Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAAAGGATTAACAGAAGTCCAGGAGAGAAAGAATCACTTCATGCTGTTTACAAAGTTCCTTCTGGTGATGGCCCTTATGTTCGTGCCAAACATGCCCAGGTAATTTTTTTTACTTCCTTTATTTTTCTTTTTTCTTTTTACTTTTTCTTAAATTAAATAAAATAAATGAATATTGGATAACATTTATGGAGTAAAAATTGTGATTCATGAAGAAATGCATTGTACATTTGTACTATCAAAACTTTCTCCCTGTGAAATGCATCGTTGTCATACAATTGGTTGTATTGTCCGGCCATGACTAAAAAAATAGTTTTGATTTTTATCGTACGGTTTGTACTTTGTAAATAGTTGTAAACTTAACGATTTTGTGCAATGTGATGTAGCATAGATTTAGTTACCTAAGTTTTAATTCAAAAATCATCATTAGAGTTATTTTTTGTATCCTCCGATCCTTATTCCTTAGTGGTAGACAATTAAATTAGATGGCAAACTTTAGCGGTAGATTTACACCGATTAACTTAGTTGGTAAAATTTTGGAGAGTGGTATCGACAATTTGGAATGAAATCTCGTTTTTATCAATGCATTTAATCTTGTAATTTCCTAAGGACCAAATTATTCATACCTAAGCTATTACTCCGTATGATTTATGAACTCTTATTTGTAATTAATTTATGGGTATTTAAAGACAAATGAGGAATAGATAGGTGACACCAATTAGTTAGTCATTCTTTTATATTAATCTAAAATCTGATATAAATTTTGATTCAAAATCCCATACTAATATATTTTAAACTAATATATACTCCGTATATAGCTTACTTTATAAGCATGTAATTGTAAATATGCCATCCGAAATGATGATTCAGGTTGTCCGCCTGATTTTCTTTCCTATTAAAATAAATAACTACTTGGTATGTGATTCTAAATGTTGCATGATAAGTTAATTTATTTGAGTCAAAAGTCAGGAAAAACAATAGATTAATTAGTGTTTTGTATATTTGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGTGTGGAAATGGATCAGCTGGTGCAAAAGGATCCAGAAGCAGCAATAGTACTATTTTGGAAGGCTATAAATGCAGGGGATAGAGTGGATAGTGCACTGAAAGATATGGCAGTTGTTATGAAGCAACTTGATAGAACTGAAGAGGCTATTGAAGCTATTATGTCTTTTAGAGGCCTTTGTTCTAGGAATGCTCAAGAATCACTCGACAACGTCCTCATCGATTTGTATAAGGTATTCTAAATTCTTCTATTTTATGATGATGAATTTCTTTCTAAACAACAAGCTAATTAAAGAGTATGCTTCAATACAACATTATTAGTTCATGTAATAGTTTTGTTTGTTGATCAAGAACTTGCTTAATGACATTTCTAAATTCCGCCATTGCTTTTATTCAAACAAAGCGATTAAACACACAAAGATACACGATTAACACACACACACACAATGTCGTTGAAAAGACAAGTACGTTTTGAATGAGTTTTTCTTTGTTTCAAATGTTCAAAGTTTGTTTGCTAAGACCCGTTAGATAAATAGTCTTCACTTTACTGTTGTCACTTTATTGTTGTAAACTCCCAAATGGAAGAAATATGATGTTTTGCATATCTTTAAATATACACATGTGCTTGATATATTGAATAAGTTGTGGCTTGATTTATTGGACCAAGTCGTCTTAATGTTTTCATTAGTTTATAACAAGATCTTATTAACTCGTCTTAATCTAGTTTCTGTATTTTCGTTTTCATAATTCAAAGTTTAGTTTATAACAAGACCTTGCATTTTATTTGGTTGGTGTACGTTTTGAGCAGAAATGTGGGAAAGTTGATGAGCAAATTGATCTACTAAGACGTAAGCTGAGGCTGATTTATCATGGCGAAGCTTTCAACGGGAAACCAACAAAGACAGCTAGATCTCACGGCAAGAAGTTTCAAGTTTCTATCAAACAAGAAACGTCTAGAATACTGGTATCTATTTTACACCCTTGTTTAATTACAATTCTATTGAGTAATGAATTAGTTAATATTCTGTATTTCCTAAGTACTAATCAAATTACTAAGCACGTACAACTTATTGAATTGTCCCAACTAGATACGTTATTAGCCTGATACAAATATGACTACCAACTTGAGTACTCCGTATTAATTAATTAGTATAATGTACTACAACAACGACCATTCGAGTGTCTTATTTAGACCTTTATAGTTTGTTCTACCCTTCTACGTAACTAGAACAAACTTAAACATTCTTTAATAAGATTGTATACCCCGTCAGATATATCCTTTGACTTTTTACGTTTGTTGAGGCACAATTTTGTTAACAAACATAATAATGTCAATGCTTATGAACTTTCAAATTATATGGTCGCATTTTGCATTTCAGAATAAAATATTTCCTCCGTCCTTAAATAATACGGAGTACGCTGTAGGTCAGAATTAGTACTTTTAACACTACTAGCTAAAGATGGCTGTGGGCCGGGCCGTGCTTCGTGCCGATCCCACGGGCCGTGGGCCTAAACGTGCCGGGTCCACGTCAGGCCCACGTTGTTTCGTGCCGTGCCGGGCCGAAAAGTTAAAAATAAGGCCCAGGCCCGGCCCAAGCCCACGTGCTTTCGTGCCGGGCCGGGCCGGCCCGCGTGCCTAAGGCTAATTTGACTAAATTTAACGTGCTTTGTCGTGCCGGGTCGAGTCGTGACGTGCCTTGTCGTGCTTTTTCCAAAAAAGTAAGGCCCAGGCCTGGCCCACGACTTCGTGCCCGTGCCGGGCCGTGCTTTTTTCGTGCTCGTGCCGTGCTTTTTCCGTGCCGGGTCGGGTCGGGCTTCGGGCCGGCCCGGTCCACAGCCATCTTTACTACTAGCTACTCGGACAAGGCATAGCAAACTTTTTTGTGTATTTTGTAGCAATGTGTTTACCACTTTCCCCACACTCGTTTTGGACCACAGGGAAATTTGGGCTGGGCCTACATGCAGAAGACAAACTACATGGCTGCAGAAGTGGTGTATAGAAAGGCCCAAATGATTGACCCTGATGCAAATAAGGCCTGTAACTTGGGCTTTTGTCTTATTAAACAAGCCCGATATGAAGAAGCGCGTTCGGTGCTTGAGGAGGTAGTGGAGGCCAAGCTACCGGGCTCGGAGGATATCCGGTCTAGGAATCGGGCCGAGGAATTGTTGTTGGACTTGGAGTCACGGCAACCGCCTTCTTTGTTGTCTAACATTGTGTGCCTTGATTTGGAGGATGAGTTTGTTCATGGGCTTGAGGATCTTGAGTCTAAATGGGGCCCGTTAAGACCTAAAAGACTTCCCATTTTTGAGGAAATTTCCAACTTCAAAAATCAATTAGCTTGCTAAATATATACTCCTTTTTGTTGTATTTTAAACATGTTAATATAGAAATGTAGAGAGTGGTGATAGTAGGGTTAAATAGAAATGTATGTTGAAATAATTAAGGTTGCTTGTATACTAATGTCAATCATGTCTGAGGAGCTACAAATGAACTTTTGTACTACTTTCAATATATTTTCCTCAACATTACTATATTTGGTGAAGTTGTACCAACTAGATTTGGAAAACATGGATCGATTTTGTTAGGGCAGATCTGTGACGTCGTCAAAGTAAATTAAATTGATAGGATAATGTTATCTTGAAAGATGAAATTATTAAATATGGTCATTTAAAACTCAACATCCATCTAAACTTAGGGATTTAGCTTTTTATATGGTTGGGGGTAATGAGGTTAGGTTCGATTTTCAAAGTCAAAACACCATGCTTAGCATGTTAAATCAAGTGAAATAACCAAGATCGTTTGTTTATCCATATGCTTGAATGATGCAAGCACGTGGATAACACAATAGTCTTCTTAATACTATGCACAAGTTACAACCTATTGTATATAAAAAGTATTGGTTTAAGTTGACAACTCAAGTTCAAAGTTTAACCACTAAAATTTTGTGGAGTTTATAAACATCTAAAATTCAGTTGTATAATTGAATGTCAAAATAAGGCGGTTTAGACCATACATTTAACCATTTACAGTACAATTGCTCAATTTTACTAGAAGTTTCTCACTTAATATACCTCCCTTGCTTATAAAAAGAAGTCCAAAACAACCTTCTAACGATATGTGACAAAGATAAAATACGGTCATACGGAGTATCAACTAGCTTATATTGCCATTTTTTTTTTATAACAAGCTTATATTGTCATATTGTGCTAACAAACTAAGCCAATATATCGACTATGCCG ATGGAAAAAAGGATTAACAGAAGTCCAGGAGAGAAAGAATCACTTCATGCTGTTTACAAAGTTCCTTCTGGTGATGGCCCTTATGTTCGTGCCAAACATGCCCAGCTGGTGCAAAAGGATCCAGAAGCAGCAATAGTACTATTTTGGAAGGCTATAAATGCAGGGGATAGAGTGGATAGTGCACTGAAAGATATGGCAGTTGTTATGAAGCAACTTGATAGAACTGAAGAGGCTATTGAAGCTATTATGTCTTTTAGAGGCCTTTGTTCTAGGAATGCTCAAGAATCACTCGACAACGTCCTCATCGATTTGTATAAGAAATGTGGGAAAGTTGATGAGCAAATTGATCTACTAAGACGTAAGCTGAGGCTGATTTATCATGGCGAAGCTTTCAACGGGAAACCAACAAAGACAGCTAGATCTCACGGCAAGAAGTTTCAAGTTTCTATCAAACAAGAAACGTCTAGAATACTGGGAAATTTGGGCTGGGCCTACATGCAGAAGACAAACTACATGGCTGCAGAAGTGGTGTATAGAAAGGCCCAAATGATTGACCCTGATGCAAATAAGGCCTGTAACTTGGGCTTTTGTCTTATTAAACAAGCCCGATATGAAGAAGCGCGTTCGGTGCTTGAGGAGGTAGTGGAGGCCAAGCTACCGGGCTCGGAGGATATCCGGTCTAGGAATCGGGCCGAGGAATTGTTGTTGGACTTGGAGTCACGGCAACCGCCTTCTTTGTTGTCTAACATTGTGTGCCTTGATTTGGAGGATGAGTTTGTTCATGGGCTTGAGGATCTTGAGTCTAAATGGGGCCCGTTAAGACCTAAAAGACTTCCCATTTTTGAGGAAATTTCCAACTTCAAAAATCAATTAGCTTGCTAAATATATACTCCTTTTTGTTGTATTTTAAACATGTTAATATAGAAATGTAGAGAGTGGTGATAGTAGGGTTAAATAGAAATGTATGTTGAAATAATTAAGGTTGCTTGTATACTAATGTCAATCATGTCTGAGGAGCTACAAATGAACTTTTGTACTACTTTCAATATATTTTCCTCAACATTACTATATTTGGTGAAGTTGTACCAACTAGATTTGGAAAACATGGATCGATTTTGTTAGGGCAGATCTGTGACGTCGTCAAAGTAAATTAAATTGATAGGATAATGTTATCTTGAAAGATGAAATTATTAAATATGGTCATTTAAAACTCAACATCCATCTAAACTTAGGGATTTAGCTTTTTATATGGTTGGGGGTAATGAGGTTAGGTTCGATTTTCAAAGTCAAAACACCATGCTTAGCATGTTAAATCAAGTGAAATAACCAAGATCGTTTGTTTATCCATATGCTTGAATGATGCAAGCACGTGGATAACACAATAGTCTTCTTAATACTATGCACAAGTTACAACCTATTGTATATAAAAAGTATTGGTTTAAGTTGACAACTCAAGTTCAAAGTTTAACCACTAAAATTTTGTGGAGTTTATAAACATCTAAAATTCAGTTGTATAATTGAATGTCAAAATAAGGCGGTTTAGACCATACATTTAACCATTTACAGTACAATTGCTCAATTTTACTAGAAGTTTCTCACTTAATATACCTCCCTTGCTTATAAAAAGAAGTCCAAAACAACCTTCTAACGATATGTGACAAAGATAAAATACGGTCATACGGAGTATCAACTAGCTTATATTGCCATTTTTTTTTTATAACAAGCTTATATTGTCATATTGTGCTAACAAACTAAGCCAATATATCGACTATGCCG ATGGAAAAAAGGATTAACAGAAGTCCAGGAGAGAAAGAATCACTTCATGCTGTTTACAAAGTTCCTTCTGGTGATGGCCCTTATGTTCGTGCCAAACATGCCCAGCTGGTGCAAAAGGATCCAGAAGCAGCAATAGTACTATTTTGGAAGGCTATAAATGCAGGGGATAGAGTGGATAGTGCACTGAAAGATATGGCAGTTGTTATGAAGCAACTTGATAGAACTGAAGAGGCTATTGAAGCTATTATGTCTTTTAGAGGCCTTTGTTCTAGGAATGCTCAAGAATCACTCGACAACGTCCTCATCGATTTGTATAAGAAATGTGGGAAAGTTGATGAGCAAATTGATCTACTAAGACGTAAGCTGAGGCTGATTTATCATGGCGAAGCTTTCAACGGGAAACCAACAAAGACAGCTAGATCTCACGGCAAGAAGTTTCAAGTTTCTATCAAACAAGAAACGTCTAGAATACTGGGAAATTTGGGCTGGGCCTACATGCAGAAGACAAACTACATGGCTGCAGAAGTGGTGTATAGAAAGGCCCAAATGATTGACCCTGATGCAAATAAGGCCTGTAACTTGGGCTTTTGTCTTATTAAACAAGCCCGATATGAAGAAGCGCGTTCGGTGCTTGAGGAGGTAGTGGAGGCCAAGCTACCGGGCTCGGAGGATATCCGGTCTAGGAATCGGGCCGAGGAATTGTTGTTGGACTTGGAGTCACGGCAACCGCCTTCTTTGTTGTCTAACATTGTGTGCCTTGATTTGGAGGATGAGTTTGTTCATGGGCTTGAGGATCTTGAGTCTAAATGGGGCCCGTTAAGACCTAAAAGACTTCCCATTTTTGAGGAAATTTCCAACTTCAAAAATCAATTAGCTTGCTAA MEKRINRSPGEKESLHAVYKVPSGDGPYVRAKHAQLVQKDPEAAIVLFWKAINAGDRVDSALKDMAVVMKQLDRTEEAIEAIMSFRGLCSRNAQESLDNVLIDLYKKCGKVDEQIDLLRRKLRLIYHGEAFNGKPTKTARSHGKKFQVSIKQETSRILGNLGWAYMQKTNYMAAEVVYRKAQMIDPDANKACNLGFCLIKQARYEEARSVLEEVVEAKLPGSEDIRSRNRAEELLLDLESRQPPSLLSNIVCLDLEDEFVHGLEDLESKWGPLRPKRLPIFEEISNFKNQLAC Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo04503.1 vs. NCBI nr
Match: gi|902225284|gb|KNA20016.1| (hypothetical protein SOVF_056270 [Spinacia oleracea]) HSP 1 Score: 545.4 bits (1404), Expect = 6.000e-152 Identity = 278/293 (94.88%), Postives = 278/293 (94.88%), Query Frame = 1
BLAST of Spo04503.1 vs. NCBI nr
Match: gi|731347342|ref|XP_010684938.1| (PREDICTED: protein SULFUR DEFICIENCY-INDUCED 1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 537.3 bits (1383), Expect = 1.600e-149 Identity = 265/292 (90.75%), Postives = 282/292 (96.58%), Query Frame = 1
BLAST of Spo04503.1 vs. NCBI nr
Match: gi|870853847|gb|KMT05699.1| (hypothetical protein BVRB_7g167070 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 535.8 bits (1379), Expect = 4.700e-149 Identity = 264/289 (91.35%), Postives = 280/289 (96.89%), Query Frame = 1
BLAST of Spo04503.1 vs. NCBI nr
Match: gi|567902286|ref|XP_006443631.1| (hypothetical protein CICLE_v10021176mg [Citrus clementina]) HSP 1 Score: 459.5 bits (1181), Expect = 4.300e-126 Identity = 224/284 (78.87%), Postives = 260/284 (91.55%), Query Frame = 1
BLAST of Spo04503.1 vs. NCBI nr
Match: gi|568853110|ref|XP_006480210.1| (PREDICTED: protein SULFUR DEFICIENCY-INDUCED 1 isoform X2 [Citrus sinensis]) HSP 1 Score: 459.5 bits (1181), Expect = 4.300e-126 Identity = 224/284 (78.87%), Postives = 260/284 (91.55%), Query Frame = 1
BLAST of Spo04503.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKH5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_056270 PE=4 SV=1) HSP 1 Score: 545.4 bits (1404), Expect = 4.100e-152 Identity = 278/293 (94.88%), Postives = 278/293 (94.88%), Query Frame = 1
BLAST of Spo04503.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C068_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g167070 PE=4 SV=1) HSP 1 Score: 535.8 bits (1379), Expect = 3.300e-149 Identity = 264/289 (91.35%), Postives = 280/289 (96.89%), Query Frame = 1
BLAST of Spo04503.1 vs. UniProtKB/TrEMBL
Match: A0A067FEW5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022442mg PE=4 SV=1) HSP 1 Score: 459.5 bits (1181), Expect = 3.000e-126 Identity = 224/284 (78.87%), Postives = 260/284 (91.55%), Query Frame = 1
BLAST of Spo04503.1 vs. UniProtKB/TrEMBL
Match: V4U3Y2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021176mg PE=4 SV=1) HSP 1 Score: 459.5 bits (1181), Expect = 3.000e-126 Identity = 224/284 (78.87%), Postives = 260/284 (91.55%), Query Frame = 1
BLAST of Spo04503.1 vs. UniProtKB/TrEMBL
Match: B9S545_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1721260 PE=4 SV=1) HSP 1 Score: 455.7 bits (1171), Expect = 4.300e-125 Identity = 220/285 (77.19%), Postives = 256/285 (89.82%), Query Frame = 1
BLAST of Spo04503.1 vs. ExPASy Swiss-Prot
Match: SDI1_ARATH (Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis thaliana GN=SDI1 PE=2 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 4.900e-106 Identity = 188/286 (65.73%), Postives = 237/286 (82.87%), Query Frame = 1
BLAST of Spo04503.1 vs. ExPASy Swiss-Prot
Match: SDI2_ARATH (Protein SULFUR DEFICIENCY-INDUCED 2 OS=Arabidopsis thaliana GN=At1g04770 PE=2 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 9.700e-94 Identity = 184/303 (60.73%), Postives = 228/303 (75.25%), Query Frame = 1
BLAST of Spo04503.1 vs. ExPASy Swiss-Prot
Match: MS5L2_ARATH (Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana GN=At3g51280 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 8.200e-77 Identity = 149/242 (61.57%), Postives = 180/242 (74.38%), Query Frame = 1
BLAST of Spo04503.1 vs. ExPASy Swiss-Prot
Match: MS5_ARATH (Protein POLLENLESS 3 OS=Arabidopsis thaliana GN=MS5 PE=2 SV=2) HSP 1 Score: 246.5 bits (628), Expect = 3.600e-64 Identity = 126/245 (51.43%), Postives = 173/245 (70.61%), Query Frame = 1
BLAST of Spo04503.1 vs. ExPASy Swiss-Prot
Match: MS5L1_ARATH (Protein POLLENLESS 3-LIKE 1 OS=Arabidopsis thaliana GN=At5g44330 PE=2 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.800e-55 Identity = 115/244 (47.13%), Postives = 156/244 (63.93%), Query Frame = 1
BLAST of Spo04503.1 vs. TAIR (Arabidopsis)
Match: AT5G48850.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 385.6 bits (989), Expect = 2.800e-107 Identity = 188/286 (65.73%), Postives = 237/286 (82.87%), Query Frame = 1
BLAST of Spo04503.1 vs. TAIR (Arabidopsis)
Match: AT1G04770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 344.7 bits (883), Expect = 5.400e-95 Identity = 184/303 (60.73%), Postives = 228/303 (75.25%), Query Frame = 1
BLAST of Spo04503.1 vs. TAIR (Arabidopsis)
Match: AT3G51280.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 288.5 bits (737), Expect = 4.600e-78 Identity = 149/242 (61.57%), Postives = 180/242 (74.38%), Query Frame = 1
BLAST of Spo04503.1 vs. TAIR (Arabidopsis)
Match: AT4G20900.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 236.1 bits (601), Expect = 2.700e-62 Identity = 126/261 (48.28%), Postives = 173/261 (66.28%), Query Frame = 1
BLAST of Spo04503.1 vs. TAIR (Arabidopsis)
Match: AT5G44330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 217.6 bits (553), Expect = 1.000e-56 Identity = 115/244 (47.13%), Postives = 156/244 (63.93%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo04503.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo04503.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo04503.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo04503.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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