++G+ N       + + +   + 
Sbjct: 121 ARRAVVPHQDLSKNS-CENIGWVSDPHRYGRV---WNYWGNSNLMVSSDSLGKEFCPQYF 180

Query: 181 LENNFQMSYLDDGLLAAQAVSSLQIGEDARVDRLFFNR 209
            E+ +    L  G LAAQAVSSL+I +DARVD   FNR
Sbjct: 181 REDGWGSVGLSAGHLAAQAVSSLKIADDARVDAYVFNR 206
[Close]
BLAST of Spo04394.1 vs. NCBI nr
Match: gi|566210722|ref|XP_006372439.1| (hypothetical protein POPTR_0017s01640g [Populus trichocarpa])

HSP 1 Score: 163.3 bits (412), Expect = 4.500e-37
Identity = 117/211 (55.45%), Postives = 134/211 (63.51%), Query Frame = 1 

		  

Query: 7   PHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQRLDEEG 66
           P V+K KKKQVK E+DR++QAEKK+RRLEKALATSAAIRSELEKKKQ KKEEQQRLDEEG
Sbjct: 11  PVVRKVKKKQVKGEMDRLRQAEKKKRRLEKALATSAAIRSELEKKKQKKKEEQQRLDEEG 70

Query: 67  AAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEKSGFSHH 126
           AAIAEAVALHVLLGEDSDD+    IVL KEE    F  W     A NI LF+ +   S  
Sbjct: 71  AAIAEAVALHVLLGEDSDDS--CKIVLNKEEV---FNTW---SCAGNIDLFVGEKRPSLP 130

Query: 127 QKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYLDD---- 186
            K     S  E +GW P +YG   C      + ++  SY S   L  +  + Y DD    
Sbjct: 131 HKDCSGNS-FERIGWVPCTYG-TGCQWGERENNDLTFSYES---LRRSMPVQYFDDGSWG 190

Query: 187 ------GLLAAQAVSSLQIGEDARVDRLFFN 208
                 GL+AAQAVSSLQI EDA  D   F+
Sbjct: 191 TTEFSAGLIAAQAVSSLQIAEDAHGDTFLFD 208
[Close]
BLAST of Spo04394.1 vs. NCBI nr
Match: gi|743888208|ref|XP_011038377.1| (PREDICTED: uncharacterized protein LOC105135272 [Populus euphratica])

HSP 1 Score: 162.9 bits (411), Expect = 5.900e-37
Identity = 116/211 (54.98%), Postives = 135/211 (63.98%), Query Frame = 1 

		  

Query: 7   PHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQRLDEEG 66
           P V+K KKKQVK E+DR++QAEKK+RRLEKALATSAAIRSELEKKKQ KKEEQQRLDEEG
Sbjct: 11  PVVRKVKKKQVKGEMDRLRQAEKKKRRLEKALATSAAIRSELEKKKQKKKEEQQRLDEEG 70

Query: 67  AAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEKSGFSHH 126
           AAIAEAVALHVLLGEDSDD+    IVL KEE  D +        A NI LF+ +   S  
Sbjct: 71  AAIAEAVALHVLLGEDSDDS--CKIVLNKEEVFDTWS------CAGNIDLFVGEKRPSLP 130

Query: 127 QKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYLDD---- 186
            +     S  E +GW P +YG   C      + ++  SY S   L  +  + YLDD    
Sbjct: 131 HEDFPGNS-FERIGWVPCTYG-TGCQWRRRENNDLTFSYDS---LRRSMPVQYLDDGSWG 190

Query: 187 ------GLLAAQAVSSLQIGEDARVDRLFFN 208
                 GL+AAQAVSSLQI EDA  D   F+
Sbjct: 191 TAEFSAGLIAAQAVSSLQIAEDAHGDTFLFD 208
[Close]
BLAST of Spo04394.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTS7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_036110 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.100e-109
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1 

		  

Query: 1   MELAKTPHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQ 60
           MELAKTPHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQ
Sbjct: 1   MELAKTPHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQ 60

Query: 61  RLDEEGAAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEK 120
           RLDEEGAAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEK
Sbjct: 61  RLDEEGAAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEK 120

Query: 121 SGFSHHQKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYL 180
           SGFSHHQKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYL
Sbjct: 121 SGFSHHQKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYL 180

Query: 181 DDGLLAAQAVSSLQIGEDARVDRLFFNRY 210
           DDGLLAAQAVSSLQIGEDARVDRLFFNRY
Sbjct: 181 DDGLLAAQAVSSLQIGEDARVDRLFFNRY 209
[Close]
BLAST of Spo04394.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CW62_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053480 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.500e-66
Identity = 160/219 (73.06%), Postives = 173/219 (79.00%), Query Frame = 1 

		  

Query: 1   MELAKTPHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQ 60
           ME AK P VKKAKKKQVKDELDR+KQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQ
Sbjct: 1   MESAKPPIVKKAKKKQVKDELDRIKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQ 60

Query: 61  RLDEEGAAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEK 120
           RLDEEGAAIAEAVALHVLLGEDSDDT   TIVL+KE   DDFGGWHH   AANIG+FM K
Sbjct: 61  RLDEEGAAIAEAVALHVLLGEDSDDTP--TIVLEKE---DDFGGWHH---AANIGIFMNK 120

Query: 121 SGFSHHQKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYL 180
           S  S  Q++LK+ S  ESVGWFPG+YGQ EC+ NHFGDI+      SSFPLE NF + YL
Sbjct: 121 SALS--QQNLKQCSF-ESVGWFPGTYGQ-ECEWNHFGDIS---QPFSSFPLEKNFHLPYL 180

Query: 181 DDG----------LLAAQAVSSLQIGEDARVDRLFFNRY 210
           +DG          L+AAQAVSSL I ED   DR+FFNRY
Sbjct: 181 EDGPWSHDDISAGLIAAQAVSSLHIEEDVHADRIFFNRY 204
[Close]
BLAST of Spo04394.1 vs. UniProtKB/TrEMBL
Match: B9MX08_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s01640g PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.200e-37
Identity = 117/211 (55.45%), Postives = 134/211 (63.51%), Query Frame = 1 

		  

Query: 7   PHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQRLDEEG 66
           P V+K KKKQVK E+DR++QAEKK+RRLEKALATSAAIRSELEKKKQ KKEEQQRLDEEG
Sbjct: 11  PVVRKVKKKQVKGEMDRLRQAEKKKRRLEKALATSAAIRSELEKKKQKKKEEQQRLDEEG 70

Query: 67  AAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEKSGFSHH 126
           AAIAEAVALHVLLGEDSDD+    IVL KEE    F  W     A NI LF+ +   S  
Sbjct: 71  AAIAEAVALHVLLGEDSDDS--CKIVLNKEEV---FNTW---SCAGNIDLFVGEKRPSLP 130

Query: 127 QKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYLDD---- 186
            K     S  E +GW P +YG   C      + ++  SY S   L  +  + Y DD    
Sbjct: 131 HKDCSGNS-FERIGWVPCTYG-TGCQWGERENNDLTFSYES---LRRSMPVQYFDDGSWG 190

Query: 187 ------GLLAAQAVSSLQIGEDARVDRLFFN 208
                 GL+AAQAVSSLQI EDA  D   F+
Sbjct: 191 TTEFSAGLIAAQAVSSLQIAEDAHGDTFLFD 208
[Close]
BLAST of Spo04394.1 vs. UniProtKB/TrEMBL
Match: K4BEM1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 9.200e-37
Identity = 112/221 (50.68%), Postives = 141/221 (63.80%), Query Frame = 1 

		  

Query: 1   MELAK-TPHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQ 60
           ME AK  P V+K KKKQVKDELDR+KQAEKK+RRLEKALATSAAIRSELEKKKQ KKEEQ
Sbjct: 1   MECAKMAPAVRKGKKKQVKDELDRIKQAEKKKRRLEKALATSAAIRSELEKKKQKKKEEQ 60

Query: 61  QRLDEEGAAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFME 120
           QRLDE+GAAIAEAVAL VLLGED+DD+    ++LKKEE      GW+     ++   F+ 
Sbjct: 61  QRLDEQGAAIAEAVALQVLLGEDTDDS--CKLLLKKEE------GWNTWDLNSSFDFFVG 120

Query: 121 KSGFSHHQKSLKKYSVVESVGWFPGSYGQQECDCNHFGDI------------NINRSYSS 180
           +      ++    Y  VE   W  G+ G + C  N +G+             +IN  Y  
Sbjct: 121 RGRPMLPRQDSSTYYSVEGADWVSGASGYR-CMSNEWGNSEWMVSSETWVRDDINHQYFD 180

Query: 181 SFPLENNFQMSYLDDGLLAAQAVSSLQIGEDARVDRLFFNR 209
               E N++++ +  G +AAQ++SSLQI EDA VD   FN+
Sbjct: 181 ----EGNWEVARISPGFIAAQSLSSLQIAEDAPVDSCVFNQ 208
[Close]
BLAST of Spo04394.1 vs. UniProtKB/TrEMBL
Match: A0A061G279_THECC (Transport protein SEC31 OS=Theobroma cacao GN=TCM_015242 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.700e-36
Identity = 114/211 (54.03%), Postives = 135/211 (63.98%), Query Frame = 1 

		  

Query: 7   PHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQRLDEEG 66
           P V+KAKKKQVKDELDR+KQAEKK+RRLEKALATSAAIRSELEKKKQ KKEEQQRLDEEG
Sbjct: 46  PVVRKAKKKQVKDELDRIKQAEKKKRRLEKALATSAAIRSELEKKKQKKKEEQQRLDEEG 105

Query: 67  AAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEKSGFSHH 126
           AAIAEAVALHVLLGEDSDD+    I+L KEE    F  W +   A+N  LFM +      
Sbjct: 106 AAIAEAVALHVLLGEDSDDS--CKIMLNKEE---GFNRWDY---ASNFDLFMGRG----- 165

Query: 127 QKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYLDD---- 186
           +  L   +     GW   +Y    C+    G+ + + SY +      +    YL+D    
Sbjct: 166 RACLPHQAHTNCEGWVSNAY-TAGCEWPELGNNDWSFSYGA---YGRDLHAPYLEDEGWG 225

Query: 187 ------GLLAAQAVSSLQIGEDARVDRLFFN 208
                 GL+AAQAVS+LQI EDA VD +  N
Sbjct: 226 SAGLSAGLIAAQAVSALQITEDAEVDTIVLN 239
[Close]
BLAST of Spo04394.1 vs. TAIR (Arabidopsis)
Match: AT4G25670.1 (unknown protein)

HSP 1 Score: 129.8 bits (325), Expect = 2.000e-30
Identity = 100/201 (49.75%), Postives = 125/201 (62.19%), Query Frame = 1 

		  

Query: 7   PHVKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQRLDEEG 66
           P V+KAKKK  KDE DR+KQAEKK+RRLEKALATSAAIR+ELEKKKQ + EEQQRLDEEG
Sbjct: 11  PVVRKAKKKHGKDEFDRIKQAEKKKRRLEKALATSAAIRAELEKKKQKRLEEQQRLDEEG 70

Query: 67  AAIAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEKSGFSHH 126
           AAIAEAVALHVLLGEDSDD++       K  EE  F           + LF ++      
Sbjct: 71  AAIAEAVALHVLLGEDSDDSSRV-----KFGEEKGF----------TMDLFRDERTNYVP 130

Query: 127 QKSLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFPLENNFQMSYLDDGLLA 186
           ++S   Y+ V+ +G+    YG         GD N +  ++     +NN  +S     L+A
Sbjct: 131 RQSCASYA-VQGIGFVSNGYG--------LGDSNWS-PFTRRGAWDNNMGIS---ADLIA 183

Query: 187 AQAVSSLQIGEDARVDRLFFN 208
           AQAVS+LQI E+A  +   FN
Sbjct: 191 AQAVSALQISENADGNAFVFN 183
[Close]
BLAST of Spo04394.1 vs. TAIR (Arabidopsis)
Match: AT4G25690.1 (unknown protein)

HSP 1 Score: 126.7 bits (317), Expect = 1.700e-29
Identity = 99/193 (51.30%), Postives = 119/193 (61.66%), Query Frame = 1 

		  

Query: 9   VKKAKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQRLDEEGAA 68
           V +  KK  KDE DR+KQAEKK+RRLEKALATSAAIR+ELEKKKQ + EEQQRLDEEGAA
Sbjct: 13  VTRKVKKHGKDEFDRIKQAEKKKRRLEKALATSAAIRAELEKKKQKRLEEQQRLDEEGAA 72

Query: 69  IAEAVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEKSGFSHHQK 128
           IAEAVALHVLLGEDSDD++       K  EE  FG          + LF ++      ++
Sbjct: 73  IAEAVALHVLLGEDSDDSSRV-----KFGEETGFG----------MDLFRDERTNYVPRQ 132

Query: 129 SLKKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFP--LENNFQMSYLDDGLLA 188
           S   Y+ V+ +G+    YG         GD N + SY        +NN  +S     L+A
Sbjct: 133 SCASYA-VQGIGFVSNGYG--------LGDSNWSVSYKPFMKDVWDNNMVIS---ADLIA 178

Query: 189 AQAVSSLQIGEDA 200
           AQAVSSLQI EDA
Sbjct: 193 AQAVSSLQISEDA 178
[Close]
BLAST of Spo04394.1 vs. TAIR (Arabidopsis)
Match: AT5G52550.1 (unknown protein)

HSP 1 Score: 114.0 bits (284), Expect = 1.100e-25
Identity = 91/199 (45.73%), Postives = 114/199 (57.29%), Query Frame = 1 

		  

Query: 12  AKKKQVKDELDRMKQAEKKRRRLEKALATSAAIRSELEKKKQLKKEEQQRLDEEGAAIAE 71
           AKKKQ ++EL+R+KQAE+K+RR+EK++ATSAAIR+ELEKKK  K EEQ+RLDEEGAAIAE
Sbjct: 181 AKKKQEREELERIKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEGAAIAE 240

Query: 72  AVALHVLLGEDSDDTTPTTIVLKKEEEEDDFGGWHHHHAAANIGLFMEK-SGFSHHQKSL 131
           AVALHVLLGED DD+   T+      +E  F  W +      I LF    + F  HQ+  
Sbjct: 241 AVALHVLLGEDCDDSYRNTL-----NQETGFKPWDY---TTKINLFSGGINRFFPHQR-C 300

Query: 132 KKYSVVESVGWFPGSYGQQECDCNHFGDININRSYSSSFP--LENNFQMSYLDDGLLAAQ 191
             Y+V                D N   D N +      F    +NN     +   L   Q
Sbjct: 301 SSYAV---------------HDNNRTRDSNWSSVSYEPFARGWDNNNNNMGISADLFDTQ 355

Query: 192 AVSSLQIGEDARVDRLFFN 208
           AVSSLQI E+  VD + FN
Sbjct: 361 AVSSLQISENTDVDAIVFN 355
The following BLAST results are available for this feature:
BLAST of Spo04394.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902231298|gb|KNA22212.1|1.5e-109100.hypothetical protein SOVF_0361... [more]
gi|731321966|ref|XP_010671633.1|3.6e-6673.0PREDICTED: uncharacterized pro... [more]
gi|747059456|ref|XP_011076111.1|1.2e-3754.5PREDICTED: uncharacterized pro... [more]
gi|566210722|ref|XP_006372439.1|4.5e-3755.4hypothetical protein POPTR_001... [more]
gi|743888208|ref|XP_011038377.1|5.9e-3754.9PREDICTED: uncharacterized pro... [more]
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BLAST of Spo04394.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RTS7_SPIOL1.1e-109100.Uncharacterized protein OS=Spi... [more]
A0A0J8CW62_BETVU2.5e-6673.0Uncharacterized protein OS=Bet... [more]
B9MX08_POPTR3.2e-3755.4Uncharacterized protein OS=Pop... [more]
K4BEM1_SOLLC9.2e-3750.6Uncharacterized protein OS=Sol... [more]
A0A061G279_THECC2.7e-3654.0Transport protein SEC31 OS=The... [more]
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BLAST of Spo04394.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04394.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G25670.12.0e-3049.7unknown protein[more]
AT4G25690.11.7e-2951.3unknown protein[more]
AT5G52550.11.1e-2545.7unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 10..68
scor
NoneNo IPR availablePANTHERPTHR34212FAMILY NOT NAMEDcoord: 6..207
score: 3.5
NoneNo IPR availablePANTHERPTHR34212:SF1SUBFAMILY NOT NAMEDcoord: 6..207
score: 3.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006812 cation transport
biological_process GO:0034655 nucleobase-containing compound catabolic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006260 DNA replication
biological_process GO:0006281 DNA repair
biological_process GO:0044265 cellular macromolecule catabolic process
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0031981 nuclear lumen
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
molecular_function GO:0008324 cation transmembrane transporter activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0046872 metal ion binding
RNA-Seq Expression