Spo04654 (gene) | SpinachBase

Overview


Name	Spo04654
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	chr4 : 24870286 .. 24871955 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGTACTTAAGGGGGAATATGGTGAAACCAATGCAAGACTGATTGTGGATGGAGCATGGAAGAAAGCTAAAAAGAAGAAGTATAGCATAGCTGCGGTAGGATGGGTAATAGAAGCAGAGGGTAGAAGAATTAATTCGGAGGGCCATAGGCTGAATGCTATAAATACAGGCCAAGCTGAGATGAAAGCCATTCTAATTAGCAAGAAGGTGGTTGAGTCTCATACCCAATCTATTACTATTCTTACAGACTCCTCCAACAACATTATGGCCTTAAGAGAATACCCTTGTTGTAGAATAGAACTTGCAACTATTTGTAATGAAATTAGATACTTAGCTGATAGATTAGAGACTTGTATAATTATTAAATGTCATAAGGATAGAGTTAAGAGTGCTCATGATTTAGCTTGTCATGCTAGGAGACATTGGGTAATATTTCTGCGGCAACATTTGTGTAAGACCGCCTTACCGAAAAGATCGCTTTAATTGCTTAACTAATTGTTTCCATTGCTTAATTAATTGGTTCTGTTGCTTAACTAATTAGTTTCAGCGCTTAACTAATTAGTTTCTTTGCTTAACTAATTGGTTTCAGTGTTTAACTAATTAGTTCCAATGCTTAACTAATTAGTTCCGGTGTTCAACTAATTAGTTTCATTGCTTAACTTATATGATACCAAGGTGGCCTTTTGTGTAAGACCGTCTTATATAAAAATTTGTGATATTTCTCAATGTTTTTCCTGTTTGTAATTTCTGCCAAAAAAAAGAAAAAAAAAGAGTTGCCTTTTCAGCTTCCACAAAAAAAGAAAAAAAAAGAAAAAAAAAGGCGTGCCATTCTATTTGCCCATCCCGTGCTGTTTCTACGCTCTGCATTCCTTGCCTCCTCCTTTAATGGCTGCTCTCTTCTTCCCATTTTCCATTACTTCTGCTCACTTAACACCTTTTTCCTAAATGTTTCCTTTTTTCTCTCTCCTACAACCTTCAATGCTCTTCAAATTATGATTACACTCAATTCTGGAAAAATAACATTAAAAGGTAAGAATTTCTCTAATTTATGCTGTATATATTTACACATTAACTTCAATTTTCATCTTATTTTCTGAAATTCTCTATTTCTGCAAATTTTTAAGTTCTAAATTCGAGCTGCATAATCTTTCACTTTGTTTCAATGGTTAGATTAAAGCTGTTATTGTTACAAGTGTAAATTTGATGATCTATTTTTTGAATTTTGAGAAGATTGGACTGGGTTTAGCCTTTTCTTGAAAATATGTGAACTTAGAATTCATTTTATTATAAAAATTTGTAGTTTTCCTGGGTTTAGGTTTACTATTCCATTGTCATAATTGTTTAGCTTATGCAGTACTAGACAAATGGGTTCAATTTTGAAAATGGGTTTTTTATTCTGTTGAATTTGATTGTAAATATCTATGTATTCTGCCCGAAATTCTAGGGATTTTGTCAGGTTTTATTTTCAAAACTATTTATTCTGTTTTTAAATTTCCTGTATCCTCAAATCTTTGTTATTTATGGTTTACATGATTTTCCTTCCTAATTGGTGTGTTTATTGCTTAAAAATAGTTAGAATATCGAAAATAATACAATGAAGATGTAATTGTGGCGAGGGCTACTAGTGATATAATTGCCTAATTTTGTTGTATAAGACAGGAGATTAA

mRNA sequence

ATGTTGGTACTTAAGGGGGAATATGGTGAAACCAATGCAAGACTGATTGTGGATGGAGCATGGAAGAAAGCTAAAAAGAAGAAGTATAGCATAGCTGCGGTAGGATGGGTAATAGAAGCAGAGGGTAGAAGAATTAATTCGGAGGGCCATAGGCTGAATGCTATAAATACAGGCCAAGCTGAGATGAAAGCCATTCTAATTAGCAAGAAGGTGGTTGAGTCTCATACCCAATCTATTACTATTCTTACAGACTCCTCCAACAACATTATGGCCTTAAGAGAATACCCTTGTTGTAGAATAGAACTTGCAACTATTTGTAATGAAATTAGATACTTAGCTGATAGATTAGAGACTTGTATAATTATTAAATGTCATAAGGATAGAGTTAAGAGTGCTCATGATTTAGCTTGTCATGCTAGGAGACATTGGCTTCCACAAAAAAAGAAAAAAAAAGAAAAAAAAAGGCGTGCCATTCTATTTGCCCATCCCGTGCTGTTTCTACGCTCTGCATTCCTTGCCTCCTCCTTTAATGGCTGCTCTCTTCTTCCCATTTTCCATTACTTCTGCTCACTTAACACCTTTTTCCTAAATGTTTCCTTTTTTCTCTCTCCTACAACCTTCAATGCTCTTCAAATTATGATTACACTCAATTCTGGAAAAATAACATTAAAAGGAGATTAA

Coding sequence (CDS)

ATGTTGGTACTTAAGGGGGAATATGGTGAAACCAATGCAAGACTGATTGTGGATGGAGCATGGAAGAAAGCTAAAAAGAAGAAGTATAGCATAGCTGCGGTAGGATGGGTAATAGAAGCAGAGGGTAGAAGAATTAATTCGGAGGGCCATAGGCTGAATGCTATAAATACAGGCCAAGCTGAGATGAAAGCCATTCTAATTAGCAAGAAGGTGGTTGAGTCTCATACCCAATCTATTACTATTCTTACAGACTCCTCCAACAACATTATGGCCTTAAGAGAATACCCTTGTTGTAGAATAGAACTTGCAACTATTTGTAATGAAATTAGATACTTAGCTGATAGATTAGAGACTTGTATAATTATTAAATGTCATAAGGATAGAGTTAAGAGTGCTCATGATTTAGCTTGTCATGCTAGGAGACATTGGCTTCCACAAAAAAAGAAAAAAAAAGAAAAAAAAAGGCGTGCCATTCTATTTGCCCATCCCGTGCTGTTTCTACGCTCTGCATTCCTTGCCTCCTCCTTTAATGGCTGCTCTCTTCTTCCCATTTTCCATTACTTCTGCTCACTTAACACCTTTTTCCTAAATGTTTCCTTTTTTCTCTCTCCTACAACCTTCAATGCTCTTCAAATTATGATTACACTCAATTCTGGAAAAATAACATTAAAAGGAGATTAA

Protein sequence

MLVLKGEYGETNARLIVDGAWKKAKKKKYSIAAVGWVIEAEGRRINSEGHRLNAINTGQAEMKAILISKKVVESHTQSITILTDSSNNIMALREYPCCRIELATICNEIRYLADRLETCIIIKCHKDRVKSAHDLACHARRHWLPQKKKKKEKKRRAILFAHPVLFLRSAFLASSFNGCSLLPIFHYFCSLNTFFLNVSFFLSPTTFNALQIMITLNSGKITLKGD

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04654.1	Spo04654.1	mRNA

Homology

[Close]

BLAST of Spo04654.1 vs. NCBI nr
Match: gi|902128353|gb|KNA04183.1| (hypothetical protein SOVF_202050, partial [Spinacia oleracea])

HSP 1 Score: 120.9 bits (302), Expect = 2.800e-24
Identity = 59/134 (44.03%), Postives = 89/134 (66.42%), Query Frame = 1


		  
Query: 4   LKGEYGETNARLIVDGAWKKAKKKKYSIAAVGWVIEAEGRRINSEGHRLNAINTGQAEMK 63
           +KG Y   +A ++VDGAWKK +KK Y+++AVGW I  +GR I S G R+ A++  Q E K
Sbjct: 177 IKGAYNSNDAIVMVDGAWKKVRKKSYAMSAVGWNICIQGRDIESGGMRVQALSAEQTEAK 236

Query: 64  AILIS-KKVVESHTQSITILTDSSNNIMALREYPCCRIELATICNEIRYLADRLETCIII 123
            +L   +K +  +  SI ILT  SN + AL+++P C++EL +IC+EI +LA+    C I+
Sbjct: 237 VVLQGVRKAIAINLPSILILTYCSNVVKALQDFPSCKLELTSICSEIIWLANAFVNCTIV 296

Query: 124 KCHKDRVKSAHDLA 137
           KC +D ++ AH LA
Sbjct: 297 KCSRDNIRKAHTLA 310

[Close]

BLAST of Spo04654.1 vs. NCBI nr
Match: gi|902240280|gb|KNA25954.1| (hypothetical protein SOVF_001980 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 94.7 bits (234), Expect = 2.100e-16
Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 1


		  
Query: 4   LKGEYGETNARLIVDGAWKKAKKKKYSIAAVGWVIEAEGRRINSEGHRLNAINTGQAEMK 63
           + G  G  N  + VDGAWK  K+     AA+GW IE  G  +   G ++   N  Q E  
Sbjct: 14  ITGVVGAYNTVITVDGAWKMNKEVARVDAAIGWTIEVNGELLWEGGDKVLTHNALQTEAL 73

Query: 64  AILISKKVVESHTQSITIL-TDSSNNIMALREYPCCRIELATICNEIRYLADRLETCIII 123
           AIL   K  ++ T S  IL TD SN + +++ YP C++E+AT+C +I  +A  ++  ++I
Sbjct: 74  AILTGLKEAKNRTLSSVILRTDCSNIVASIKSYPNCKMEVATLCFDIISIASTMDNVVLI 133

Query: 124 KCHKDRVKSAHDLACHAR 141
           KC ++ V+ AHDLA  AR
Sbjct: 134 KCDRNDVRRAHDLAKKAR 151

[Close]

BLAST of Spo04654.1 vs. NCBI nr
Match: gi|902240279|gb|KNA25953.1| (hypothetical protein SOVF_001980 isoform A [Spinacia oleracea])

HSP 1 Score: 94.7 bits (234), Expect = 2.100e-16
Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 1


		  
Query: 4   LKGEYGETNARLIVDGAWKKAKKKKYSIAAVGWVIEAEGRRINSEGHRLNAINTGQAEMK 63
           + G  G  N  + VDGAWK  K+     AA+GW IE  G  +   G ++   N  Q E  
Sbjct: 19  ITGVVGAYNTVITVDGAWKMNKEVARVDAAIGWTIEVNGELLWEGGDKVLTHNALQTEAL 78

Query: 64  AILISKKVVESHTQSITIL-TDSSNNIMALREYPCCRIELATICNEIRYLADRLETCIII 123
           AIL   K  ++ T S  IL TD SN + +++ YP C++E+AT+C +I  +A  ++  ++I
Sbjct: 79  AILTGLKEAKNRTLSSVILRTDCSNIVASIKSYPNCKMEVATLCFDIISIASTMDNVVLI 138

Query: 124 KCHKDRVKSAHDLACHAR 141
           KC ++ V+ AHDLA  AR
Sbjct: 139 KCDRNDVRRAHDLAKKAR 156

[Close]

BLAST of Spo04654.1 vs. NCBI nr
Match: gi|902240281|gb|KNA25955.1| (hypothetical protein SOVF_001980 isoform C, partial [Spinacia oleracea])

HSP 1 Score: 94.7 bits (234), Expect = 2.100e-16
Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 1


		  
Query: 4   LKGEYGETNARLIVDGAWKKAKKKKYSIAAVGWVIEAEGRRINSEGHRLNAINTGQAEMK 63
           + G  G  N  + VDGAWK  K+     AA+GW IE  G  +   G ++   N  Q E  
Sbjct: 18  ITGVVGAYNTVITVDGAWKMNKEVARVDAAIGWTIEVNGELLWEGGDKVLTHNALQTEAL 77

Query: 64  AILISKKVVESHTQSITIL-TDSSNNIMALREYPCCRIELATICNEIRYLADRLETCIII 123
           AIL   K  ++ T S  IL TD SN + +++ YP C++E+AT+C +I  +A  ++  ++I
Sbjct: 78  AILTGLKEAKNRTLSSVILRTDCSNIVASIKSYPNCKMEVATLCFDIISIASTMDNVVLI 137

Query: 124 KCHKDRVKSAHDLACHAR 141
           KC ++ V+ AHDLA  AR
Sbjct: 138 KCDRNDVRRAHDLAKKAR 155

[Close]

BLAST of Spo04654.1 vs. NCBI nr
Match: gi|902202763|gb|KNA14358.1| (hypothetical protein SOVF_108130 [Spinacia oleracea])

HSP 1 Score: 90.1 bits (222), Expect = 5.300e-15
Identity = 59/141 (41.84%), Postives = 82/141 (58.16%), Query Frame = 1


		  
Query: 3   VLKGEYGETNARLIVDGAWKKAKKKKYSIAAVGWVIEAEGRRINSEGHRLNAINTGQAEM 62
           ++KG +  T  RL+VDGAWKK KK   S+AA+GWVI  +   I   G R+ A++  QAE 
Sbjct: 219 LIKGVFNYTGTRLMVDGAWKK-KKNGDSVAAIGWVINHDQNVIAKGGGRIRAVSGLQAEG 278

Query: 63  KAILIS-KKVVESHTQSITILTDSSNNIMALREYPCCRIELATICNEIRYLADRLETCII 122
            AIL   K+  +   + IT L+DS      L+E     IE+A+I +EI   A   + C I
Sbjct: 279 YAILRGLKEANKCGCRQITTLSDSRTICKLLQEGKDGPIEIASILSEIIAFAGSFDFCSI 338

Query: 123 IKCHKDRVKSAHDLACHARRH 143
           +   +DRV+ AHDLA  AR+H
Sbjct: 339 VNVSRDRVRPAHDLAYIARKH 358

[Close]

BLAST of Spo04654.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QBY3_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_202050 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.900e-24
Identity = 59/134 (44.03%), Postives = 89/134 (66.42%), Query Frame = 1


		  
Query: 4   LKGEYGETNARLIVDGAWKKAKKKKYSIAAVGWVIEAEGRRINSEGHRLNAINTGQAEMK 63
           +KG Y   +A ++VDGAWKK +KK Y+++AVGW I  +GR I S G R+ A++  Q E K
Sbjct: 177 IKGAYNSNDAIVMVDGAWKKVRKKSYAMSAVGWNICIQGRDIESGGMRVQALSAEQTEAK 236

Query: 64  AILIS-KKVVESHTQSITILTDSSNNIMALREYPCCRIELATICNEIRYLADRLETCIII 123
            +L   +K +  +  SI ILT  SN + AL+++P C++EL +IC+EI +LA+    C I+
Sbjct: 237 VVLQGVRKAIAINLPSILILTYCSNVVKALQDFPSCKLELTSICSEIIWLANAFVNCTIV 296

Query: 124 KCHKDRVKSAHDLA 137
           KC +D ++ AH LA
Sbjct: 297 KCSRDNIRKAHTLA 310

[Close]

BLAST of Spo04654.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2L9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_001980 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.500e-16
Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 1


		  
Query: 4   LKGEYGETNARLIVDGAWKKAKKKKYSIAAVGWVIEAEGRRINSEGHRLNAINTGQAEMK 63
           + G  G  N  + VDGAWK  K+     AA+GW IE  G  +   G ++   N  Q E  
Sbjct: 19  ITGVVGAYNTVITVDGAWKMNKEVARVDAAIGWTIEVNGELLWEGGDKVLTHNALQTEAL 78

Query: 64  AILISKKVVESHTQSITIL-TDSSNNIMALREYPCCRIELATICNEIRYLADRLETCIII 123
           AIL   K  ++ T S  IL TD SN + +++ YP C++E+AT+C +I  +A  ++  ++I
Sbjct: 79  AILTGLKEAKNRTLSSVILRTDCSNIVASIKSYPNCKMEVATLCFDIISIASTMDNVVLI 138

Query: 124 KCHKDRVKSAHDLACHAR 141
           KC ++ V+ AHDLA  AR
Sbjct: 139 KCDRNDVRRAHDLAKKAR 156

[Close]

BLAST of Spo04654.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S3X6_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_001980 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.500e-16
Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 1


		  
Query: 4   LKGEYGETNARLIVDGAWKKAKKKKYSIAAVGWVIEAEGRRINSEGHRLNAINTGQAEMK 63
           + G  G  N  + VDGAWK  K+     AA+GW IE  G  +   G ++   N  Q E  
Sbjct: 14  ITGVVGAYNTVITVDGAWKMNKEVARVDAAIGWTIEVNGELLWEGGDKVLTHNALQTEAL 73

Query: 64  AILISKKVVESHTQSITIL-TDSSNNIMALREYPCCRIELATICNEIRYLADRLETCIII 123
           AIL   K  ++ T S  IL TD SN + +++ YP C++E+AT+C +I  +A  ++  ++I
Sbjct: 74  AILTGLKEAKNRTLSSVILRTDCSNIVASIKSYPNCKMEVATLCFDIISIASTMDNVVLI 133

Query: 124 KCHKDRVKSAHDLACHAR 141
           KC ++ V+ AHDLA  AR
Sbjct: 134 KCDRNDVRRAHDLAKKAR 151

[Close]

BLAST of Spo04654.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2I3_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_001980 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.500e-16
Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 1


		  
Query: 4   LKGEYGETNARLIVDGAWKKAKKKKYSIAAVGWVIEAEGRRINSEGHRLNAINTGQAEMK 63
           + G  G  N  + VDGAWK  K+     AA+GW IE  G  +   G ++   N  Q E  
Sbjct: 18  ITGVVGAYNTVITVDGAWKMNKEVARVDAAIGWTIEVNGELLWEGGDKVLTHNALQTEAL 77

Query: 64  AILISKKVVESHTQSITIL-TDSSNNIMALREYPCCRIELATICNEIRYLADRLETCIII 123
           AIL   K  ++ T S  IL TD SN + +++ YP C++E+AT+C +I  +A  ++  ++I
Sbjct: 78  AILTGLKEAKNRTLSSVILRTDCSNIVASIKSYPNCKMEVATLCFDIISIASTMDNVVLI 137

Query: 124 KCHKDRVKSAHDLACHAR 141
           KC ++ V+ AHDLA  AR
Sbjct: 138 KCDRNDVRRAHDLAKKAR 155

[Close]

BLAST of Spo04654.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4B6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_108130 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.700e-15
Identity = 59/141 (41.84%), Postives = 82/141 (58.16%), Query Frame = 1


		  
Query: 3   VLKGEYGETNARLIVDGAWKKAKKKKYSIAAVGWVIEAEGRRINSEGHRLNAINTGQAEM 62
           ++KG +  T  RL+VDGAWKK KK   S+AA+GWVI  +   I   G R+ A++  QAE 
Sbjct: 219 LIKGVFNYTGTRLMVDGAWKK-KKNGDSVAAIGWVINHDQNVIAKGGGRIRAVSGLQAEG 278

Query: 63  KAILIS-KKVVESHTQSITILTDSSNNIMALREYPCCRIELATICNEIRYLADRLETCII 122
            AIL   K+  +   + IT L+DS      L+E     IE+A+I +EI   A   + C I
Sbjct: 279 YAILRGLKEANKCGCRQITTLSDSRTICKLLQEGKDGPIEIASILSEIIAFAGSFDFCSI 338

Query: 123 IKCHKDRVKSAHDLACHARRH 143
           +   +DRV+ AHDLA  AR+H
Sbjct: 339 VNVSRDRVRPAHDLAYIARKH 358

The following BLAST results are available for this feature:

BLAST of Spo04654.1 vs. NCBI nr
BLAST of Spo04654.1 vs. UniProtKB/TrEMBL
BLAST of Spo04654.1 vs. ExPASy Swiss-Prot
BLAST of Spo04654.1 vs. TAIR (Arabidopsis)

BLAST of Spo04654.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902128353\|gb\|KNA04183.1\|	2.8e-24	44.0	hypothetical protein SOVF_2020...	[more]
gi\|902240280\|gb\|KNA25954.1\|	2.1e-16	38.4	hypothetical protein SOVF_0019...	[more]
gi\|902240279\|gb\|KNA25953.1\|	2.1e-16	38.4	hypothetical protein SOVF_0019...	[more]
gi\|902240281\|gb\|KNA25955.1\|	2.1e-16	38.4	hypothetical protein SOVF_0019...	[more]
gi\|902202763\|gb\|KNA14358.1\|	5.3e-15	41.8	hypothetical protein SOVF_1081...	[more]

BLAST of Spo04654.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QBY3_SPIOL	1.9e-24	44.0	Uncharacterized protein (Fragm...	[more]
A0A0K9S2L9_SPIOL	1.5e-16	38.4	Uncharacterized protein OS=Spi...	[more]
A0A0K9S3X6_SPIOL	1.5e-16	38.4	Uncharacterized protein (Fragm...	[more]
A0A0K9S2I3_SPIOL	1.5e-16	38.4	Uncharacterized protein (Fragm...	[more]
A0A0K9R4B6_SPIOL	3.7e-15	41.8	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo04654.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo04654.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like domain	GENE3D	3.30.420.10		coord: 14..95 score: 4.
None	No IPR available	PFAM	PF13456	RVT_3	coord: 17..139 score: 2.

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0042793	plastid transcription
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo10030	0.68	Barchart \| Table
Spo00256	0.66	Barchart \| Table
Spo02649	0.65	Barchart \| Table