Spo04590 (gene)

Overview
NameSpo04590
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionFlavone O-methyltransferase 1 (2.1.1.-) (Caffeic acid O-methyltransferase) (TaCOMT1)
LocationSpoScf_00926 : 205264 .. 209646 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTACTTACAAAAATATCTGAGTGAACGACCCAAATGAAGTACGAAGAATGAAACAACCAGTTTACATACAAAGAAAAGGGTTGCAAGAGCTACTTAGTACTCCATGTTTAGACGGATCAGGAAGTTAACTTAGTACATAGTAATTTGAGTTACTTAGTACTCCATGTTTAGACGGATCAGGAAGTTAACTTAGTTATGTTCTTCTAACAAGAGCCTTATAGGCTGGCTTTGCCATGTTGCAGAGGGACTAGTGAGATTCCCCCCCCCCCCCACCCACCCCTTATAGTTTCTTCTGTTAGCATAAAGAAGTTACTTTCTTTTTCAAGCTGGCAGTAGCTTCTTTATGCTGACACAAAAGACAACTATAACCCAATAGTAATCAGTGAGGAGGTTCAGATGCAATGGCAGTTCTGCCACAGCAACTATAACCCAAGCTTGCAGTAGCTTCTTCATTTTTCTCACTTATATATTGCACTGTGAAATTTAAAAGAGTAGATTTACACTTTATCTCCCTCGGGCCTCAACAATGATGTTTTATGTTTGTATCGATATTCAAGTGTTGGTTTGTTTTTAAGGGTGAAAAAGTGATACTTTCTTGTTGTAAGTGTAGGTGTGACTCATGTGGGTGGAGACATGTTCAAATTGATTCCTTCTGGTGATGCAATCTTCATGAAGGTACTTCCTCTTCATTGTTTGTTTAGTATACATCCTTACATATTTGCTGCCGTGATTTATAACCTCTTCTGCCTAACATTTAATTGATCAGTCTAAATGCATATAAAGATACGGTGATGCATCAGACCTAAAGGACGTAAAATTTAATGGAAAGAACTAAAAATGAACGTAACTAAGAGAAATGGAGCTTCAGTTAGTTAGAAGTTAGTTAGAAAAGTTTGCCTATAATTTACAGCCAGCTCTTATGTATATTTCCTGGTGAAATGCAGGCAGCTCTTGTTGTTTAGTTATGTTTTAAATCTGACTTAATTTTTTGTTTTGACAACGTAACAAACAACAAAAGGGCTAAAGTATTGCGGTTGTAGCTAGGCTATGGGGCTGAATTAATAAAGAACGACGCACTTTCCTACACAAAATATAATCAAAATTAAGAGTAACAGATCGTATTTCCTCTATTATTATGTGTATCTTCTAGGGTGCTTGTGTTGGATCATAAACGGAAGTGATGATATTGATGCAGTCTGTGATGATTTCTATATGCTTGCAAATAACTCAAAATGGACCTAGTTAACCCAAAAGAACCTTCAAAAGACTCTTTATTTATGTTTACAACTACAATAATAAATAATAATATATCTAACTTAATTTAGATAATCGACTGAAATTGACTGATCAAATATCGTTATATGGTAAGAAGAAGGCGTCTATAAGAAGAGTACCTGGTTTTCAGGTGGTTATCTAGAATTTAGTATCTTTTGCCTTTTTCTGTTCAACTCCTATGTTATCTACCTAGTGTTTCGTAATGTTGATTTTGATTTGTGTATAATTGACCCAGTTTTCCCCTGGTGACCCAAGCAAGTTCATGGTTACTATTGCTGATTCCCAGGTCCGGATACTGGGGTTAATGTAATATGTAAATATAAAGGTTGGTTACTCATCTCTGAGTTAATTCTGTTTGAGGCTTCTTCTGAGTCATCTTCACTTAATCAGTATTGAAAGTATAATAGTTGTTTGGTTGCATGTTACAAATCACATTTCCAGGAAGTTTTGCAAATTCAAATTCACGAAAGTTGTTGAACATTATGCAGTTTTATTTGTACAAAGTTGCTCAGTGAATTTTATTTCTGTCCTAATTTCTGTTATGTTATTTTCTGTTATCAGGTCTTCGAAATGCAAGAAGTCAGATCTCTGCATCATTTACATCATATGGGAAACACATTATCTCAGCCAGTGAAGACTCTTCTGTTTATGTGTTGGAATCCAATAAATCAGACACATGTCATACAACAATTTCATCTCACTTCAGAAGCAAGAACTCATTGGGTGCGCTATGTTGTTCAACAAATGTATCGTAGATAGATTGCATTGAAGGAATCAAAAATATACTCCGTACAACTCTATTAATTAATGTGTTTTGCATAGTTTAATGTTGTGGTCTGATTTTAGAACATATTTATGTAATCAGTTATATTATAATGACAATTGCAAAAAAAAAAAAATTATTGGAGGTTTGAAATTAATGTTTAACCACTATATTATTCACATGGTTTTATTATGAACCTGGTATAGTTTTGCGGTATCATAAAATGAAATATAAGGCATAACCAAAAAAAATATTTTTAAAAATGATAAAAATCACTTTAACAGCGCTTCTAGGATATCCGCTATTACAAAATAATTTAAAAGTTGGCGGTTAAAGTTTTGACAGCATACCTTTAATAGCGCTTCTAATGTGCTGTAAAATAATAATTTGAATTATCCTAAAGGGACCTTTGACAGCGCTTCTAGCAAGCGCTGTTAAATGTGCCTTTTTCTTTTAACAGCGGAGCGATTAACAGCGCTCTTAGAAGCGCTGTTAAATGCAAAAACAAGCGCTGTTAAATGGTATTTCTGTAGTAGTGAATAACATATTTGTTTGTGGGTTTAGTCAAGGAGGTGCCTGCTTACTTATCTCTTCCTTCCTCCGCACAATTGAAATTTGTACCCAAAATTTGACTGTAACTGTTTGGGGAACTTACTCAGTGGGATCAAATTTTGTAGGTTCTTTGCCTTAGCTAGTGTACTCCTTTATCCGAAAACTTTAGGTGGTGGTGCATTTTTCACTTTTCAGTGGTTGGATTCCATTTAAGCATTCCATAATTGAACAATTTCCAGCAGATTCTAAGAAAGTACACTTTATTTCTGCATTTCTAGTATTTGCAGTTCTATAAATTGGCTAGACACTTAGAGTTTATTTTAAGTTAATTTCTTCTTGACCTGCATTATAACGCCCATCCTCTGTTTTCCCACTCTTGCATCTTATTGTTGCTAGAAAAGCTTTGGGCTGATTCTTAGGAGCTAAGTCATTGACGTATCAATAGCCTTTAGTGGATGAACTTGAATCAAAGATAAGAGAATTTAAGGATGTCTTTTGAATGTTCAAGTTCAGGTAATTAACTAGGAAATCACTTCATCGTTCTCCAACTGTATCTTCACAACAGGAATTACAGGATAAATATTGCAGGTTCCTGGTTCACTTTCTGAAAATGTTTACTGTGTGAATTGTTGCAAAAACTTGGGGGATAATAGCAAGCCTGAGTCCAATTCGCCTCCAGAGTTTATATGAATATCATAGATGTAACTTCTTCTTATCCTTTTTTCTTTGTTAAGAGACACAATTGAGATGTTAGCTTGTTGATATGTGCTGTATTGGATATGTTGTTATTGAAAAACTGAAAGTATATGGTCTTTCACTTCAGCAACCTAATAGATTTTCGCAAAACATAACGTCTATTTTGCACATTTCAGTAGTCGCAGTCTTAACTAATTACTATGTTCTAATTGTCCATTATACATTATGTCATTTGGTTTATACAAGGTTCTCTTTAATTTTGGGGTCATTTGGTTTTAAGATTTGAAAGTATTACAGGATAAATCGGTGATCACATGCATATTGAACAATGCTATAACTGAGCGTATCATAGTTGAGGAAACTGTATTAGTGGTGTAGATGGAGCTGTCCTTTAATTATGCATGTATTTATATAAATTCTTTTATTACAAGTTTACAACACAAACCTGCCAGATGGTCTGACGAATTTTTTTTGATACGGGTAGATAAGTGGTGATAATTTTTCTTTACACTCCACGTTGATTTTAGTGATCTGCTGTATCTGTTCAGTTTCAAGAGTCTTCAAATGACTGATATATGCCACGCAAGTGATTAACCGTGTTTCAAGAGTCTACAACTAATAATACTTGGAACAATTGTTCTCATGTTTAGGAGTTATCGGACTTGGCAATCCAACAACAAAGGATCTCGAAAGTCTCTAAGATGGAAAGAAATTATAGTAAGATTTAATTAGTTTGATTATTATTTTTATCGTAATTTATTCATATATATGTTATTCTTTAATTTAATGTGTATTATATTTGTATCTTAGTGTTCTCGCGAACCGGAAATGCTTGAATGTGGCTATTACGTCATGAAGTACATGTATCAAATAGTTTTACTTTGATTACAAAGTATTAGTAATGTGGAAGAGGTACGTGTACATGTATTTTTGTTATTATTTTATCGATGTCTCAGTTGTTAATATATATGCGCTAGCTTTTATATATCTAAACTTTACTAATTAATACATTATTTTGTGGAAGTACAGATATTTTCTCCAAACCCGTACACTCAAGAGGAGATCGATGATGTTCGAGAAAAAATGGAGTAG

mRNA sequence

ATGTCCTACTTACAAAAATATCTGAGTGTGACTCATGTGGGTGGAGACATGTTCAAATTGATTCCTTCTGGTGATGCAATCTTCATGAAGTTTTCCCCTGGTGACCCAAGCAAGTTCATGGTTACTATTGCTGATTCCCAGGTCTTCGAAATGCAAGAAGTCAGATCTCTGCATCATTTACATCATATGGGAAACACATTATCTCAGCCAGTGAAGACTCTTCTGAGTTATCGGACTTGGCAATCCAACAACAAAGGATCTCGAAAGTCTCTAAGATGGAAAGAAATTATAATATTTTCTCCAAACCCGTACACTCAAGAGGAGATCGATGATGTTCGAGAAAAAATGGAGTAG

Coding sequence (CDS)

ATGTCCTACTTACAAAAATATCTGAGTGTGACTCATGTGGGTGGAGACATGTTCAAATTGATTCCTTCTGGTGATGCAATCTTCATGAAGTTTTCCCCTGGTGACCCAAGCAAGTTCATGGTTACTATTGCTGATTCCCAGGTCTTCGAAATGCAAGAAGTCAGATCTCTGCATCATTTACATCATATGGGAAACACATTATCTCAGCCAGTGAAGACTCTTCTGAGTTATCGGACTTGGCAATCCAACAACAAAGGATCTCGAAAGTCTCTAAGATGGAAAGAAATTATAATATTTTCTCCAAACCCGTACACTCAAGAGGAGATCGATGATGTTCGAGAAAAAATGGAGTAG

Protein sequence

MSYLQKYLSVTHVGGDMFKLIPSGDAIFMKFSPGDPSKFMVTIADSQVFEMQEVRSLHHLHHMGNTLSQPVKTLLSYRTWQSNNKGSRKSLRWKEIIIFSPNPYTQEEIDDVREKME
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04590.1Spo04590.1mRNA


Homology
[Close]
BLAST of Spo04590.1 vs. NCBI nr
Match: gi|902172613|gb|KNA08151.1| (hypothetical protein SOVF_164990 [Spinacia oleracea])

HSP 1 Score: 67.8 bits (164), Expect = 1.500e-8
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 1 

		  

Query: 17 MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQV 49
          MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQV
Sbjct: 1  MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQV 32
[Close]
BLAST of Spo04590.1 vs. NCBI nr
Match: gi|902228689|gb|KNA21218.1| (hypothetical protein SOVF_045340 isoform B [Spinacia oleracea])

HSP 1 Score: 67.8 bits (164), Expect = 1.500e-8
Identity = 38/75 (50.67%), Postives = 41/75 (54.67%), Query Frame = 1 

		  

Query: 75  LSYRTWQSNNKGSRKSLRWKEII----------------------------------IFS 116
           +SYRTWQ+NNKGSRKSLRWKEII                                  IFS
Sbjct: 86  MSYRTWQANNKGSRKSLRWKEIICSREPEMSECGYYVMKYMYQIVLLGLQSISNVEEIFS 145
[Close]
BLAST of Spo04590.1 vs. NCBI nr
Match: gi|902228688|gb|KNA21217.1| (hypothetical protein SOVF_045340 isoform A [Spinacia oleracea])

HSP 1 Score: 66.2 bits (160), Expect = 4.200e-8
Identity = 38/79 (48.10%), Postives = 41/79 (51.90%), Query Frame = 1 

		  

Query: 75  LSYRTWQSNNKGSRKSLRWKEII------------------------------------- 116
           +SYRTWQ+NNKGSRKSLRWKEII                                     
Sbjct: 86  MSYRTWQANNKGSRKSLRWKEIICSREPEMSECGYYVMKYMYQIVLLGLQSISNVEEVRV 145
[Close]
BLAST of Spo04590.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNL1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_164990 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.000e-8
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 1 

		  

Query: 17 MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQV 49
          MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQV
Sbjct: 1  MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQV 32
[Close]
BLAST of Spo04590.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RP18_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_045340 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.000e-8
Identity = 38/75 (50.67%), Postives = 41/75 (54.67%), Query Frame = 1 

		  

Query: 75  LSYRTWQSNNKGSRKSLRWKEII----------------------------------IFS 116
           +SYRTWQ+NNKGSRKSLRWKEII                                  IFS
Sbjct: 86  MSYRTWQANNKGSRKSLRWKEIICSREPEMSECGYYVMKYMYQIVLLGLQSISNVEEIFS 145
[Close]
BLAST of Spo04590.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQW3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_045340 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.900e-8
Identity = 38/79 (48.10%), Postives = 41/79 (51.90%), Query Frame = 1 

		  

Query: 75  LSYRTWQSNNKGSRKSLRWKEII------------------------------------- 116
           +SYRTWQ+NNKGSRKSLRWKEII                                     
Sbjct: 86  MSYRTWQANNKGSRKSLRWKEIICSREPEMSECGYYVMKYMYQIVLLGLQSISNVEEVRV 145
The following BLAST results are available for this feature:
BLAST of Spo04590.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 3
Match NameE-valueIdentityDescription
gi|902172613|gb|KNA08151.1|1.5e-8100.hypothetical protein SOVF_1649... [more]
gi|902228689|gb|KNA21218.1|1.5e-850.6hypothetical protein SOVF_0453... [more]
gi|902228688|gb|KNA21217.1|4.2e-848.1hypothetical protein SOVF_0453... [more]
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BLAST of Spo04590.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0K9QNL1_SPIOL1.0e-8100.Uncharacterized protein OS=Spi... [more]
A0A0K9RP18_SPIOL1.0e-850.6Uncharacterized protein OS=Spi... [more]
A0A0K9RQW3_SPIOL2.9e-848.1Uncharacterized protein OS=Spi... [more]
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BLAST of Spo04590.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04590.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008171 O-methyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo140250.95Barchart | Table
Spo179420.95Barchart | Table
Spo257130.93Barchart | Table
Spo042410.65Barchart | Table
Spo188230.65Barchart | Table