Spo04527 (gene) | SpinachBase

Overview


Name	Spo04527
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RNA-binding family protein
Location	chr2 : 3265528 .. 3279419 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGTGCCGGTATTCATCCTTATCACCACCAACAATGGCCACCTGTTCCGGCTCCTCCACCACCTCCTTCCACCGCCGCTCCTCCTCCTCTTCCTCCCCCAAACTCTGTCGTTCCTATGCCACCGCCGCCTCATCCTCCTCTCGATAATCGCCTCTGTGATGATGTCATTTTCTGTCTCGTACTTTTTATTTTTTTTAAAGAACACATTTTTTTGGTTGATTTTTGACTTGACAATGTACGAATAATCTTTTTGATGGATTTTGAGCAGGTGAGGACGATATTCATTTCGGGATTACCGGAAGATGTGAAGGAGAGAGAATTGCAGAATTTGCTACGGTGGTTGCCAGGTTACGAGGCGTCTCAGATTAATCAGAAAGGCGAGCATCCTATGGGATTTGCTCTTTTCTCTTCGCCTGAGTTTGCTCACGCTGCTAAGGATGCGCTTCAGGTGTTTTTTTCTTCCAATCTTTTATCATTTGATTTGTGTTTTGATGTATCGAAATCGTTGATTGTTTGTTGTTGTTTGATTTATTTTTGGTTCCGTGTTTGTAGAATATGGTTTTTGATGTGGATTCAAAGTCGGTTTTGCATACAGAAATGGCGAAAAAAAATCTTTTCGTTAAGAGAGGTTTGTGTTCGATTCTACATTTTGGTTTGTTGTTATGGTGGTTTATGTTGGCTAAATTAATCTTGATTGATAGATTATGAGTTGTTTGTACCAAGGAGGTGAGGGGGGATAGGAGGAAGTTTATGTATAGGATTATGGCTTGTTGTCGTTTTTTGGTCGAATGGAGAATGTGTAAAGGTTAATTTTGCGGCTGTTCGTGTTGTAACAAGTTTATGTTAGGTTTAGATATATGCAATTCTAAAGAAAAATCCTTTGGAAAGGTTTAGTGGTTAGTAGAAGGATTACTTTGTCATTGGAAAGTCTGACTTTGGTCTTTAGTTGAGTTCAAATGATGAACAGCTTTGTTCATTTACATCCTCCACAAGGAAAAAAACTTAAATGGAAATACTTGGAATAGGTTTGTTATTGCGTAAGGAAACTATATATAAGAGCATGACCAATGGCTAGCAACAAAGGTTGTTGCTTTGTTTTGCCACATCATTTCCAAACTGCTACCCAATTTCAAGCTACGACTTCTCTTATGGAATACCACTCGTACTTGTAGTTGTTGTAGATCCCACATGTCAATCATCATTTCAAATTAGTACAATATAATTTCATAATGATGTATGGTGGGGACCAAATATGGTGACAATAACAACAACAAAATGGCAAGTGAAACTGTGAAACACACTTTCCCATCTACACCATGTGTGTAGTACAATTGAGAGGAGAATGAGTTATTGTTTTTCTCAAAAACAAACACCAAGCTACTGGCTCCATAAAACTACAAGGTTTTGTAGAGCTACAAGTTTCATTCTTCCGCAATGGTTGAGCTTGTAGCTCTAACAATTTAATATCTGCTAGCAGGTCCTTCTTTTCAACAACTGATGATGCTCCAATGTCCTATTGACGTTGTCTATTTACTAGATAGTGGAATTTTATTGATGAATTGTTGCATTATATTCTTTTTCCCCCTTTTTTGACCCTTTAACAATACCAAGACAACAAGGCCCTGATATGGATCTGAAGAGTAGTAGGAGTATCCTCTTTAAATATTATAACCATCAAAACTAATCAAGGATTTTAGATTTTTGTCCAAAATATCATGCATCACACCATCTGTTTGGAAGGATGGAGAGGAAAAGGAGTGTTCTTTGATCCACCCAAATTGGTGAATACATTTAGATACGGGTGACATGATCAATACAACATGGGGAATCGGGGATTGTAGGAACATTCTGGATACTGAAATGTGTTATGGTGACATGATCTATATGATACGAGGATGCAGTGTTAGAACATTCTGGATACTGAAATGTGATACCACTTGTAAGGACATCTTATTTGATAATCTATCATATTAAGATAGTAAATGGGCCAAGGCCAACTGTTCCTACATCCGTGATTAGTCTTTTTTTTAAAAAAAATCTGTTCATTTTTTTGACAGATTGTGCTCCTGTTGGGATTTGCATGTATGTTTTTATGGATTATGGGTTAAGGAGTACAAGTTAGGATGCAGTACGTTTCTTAAAACTTCCATTTGGAACAAATGTCTGGCGTATATGTAAATAGAAAGTTTATAGAACATATCTGGTAGAAAATAAATGCATCATTTTCTTTTGTTTCTATGTTTTAGCCTTTTAGGAAAGCAGGAAGGTTTTATATCGATCAATTATTATAATATACATTGTTTAATCTTTGAAGAATTTACAGCCATCCTCTTTGTCTTTTACATAGAGGTAGGGTTTACCCAGTGTTTAAAAAAGCGCGCTTAAAGCTCGCTTAAGCGCTGAAGCTCGAAGCTCTAGGGCAAAGGGCTTAATTAGGTATGAGCGAAGCGTTTGTGAAAAAGCGCACCGAAGCGCACTTCAGCGCATGAAGCGCAAAAAGCGTATGAGCTTCATTGAAATTCTTCTTCTTTTTAATTCACATTAAAAGCTTTTTTTTATATGTTTGTTATTGTCTATTGGACCACATCCTATAATCCTTAACAATAGAAAGTGGGCCAAGAGTCGAAAGAAAAGAAAAAAAGAAGATGACATATCATTTTGAAAATAACATAGTATATTTGTTTCCTAGAAGGTCTTTCATTCCCTTTCTCTCTACTGTCTTGTACTGTTGTGTTTGATAAGTGATACGAAGTATAAACTACTCTTGCTTGCTTGCCAAAAAAAATAAAAAAATAAATAAGAGCATAAAGCTGGTAGAAAAAGACAGAGCTAGTGAAACGAGGTGTTAGGGTAGGTAGTTTGTAAAAGGAAAAGATAGTGGTAAACCCAGTGTTTAAAAAAGCGCAAAGCGCACTAAAGCGATATGAGTCCTAGAGCTTAAGCGTAAAGCGCAAGCGCAAAGCGCGAGCTTCATCTAAGTGAAGCGCACTTTTTAAGAATTCAAGGTTTCTTTACCATTATAGATATATATCTTACTAAAATAACCACAAAAATACATAAGCATCAGATTTTCTTCCCTATTGCTCCTTGTTTTAACAAAATAAAGAATACAACATAGTGTTTATCAAGGCTAAACTTACCCTACAAACTGCCCCTAGTAAGCCCAACAAACTGAGCTTACATAAAGAGAAACATTACAACTCCTGAAACCAGTTTCTACCATAATATCCTTGATCCTGTGCTTCACCTCAAACTGAATAAGCTGGACTGTAGTTGCAGGGGTAGGAACCACATTTCTCCAAACTGCAGAATTTCTGGGTAACCAGATGTGATACACTAGGCAGGCCATTGTTGCATAAGCCACGATCCTTCTGAAATTACTCTTGCTATACTTCCTGATCCAGTTCAGGCCATGAAGTTTAGTCCACCTACTATGAAAACCAAGCCAGGAGAAGACAACAGACTTGCAAGTAACACTGAAGTGACAGTCAAAGAAGAGATGTGGGATATCCTCTGCTACATTTCCACATATAGCACAAGAGTTGGAATCACACACTCCAATCTGGTGTAACCTTGCTCTAGTCTTAAGTCTGTCCAGTAGAGCAAGCCAAAGAATCACCCCTATGTTTTGGGACAGTTAGTCTGTTCCAAACATATTTGCACCACTGAGCTTTTGGGAGACTAACACTTAGCTAAGAGTACATATCTCTGATAGAGTACTTGTAAGCTGTTAGCCATTGGTGAGACTGCAATCTGGTATTGCAATGGTTAGATGCATTTAAATGCAGTCTCCTCTTATTGTCTGGGATTTTAGATGCATTTTTGAATGCCTGATTTGTATAGAAGGTATTTGGGAAATTTGATTATTGGACAGGAATACAGGATAGCAATTATTTTTGCAATTTAGCATTTAAATTATAGGTCCACTAAAAAAGTGGGATTGCTACCATCGGTACCTTATGCCATTTAAGCTGTCAATGTTAAATGTTTGTGTTTTTCCTTTTGTTAGATACTTCGTATACATTGCAAAAGCTGATTTGGCATCCAAAGTTCTGATACTCTTTGCTTCATTAAAGTTTGTGGTTTGATTTAGTGGAGATACTATGAAGTCACTTAAAAGTTTGTTGACATAATTATTATACTCAAAATATTAACTTTTACATCCTTACTGCTATACCTAAAAGAATGACACCATGCCTTTATTTTACTACGTACTTCGTAATTGTTTGTTATGCTTAAATCAATTTTCTACAAGAAAATCAACAAAGAAGCGAGTGCAAATTTGACCTCTGTTTTTTTCACCTATAAAAATTAGGTCAAAGACTCATAAGTTTTGACTAGTTCAATTCAAATGCTACTAAGTTCCAATTAGTTCAATTAAAGACTACTAAATGTAAGTACTATCAAAAAGAAATTTCAGTTAGGAAGAAATAAGTTCAACCATTTAGGGCAAATGGGTTTAGATGAGTTATAAGTTCAGTTCAGGGATATAAACTAAGGATATTTAGGTGAAATGAACGAGATGTTAGTATAAAGAAATTCAGTTATTGGGAATATATGATAGAAATATGATTTTAAGATGATAAGAGATTAAACATTCTCATATACATGGTGAAACTTTTTGAATTGAATAATATGTTTCTATGCTCAAACTTGATTAGGTTGAAAGATGTTAATTTCCTCTACGCTATCTTTGAACAATTGAACCTTTTTGACTTTTTCCGTCTAACTTCTATGGGAAACTTCCCATGTAAAAGAGGGATGCTTAGCTAGAAAGAGCGATGATAGAATTTTACAGAATTAAAAATTGTTAAGAACACTTTTAATTTTTCTTGTAATCACTGTAGATAATTGCTCGTCTTATTCATACTCTTTTCAACTTTCTTTGTGTCTTTATCACCTTTTTCTTCCTATCCGCGGGGGAGGACTGCTGTTGTGTTTGTATTGTTTAATAATCTTCTTGTTCACTCGTCTGCTTGTAATAGGTATTGTAGCAGATGCAAATGCTTATGACCAAAGTAAACGTTTAAGAACAGGTGGTGACTATACGCATACTGGTTATGCCAGTCCATCACCATTTCACCCTCCAGCACCTGTTTGGGGACCACATGGGTAGGTTTAAACTTTGATTTTTAGTGAAAGCAATGGCTTGTGAAAGTGTGAAACAATTATCAGTTATTAGTTATTAACTGACTCCATTTCTATGTCTTAGGTATATGGCTCCCCCTCCCCCTCCACCATATGATCCATATGGAGGATACCCTGTACCTCCAGTTCCCATGCCTGCTCCTGTACCTGCACCAAGTAGCTATGTTCCTGTGCAGGTACTTTCTCTTTCACTTACACCTCGTGCATGATACTAAACAATAATGGAAATCGTGGCAAGTATTTTCAATTTGACTTGTGTATTATGCTTATTTTGGTATAAAAACCTACTTCGATATGGCTATAGTCACTAAGCTTACCTATAAATATTGAATTTCATCTATAGTACATTCTTAGCAGCCTTGATGAATGTTTACAATTTTAAATCTTTTAACCTAATATTAAAGCGTCAAAAGTGCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCAAGTTTAATGTATAAAAAGTCTCGGTTAATTTATTATTAGCCTTACAAATGTTTAGACCTTTGTTTCATGATAAAATACGAGAAGTTTAAAAATTGCCCACCTCCCTCTCTCCAAAAATGTATAATTTGTGGACTATCAAAAATATGTTCAGCCACATGACTGCAACATTGAAGTCTACATATCTCATGTAATACTGTAGAGAATCTAGAACTTTTGTGTACGGCCGACGTTTGCTTGAATACAGAAAATGAAAACGACTGCAATTTTATTATTGTGGTGCCTATTTCATTCTTTGACTTACCTAGGTGAATGGAGACCCATGGCTAATGCTATTGCAGATTCTTAAACACAATCATATGACTGCAACATTGAAGGTTAAATATCTGATGTAGTACTGTAGAGAGTCTGGAACTTTTGTGAGCGGATGACCTCTGCTTGAATACAAAAAACTGAAAACGACTAAATTTAATTATCGTGGTGCCTATTTCATTCTTTCTTTTATCTAGGTGAATGGAGACTGATGGCTAAAATTAAGATATATTTTTGAGTGATATGAGATTGTGAGGTGCTTTTCTCTGTATATATATAGTTCAACTATTTCTGCCGAAGTCTTGTAAAAGGATTTTCTTTTGAAGTCGCCCACGGCGCTGTTTTTCCTATGTAGTCTTAACCCATACATACTAATATTTGTGCTTAAGCGTTTTTATTTATTTATTGTTTTGGAATGTCAATTAATTTCCTTAGGACTTTATGGATTTCTTTTGATGCGAAACGTCGACCTAAGTTGATGATCAGGTGACAGAAGCGCCGCAAGTCATGGTCAATGGTTACCTTTTGTGGTTACAACGCCGTTGATGGTTATTTAGGTGGTCGCTATTTTGGTGTGACCATAGTTCCCCTTAAATAGGTAGATTTTCACGCTTTGATTGCCAGCAAGGGTTGGTTTTGAGTTAACAAGATGATTGGAAGATTTAGGAAAGAGTTTGGGAGCTAAAATGAGCAAATAGGGCCTTGCACGACTGTGTCGTCGAGCTATTTTATTTTCAACAATCCAGAATGGTCATTCAAAATGGCACGCTCTTGCCAAAGCTGCACTTGATAGTCGCACGATTAAGCAACACACCAATAGGATTCTCAAGCTCCACTTTACCGTCGTATAGTTGTCGCACCATAGTGCAATATACACTCCTTTGTTATTTTGCAATGGGTATTTTTTTTCCTAACAATCAAGATCCAAGTATTGTTAAACTTTTGACTTTAGCTTGATTGTATTCTAATGGCCCTTATTTGGGGGTCACTTTAAGCTATATTAGCATTCCGATAATTATAATGTATGAGGGAACATGCCTGTATTCTTTTTGTTGAATTAAATATATGACAATTTCTTTCTCTTTAGTACTTTGTAAACTTTCCTGCGCAAAAAACGTGAAAACTCTTGAACTTTCCTTTGTGGTATTTGGTAAACCCTTGCTTATTTGATCTCTACTTCTGTGTTTAATTTGTAGCTTAGTTCTAGAATAGTGGTCATCTTTGTGCTAATCTCTTTTCAAGACCATATTTTTTTTCTTCTTCATGCAATCCAATGGAAACCCCAAAAATTTTGTTCCAAACATCTGAAATTTCTTGTTCGTGGATTATCAAAAGTAGTATCAAGAACTAAATGTCGCCTGAATATAAGGTTTACACCAAATATGCCACCGTAAGCTAAATTTTATACCCTTATGTCATTGTTGATAACTTTTATATCAAAGTCGCAAAAACCGAAAAGGTGCTATGTTCTGTACCAATTTGGCTAATTAGCCTTCTTGTTTATAGTGGCCAATCTGGTAACATAAAAATATTATTAACGGTGGTTGCAGCATGTTTCTAAATCATACCTTACATAACGACAAGTCCAAAGTCCGTTAAAGAACTGCTTTGTTTTATTTGGTACACAATTGAGTTGTCTAGCTGTCTTTGTCCTGAATTTCCTTTCAAGATCATACCATAAGTCCTTGTTGTTCATGCAAGCCCTTGAAAAACCCTAAAATATTTGTTTCTAAAATCTGAGATTTCCTGCCGTAGCTCGTGCCGGACAAACTTTATCTGTTGCTTCTTGGAAATAGGAATCACCAAGTACTGTATTTTTTAAATAGTTTTCAAGTGAAGTTTCCAATTTTTTCTGTATATCTTGCTTTGCGTAGCTAGCACTATCTCTCTTGTTCTCATTACTATTTTTTGTTGATCTGCAGAACACAAAGGATAACCCTCCTTGTAATACCTTGTTTATTGGTAACCTTGGGGAGAACATTAACGAGGAAGAGCTAAGGGGTTTGTTTAGCATGTAAGCTTGTCTCTTCCTTGTTTAACTGCTATTTTAATTTCTTTTTCCATTAACTCTTTTGGTGGGGGGGGGGGGGGGTGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGAATCGTTGCTCTTAGTGTAGATTCCATCAATTACCTAGACAGCAATGTTAGTTACCCTCAGACTCTCAGAGCCAATCTCCGGATTGAACAAATGTCCCCTGCCAGAAAACAGATTCATACTACCCTCCTTGGCACATTGCTCAGAGGATTTACAAAAGAACCTATGTCTTTTGTTCATGAGTGAAATTATATTTAAGGTTTTACAGAAGATTTGTACAAAGGATCCGTGAGTGAAGCAATGTGGTAGTGTATGGGCATGCGCTCATGGTTAATTTAAACTGTTTTAAGTTCCTGGCAGAAATTCAGGCCTTAAAGATATGAATGACAGATTAGTCTGAACCTCTTGTACCAACGGAACCGAAGTACCTGTGAACAGATTTTTTTAACGTAGATAGCGAATGGAATTACCGAGGTCCTTTGGTTTGCCAGTCCTGTGTGTTCTGCCTAACTGGTTAACTATGAATTGCACTGAGGATCTAGTGCATTTACTGTTATCTGATACATGTGCTTTTATCGTATATGTTAGGCTGTTGTAATGTTTACCCTTGCTTTTTGATCCAAGTGTCCTTCTGAATCAGCTCTTTTTTTCATGTACTTCCTCTGTTTTTTAATACTTGCAACTTTTGACTTAGTCTCAAATATCTTTTCGAAATATCATTTTATGATTTTTAAATAACAGTTAGAGATATTGATAGTCAAAGTTAGGCATTGGCAAACATGAACTTCAAAGTTTTGCAAGTATTAAGTAACCTAGGAAGTACAAATTATGTCTACAGCACATGAAGGGCATACCTTCCGGCAAGCTACCCCCCCTTCCCCCCATGTACTCATAACTTGATTCCTCGTTATTGGGTGATATCTTGGGTCGGAGGGTTTGAGAATCGCTATATGTTTAGGGCACAGCACACATGTAATTATATTTGTCTTTAAATGTGGAATGTTTTTAATTTATTTCATGTGCATGTGTTCAATTTAAGGTGTAGAAGGTTGTTCAATATTGACGCCTGGGATTTTCCGAATATTGACTTTTTTCTTTAAATACCCTGTTTTATTCATGGGTTCATGTGTGCAGACAATCAGGATTTAAGCAGATGAAGGTTCTGAGGCAGGAAAGACACACTGTTTGCTTTATTGAGTTTGAAGTAAGTGTTCACTACAGAGGTTGATTGGTTTCTTGTGTCATCATTTTCCTTCTGTTTCACTTCTTGCAATAAATACTGTATTCTTCTTTGCAGGATTTGAATAGTGCTTCTCATGTCCATCATAATCTACAAGGGGCTGTTATTCCCAGTTCTGGCTCTATTGGCATGCGTATACAATATCCTTTCTTTTGTTTATCATGCATATTCAGCTCTTGATTATGTGAAATATTTAGGTTACAGTTTCTGTAATTTTAGGAATTTCATGTTTGGTTTACCTCATGTCTGTTCCTCGTGGAATCCTTAGTTTCTTGCATTTTGGGCATTTAAGTATTTGGGTAGGCTTGGATTGTTCGTGGTCTGGGTTGGTGAGGTTTAGTACCCAAACCAAACTAGACCGCACCAAAGTGTTACGGTTTGGTGCTGTATGGTTTGTGGTTTAACCACATTTTTAAAAAAAATCACGTAAAAATAACACTTTTTTTTTGGTGACTATTATAAAACTCATAATGGATGTTTGAGACTATCTTACTTGGAAACATTAGTTTATTTTTCATTTTATTTTATTTATATACATATCTTTTAGATTAAAATTGGATGACTTAGACTTGTTACTGGCACATATTGTAAATTTATAAACTTTGAATACGTGGTTACAGTAGGTTTATTTTATTTTTGATTTGTTTAACTAAAAAAATGATAAAAATGGTGCCTGGTTTAATGAGGTTTGTGGTGCGGTTTGTTTCACAATTTTTGAAACATCTAATCCGTTGCAAACTGGGGTCTGGTCAAAATCTCAACCATTCCGCAATTTTTTCAGATTGCAACAGAAACTGCAAAATAACGGTTTGGTCGTGGTTTACCGCACTCTGAACAGCCTTTGTAAGGCAGTTGATTGCTTGATGTAATTTTGTTTGAAGGCATGTCTCCACTGCAATGATCATGAATTACATTTGCTTTTTTCTTTTCGTATTTTATGGCTATCTGTGTATTATAATTTGTTTTGATTAAAGTTTCTTCACCATTTTGCCTTTTTCATTTAACTCATTCATTTTTCTTGACTTTGAAACGTATTCGAAGAATCCCTATGGTAAGCGGAAGGATTCCAATCATTCTGCTGCTGCTATCAATGCTGCTGCTGCACCTATGAATACCATGAGTGGAGCTGCCCCACCTATGACTTACCAGTAGTCCGAAGGGGATGTACTCTGTTTTTAATGGTCCAAAAATGCAACTACATGATAAGATGCATCATGCAGCAGTTACACACATCCATTTCATCAGCATTAGCATTTCTTCTCATGTGAATGAATACGCATATTGACATCATGAATGTACCATTGAGCCATATTGTTTCTTGACATCCGATATGCTTCTTCTCCGCATATTGGCATCATGAATGTACCATCGGGCCATGTTTTTCCTTGGCATGTGATATGCATTTGAAGAAGCATCCTAACTGCCTTGATGACATCATAGATATCACAGTTTTTGTTTGTTGTATTACTGATGCATTTCCTGTTGTAGTTTTATGGATGTGTGTGTTTAATGTTCATATTGACCATGCTATTGATTGAATAAAACATAGATGGACTGCCAAGTCATGTAGCTGGAACTTGTGCTCTTGTAGTCTTGTGTGACATTTCATGGGCATGAAGTTGTGATATAGGAAGCATAGGAGTTCACATCACTGATCATGATTGCTTTGCAATCCATTGCCATTATCATTGGCATCATGATTCATTTATCATCAACCCTATCGATCCATCATCTCTACTGGTTCAAACAGGAGATAAACATACATTTCAGTCAGGGTTTAGGCTCTTCTATCAAAAGAATTTATGCTTGAGAATGTTGTTCTCGTGCAGTCTATTTCAGTCAGTTACTAATGATATTATTGCTTTGTGTTCAAATGATCGCTGAAGCTCATTTTTCAGGTAATCATTCTGGAGTTTCCTGGGATAATATGTTAAAGTTCTTTTGATCAAGTGAATTACTTTGGTAGTCTCGTAGTTTATGCAGTTCAAGCACTCATGGTCTTATGAGCTTCTGTTTGGCTGTTTTTGCTGAGTTCTGTTGGGTTTTGGATTGATTATTGTAGTTTCAACTTTGTAAGAGAAATGTATTTAGTCGCGAGAGTGATAACTTGAGGACCGGCTGCTATTTTGTCTTCCGTACTGTTTGACAACTATAACTTGTATTTTCATTTTTGCTTTTGGAAGGTAAATTGGACTCTTAAGCTGTCGTATGTTACGATTTGACTTAGGTAGTGGTGGTGCATGCCTCGGCATTGTGCATGTGTGTGAAGTAAGACCTGTTCTACAGGCCGGGTTAGGGCTGGACTGGGCTGAAGCTAGAATCTAAACAAAGCAGCCGCAAAACTTTGAACCACCGCCCTTCCCGTTCCCCTCTCCAGATCTGATTGTTTTGGATAGATTTTAAGTGTTGGAGTTTGCTTGTTTCATCTTCAATCAAGTGGTTTCTTCCAAAACTCGACAAGGTTGAAGCGTTATTTGCTGAAGACAAGGTTGAAGATGATACACATGAGCAAGGTTTGGTTGAAATTAATTTAGAGGAATTACTTCAAAAATTGTTCATGAAAAAGAGGAGAGAGAAAGTGGTGAAAGCAATGAGTTCTGGTCTTCTTTGCCTTCCTTGAATTCTCTTTTTTTATTTGTGTATAATTTTTTATCATCTTGTTTAATTAATCCATTCAGCAAATAAACCTATAAGGGCCCAATCCACCCATTAAACATCAACCCTTTAAGATCCCAACCCATTTACTTCGTATAAAAATAATGGGTTGAACCCATTTTAAAATGGCCTGCACTCGGGCTTTTAATGGGCACCCAACCCGTTGAACATGTATGTGAAGGCACAAATGCGACTGCGTGTAGCCAACCCTCGATCTTTAGAAAGGCTCTGCGTAAAGCTTTCACTTCCATTCACATTCCTTGGGGAATTTCATTGACAATGTAATGATATGAAAATTTCTCTGGCAAGCTGGTACACGAGTAACTAATTGCACATGCTAAAGTATTTTTTGAACCTGAGCTGTTTGGCTATTGAC

mRNA sequence

ATGGCGGGTGCCGGTATTCATCCTTATCACCACCAACAATGGCCACCTGTTCCGGCTCCTCCACCACCTCCTTCCACCGCCGCTCCTCCTCCTCTTCCTCCCCCAAACTCTGTCGTTCCTATGCCACCGCCGCCTCATCCTCCTCTCGATAATCGCCTCTGTGATGATGTCATTTTCTGTCTCGTGAGGACGATATTCATTTCGGGATTACCGGAAGATGTGAAGGAGAGAGAATTGCAGAATTTGCTACGGTGGTTGCCAGGTTACGAGGCGTCTCAGATTAATCAGAAAGGCGAGCATCCTATGGGATTTGCTCTTTTCTCTTCGCCTGAGTTTGCTCACGCTGCTAAGGATGCGCTTCAGAATATGGTTTTTGATGTGGATTCAAAGTCGGTTTTGCATACAGAAATGGCGAAAAAAAATCTTTTCGTTAAGAGAGGTATTGTAGCAGATGCAAATGCTTATGACCAAAGTAAACGTTTAAGAACAGGTGGTGACTATACGCATACTGGTTATGCCAGTCCATCACCATTTCACCCTCCAGCACCTGTTTGGGGACCACATGGGTATATGGCTCCCCCTCCCCCTCCACCATATGATCCATATGGAGGATACCCTGTACCTCCAGTTCCCATGCCTGCTCCTGTACCTGCACCAAGTAGCTATGTTCCTGTGCAGAACACAAAGGATAACCCTCCTTGTAATACCTTGTTTATTGGTAACCTTGGGGAGAACATTAACGAGGAAGAGCTAAGGGGTTTGTTTAGCATACAATCAGGATTTAAGCAGATGAAGGTTCTGAGGCAGGAAAGACACACTGTTTGCTTTATTGAGTTTGAAGATTTGAATAGTGCTTCTCATGTCCATCATAATCTACAAGGGGCTGTTATTCCCAGTTCTGGCTCTATTGGCATGCGTATACAGTATTCGAAGAATCCCTATGGTAAGCGGAAGGATTCCAATCATTCTGCTGCTGCTATCAATGCTGCTGCTGCACCTATGAATACCATGAGTGGAGCTGCCCCACCTATGACTTACCAGTAGTCCGAAGGGGATGTACTCTGTTTTTAATGGTCCAAAAATGCAACTACATGATAAGATGCATCATGCAGCAGTTACACACATCCATTTCATCAGCATTAGCATTTCTTCTCATGTGAATGAATACGCATATTGACATCATGAATGTACCATTGAGCCATATTGTTTCTTGACATCCGATATGCTTCTTCTCCGCATATTGGCATCATGAATGTACCATCGGGCCATGTTTTTCCTTGGCATGTGATATGCATTTGAAGAAGCATCCTAACTGCCTTGATGACATCATAGATATCACAGTTTTTGTTTGTTGTATTACTGATGCATTTCCTGTTGTAGTTTTATGGATGTGTGTGTTTAATGTTCATATTGACCATGCTATTGATTGAATAAAACATAGATGGACTGCCAAGTCATGTAGCTGGAACTTGTGCTCTTGTAGTCTTGTGTGACATTTCATGGGCATGAAGTTGTGATATAGGAAGCATAGGAGTTCACATCACTGATCATGATTGCTTTGCAATCCATTGCCATTATCATTGGCATCATGATTCATTTATCATCAACCCTATCGATCCATCATCTCTACTGGTTCAAACAGGAGATAAACATACATTTCAGTCAGGGTTTAGGCTCTTCTATCAAAAGAATTTATGCTTGAGAATGTTGTTCTCGTGCAGTCTATTTCAGTCAGTTACTAATGATATTATTGCTTTGTGTTCAAATGATCGCTGAAGCTCATTTTTCAGGTAATCATTCTGGAGTTTCCTGGGATAATATGTTAAAGTTCTTTTGATCAAGTGAATTACTTTGGTAGTCTCGTAGTTTATGCAGTTCAAGCACTCATGGTCTTATGAGCTTCTGTTTGGCTGTTTTTGCTGAGTTCTGTTGGGTTTTGGATTGATTATTGTAGTTTCAACTTTGTAAGAGAAATGTATTTAGTCGCGAGAGTGATAACTTGAGGACCGGCTGCTATTTTGTCTTCCGTACTGTTTGACAACTATAACTTGTATTTTCATTTTTGCTTTTGGAAGGTAAATTGGACTCTTAAGCTGTCGTATGTTACGATTTGACTTAGGTAGTGGTGGTGCATGCCTCGGCATTGTGCATGTGTGTGAAGTAAGACCTGTTCTACAGGCCGGGTTAGGGCTGGACTGGGCTGAAGCTAGAATCTAAACAAAGCAGCCGCAAAACTTTGAACCACCGCCCTTCCCGTTCCCCTCTCCAGATCTGATTGTTTTGGATAGATTTTAAGTGTTGGAGTTTGCTTGTTTCATCTTCAATCAAGTGGTTTCTTCCAAAACTCGACAAGGTTGAAGCGTTATTTGCTGAAGACAAGGTTGAAGATGATACACATGAGCAAGGTTTGGTTGAAATTAATTTAGAGGAATTACTTCAAAAATTGTTCATGAAAAAGAGGAGAGAGAAAGTGGTGAAAGCAATGAGTTCTGGTCTTCTTTGCCTTCCTTGAATTCTCTTTTTTTATTTGTGTATAATTTTTTATCATCTTGTTTAATTAATCCATTCAGCAAATAAACCTATAAGGGCCCAATCCACCCATTAAACATCAACCCTTTAAGATCCCAACCCATTTACTTCGTATAAAAATAATGGGTTGAACCCATTTTAAAATGGCCTGCACTCGGGCTTTTAATGGGCACCCAACCCGTTGAACATGTATGTGAAGGCACAAATGCGACTGCGTGTAGCCAACCCTCGATCTTTAGAAAGGCTCTGCGTAAAGCTTTCACTTCCATTCACATTCCTTGGGGAATTTCATTGACAATGTAATGATATGAAAATTTCTCTGGCAAGCTGGTACACGAGTAACTAATTGCACATGCTAAAGTATTTTTTGAACCTGAGCTGTTTGGCTATTGAC

Coding sequence (CDS)

ATGGCGGGTGCCGGTATTCATCCTTATCACCACCAACAATGGCCACCTGTTCCGGCTCCTCCACCACCTCCTTCCACCGCCGCTCCTCCTCCTCTTCCTCCCCCAAACTCTGTCGTTCCTATGCCACCGCCGCCTCATCCTCCTCTCGATAATCGCCTCTGTGATGATGTCATTTTCTGTCTCGTGAGGACGATATTCATTTCGGGATTACCGGAAGATGTGAAGGAGAGAGAATTGCAGAATTTGCTACGGTGGTTGCCAGGTTACGAGGCGTCTCAGATTAATCAGAAAGGCGAGCATCCTATGGGATTTGCTCTTTTCTCTTCGCCTGAGTTTGCTCACGCTGCTAAGGATGCGCTTCAGAATATGGTTTTTGATGTGGATTCAAAGTCGGTTTTGCATACAGAAATGGCGAAAAAAAATCTTTTCGTTAAGAGAGGTATTGTAGCAGATGCAAATGCTTATGACCAAAGTAAACGTTTAAGAACAGGTGGTGACTATACGCATACTGGTTATGCCAGTCCATCACCATTTCACCCTCCAGCACCTGTTTGGGGACCACATGGGTATATGGCTCCCCCTCCCCCTCCACCATATGATCCATATGGAGGATACCCTGTACCTCCAGTTCCCATGCCTGCTCCTGTACCTGCACCAAGTAGCTATGTTCCTGTGCAGAACACAAAGGATAACCCTCCTTGTAATACCTTGTTTATTGGTAACCTTGGGGAGAACATTAACGAGGAAGAGCTAAGGGGTTTGTTTAGCATACAATCAGGATTTAAGCAGATGAAGGTTCTGAGGCAGGAAAGACACACTGTTTGCTTTATTGAGTTTGAAGATTTGAATAGTGCTTCTCATGTCCATCATAATCTACAAGGGGCTGTTATTCCCAGTTCTGGCTCTATTGGCATGCGTATACAGTATTCGAAGAATCCCTATGGTAAGCGGAAGGATTCCAATCATTCTGCTGCTGCTATCAATGCTGCTGCTGCACCTATGAATACCATGAGTGGAGCTGCCCCACCTATGACTTACCAGTAG

Protein sequence

MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDVIFCLVRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDALQNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPFHPPAPVWGPHGYMAPPPPPPYDPYGGYPVPPVPMPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGAVIPSSGSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04527.1	Spo04527.1	mRNA

Homology

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BLAST of Spo04527.1 vs. NCBI nr
Match: gi|902219223|gb|KNA18250.1| (hypothetical protein SOVF_072300 [Spinacia oleracea])

HSP 1 Score: 678.7 bits (1750), Expect = 5.300e-192
Identity = 342/347 (98.56%), Postives = 342/347 (98.56%), Query Frame = 1

		  
Query: 1   MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDVIFC 60
           MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDV   
Sbjct: 1   MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDV--- 60

Query: 61  LVRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDAL 120
             RTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDAL
Sbjct: 61  --RTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDAL 120

Query: 121 QNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPFHP 180
           QNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPFHP
Sbjct: 121 QNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPFHP 180

Query: 181 PAPVWGPHGYMAPPPPPPYDPYGGYPVPPVPMPAPVPAPSSYVPVQNTKDNPPCNTLFIG 240
           PAPVWGPHGYMAPPPPPPYDPYGGYPVPPVPMPAPVPAPSSYVPVQNTKDNPPCNTLFIG
Sbjct: 181 PAPVWGPHGYMAPPPPPPYDPYGGYPVPPVPMPAPVPAPSSYVPVQNTKDNPPCNTLFIG 240

Query: 241 NLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGAVIPSS 300
           NLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGAVIPSS
Sbjct: 241 NLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGAVIPSS 300

Query: 301 GSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ 348
           GSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ
Sbjct: 301 GSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ 342

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BLAST of Spo04527.1 vs. NCBI nr
Match: gi|731351920|ref|XP_010687275.1| (PREDICTED: RNA-binding protein with multiple splicing 2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 554.7 bits (1428), Expect = 1.200e-154
Identity = 296/352 (84.09%), Postives = 307/352 (87.22%), Query Frame = 1

		  
Query: 1   MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDVIFC 60
           MA   IHPYH QQW  VP PPPPP+  A PP PPPNS +PMPPPPHP LD +        
Sbjct: 1   MANTNIHPYHQQQW--VPPPPPPPT--ATPPAPPPNSAIPMPPPPHPSLDEQ-------- 60

Query: 61  LVRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDAL 120
            VRTIF+SGLPEDVKERELQNLLRWLPGYEASQIN KGEHPMGFALF++PEFAHAAKDAL
Sbjct: 61  -VRTIFLSGLPEDVKERELQNLLRWLPGYEASQINYKGEHPMGFALFTTPEFAHAAKDAL 120

Query: 121 QNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPFHP 180
           QNMVFD DSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTG DYTHTGYASPSPFHP
Sbjct: 121 QNMVFDADSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTG-DYTHTGYASPSPFHP 180

Query: 181 P-APVWGPHGYMAPPPPPPYDPYGGYPVPPVPMP----APVPAPSSYVPVQNTKDNPPCN 240
           P APVWGPHGYMAP PPP YD YGGYPVPPVPMP    APVPAPSSYVPVQNTKDNPPCN
Sbjct: 181 PPAPVWGPHGYMAPLPPPSYDAYGGYPVPPVPMPAPAPAPVPAPSSYVPVQNTKDNPPCN 240

Query: 241 TLFIGNLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGA 300
           TLFIGNLGE INE+ELRGLF+IQ GFKQMKVLRQERHTVCFIEFEDLNSAS VHHNLQGA
Sbjct: 241 TLFIGNLGETINEDELRGLFTIQPGFKQMKVLRQERHTVCFIEFEDLNSASLVHHNLQGA 300

Query: 301 VIPSSGSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ 348
           VIPSSGS+GMRIQYSKNP+GKRKDSNHS AA  A AAP   M+GAAPPM YQ
Sbjct: 301 VIPSSGSVGMRIQYSKNPFGKRKDSNHSPAA--AVAAPTIAMNGAAPPMNYQ 336

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BLAST of Spo04527.1 vs. NCBI nr
Match: gi|590614966|ref|XP_007023092.1| (RNA-binding family protein [Theobroma cacao])

HSP 1 Score: 502.3 bits (1292), Expect = 6.800e-139
Identity = 271/350 (77.43%), Postives = 294/350 (84.00%), Query Frame = 1

		  
Query: 1   MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDVIFC 60
           MAGAGIHPYH QQWPP PAPPPPP+ AA  P PPP+  V  PPPP    D          
Sbjct: 1   MAGAGIHPYH-QQWPPAPAPPPPPAAAAAAPPPPPS--VHHPPPPASSHDE--------- 60

Query: 61  LVRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDAL 120
            VRTIFI+GLPEDVKERELQNLLRWLPGYEASQ+N KGE PMGFALFSS + A AAKD+L
Sbjct: 61  -VRTIFITGLPEDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSSAQLAVAAKDSL 120

Query: 121 QNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPFHP 180
           Q+M+FD +SKSVLH EMAKKNLFVKRGIVAD+NAYDQSKRLRTGGDY+H+ Y +PSPFHP
Sbjct: 121 QDMLFDAESKSVLHIEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHSAYTAPSPFHP 180

Query: 181 P-APVWGPHGYMAPPPPPPYDPYGGYPVPPVPMP--APVPAPSSYVPVQNTKDNPPCNTL 240
           P APVWGP GYMAP PPP YDPYGGYPVPPVPMP  APVPAPSSYVPVQNTKDNPPCNTL
Sbjct: 181 PPAPVWGPQGYMAPTPPP-YDPYGGYPVPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTL 240

Query: 241 FIGNLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGAVI 300
           FIGNLGENINEEELRGLFS+Q GFKQMK+LRQERHTVCFIEFED+N+A++VHHNLQGAVI
Sbjct: 241 FIGNLGENINEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHNLQGAVI 300

Query: 301 PSSGSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ 348
           PSSGS+GMRIQYSKNP+GKRKDS H  A+  A        +GA P MTYQ
Sbjct: 301 PSSGSVGMRIQYSKNPFGKRKDSGHPIASPGA--------NGAPPSMTYQ 328

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BLAST of Spo04527.1 vs. NCBI nr
Match: gi|1009152470|ref|XP_015894111.1| (PREDICTED: U1 small nuclear ribonucleoprotein A [Ziziphus jujuba])

HSP 1 Score: 502.3 bits (1292), Expect = 6.800e-139
Identity = 271/352 (76.99%), Postives = 291/352 (82.67%), Query Frame = 1

		  
Query: 1   MAGAGIHPYHHQQWPP---VPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDV 60
           MAGAGIHPYH QQWPP   VP PPPPP  A     PPP+     PPP      NR   D 
Sbjct: 1   MAGAGIHPYH-QQWPPAAQVPPPPPPPVAAGAAAAPPPHH----PPPILVDNPNRPATDE 60

Query: 61  IFCLVRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAK 120
               VRTIFI+GLPEDVKERELQNLLRWLPGYEASQ+N KGE PMGFALFSS + A AAK
Sbjct: 61  ----VRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSSAQQALAAK 120

Query: 121 DALQNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSP 180
           D LQNMVFD +SKSVLHTEMAKKNLFVKRGIVAD+++YDQSKRLRTGGDY+H GY+SPSP
Sbjct: 121 DTLQNMVFDAESKSVLHTEMAKKNLFVKRGIVADSSSYDQSKRLRTGGDYSHAGYSSPSP 180

Query: 181 FHPPAPVWGPHGYMAPPPPPPYDPYGGYPVPPVPM--PAPVPAPSSYVPVQNTKDNPPCN 240
           FHPPAPVWGPHGYMA PPPPPYDPYGGYPVPPVPM  PAP+PAPSSYVPVQNTKDNPPCN
Sbjct: 181 FHPPAPVWGPHGYMA-PPPPPYDPYGGYPVPPVPMPAPAPLPAPSSYVPVQNTKDNPPCN 240

Query: 241 TLFIGNLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGA 300
           TLFIGNLGENINEEELRGLFS+Q GFKQMK+LRQERHTVCFIEFED+NSA++VHHNLQGA
Sbjct: 241 TLFIGNLGENINEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGA 300

Query: 301 VIPSSGSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ 348
           VIPSSGS+GMRIQYSKNP+GKRKD NH+  A      P        P +TYQ
Sbjct: 301 VIPSSGSVGMRIQYSKNPFGKRKDGNHAGIASAVGGTP-------PPALTYQ 335

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BLAST of Spo04527.1 vs. NCBI nr
Match: gi|568878037|ref|XP_006492013.1| (PREDICTED: RNA-binding protein with multiple splicing [Citrus sinensis])

HSP 1 Score: 500.4 bits (1287), Expect = 2.600e-138
Identity = 270/352 (76.70%), Postives = 291/352 (82.67%), Query Frame = 1

		  
Query: 1   MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDN--RLCDDVI 60
           MAGAGIH YH QQWPP PAPPPPP+ AA  P          PPPP  P DN  R+  D  
Sbjct: 1   MAGAGIHTYH-QQWPPAPAPPPPPAAAAAAP----------PPPPPAPYDNTNRIAHDE- 60

Query: 61  FCLVRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKD 120
              VRTIFI+GLP+DVKERELQNLLRWLPGYEASQ+N KGE PMGFALFS+ + A AAKD
Sbjct: 61  ---VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 120

Query: 121 ALQNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPF 180
           ALQ M+FD ++KSVLHTEMAKKNLFVKRGIVAD NAYDQSKRLRTGGDYTHTGY++PSPF
Sbjct: 121 ALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPF 180

Query: 181 H-PPAPVWGPHGYMAPPPPPPYDPYGGYPVPPV--PMPAPVPAPSSYVPVQNTKDNPPCN 240
           H PPAPVWGPHGYMA PPPPPYDPYGGY VPPV  P PAPVPAPSSYVPVQNTKDNPPCN
Sbjct: 181 HAPPAPVWGPHGYMA-PPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCN 240

Query: 241 TLFIGNLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGA 300
           TLFIGNLGE+INEEELRGLFS Q GFKQMKVLRQERHTVCFIEFED+NSAS VHHNLQGA
Sbjct: 241 TLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGA 300

Query: 301 VIPSSGSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ 348
           VIPSSGS+GMRIQYSKNP+GKRKD +H+ A+  A        +G  P + YQ
Sbjct: 301 VIPSSGSVGMRIQYSKNPFGKRKDGSHAIASPAA--------NGVPPALNYQ 328

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BLAST of Spo04527.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFJ2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_072300 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 3.700e-192
Identity = 342/347 (98.56%), Postives = 342/347 (98.56%), Query Frame = 1

		  
Query: 1   MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDVIFC 60
           MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDV   
Sbjct: 1   MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDV--- 60

Query: 61  LVRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDAL 120
             RTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDAL
Sbjct: 61  --RTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDAL 120

Query: 121 QNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPFHP 180
           QNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPFHP
Sbjct: 121 QNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPFHP 180

Query: 181 PAPVWGPHGYMAPPPPPPYDPYGGYPVPPVPMPAPVPAPSSYVPVQNTKDNPPCNTLFIG 240
           PAPVWGPHGYMAPPPPPPYDPYGGYPVPPVPMPAPVPAPSSYVPVQNTKDNPPCNTLFIG
Sbjct: 181 PAPVWGPHGYMAPPPPPPYDPYGGYPVPPVPMPAPVPAPSSYVPVQNTKDNPPCNTLFIG 240

Query: 241 NLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGAVIPSS 300
           NLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGAVIPSS
Sbjct: 241 NLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGAVIPSS 300

Query: 301 GSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ 348
           GSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ
Sbjct: 301 GSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ 342

[Close]

BLAST of Spo04527.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUT4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g188970 PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 8.100e-155
Identity = 296/352 (84.09%), Postives = 307/352 (87.22%), Query Frame = 1

		  
Query: 1   MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDVIFC 60
           MA   IHPYH QQW  VP PPPPP+  A PP PPPNS +PMPPPPHP LD +        
Sbjct: 1   MANTNIHPYHQQQW--VPPPPPPPT--ATPPAPPPNSAIPMPPPPHPSLDEQ-------- 60

Query: 61  LVRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDAL 120
            VRTIF+SGLPEDVKERELQNLLRWLPGYEASQIN KGEHPMGFALF++PEFAHAAKDAL
Sbjct: 61  -VRTIFLSGLPEDVKERELQNLLRWLPGYEASQINYKGEHPMGFALFTTPEFAHAAKDAL 120

Query: 121 QNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPFHP 180
           QNMVFD DSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTG DYTHTGYASPSPFHP
Sbjct: 121 QNMVFDADSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTG-DYTHTGYASPSPFHP 180

Query: 181 P-APVWGPHGYMAPPPPPPYDPYGGYPVPPVPMP----APVPAPSSYVPVQNTKDNPPCN 240
           P APVWGPHGYMAP PPP YD YGGYPVPPVPMP    APVPAPSSYVPVQNTKDNPPCN
Sbjct: 181 PPAPVWGPHGYMAPLPPPSYDAYGGYPVPPVPMPAPAPAPVPAPSSYVPVQNTKDNPPCN 240

Query: 241 TLFIGNLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGA 300
           TLFIGNLGE INE+ELRGLF+IQ GFKQMKVLRQERHTVCFIEFEDLNSAS VHHNLQGA
Sbjct: 241 TLFIGNLGETINEDELRGLFTIQPGFKQMKVLRQERHTVCFIEFEDLNSASLVHHNLQGA 300

Query: 301 VIPSSGSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ 348
           VIPSSGS+GMRIQYSKNP+GKRKDSNHS AA  A AAP   M+GAAPPM YQ
Sbjct: 301 VIPSSGSVGMRIQYSKNPFGKRKDSNHSPAA--AVAAPTIAMNGAAPPMNYQ 336

[Close]

BLAST of Spo04527.1 vs. UniProtKB/TrEMBL
Match: A0A061GFC4_THECC (RNA-binding family protein OS=Theobroma cacao GN=TCM_027095 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 4.800e-139
Identity = 271/350 (77.43%), Postives = 294/350 (84.00%), Query Frame = 1

		  
Query: 1   MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDVIFC 60
           MAGAGIHPYH QQWPP PAPPPPP+ AA  P PPP+  V  PPPP    D          
Sbjct: 1   MAGAGIHPYH-QQWPPAPAPPPPPAAAAAAPPPPPS--VHHPPPPASSHDE--------- 60

Query: 61  LVRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDAL 120
            VRTIFI+GLPEDVKERELQNLLRWLPGYEASQ+N KGE PMGFALFSS + A AAKD+L
Sbjct: 61  -VRTIFITGLPEDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSSAQLAVAAKDSL 120

Query: 121 QNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPFHP 180
           Q+M+FD +SKSVLH EMAKKNLFVKRGIVAD+NAYDQSKRLRTGGDY+H+ Y +PSPFHP
Sbjct: 121 QDMLFDAESKSVLHIEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHSAYTAPSPFHP 180

Query: 181 P-APVWGPHGYMAPPPPPPYDPYGGYPVPPVPMP--APVPAPSSYVPVQNTKDNPPCNTL 240
           P APVWGP GYMAP PPP YDPYGGYPVPPVPMP  APVPAPSSYVPVQNTKDNPPCNTL
Sbjct: 181 PPAPVWGPQGYMAPTPPP-YDPYGGYPVPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTL 240

Query: 241 FIGNLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGAVI 300
           FIGNLGENINEEELRGLFS+Q GFKQMK+LRQERHTVCFIEFED+N+A++VHHNLQGAVI
Sbjct: 241 FIGNLGENINEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHNLQGAVI 300

Query: 301 PSSGSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ 348
           PSSGS+GMRIQYSKNP+GKRKDS H  A+  A        +GA P MTYQ
Sbjct: 301 PSSGSVGMRIQYSKNPFGKRKDSGHPIASPGA--------NGAPPSMTYQ 328

[Close]

BLAST of Spo04527.1 vs. UniProtKB/TrEMBL
Match: A0A067DU05_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020297mg PE=4 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.400e-138
Identity = 270/352 (76.70%), Postives = 291/352 (82.67%), Query Frame = 1

		  
Query: 1   MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDN--RLCDDVI 60
           MAGAGIH YH QQWPP PAPPPPP+ AA  P          PPPP  P DN  R+  D  
Sbjct: 1   MAGAGIHTYH-QQWPPAPAPPPPPAAAAAAP----------PPPPPVPYDNTNRIAHDE- 60

Query: 61  FCLVRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKD 120
              VRTIFI+GLP+DVKERELQNLLRWLPGYEASQ+N KGE PMGFALFS+ + A AAKD
Sbjct: 61  ---VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 120

Query: 121 ALQNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPF 180
           ALQ M+FD ++KSVLHTEMAKKNLFVKRGIVAD NAYDQSKRLRTGGDYTHTGY++PSPF
Sbjct: 121 ALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPF 180

Query: 181 H-PPAPVWGPHGYMAPPPPPPYDPYGGYPVPPV--PMPAPVPAPSSYVPVQNTKDNPPCN 240
           H PPAPVWGPHGYMA PPPPPYDPYGGY VPPV  P PAPVPAPSSYVPVQNTKDNPPCN
Sbjct: 181 HAPPAPVWGPHGYMA-PPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCN 240

Query: 241 TLFIGNLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGA 300
           TLFIGNLGE+INEEELRGLFS Q GFKQMKVLRQERHTVCFIEFED+NSAS VHHNLQGA
Sbjct: 241 TLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGA 300

Query: 301 VIPSSGSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ 348
           VIPSSGS+GMRIQYSKNP+GKRKD +H+ A+  A        +G  P + YQ
Sbjct: 301 VIPSSGSVGMRIQYSKNPFGKRKDGSHAIASPAA--------NGVPPALNYQ 328

[Close]

BLAST of Spo04527.1 vs. UniProtKB/TrEMBL
Match: V4S0T9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026062mg PE=4 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.400e-138
Identity = 270/352 (76.70%), Postives = 291/352 (82.67%), Query Frame = 1

		  
Query: 1   MAGAGIHPYHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDN--RLCDDVI 60
           MAGAGIH YH QQWPP PAPPPPP+ AA  P          PPPP  P DN  R+  D  
Sbjct: 1   MAGAGIHTYH-QQWPPAPAPPPPPAAAAAAP----------PPPPPVPYDNTNRIAHDE- 60

Query: 61  FCLVRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKD 120
              VRTIFI+GLP+DVKERELQNLLRWLPGYEASQ+N KGE PMGFALFS+ + A AAKD
Sbjct: 61  ---VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 120

Query: 121 ALQNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPF 180
           ALQ M+FD ++KSVLHTEMAKKNLFVKRGIVAD NAYDQSKRLRTGGDYTHTGY++PSPF
Sbjct: 121 ALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPF 180

Query: 181 H-PPAPVWGPHGYMAPPPPPPYDPYGGYPVPPV--PMPAPVPAPSSYVPVQNTKDNPPCN 240
           H PPAPVWGPHGYMA PPPPPYDPYGGY VPPV  P PAPVPAPSSYVPVQNTKDNPPCN
Sbjct: 181 HAPPAPVWGPHGYMA-PPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCN 240

Query: 241 TLFIGNLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGA 300
           TLFIGNLGE+INEEELRGLFS Q GFKQMKVLRQERHTVCFIEFED+NSAS VHHNLQGA
Sbjct: 241 TLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGA 300

Query: 301 VIPSSGSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ 348
           VIPSSGS+GMRIQYSKNP+GKRKD +H+ A+  A        +G  P + YQ
Sbjct: 301 VIPSSGSVGMRIQYSKNPFGKRKDGSHAIASPAA--------NGVPPALNYQ 328

[Close]

BLAST of Spo04527.1 vs. ExPASy Swiss-Prot
Match: RBPS2_MOUSE (RNA-binding protein with multiple splicing 2 OS=Mus musculus GN=Rbpms2 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.700e-12
Identity = 41/93 (44.09%), Postives = 52/93 (55.91%), Query Frame = 1

		  
Query: 62  VRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDALQ 121
           VRT+F+SGLP D+K REL  L R   GYE S I      P+GF +F S   A AAK+AL 
Sbjct: 24  VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNALN 83

Query: 122 NMVFDVDSKSVLHTEMAKKNL-FVKRGIVADAN 154
            + FD ++   L  E AK N    K  ++A  N
Sbjct: 84  GIRFDPENPQTLRLEFAKANTKMAKSKLIATPN 116

[Close]

BLAST of Spo04527.1 vs. ExPASy Swiss-Prot
Match: SCW1_SCHPO (Cell wall integrity protein scw1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=scw1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.900e-12
Identity = 65/208 (31.25%), Postives = 97/208 (46.63%), Query Frame = 1

		  
Query: 133 LHTEMAKKNLFVKRGIVADA-NAYDQSKRLRTGGDYTHTGYASPSPFHPPAPVWGPHGYM 192
           ++T +A+  L  ++G  A   N+  QS   R     +     SP P  P      P    
Sbjct: 328 INTNVARNYLSSEKGYSAHTQNSSAQSPHPRVFSANSAFSTTSPPPLTPSTSRDYPFSAS 387

Query: 193 APPPPPPYDPYGGYPVPPVPMPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENINEEEL 252
              P  P+  Y         +PA  P  ++         NPPCNT+++GNL  + +EEEL
Sbjct: 388 TISPSTPFSAYSSSHGIHQRIPASTPTNTN-----PADQNPPCNTIYVGNLPPSTSEEEL 447

Query: 253 RGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGAVIPSSGSIGMRIQYSK 312
           + LFS Q G+K++    +    +CF+EFE++  A     NLQG  + SS   G+R+ +SK
Sbjct: 448 KVLFSTQVGYKRLCFRTKGNGPMCFVEFENIPYAMEALKNLQGVCLSSSIKGGIRLSFSK 507

Query: 313 NPYGKRKDS----NHSAAAINAAAAPMN 336
           NP G R  S    NH+    N  +  MN
Sbjct: 508 NPLGVRSSSSSHNNHNGNVRNLHSGSMN 530

[Close]

BLAST of Spo04527.1 vs. ExPASy Swiss-Prot
Match: WHI4_YEAST (Protein WHI4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=WHI4 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.800e-12
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 1

		  
Query: 224 PVQNTKDNPPCNTLFIGNLGENINEEELRGLFSIQSGFKQMKV---LRQERH-------T 283
           P      NPPCNTL++GNL  +  E+ELR LFS Q GF+++     +    H        
Sbjct: 522 PANPADQNPPCNTLYVGNLPPDATEQELRQLFSNQQGFRRLSFRNKMNSHGHGNGHGHGP 581

Query: 284 VCFIEFEDLNSASHVHHNLQGAVIPS-----SGSIGMRIQYSKNPYGKRKDSNHS 324
           +CF+EFED++ A+     L G+ +P      +   G+R+ +SKNP G R  ++ S
Sbjct: 582 ICFVEFEDVSFATRALAELYGSQLPHPRPSLNNKGGIRLSFSKNPLGVRGSNSRS 636

[Close]

BLAST of Spo04527.1 vs. ExPASy Swiss-Prot
Match: MDE7_SCHPO (RNA-binding protein mde7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mde7 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.900e-12
Identity = 36/99 (36.36%), Postives = 56/99 (56.57%), Query Frame = 1

		  
Query: 228 TKDNPPCNTLFIGNLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASH 287
           T  N PCNT+++GNL     E++LR  FS + G++++    +    +CF+EFE++  A+ 
Sbjct: 595 TDHNSPCNTIYVGNLSNPDQEKKLRLAFSKEKGYRRLCFKIKGNSPMCFVEFEEVCHAAK 654

Query: 288 VHHNLQGAVIPSSGSIGMRIQYSKNPYGKRKDSNHSAAA 327
               +QGA +      G+R+ YSKNP G R   N S  A
Sbjct: 655 AMEKMQGAALDDKIKGGIRLSYSKNPLGVRSTENLSTTA 693

[Close]

BLAST of Spo04527.1 vs. ExPASy Swiss-Prot
Match: RBPMS_CHICK (RNA-binding protein with multiple splicing OS=Gallus gallus GN=RBPMS PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 6.400e-12
Identity = 38/80 (47.50%), Postives = 47/80 (58.75%), Query Frame = 1

		  
Query: 62  VRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDALQ 121
           VRT+F+SGLP D+K REL  L R   GYE S I    + P+GF  F S   A AAK+AL 
Sbjct: 21  VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRAGAEAAKNALN 80

Query: 122 NMVFDVDSKSVLHTEMAKKN 142
            + FD ++   L  E AK N
Sbjct: 81  GIRFDPENPQTLRLEFAKAN 100

[Close]

BLAST of Spo04527.1 vs. TAIR (Arabidopsis)
Match: AT3G21215.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 452.2 bits (1162), Expect = 2.900e-127
Identity = 257/352 (73.01%), Postives = 280/352 (79.55%), Query Frame = 1

		  
Query: 1   MAGAGIHPYHHQQWPPVPAPPPPPS-TAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDVIF 60
           MAGAGIHPYH QQWPP  APPPP + ++A PP PPP    P PPP      NR   D + 
Sbjct: 1   MAGAGIHPYH-QQWPPAGAPPPPAAVSSAAPPHPPPIHHHPPPPPVLVDNHNRPPYDEL- 60

Query: 61  CLVRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHPMGFALFSSPEFAHAAKDA 120
              RTIFI+GLP+DVKEREL NLLRWLPGYEASQ+N KGE PMGFALFS+ +FA AAKD 
Sbjct: 61  ---RTIFIAGLPDDVKERELLNLLRWLPGYEASQVNFKGEKPMGFALFSTAQFAMAAKDT 120

Query: 121 LQNMVFDVDSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPFH 180
           LQ+MVFD +SKSV+HTEMAKKNLFVKRGIV D+NAYDQSKRLRTGGD TH+ Y SPSPFH
Sbjct: 121 LQHMVFDAESKSVIHTEMAKKNLFVKRGIVGDSNAYDQSKRLRTGGDCTHSVY-SPSPFH 180

Query: 181 -PPAPVWG-PHGYMAPPPPPPYDPYGGYPVPPVPMPAPVP--APSSYVPVQNTKDNPPCN 240
            PP PVWG PHGYMA P PPPYDPY GY  PPVPMP P P  APSSYVPVQN KDNPPCN
Sbjct: 181 PPPPPVWGPPHGYMA-PAPPPYDPYAGYHAPPVPMPTPPPIAAPSSYVPVQNIKDNPPCN 240

Query: 241 TLFIGNLGENINEEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGA 300
           TLFIGNLGENINEEELR L S Q GFKQMK+LRQERHTVCFIEFED+NSA++VHHNLQGA
Sbjct: 241 TLFIGNLGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGA 300

Query: 301 VIPSSGSIGMRIQYSKNPYGKRKDSNHSAAAINAAAAPMNTMSGAAPPMTYQ 348
           VIPSSGSIGMRIQYSKNPYGKRK+          +  P  + +GA   +TYQ
Sbjct: 301 VIPSSGSIGMRIQYSKNPYGKRKEGG------GYSFFPSPSANGAQGALTYQ 339

[Close]

BLAST of Spo04527.1 vs. TAIR (Arabidopsis)
Match: AT2G42240.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 115.5 bits (288), Expect = 6.400e-26
Identity = 107/304 (35.20%), Postives = 149/304 (49.01%), Query Frame = 1

		  
Query: 9   YHHQQWPPVPAPPPPPSTAAPPPLPPPNSVVPMPPPPHPPLDNRLCDDVIFCLVRTIFIS 68
           Y H   P +  PPPPP  + P P+   +SV     P H  +  R  D+V     RT+F++
Sbjct: 8   YSHYNLPAM-VPPPPPGVS-PIPITSAHSVYL---PTHVSIGAR--DEV-----RTLFVA 67

Query: 69  GLPEDVKERELQNLLRWLPGYEASQINQK-GEHPMGFALFSSPEFAHAAKDALQNMVFDV 128
           GLPEDVK RE+ NL R  PGYE S +    G  P  FA+FS  + A A   AL  MVFD+
Sbjct: 68  GLPEDVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAVMHALNGMVFDL 127

Query: 129 DSKSVLHTEMAKKNLFVKRGIVADANAYDQSKRLRTGGDYTHTGYASPSPFHPPAPVWGP 188
           +  S LH ++AK N   KR    D   ++  K+L++    T +G+ S   F  P      
Sbjct: 128 EKHSTLHIDLAKSNPKSKRSRTDDG--WESLKKLKSWNTTTESGFGS---FQTPGMSSSA 187

Query: 189 HGYMAPPPPPPYDPYGGYPVPPVPMPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENIN 248
           +  +       Y P     +  V   AP     S       K   PC TLFI N+G N  
Sbjct: 188 YNTIG------YSPAQSQGIANVAGRAPTSRKPS-------KAADPCPTLFIANMGPNCT 247

Query: 249 EEELRGLFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGAVIPSS--GSIGM 308
           E EL  +FS   GF ++K+       V F++F+D++ +S   H LQG V+ SS  G + +
Sbjct: 248 EAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLTGEV-L 280

Query: 309 RIQY 310
           R+QY
Sbjct: 308 RLQY 280

[Close]

BLAST of Spo04527.1 vs. TAIR (Arabidopsis)
Match: AT3G13700.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 81.3 bits (199), Expect = 1.300e-15
Identity = 85/295 (28.81%), Postives = 125/295 (42.37%), Query Frame = 1

		  
Query: 44  PPHPPLDNRLCDDVIFCLVRTIFISGLPEDVKERELQNLLRWLPGYEASQINQKGEHP-- 103
           PP  PL   L D+     + T+F+SGLP DVK RE+ NL R   G+E+ Q+   G     
Sbjct: 23  PPQLPL---LADEP--GAINTLFVSGLPNDVKAREIHNLFRRRHGFESCQLKYTGRGDQV 82

Query: 104 ------------------MGFALFSSPEFAHAAKDALQNMVFDVDSKSVLHTEMAKKNLF 163
                             + FA F+S  FA AA + L  + FD  + S LH E+A+ N  
Sbjct: 83  CKNLQFLFFFIPIFRKAVVAFATFTSHRFALAAMNELNGVKFDPQTGSNLHIELARSNSR 142

Query: 164 VKRG------IVADANAYDQSKRLRTGGDYTHTGYASPSPFHPPAPVWGPHGYMAPPPPP 223
            K        +V D    + SK   +  D +  G + P     P     P          
Sbjct: 143 RKERPGSGPYVVIDNRNKEISK---SQDDQSDEGDSDPDEVQEPGNSDSPKENDTTKSEA 202

Query: 224 PYDPYGGYPVPPVPMPAPVPAPSSYVPVQNTKDNPP----CNTLFIGNLGENINEEELRG 283
             +P                APS+   ++   +       C+TLFI NLG N  E+EL+ 
Sbjct: 203 DSEPDS-------------KAPSANGHLEKASEGGSGARACSTLFIANLGPNCTEDELKQ 262

Query: 284 LFSIQSGFKQMKVLRQERHTVCFIEFEDLNSASHVHHNLQGAVIPSSGSIGMRIQ 309
           L S   GF  +K+  +    V F +FE++  A+   ++LQG ++ SS   GM I+
Sbjct: 263 LLSRYPGFHILKIRARGGMPVAFADFEEIEQATDAMNHLQGNLLSSSDRGGMHIE 296

The following BLAST results are available for this feature:

BLAST of Spo04527.1 vs. NCBI nr
BLAST of Spo04527.1 vs. UniProtKB/TrEMBL
BLAST of Spo04527.1 vs. ExPASy Swiss-Prot
BLAST of Spo04527.1 vs. TAIR (Arabidopsis)

BLAST of Spo04527.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902219223\|gb\|KNA18250.1\|	5.3e-192	98.5	hypothetical protein SOVF_0723...	[more]
gi\|731351920\|ref\|XP_010687275.1\|	1.2e-154	84.0	PREDICTED: RNA-binding protein...	[more]
gi\|590614966\|ref\|XP_007023092.1\|	6.8e-139	77.4	RNA-binding family protein [Th...	[more]
gi\|1009152470\|ref\|XP_015894111.1\|	6.8e-139	76.9	PREDICTED: U1 small nuclear ri...	[more]
gi\|568878037\|ref\|XP_006492013.1\|	2.6e-138	76.7	PREDICTED: RNA-binding protein...	[more]

BLAST of Spo04527.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RFJ2_SPIOL	3.7e-192	98.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8BUT4_BETVU	8.1e-155	84.0	Uncharacterized protein OS=Bet...	[more]
A0A061GFC4_THECC	4.8e-139	77.4	RNA-binding family protein OS=...	[more]
A0A067DU05_CITSI	2.4e-138	76.7	Uncharacterized protein OS=Cit...	[more]
V4S0T9_9ROSI	2.4e-138	76.7	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo04527.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
RBPS2_MOUSE	1.7e-12	44.0	RNA-binding protein with multi...	[more]
SCW1_SCHPO	2.9e-12	31.2	Cell wall integrity protein sc...	[more]
WHI4_YEAST	3.8e-12	35.6	Protein WHI4 OS=Saccharomyces ...	[more]
MDE7_SCHPO	4.9e-12	36.3	RNA-binding protein mde7 OS=Sc...	[more]
RBPMS_CHICK	6.4e-12	47.5	RNA-binding protein with multi...	[more]

BLAST of Spo04527.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

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x 1


Match Name	E-value	Identity	Description
AT3G21215.1	2.9e-127	73.0	RNA-binding (RRM/RBD/RNP motif...	[more]
AT2G42240.2	6.4e-26	35.2	RNA-binding (RRM/RBD/RNP motif...	[more]
AT3G13700.1	1.3e-15	28.8	RNA-binding (RRM/RBD/RNP motif...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 65..125 score: 1.4E-6coord: 237..298 score: 2.
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 64..134 score: 0.035coord: 236..308 score: 8.
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 235..312 score: 12.134coord: 63..140 score: 8
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	3.30.70.330		coord: 226..312 score: 1.0E-19coord: 63..136 score: 3.2
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 63..150 score: 2.07E-17coord: 232..297 score: 2.07
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 342..347 score: 4.5E-116coord: 226..318 score: 4.5E-116coord: 62..157 score: 4.5E
None	No IPR available	PANTHER	PTHR24012:SF393	SUBFAMILY NOT NAMED	coord: 342..347 score: 4.5E-116coord: 226..318 score: 4.5E-116coord: 62..157 score: 4.5E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006421	asparaginyl-tRNA aminoacylation
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0006508	proteolysis
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0030001	metal ion transport
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006396	RNA processing
biological_process	GO:0006414	translational elongation
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009853	photorespiration
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0001731	formation of translation preinitiation complex
cellular_component	GO:0016020	membrane
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0046873	metal ion transmembrane transporter activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004816	asparagine-tRNA ligase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo02287	0.79	Barchart \| Table
Spo11643	0.76	Barchart \| Table
Spo14404	0.76	Barchart \| Table
Spo14380	0.75	Barchart \| Table
Spo24874	0.75	Barchart \| Table
Spo07417	0.75	Barchart \| Table
Spo22505	0.73	Barchart \| Table
Spo02928	0.73	Barchart \| Table
Spo01403	0.73	Barchart \| Table
Spo03626	0.72	Barchart \| Table
Spo13621	0.72	Barchart \| Table
Spo18874	0.72	Barchart \| Table
Spo01398	0.72	Barchart \| Table
Spo01535	0.71	Barchart \| Table
Spo02389	0.71	Barchart \| Table
Spo02904	0.71	Barchart \| Table
Spo24902	0.71	Barchart \| Table
Spo00580	0.71	Barchart \| Table
Spo05090	0.71	Barchart \| Table
Spo06002	0.71	Barchart \| Table
Spo25206	0.71	Barchart \| Table
Spo09139	0.70	Barchart \| Table
Spo18201	0.70	Barchart \| Table
Spo03527	0.70	Barchart \| Table
Spo18574	0.70	Barchart \| Table
Spo11850	0.69	Barchart \| Table
Spo07017	0.69	Barchart \| Table
Spo22939	0.69	Barchart \| Table
Spo11288	0.69	Barchart \| Table
Spo06318	0.69	Barchart \| Table
Spo07821	0.69	Barchart \| Table
Spo26994	0.68	Barchart \| Table
Spo05064	0.68	Barchart \| Table
Spo05415	0.68	Barchart \| Table
Spo05949	0.68	Barchart \| Table
Spo07016	0.68	Barchart \| Table
Spo15160	0.68	Barchart \| Table
Spo17662	0.68	Barchart \| Table
Spo20647	0.68	Barchart \| Table
Spo24416	0.68	Barchart \| Table
Spo18849	0.67	Barchart \| Table
Spo05909	0.67	Barchart \| Table
Spo09376	0.67	Barchart \| Table
Spo01491	0.67	Barchart \| Table
Spo21186	0.67	Barchart \| Table
Spo11679	0.67	Barchart \| Table
Spo06571	0.67	Barchart \| Table
Spo22936	0.67	Barchart \| Table
Spo18505	0.67	Barchart \| Table
Spo00968	0.67	Barchart \| Table
Spo14754	0.67	Barchart \| Table
Spo09495	0.66	Barchart \| Table
Spo03802	0.66	Barchart \| Table
Spo15646	0.66	Barchart \| Table
Spo17495	0.66	Barchart \| Table
Spo03353	0.66	Barchart \| Table
Spo17903	0.66	Barchart \| Table
Spo05935	0.66	Barchart \| Table
Spo19441	0.66	Barchart \| Table
Spo05114	0.66	Barchart \| Table
Spo04204	0.66	Barchart \| Table
Spo10565	0.66	Barchart \| Table
Spo21414	0.65	Barchart \| Table
Spo10553	0.65	Barchart \| Table
Spo10147	0.65	Barchart \| Table