Spo04573 (gene)

Overview
NameSpo04573
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUbiquitin domain-containing protein
Locationchr5 : 50491995 .. 50500911 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAAAGTGGACTCTTCCATCTCTCTAAATAAGAGGTCTACCGTGGTAGGGTCATAAATCTCATAATTATCAAACAAATAATTTCATTACATATCCAAATCACTTTCTAAACAGCGATCCATTTCTTTTCAGCTCTTCTTCTTCACCCTTAAATACAAATTCCCAATTTCTCTCTCCTCTCTCTCTCTTGAATGTCTTGATTCTTCCTTCCGTTGCTGATTCATTGTTCTCACGCTAACTTCTAGAGAAAGAAAGTAGAGAGAGATTCGATCGTCTTCTTCGCTCGGGTTTTTCCGCCATGGGTTGCATATCTTCGCGTGACAAAGCTACTACTTCTGGTGAGCTTCAACTTCCCTTTTTTGTCTTTGATTTTCAAGAAACTTAATTAAACATTCAATTTTTTCATTTGTTTGTGGCTCTTGATCCTGCATTTCGTCGAATATGTCCAGTTCGTAATGTTGATTTTTGACAGTATAGTGGAGCTTTTTGTTTGTTGATTTCGACACTTTCTATGATTAAGTTGAATTTGTGATGCTGAATTACTGATATAGGCGAATTTAGTAACAAATTTCTGGCTTAATTCCTTAATTGGAAGTGTAATTGTTTGAAGCAGTGAATTCTTGATTATGATTATGACTTATGAGTAGTGACAAAATTGCGTTGTTCGAAATGCTTAGCTTTCTTCATTGAATGTGCAATAATTCAAATTGACTTACCTAGGCTTTTGTGGTGACTTTTTCTTGGTTGAATGTGCACTGTGATTCTTTGAAGTAGTTATCAATAATTCTTGAACTGAATAGTGAAGGTGTGACCTTGCGCTGTCCTGATTGCTTCTGTTTCTTCATTGAATGCAATCATTCAACTTCGTAAAACGTAAAGTATTGTGATAATTTTGTCTTTAAGTTGATAAAGATAAGAATTAGTGATTGATTCGAGTTGTAAAGAACGTGCATCATTATGTGCTAATCAAAACAGGATTTGAGATTTTACTGTTTGAGCGTACAGTTTCTGGAATAATACATATTTTACGCTGCTGTCTAGTTCATTTGCTTAATTGGGAAGGAAAAGTTATCTATATGTGTTTTGTGGATAACAGTCGGTTCTTCATCACAGCTTTAGGATTGTTTGGCTGTTCAATGTTGTTCTTGTGGGGGACGGGAGAAACGGTAGATGAAAAGGTTTTCTTAGCGGATAATTAGGGGTAATCTTTATTCATGACCTTTAGGATTTGTTTGGCTGTTCAATGTTGTTCTTGCGGGGGACGGGAGAAACGGTAGATAAAAAGGTTTTCTTAGTGGATAATTAGGGATAATCTTTGTTCATGTTGTCATCGTTACCCTCTTTTTATCATATTGAGACATTGCTGTTTGGCAGTTCACATGTTTATCGTGTATTCTGGAATTTGATTTATGTTTTACTTGGTAACGCCGTGGCATTCTGAGTATCCTTTTCTAGTAGTTAGCCTCAAATCTAAGTTGTCAGGGTAGAGGAGTTAAGATAATAGTTTAAAAAATGTTGATGATGAGCCTGGTCACTGTCAAATAGGTGCTCATGCCAGTTATATCCTTGATTAGTTTATTGGTCTGCAAAGTCATTGTTTTGGAGTGGCAAATTTAATTGGATATCTTATGAAAATTTCCCATGTGTTTTGGGTTGAAACTAGGTATAAAGTGTCCATATTCATGTCAAGGTGTTTCAAGGTGTCAGGGATTTAATACGGGTACTTAGATGAATTCAAGAGTTTGAGTAACATAGCAAATGAGTGTCAAAAAGCATCTCAAACCCTCATAATGAAATATTTGACTTGATTTCTCTAGGATTTCCTTATCATTGTTTGGACATTTCCATACTCTTCCTATCAATCAATTCAAGTAGGGGAATTTAGCGAAATACATTCATAAACTATCACTGTTTTTGCAATTTTTTGCGACCATTCTCAACTAGGTCACTTTTATTTTCGGACAGAGGAGTACGATTACCAACTTTGTTGTTTATCATCCCTGATATGTCTCTGTCTCTGACCGTCTTTGTTGTTTATCATCCTCCTCTGTTGTTTCTCAAATTTTTCATCACTGCATCATTATTACCTGTCAGCTTTTTGTGGAACTTCATAGTTGGAGAAAGGTTGGTCCAGAACTAGCATAAAAGGAATCTTCAACATGATCAGTATACGAAAACGTAACTTATTTAGTGACCTAGATGCGGGTTTAGATTGGTGGTCTGAAACATTTTAAGGTTAAGGAATACCTGTCAATCTGAACCAATTGAAGAACATACAATGCTCCTGATTTATAGAATTGAATAATGTTGTGCATGTATAAAAACGTCACACCTTGAGCTCTATTTTGTAGAACTTATAAGCTAAATACTAAGATTGCAGATTAATTTTTTGTCAATTGTTAATACATTTATTCCCTCCAACATATTATTTAGCAAAAGAAATTGTTAAATGGAAAACACAAACTATTACCATCAATTCTGAGCTGTGAAACATAACCGTTTCTTTCATTTTTATTTATTTTCCTTCTACATTTTCATGCATATTGCATTTTATTGTTCTTGTATCTTAGAATCTAGATGCCCGGTGAAGTTATATGCTTCAGAGAGGCTTCTTGCAGATACTGATGTTTTATTTTCTATGGTTGAAAATTTGAAATAACTGCATACTGCATAAGGTTTTGGAATATTCTGTCTACAATAGTGATTTGGCTGATGTAGCACAAACATTTAGATTTTGCATTTTTGATAAAATTTTAGTGACACGATTTGTATTTGTTAAGCCGGTCTTGTTTCTTCATCGCAGTCGTGATAGTTAAAAGTGTCTTAACTGATTATTATTTTTCAATGGAGTTGAATACAGATTAAAAAGTGGGAAGTTTTAGTATGCCATACAGATTGCTTAATTCATCTTACTCAGTTGTGATTCTTGTAAATACCTGTTGCTAATTTTAGGTATGGTGCTATTTATTTGATCTAGATTGCTATTCTTAACTCCTCCCTTTTCCTGTATATGGAAACAATGAAAATAAAAGGGGTTCCTCGTATCTTTTTCCCGGTTGTATGTTAATAATCTATCATTTCAACTGGACTGCAAATGGCTGATTTTTTTCTTGAATGTGAAGTTGGAGGATTTATGCCAGTTTCCTCTTTGCAATTCTTTTCTTTAGTGCTAGTGTCATTTGTATCTTCTCACTTCATTTTTGTCCTTATTTTACTTTGTATATTATTGGAAGTTAGTGAAATGGAGTGGAATAAGTTGTAAGATCAATCAACTGCTACTATTCCTAAGCTGGTGCATTTATCTTTTAGTTTCCCCTAATTCCCCGTACTTTCTTATACATTCTATGTGCTCATTCAATCCCTGAGTATAAAATTCTGGAGATAGGAAACACAAAAGATTGAAGTTACTCAGTCATCTTATAGGAATGCCAATCAGTTTCAATAGGCAGCTTCTGTTTGTTTCTGAAACTCAGTTGAATTTTAGTCAAATATTTTGGGGTAAAAGCATTTACCATTTGGGTTGATGTTGACGAGTTTGGTAGCTTGTGAAAGCGAGTGTAGATTTTCTCAACTGAGATATAATACTTTATATTAGTTACAGTAAGAAATAGAATTTGATGATTACAGTAATCCAAAGTTAGGCGTATAAGCGACTTACGCGACTATATGGTTATATGATGATTGTAAGTTGTGTGTACACTTGCTAATATGAGAACATTCCCCTGGCGTAAGCTGATTACTGGATAGGAAAGTGGCATTATAACCTCTTCTCTATCTCTTTGTGTTTGTAGTTTTAGGACATGAAACTTTAAAGTTTGAATGGCTCATTGTGTTATCAGGCTGATGGATCCAAATCCTTTCAGGTTTCATGCTTGTTAGAGAAGGAACGTGGATGCATTGATTTTTAATGTTTGAACTGTGGGTACCAGTACGAGTTCTTCATTTAAGATTCCAACACCTGTTGTCGTTTGTTCAGTGAAACTGCTGTACTGATCTATAGATTATTGTTGTTTGTAATTCTACGTATTAAAAAATCTGGATGCGTGTCTAATGGTTTATCTCTATGCCTATACGACTCTGCTATTTTACCCTTGTCTGTCCCCCTATGTTTTTGGTTTTAAGGAAGTGAGAGACCTTTAAGCCTGTCACTATACTTGGCATGTTGCATTGCTGTCCCTTTGAAACCATTTCTCTGTTTGTGCCTTGACAGATGGTACTAAGAAGATTCGAAAGCCAAAGCCATGGAGGCACACGGAACCAATAACTAGGGCACAACTGAATAAGATGCGTGAGGAATTCTGGGACACTGCACCTCACTATGGTGGCACGCGAGGTAATTGTTTATTCAACATGCAATTTTCTGCATTTGAACTTCATAGTAATTGTCTGTGTAGGTGTTATGGTCTTTAGAAGTTCCTGGCTTGGCGTGTTGCAATATCTGCAACAGTATGTATGGCTGCTTAGATTCTCCTTTCATGTGTGGACGTTTTTGCATGTAGTGCCACATGTGGTCTTCTATTATTATGTTGTGTATGTAACACCAAATCCATGACTTAGTGCCTGATGTTGTGCCTCTGAAACCTTTTATGATGTCAGGACTCAGGAGTGAGGGATATAATGGGTAGTAGACTAGTAGCATGTTTCTGTTTTAACGCGTGTTTGCTATAAATTTAGGAAAGGAAATGGAATGGAATGGAAACAAATAAGGAGGGAAAAGGTAATGTTAACTATTACCATTATTAGTTGTTTGTATAGCTTAAGAAAGGAATCACTTGTATCAAATTGGGGATTGAGGAGGATAACAATTTGGTTACCATAGGGTTGGGAAAGGTAACAAATTGTGCTAATGGTTACGCTCCGGAAATAGATTATGTTACTACAACTCTCACACCAAACATTAGATAATGGAAATAGTTAAGTGATTCTATTTCCATCACTTAACATAATTGCTGTTGTGTTCAAATTGCAGTTGGTAATGTAGGCGTCCCCCCAGTAGTACTCAAAATTGTAGTAAAGTAATTGACAAGTCAATGCATAATGTAGATTGCAGATCATGGTCAAGGAACATGACAGCACTTCAACTATGCAAACTATGGCATTTCTACTTTTCTAGCTCTAAGGATTTTGATTGATGTTTCTTACTTTCTTTTGAGGCCTAATCTGAAGGACTTTCTTTTTCTGGGGGCTGGTAGACTGGTAGTTACTGTGATTTAGACCGTTCAATTACTAGATTCCAGATGTTACTAGGCATTCTTAGATGCGAGGTCAATTTAGCGAAAAAATTACTTATCAAATATTTCATGTGGACATAAGTTGGAGAGCTTGATCAGAATCATCTGTCTAGGACATGTTTGATATAGTCTTGCTCCTCTAAGAAGGGGTTATGATGTCCTGTTTTTGGCATGCTGCAATTTGTGTAACAAAAGAGTACTCCATCTCTGTCTATATACTTGCTTACTTCTGAACATAATCCCCCCTTCTTCCGGTTGTTGGAGTTGTCAAAATGTAAAGGTCATGCACATTAATAAATGTGTAAAAGGGTGGGGGAATGGTTTTCTATAAGTTTATTTTTGTTCTACTCTATCCTTGGTATAGGGGATGATGGAATTTCTTAAATTAAACAAGCTGTAAAAAGATTGTGGAAGATAGACGTATTGAGTGAGTTTTTAGTATACCTGCATGGAAGCAGGTAGAATTTCATAGTACAGGTTTTGATTGGTATTGATCATAAAGAAACTCTCCTAACTGATTAGATTGTTTTTACTCGGTACAACTTCTCTAGATAGCATGGATGATTCGGTATGAAATATAGTATCCCTAACCATGTTAAACCTTTTCTTTGGAGTTGGACTGTGTACTTAGGGTAAATCTACACTCTTGCTCAACTATAGATGTAGCAATTTCATCTAATATTTTTGGTTTTTAATGCTAATACATTCTTGGGTGCCAAGGGCCACATGGCCCACACTTACACTAGGCTTCTATCATGGAGTTTGCTAGTAGCGGCAGCCCTCAGGGAAAGGTATAAGAAACCCACCTTAGTCCTAAGCCCAAAGACTTGCCCCACCTCATGAACTTGTAGAAAGAAGCTTTCAGTATTTTGTATCCTGGTTTTGGTGGTAGAAAGGCGATAAGCTTATGAACTCATCTAAAGTTTGTTGAGGAATCCTGTGTGCATGTGATGTGCTATAGTCTGTTCAGTGGGGGAGACAATTGCTTTTTCGCTGATCCTCCCGGTAGGTGGGTGGGGAGACTTGCTACAGATTCTAATGGCAGATTTTGAGGACAGATACTTGAGTTTTTGAGAATTGAGAGTACGACAACAACAACAAAGCCTTAGTCCCATAAAGATCTGGGCTCCCCTAACATGAACCATCAAAAGGAACCTTTCGCGAAACATGAATAAATAAATAAAGTAAAAGGTTATGTTAAAGATACACGCAAAAATGAAAGTGAGGGTAATGCGACACGAAAAATAAGAAACAAGAAAACAAGGTCAGTTTAAAGAAAAACACAATTTGAGGAAGAAAAAAAACATCCTAATGGGAGAGAAGGCATGTTGAGTTGTCGGCATATATTATCTCCCGCCACTCAGTTATCTGACGTCATATTTTCCTAATTCCCCAATAAATTTTTAATATCACTCTCAATCACCCTCTTCCAAGTTTGTTTCGTTATACTCCTCATAATTTCATCTGTTTCTCACTCTTCAAGCCTTTTAAACGACGCATAATTGGTCTTCGTCTTACATGGCTAAACCACCTTAATCGATTATCCCTCATCTTGCTCTCAGTCGATGTAGTCCCTACTTTCTTCCTAATTACCTCATTCCTCGACACATCCTTTCTTGTATGGCACACATCCAATGCAAAATACGCATCTCCGTCACATTCAAAGCATTGTTTCAGAGCTCTAAATTTTGTACCATATACCATACCATATAACATTGCAGGTTTAGTTATCATACGGTGGAATTTTTCCTTCGATCTATGGGGCACATAGAAATGACATAGCACTCTTCCACTTAATTTAATTGTATGGGCAACATCTCCATCCAACTCGCCATCTTTTTGGATAATAGATCCTAGGTAACAGAAATGTTAACCTTGGACAATCCACTCATCAATCACCACTAAACTTACACTCAAAATATTATGTTGCCACACTCTCTCAATTCCAAAGTATATCCCCATCATTCCAACTTAATTTCTACGCCATGAGAATTGAGAGAGTCTGGTACAAATATTTTGTGTTTGTTTATTTGGCCGTTTTATAGATTTTTTAACTAGTAAATATGCTCTCGCAGTCTGTTGAACGACCTCTGTTTTAATTTGAACCTCTTTCCAGTTGCTACTAGCTGTATACTTTAAATTGGCAAATATTGCTTTCCAAATTGTGTGTTAATGTGAGTGTCATGCTGGGTTTGAATTATGTCTTAAGCTATGTTTGGTTTTCCCAAAGTTCTATGACAAGCATTATAGGCTAAATATTTATGCTTGAATTGTGCTTTATGTCAAAGTATTTTCTCCAAAATTTTCATGACAGGGACACATGTTGACTCGTATTTAGCTTATTTGCTAGTCAACAGTTACTCATTCTGTGTGGTCTGTTGCCACGTTGATAACTACGATTTGTAGTTGACGAAGATTACCTATAGTCGTTGCGTCCTATTACATAATGTTTCTTTAACATGTAAATTCACTGCAAGATTTCTCCTTGTTTAGTCACTTCTACCTTCTTTGTTTTCTTGCTTGCCTTTGTAGACCAATTTATTAAACTATGCAATAGGACCGTTGTCAGTTCCTTTGATTCACATACGATGGAAGGTTTCTTCATATGATCAATGAATAGCTGGTGCTGGGAGATTTGTCAAATTTCTTTTGCTATACTTCGTATTATATTGTTATTTGCCCTGTACATGTTAGCTTTACATTTATTAGGACCTTCTGATGTTTGTGTTACAGTCACTATGTTGCTTGTTAACTTGTCCTCATATTGTTGGATGTAAGAACTTCCTAATGGTGGGCGGGTGTCATATTTTAGGATAAATGATGAAAACTTTTTCTTATCAGAAATCTGGGATGCACTCCGTGCTGCTGTGGACGCTGATCTGAACTTGGCACAGACAATTATCGACAGTGCTGGAGTAATTGTGCAAAATCATGACCTGACTGTTTGCTATGATGAGAGAGGTGATGTACCCATTCAACTTTACCTTAACTTAAATTTTTATTTCAGCAACTGCCTAAGTGTTGTTTTAAAAACTTACTTTGAAGTCTTATTTTGCTTTTGCAGGTGCAAAGTATGAACTGCCTAATTATGTTATGAGTGAGCCTACAAACTTGATCAGTGACCGTGAATCTTGAGAACTGGAAGTTAAACCAAAATTGACAAGGCTGTAAATCATGTAAAGCAATACTATAGTGGTTTTTTCATGTAGACCTGCAGGAATATCTGCACAATTTTTTTTCTGCCGTATATCCTATCGGAAATAGGCTCATTGACTCAACTCAGCTACTGAGGGGTGAATTTAGATGCATCTGGAGAAACATGTGGTGTACTATTCTACTTCAGTTTATTTGTTGCTACGCTATGTGCTAGAGTTTACAGATGATAGGTTATCCAAGCAACTGAACAAAGATACTAATTGCTCTTAGTCTGGTGGTGATTCCCACATATATAGTTCCTCGTACGTGCTCTGCAAATATTTCATTAGGGGTTCATAATTTTTAGCAGTGACTCTGTGTTGCAGTCCGGTACATTTTGATCGTCTCTTGTTTGTCCTCTTTGTGTATTCCTTTTTGGTAGAAGTTTATCCTCTTCTTTGCATATTGTAAAATGTTGGTAATTGTTGGCAGTTCAGGATGGTGCAGCAGCGCATATGCACACCGAAGATACAGCAACCCAGGTGAATTGA

mRNA sequence

CTAAAAGTGGACTCTTCCATCTCTCTAAATAAGAGGTCTACCGTGGTAGGGTCATAAATCTCATAATTATCAAACAAATAATTTCATTACATATCCAAATCACTTTCTAAACAGCGATCCATTTCTTTTCAGCTCTTCTTCTTCACCCTTAAATACAAATTCCCAATTTCTCTCTCCTCTCTCTCTCTTGAATGTCTTGATTCTTCCTTCCGTTGCTGATTCATTGTTCTCACGCTAACTTCTAGAGAAAGAAAGTAGAGAGAGATTCGATCGTCTTCTTCGCTCGGGTTTTTCCGCCATGGGTTGCATATCTTCGCGTGACAAAGCTACTACTTCTGATGGTACTAAGAAGATTCGAAAGCCAAAGCCATGGAGGCACACGGAACCAATAACTAGGGCACAACTGAATAAGATGCGTGAGGAATTCTGGGACACTGCACCTCACTATGGTGGCACGCGAGAAATCTGGGATGCACTCCGTGCTGCTGTGGACGCTGATCTGAACTTGGCACAGACAATTATCGACAGTGCTGGAGTAATTGTGCAAAATCATGACCTGACTGTTTGCTATGATGAGAGAGGTGCAAAGTATGAACTGCCTAATTATGTTATGAGTGAGCCTACAAACTTGATCAGTGACCTTCAGGATGGTGCAGCAGCGCATATGCACACCGAAGATACAGCAACCCAGGTGAATTGA

Coding sequence (CDS)

ATGGGTTGCATATCTTCGCGTGACAAAGCTACTACTTCTGATGGTACTAAGAAGATTCGAAAGCCAAAGCCATGGAGGCACACGGAACCAATAACTAGGGCACAACTGAATAAGATGCGTGAGGAATTCTGGGACACTGCACCTCACTATGGTGGCACGCGAGAAATCTGGGATGCACTCCGTGCTGCTGTGGACGCTGATCTGAACTTGGCACAGACAATTATCGACAGTGCTGGAGTAATTGTGCAAAATCATGACCTGACTGTTTGCTATGATGAGAGAGGTGCAAAGTATGAACTGCCTAATTATGTTATGAGTGAGCCTACAAACTTGATCAGTGACCTTCAGGATGGTGCAGCAGCGCATATGCACACCGAAGATACAGCAACCCAGGTGAATTGA

Protein sequence

MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDALRAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISDLQDGAAAHMHTEDTATQVN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04573.1Spo04573.1mRNA


Homology
[Close]
BLAST of Spo04573.1 vs. NCBI nr
Match: gi|902171861|gb|KNA08056.1| (hypothetical protein SOVF_166170 [Spinacia oleracea])

HSP 1 Score: 240.0 bits (611), Expect = 2.400e-60
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1 

		  

Query: 1   MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDAL 60
           MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDAL
Sbjct: 1   MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDAL 60

Query: 61  RAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD 115
           RAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD
Sbjct: 61  RAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD 114
[Close]
BLAST of Spo04573.1 vs. NCBI nr
Match: gi|731369717|ref|XP_010665504.1| (PREDICTED: ubiquitin domain-containing protein 1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 197.2 bits (500), Expect = 1.800e-47
Identity = 91/117 (77.78%), Postives = 103/117 (88.03%), Query Frame = 1 

		  

Query: 1   MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDAL 60
           MGC+SSRDK      TK++RKPKPWRHTE ITR QLN+MREEFWDTAPHYGGTREIWDAL
Sbjct: 1   MGCVSSRDKGAAGS-TKRVRKPKPWRHTEAITRTQLNRMREEFWDTAPHYGGTREIWDAL 60

Query: 61  RAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISDLQD 118
           RAA +A+L++AQTIIDSAGVIVQN DLT+CYDERGA+Y+LP YV+SEPTNLI D  D
Sbjct: 61  RAAAEAELSMAQTIIDSAGVIVQNPDLTLCYDERGARYDLPKYVLSEPTNLIRDNND 116
[Close]
BLAST of Spo04573.1 vs. NCBI nr
Match: gi|747076488|ref|XP_011085320.1| (PREDICTED: ubiquitin domain-containing protein 1-like [Sesamum indicum])

HSP 1 Score: 188.7 bits (478), Expect = 6.400e-45
Identity = 90/114 (78.95%), Postives = 99/114 (86.84%), Query Frame = 1 

		  

Query: 1   MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDAL 60
           MGC  SRDK   S  +KKIRKPK W+H+EPITRAQL +MREEFWDTAPHYGG +EIWDAL
Sbjct: 1   MGCAGSRDKGDES--SKKIRKPKAWKHSEPITRAQLMQMREEFWDTAPHYGGRKEIWDAL 60

Query: 61  RAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD 115
           RAA +ADL+LAQ I+DSAGVIVQN DLTVCYDERGAKYELP YV+SEPTNLI D
Sbjct: 61  RAAAEADLSLAQAIVDSAGVIVQNPDLTVCYDERGAKYELPKYVLSEPTNLIHD 112
[Close]
BLAST of Spo04573.1 vs. NCBI nr
Match: gi|922506833|ref|XP_013590184.1| (PREDICTED: ubiquitin domain-containing protein 1-like [Brassica oleracea var. oleracea])

HSP 1 Score: 183.3 bits (464), Expect = 2.700e-43
Identity = 83/114 (72.81%), Postives = 99/114 (86.84%), Query Frame = 1 

		  

Query: 1   MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDAL 60
           MGC  S  ++      KKIRKPKPW+HT+PIT+A+L KMREEFWDTAPHYGGT+EIWDAL
Sbjct: 1   MGCAGST-QSQAEGPVKKIRKPKPWKHTQPITKAELVKMREEFWDTAPHYGGTKEIWDAL 60

Query: 61  RAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD 115
           RAA +AD++LAQTI+DSAGVIVQN+DLT CYDERGAKY+LP YV+SEPTNL+ +
Sbjct: 61  RAAAEADISLAQTIVDSAGVIVQNNDLTTCYDERGAKYDLPKYVLSEPTNLVEE 113
[Close]
BLAST of Spo04573.1 vs. NCBI nr
Match: gi|661898870|emb|CDO96864.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 183.3 bits (464), Expect = 2.700e-43
Identity = 86/114 (75.44%), Postives = 97/114 (85.09%), Query Frame = 1 

		  

Query: 1   MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDAL 60
           MGC  SR K    +  KKIRKPKPW+H+EPITRAQL +MR+EFWDTAPHYGG +EIWDAL
Sbjct: 1   MGCAGSRAKK--EEPVKKIRKPKPWKHSEPITRAQLVQMRDEFWDTAPHYGGRKEIWDAL 60

Query: 61  RAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD 115
           RAA +ADL LAQ IIDSAG+IVQN DLT+CYDERGAKYELP YV+SEPTNLI +
Sbjct: 61  RAAAEADLTLAQAIIDSAGIIVQNPDLTICYDERGAKYELPRYVLSEPTNLIRE 112
[Close]
BLAST of Spo04573.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QN84_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_166170 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.700e-60
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1 

		  

Query: 1   MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDAL 60
           MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDAL
Sbjct: 1   MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDAL 60

Query: 61  RAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD 115
           RAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD
Sbjct: 61  RAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD 114
[Close]
BLAST of Spo04573.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B621_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g200000 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.300e-47
Identity = 91/117 (77.78%), Postives = 103/117 (88.03%), Query Frame = 1 

		  

Query: 1   MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDAL 60
           MGC+SSRDK      TK++RKPKPWRHTE ITR QLN+MREEFWDTAPHYGGTREIWDAL
Sbjct: 1   MGCVSSRDKGAAGS-TKRVRKPKPWRHTEAITRTQLNRMREEFWDTAPHYGGTREIWDAL 60

Query: 61  RAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISDLQD 118
           RAA +A+L++AQTIIDSAGVIVQN DLT+CYDERGA+Y+LP YV+SEPTNLI D  D
Sbjct: 61  RAAAEAELSMAQTIIDSAGVIVQNPDLTLCYDERGARYDLPKYVLSEPTNLIRDNND 116
[Close]
BLAST of Spo04573.1 vs. UniProtKB/TrEMBL
Match: A0A0D3CQP9_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 8.400e-44
Identity = 82/107 (76.64%), Postives = 97/107 (90.65%), Query Frame = 1 

		  

Query: 8   DKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDALRAAVDAD 67
           D A+T    KKIRKPKPW+HT+PIT+A+L KMREEFWDTAPHYGGT+EIWDALRAA +AD
Sbjct: 42  DLASTKGPVKKIRKPKPWKHTQPITKAELVKMREEFWDTAPHYGGTKEIWDALRAAAEAD 101

Query: 68  LNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD 115
           ++LAQTI+DSAGVIVQN+DLT CYDERGAKY+LP YV+SEPTNL+ +
Sbjct: 102 ISLAQTIVDSAGVIVQNNDLTTCYDERGAKYDLPKYVLSEPTNLVEE 148
[Close]
BLAST of Spo04573.1 vs. UniProtKB/TrEMBL
Match: W5AIH6_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.900e-43
Identity = 85/114 (74.56%), Postives = 96/114 (84.21%), Query Frame = 1 

		  

Query: 1   MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDAL 60
           MGC  S  K   S  +K +RKPKPW+HT+PIT AQL +MR+EFWDTAPHYGG +EIWDAL
Sbjct: 1   MGCAGSTPKVDES--SKNLRKPKPWKHTQPITPAQLKQMRDEFWDTAPHYGGQKEIWDAL 60

Query: 61  RAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD 115
           RAA DADL LAQTI+DSAG+IV N DLT+CYDERGAKYELPNYV+SEPTNLI D
Sbjct: 61  RAATDADLTLAQTIVDSAGIIVSNPDLTLCYDERGAKYELPNYVLSEPTNLIRD 112
[Close]
BLAST of Spo04573.1 vs. UniProtKB/TrEMBL
Match: A0A068TLQ4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014025001 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.900e-43
Identity = 86/114 (75.44%), Postives = 97/114 (85.09%), Query Frame = 1 

		  

Query: 1   MGCISSRDKATTSDGTKKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDAL 60
           MGC  SR K    +  KKIRKPKPW+H+EPITRAQL +MR+EFWDTAPHYGG +EIWDAL
Sbjct: 1   MGCAGSRAKK--EEPVKKIRKPKPWKHSEPITRAQLVQMRDEFWDTAPHYGGRKEIWDAL 60

Query: 61  RAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD 115
           RAA +ADL LAQ IIDSAG+IVQN DLT+CYDERGAKYELP YV+SEPTNLI +
Sbjct: 61  RAAAEADLTLAQAIIDSAGIIVQNPDLTICYDERGAKYELPRYVLSEPTNLIRE 112
[Close]
BLAST of Spo04573.1 vs. ExPASy Swiss-Prot
Match: UBTD2_DANRE (Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 6.500e-21
Identity = 55/130 (42.31%), Postives = 76/130 (58.46%), Query Frame = 1 

		  

Query: 2   GCISSRDKAT-----TSDGT-------KKIRKPKP-WRHTEPITRAQLNKMREEFWDTAP 61
           GC+ S   ++      SDGT       + +++ KP W+   P+T  QL   R+EFWDTAP
Sbjct: 3   GCVGSHHDSSGSLNENSDGTGVALGRNQPLKREKPKWKSDYPMTDGQLRSKRDEFWDTAP 62

Query: 62  HYGGTREIWDALRAAVDA----DLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYV 115
            + G +EIWDAL+AA  A    D  LAQ IID A + + +  LT CYDE G +Y+LP Y 
Sbjct: 63  AFEGRKEIWDALKAAAQAFESNDHELAQAIIDGASITLPHGALTECYDELGNRYQLPVYC 122
[Close]
BLAST of Spo04573.1 vs. ExPASy Swiss-Prot
Match: UBTD2_MOUSE (Ubiquitin domain-containing protein 2 OS=Mus musculus GN=Ubtd2 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 6.500e-21
Identity = 55/133 (41.35%), Postives = 78/133 (58.65%), Query Frame = 1 

		  

Query: 2   GCISSRDKAT-----TSDGT-------KKIRKPKP-WRHTEPITRAQLNKMREEFWDTAP 61
           GC+ ++  ++      SDGT       + ++K KP W+   P+T  QL   R+EFWDTAP
Sbjct: 3   GCVGAQHDSSGSLNENSDGTGVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAP 62

Query: 62  HYGGTREIWDALRAAVDA----DLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYV 118
            + G +EIWDAL+AA  A    D  LAQ IID A + + +  LT CYDE G +Y+LP Y 
Sbjct: 63  AFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYC 122
[Close]
BLAST of Spo04573.1 vs. ExPASy Swiss-Prot
Match: UBTD1_DANRE (Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 8.400e-21
Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = 1 

		  

Query: 6   SRDKATTSDGTKKIRKPKP-WRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDALRAAV 65
           SR +       + ++K KP W+   P+T  QL   R+EFWDTAP + G +EIWDAL+AA 
Sbjct: 17  SRTQRKRGGRNEPLKKDKPKWKSDYPMTEGQLRSKRDEFWDTAPAFEGRKEIWDALKAAA 76

Query: 66  DA----DLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD 115
            A    D  LAQ I+D A + + +  LT CYDE G +Y+LP Y ++ P NLIS+
Sbjct: 77  VALECSDHELAQAIVDGANITLPHGSLTECYDELGNRYQLPVYCLAPPVNLISE 130
[Close]
BLAST of Spo04573.1 vs. ExPASy Swiss-Prot
Match: UBTD1_XENLA (Ubiquitin domain-containing protein 1 OS=Xenopus laevis GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 8.400e-21
Identity = 55/133 (41.35%), Postives = 77/133 (57.89%), Query Frame = 1 

		  

Query: 2   GCISSRDKAT-----TSDGT-------KKIRKPKP-WRHTEPITRAQLNKMREEFWDTAP 61
           GC+ +   ++      SDGT       + ++K KP W+   P+T  QL   R+EFWDTAP
Sbjct: 3   GCVGTHHDSSGSLNENSDGTGVALGRNQPLKKDKPKWKSDYPMTDGQLRSKRDEFWDTAP 62

Query: 62  HYGGTREIWDALRAAVDA----DLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYV 118
            + G +EIWDAL+AA  A    D  LAQ IID A + + +  LT CYDE G +Y+LP Y 
Sbjct: 63  AFEGRKEIWDALKAAAHAFESNDHELAQAIIDGASITLPHGALTECYDELGNRYQLPVYC 122
[Close]
BLAST of Spo04573.1 vs. ExPASy Swiss-Prot
Match: UBTD2_BOVIN (Ubiquitin domain-containing protein 2 OS=Bos taurus GN=UBTD2 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.900e-20
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 1 

		  

Query: 2   GCISSRDKAT-----TSDGT-------KKIRKPKP-WRHTEPITRAQLNKMREEFWDTAP 61
           GC+ ++  ++      S+GT       + ++K KP W+   P+T  QL   R+EFWDTAP
Sbjct: 3   GCVGAQHDSSGSLNENSEGTGVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAP 62

Query: 62  HYGGTREIWDALRAAVDA----DLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYV 118
            + G +EIWDAL+AA  A    D  LAQ IID A + + +  LT CYDE G +Y+LP Y 
Sbjct: 63  AFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYC 122
[Close]
BLAST of Spo04573.1 vs. TAIR (Arabidopsis)
Match: AT1G53400.1 (Ubiquitin domain-containing protein)

HSP 1 Score: 179.1 bits (453), Expect = 1.800e-45
Identity = 84/112 (75.00%), Postives = 98/112 (87.50%), Query Frame = 1 

		  

Query: 1   MGCISSRDKATTSDGT-KKIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDA 60
           MGC  S    + +DG+ KKIRKPKPW+HT+PIT+A+L K+REEFWDTAPHYGG +EIWDA
Sbjct: 1   MGCAGSTQ--SQADGSVKKIRKPKPWKHTQPITKAELMKLREEFWDTAPHYGGRKEIWDA 60

Query: 61  LRAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNL 112
           LRAA +AD++LAQ I+DSAGVIVQN DLTVCYDERGAKYELP YV+SEPTNL
Sbjct: 61  LRAAAEADISLAQAIVDSAGVIVQNTDLTVCYDERGAKYELPKYVLSEPTNL 110
[Close]
BLAST of Spo04573.1 vs. TAIR (Arabidopsis)
Match: AT5G45740.1 (Ubiquitin domain-containing protein)

HSP 1 Score: 178.7 bits (452), Expect = 2.300e-45
Identity = 86/116 (74.14%), Postives = 96/116 (82.76%), Query Frame = 1 

		  

Query: 1   MGCISSRDKATTSDGTK--KIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWD 60
           MGCI S  +A    G K  KI KPKPW HTEPITRAQL  MREEFWDT+PHYGG REIW+
Sbjct: 1   MGCIGS-SQARNEGGAKRKKIMKPKPWAHTEPITRAQLTNMREEFWDTSPHYGGQREIWE 60

Query: 61  ALRAAVDADLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLISD 115
           ALRAA +ADL LAQTI+DSAGVIVQN DLT+C+DERGA+YELP YV+SEPTNLI +
Sbjct: 61  ALRAAAEADLKLAQTIVDSAGVIVQNRDLTLCWDERGARYELPRYVLSEPTNLIRE 115
[Close]
BLAST of Spo04573.1 vs. TAIR (Arabidopsis)
Match: AT1G16960.1 (Ubiquitin domain-containing protein)

HSP 1 Score: 161.0 bits (406), Expect = 5.100e-40
Identity = 77/114 (67.54%), Postives = 96/114 (84.21%), Query Frame = 1 

		  

Query: 1   MGCISSRDKATTSDGTK-KIRKPKPWRHTEPITRAQLNKMREEFWDTAPHYGGTREIWDA 60
           MGC SSR   T ++G K KIR+PK W+H +PI+R +L +MREEFWDTAPHYGG +EIWDA
Sbjct: 1   MGCSSSR---TIAEGKKEKIRRPKTWKHPQPISRDELTQMREEFWDTAPHYGGKKEIWDA 60

Query: 61  LRAAVDA-DLNLAQTIIDSAGVIVQNHDLTVCYDERGAKYELPNYVMSEPTNLI 113
           LRAA +  DL+LAQTI++SAGVIVQN DLT+CYDE+G+KYELP YV+ +P+NLI
Sbjct: 61  LRAAAEEDDLSLAQTILESAGVIVQNTDLTICYDEKGSKYELPKYVLRDPSNLI 111
The following BLAST results are available for this feature:
BLAST of Spo04573.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902171861|gb|KNA08056.1|2.4e-60100.hypothetical protein SOVF_1661... [more]
gi|731369717|ref|XP_010665504.1|1.8e-4777.7PREDICTED: ubiquitin domain-co... [more]
gi|747076488|ref|XP_011085320.1|6.4e-4578.9PREDICTED: ubiquitin domain-co... [more]
gi|922506833|ref|XP_013590184.1|2.7e-4372.8PREDICTED: ubiquitin domain-co... [more]
gi|661898870|emb|CDO96864.1|2.7e-4375.4unnamed protein product [Coffe... [more]
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BLAST of Spo04573.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QN84_SPIOL1.7e-60100.Uncharacterized protein OS=Spi... [more]
A0A0J8B621_BETVU1.3e-4777.7Uncharacterized protein OS=Bet... [more]
A0A0D3CQP9_BRAOL8.4e-4476.6Uncharacterized protein OS=Bra... [more]
W5AIH6_WHEAT1.9e-4374.5Uncharacterized protein OS=Tri... [more]
A0A068TLQ4_COFCA1.9e-4375.4Uncharacterized protein OS=Cof... [more]
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BLAST of Spo04573.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
UBTD2_DANRE6.5e-2142.3Ubiquitin domain-containing pr... [more]
UBTD2_MOUSE6.5e-2141.3Ubiquitin domain-containing pr... [more]
UBTD1_DANRE8.4e-2144.7Ubiquitin domain-containing pr... [more]
UBTD1_XENLA8.4e-2141.3Ubiquitin domain-containing pr... [more]
UBTD2_BOVIN1.9e-2040.6Ubiquitin domain-containing pr... [more]
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BLAST of Spo04573.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G53400.11.8e-4575.0Ubiquitin domain-containing pr... [more]
AT5G45740.12.3e-4574.1Ubiquitin domain-containing pr... [more]
AT1G16960.15.1e-4067.5Ubiquitin domain-containing pr... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13609UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDcoord: 1..114
score: 3.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0061025 membrane fusion
biological_process GO:0006470 protein dephosphorylation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0043130 ubiquitin binding
RNA-Seq Expression