Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGGTGCCCTGTACCGCTGTACGTGTTAATTCTAACACGGAGTACCCAAAAAAAGGAACCGAGCCATATAAAAATATTTCATGCCCAACATTATAAAACAATCCAAGCAAATTTTTGTAAAATATAAATACAGAATTACAACTTAAGCCCAAACTATAAAACAATCAAAGCCCAAACCATAAAGTAGATAATTTTTCAATAAAATATCAATTATTTATTAAAAAATTTAAAATAACAGGGTACCCTGAATCGGAATTTGTTGCAACAAGTTCCTTTTCTGGAATTTTAACAGGGTATCCTGTTGTGCATATGATGTCCTGTTTTGAAGGTTTTCACAGTATTAAAATATTGAGTAATCAATTTAGTTGGTACAAAAATGATAAAAGTCGCAACATGTGACCTTTAAGTCGTGTCACAACGATGACATGACATGCTTAAGTTGGTAATTTATATACAAATTATCATGATGTTTTAAGACTATAAAGTTGGAGACCGTTCTTAACATGTTTGATCATGGTCTTTCCAGGGATAGGTGCTGCTTGGAAGACTGCGAATGTCGAACCTGGATCCTCAGTTGCTATATTTGGCATGGGAGCTATTGGATTGGCGGTAAGACAACCATACATATCATGTTATTCATGTTATGCTATATACTGATACATCCCTTAGTGTTATGCTATTATGATCATTGAAATTGTACTTGGTTGTGTTCTGTTACTGATTGATGATCAACATATAATATTGAGGTTTATTACGACTTTTATTGGACCTCAAAGGTTGCAGAGGGAGCTAGGCTTTGTGGAGCAACTAAAATAATAGCAGTAGATGTAAACCCGGATAAATTTGAAATTGGTAATACATACTGATACACTACAATTTCAATCTCACACATCGATCTGTAATTCTGTATATAATATGATTTTGATTGATCCTCCTTTTTCATCTTCTGTTTCAGGTAAAAAGTTTGGAGTCACCGACTTTATCAACCCTAAAAGTTGTGAGGATAAATCTGTGAGCCAGGTGATTAGTTCAATTCAAAACTTGTTAATTAACTTTGATGCATTACACTTTATTGGAGTACTTAGCATTTCACCTACCTTTATGGCTTGTTAATTGCTAGTTAGGTCTATTTAGTTAAGCCTCCCTTTTCGTCTGTTGAGCAGATTATATGCGAGATGACAGACGGAGGTGCAGATTATTGTTTCGAATGTGTAGGCATGTCGACTTTGGTAGAGGAAGCTTATGCTTCTTGCCGAAAGGTCTCTTGTTATCTTTCATCTCTTCTTTCTGTCAATTTCAAGTTCAACTACATTTGTAATGTATATAATGTTATATATGTTTCACAGGGTTGGGGTAAAACGGTTGTGCTAGGAGTGGACAAGCCAGGTTCACAACTGAGCCTCACTTCTGCTAATGTATTGTGTAGCGGCAAAACTCTAACAGGGGCATTGTTTGGAGGTCTAAAGGCGAAATCTGATATTCCTATCCTTGTAAAACGTTATTTGGACAAGGTAATTAATATATGGAGTACTTCATATTAAATACTCCCTTTGTTCCTTAATACTCGCACCGTTTTGACTTTTTGCACTATTCATATAATTCACTTTGACCTTATTTTATTTCTAGTATATGAAAACAAATAGTAGTATATAATATATTGTTATCTTCATCTTAATATATATTTCAAAATATTAATATATTTATAAGTTTTTATAATTTGTAGTTAAAGATATTGGTGGTCAAAGTTGTGCATTGGCAAACGTGTCCAGTCAAAACGGTGCGAGTATTAAAGGACGGAGGGAGTAACTAGTTTAGGGCCCGTGTAACGCACAGCTACTACAAAAACAATTTATTATTTTAATAGTAATTAAAAGACTTGTGATATTATGAAAACATTAAAGTAAAAAGATATATGAAAAAATATAAATTCAAAGTTGTGTAAAAAAATATTCAAATGAACTAAATTTGCATATTACTATACAAAGTTAAAAATTATAGGCGTTTATTTGTATGTAGAACGATCTAACAACGTTAACCAAACCCGAATGACTCAAGACTAATTTTCGAAAAGACCCGAGCATAACCGAGTTAGTCAAATACAACATATTTTGAATTGAGTAAAATCTTGATAAATAAACTTATATGTTATTCTACTTACCATGTATTATTATTTTAATTAACATTTTTACTTACCAGTTACCATGCATGTATTATATTATTAATAGTAGACTAACATTAGAAGTTCATTTATCAATATTTTTATATTTTTTATCAGATGAAAAAGTTATAATAATACATAAATAAGATTATATCATAAAGGAAAAAATAATATTGATTTAGCTTTCCTCCAATAATATATTATGCAGTACACATCTATGGTAATTAAAATATATTTTTATCTTAGTTTCCTAAAAAAAACGTAATGTAATTTATTTATTTTAAAGTAAAAAATTAAAAAAATATTTTGACGGGAAAAAATCGCACCAGAAAATGACACGTGTGATTCCTGGTGTCTCTTTTACTATATAGTAATAGATAGATAGATAGATAGATAGATTGCAGATATACTCCCATCTGTTCATTTTTGTATAGAGGTAGTCTGAAAACTAAATCTAAATTGCGCTACGTTATTATTATTATTTTTGCAGGAAGTTCGACTAGATTATTTCGTATCACATGAGATGAAGTTTGATGAGATTAATAAAGCGTTTAATTTGCTTATAGAAGGGAAATGCCTTCGATGCGTGCTATGGATGGATTAA ATGTTGGGTGCCCTGTACCGCTGGATAGGTGCTGCTTGGAAGACTGCGAATGTCGAACCTGGATCCTCAGTTGCTATATTTGGCATGGGAGCTATTGGATTGGCGGTTGCAGAGGGAGCTAGGCTTTGTGGAGCAACTAAAATAATAGCAGTAGATGTAAACCCGGATAAATTTGAAATTGGTAAAAAGTTTGGAGTCACCGACTTTATCAACCCTAAAAGTTGTGAGGATAAATCTGTGAGCCAGATTATATGCGAGATGACAGACGGAGGTGCAGATTATTGTTTCGAATGTGTAGGCATGTCGACTTTGGTAGAGGAAGCTTATGCTTCTTGCCGAAAGGGTTGGGGTAAAACGGTTGTGCTAGGAGTGGACAAGCCAGGTTCACAACTGAGCCTCACTTCTGCTAATGTATTGTGTAGCGGCAAAACTCTAACAGGGGCATTGTTTGGAGGTCTAAAGGCGAAATCTGATATTCCTATCCTTGTAAAACGTTATTTGGACAAGGAAGTTCGACTAGATTATTTCGTATCACATGAGATGAAGTTTGATGAGATTAATAAAGCGTTTAATTTGCTTATAGAAGGGAAATGCCTTCGATGCGTGCTATGGATGGATTAA ATGTTGGGTGCCCTGTACCGCTGGATAGGTGCTGCTTGGAAGACTGCGAATGTCGAACCTGGATCCTCAGTTGCTATATTTGGCATGGGAGCTATTGGATTGGCGGTTGCAGAGGGAGCTAGGCTTTGTGGAGCAACTAAAATAATAGCAGTAGATGTAAACCCGGATAAATTTGAAATTGGTAAAAAGTTTGGAGTCACCGACTTTATCAACCCTAAAAGTTGTGAGGATAAATCTGTGAGCCAGATTATATGCGAGATGACAGACGGAGGTGCAGATTATTGTTTCGAATGTGTAGGCATGTCGACTTTGGTAGAGGAAGCTTATGCTTCTTGCCGAAAGGGTTGGGGTAAAACGGTTGTGCTAGGAGTGGACAAGCCAGGTTCACAACTGAGCCTCACTTCTGCTAATGTATTGTGTAGCGGCAAAACTCTAACAGGGGCATTGTTTGGAGGTCTAAAGGCGAAATCTGATATTCCTATCCTTGTAAAACGTTATTTGGACAAGGAAGTTCGACTAGATTATTTCGTATCACATGAGATGAAGTTTGATGAGATTAATAAAGCGTTTAATTTGCTTATAGAAGGGAAATGCCTTCGATGCGTGCTATGGATGGATTAA MLGALYRWIGAAWKTANVEPGSSVAIFGMGAIGLAVAEGARLCGATKIIAVDVNPDKFEIGKKFGVTDFINPKSCEDKSVSQIICEMTDGGADYCFECVGMSTLVEEAYASCRKGWGKTVVLGVDKPGSQLSLTSANVLCSGKTLTGALFGGLKAKSDIPILVKRYLDKEVRLDYFVSHEMKFDEINKAFNLLIEGKCLRCVLWMD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo04610.1 vs. NCBI nr
Match: gi|902196040|gb|KNA13020.1| (hypothetical protein SOVF_120580 isoform B [Spinacia oleracea]) HSP 1 Score: 400.2 bits (1027), Expect = 2.200e-108 Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 1
BLAST of Spo04610.1 vs. NCBI nr
Match: gi|902196039|gb|KNA13019.1| (hypothetical protein SOVF_120580 isoform A [Spinacia oleracea]) HSP 1 Score: 400.2 bits (1027), Expect = 2.200e-108 Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 1
BLAST of Spo04610.1 vs. NCBI nr
Match: gi|731372754|ref|XP_010666439.1| (PREDICTED: alcohol dehydrogenase-like 7 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 349.7 bits (896), Expect = 3.400e-93 Identity = 165/198 (83.33%), Postives = 184/198 (92.93%), Query Frame = 1
BLAST of Spo04610.1 vs. NCBI nr
Match: gi|698531467|ref|XP_009762562.1| (PREDICTED: alcohol dehydrogenase-like 7 [Nicotiana sylvestris]) HSP 1 Score: 329.3 bits (843), Expect = 4.700e-87 Identity = 155/198 (78.28%), Postives = 179/198 (90.40%), Query Frame = 1
BLAST of Spo04610.1 vs. NCBI nr
Match: gi|697103549|ref|XP_009605587.1| (PREDICTED: alcohol dehydrogenase-like 7 [Nicotiana tomentosiformis]) HSP 1 Score: 323.2 bits (827), Expect = 3.400e-85 Identity = 152/198 (76.77%), Postives = 178/198 (89.90%), Query Frame = 1
BLAST of Spo04610.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0H6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_120580 PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 1.500e-108 Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 1
BLAST of Spo04610.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R255_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_120580 PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 1.500e-108 Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 1
BLAST of Spo04610.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B552_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_002030 PE=3 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 2.300e-93 Identity = 165/198 (83.33%), Postives = 184/198 (92.93%), Query Frame = 1
BLAST of Spo04610.1 vs. UniProtKB/TrEMBL
Match: A0A067GZ69_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016507mg PE=3 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 3.100e-85 Identity = 152/197 (77.16%), Postives = 180/197 (91.37%), Query Frame = 1
BLAST of Spo04610.1 vs. UniProtKB/TrEMBL
Match: A0A067H284_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016507mg PE=3 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 3.100e-85 Identity = 152/197 (77.16%), Postives = 180/197 (91.37%), Query Frame = 1
BLAST of Spo04610.1 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 1.100e-80 Identity = 139/197 (70.56%), Postives = 169/197 (85.79%), Query Frame = 1
BLAST of Spo04610.1 vs. ExPASy Swiss-Prot
Match: ADHL1_ARATH (Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 9.900e-69 Identity = 126/198 (63.64%), Postives = 158/198 (79.80%), Query Frame = 1
BLAST of Spo04610.1 vs. ExPASy Swiss-Prot
Match: ADHL5_ARATH (Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 1.400e-67 Identity = 125/198 (63.13%), Postives = 159/198 (80.30%), Query Frame = 1
BLAST of Spo04610.1 vs. ExPASy Swiss-Prot
Match: ADHL2_ARATH (Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 9.200e-67 Identity = 120/198 (60.61%), Postives = 159/198 (80.30%), Query Frame = 1
BLAST of Spo04610.1 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 4.800e-55 Identity = 100/198 (50.51%), Postives = 141/198 (71.21%), Query Frame = 1
BLAST of Spo04610.1 vs. TAIR (Arabidopsis)
Match: AT5G42250.1 (Zinc-binding alcohol dehydrogenase family protein) HSP 1 Score: 300.8 bits (769), Expect = 6.300e-82 Identity = 139/197 (70.56%), Postives = 169/197 (85.79%), Query Frame = 1
BLAST of Spo04610.1 vs. TAIR (Arabidopsis)
Match: AT1G22430.1 (GroES-like zinc-binding dehydrogenase family protein) HSP 1 Score: 261.2 bits (666), Expect = 5.600e-70 Identity = 126/198 (63.64%), Postives = 158/198 (79.80%), Query Frame = 1
BLAST of Spo04610.1 vs. TAIR (Arabidopsis)
Match: AT4G22110.1 (GroES-like zinc-binding dehydrogenase family protein) HSP 1 Score: 257.3 bits (656), Expect = 8.000e-69 Identity = 125/198 (63.13%), Postives = 159/198 (80.30%), Query Frame = 1
BLAST of Spo04610.1 vs. TAIR (Arabidopsis)
Match: AT1G22440.1 (Zinc-binding alcohol dehydrogenase family protein) HSP 1 Score: 254.6 bits (649), Expect = 5.200e-68 Identity = 120/198 (60.61%), Postives = 159/198 (80.30%), Query Frame = 1
BLAST of Spo04610.1 vs. TAIR (Arabidopsis)
Match: AT5G43940.2 (GroES-like zinc-binding dehydrogenase family protein) HSP 1 Score: 213.8 bits (543), Expect = 1.000e-55 Identity = 96/195 (49.23%), Postives = 141/195 (72.31%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo04610.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo04610.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo04610.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo04610.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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