Spo04683 (gene) | SpinachBase

Overview


Name	Spo04683
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Inner membrane import protein Tic22, putative
Location	chr1 : 6671834 .. 6680526 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGCCCCTTTTCCTTTTGTTATAACACGGTGTTAACTGCTAAGTGCTAACCGCAGAAACAACGTTCAATGGTCGAAGGAAGTGGAATGGACTCTTCAACACCAGCAACCGGTGGCCGCCCAAATCCACTACTATCAGTCTCCACGTTTATGCACCGCCTCGGCGCTGAACTCACCACCCGCCTTGACGAAAGCCGCCGACTCGCCGGAAATTTCATCTCCACTCTATCTCCAGCGTCACCTCGTGGCCGCACTACCACTCCTGTTTCTCTCTCCTTGCCTTTCGCCTCCGTTGGACAGGCTAAGCCGTTGCAAGACGTCGCTTTGAGCACCGACCATGTGGCGAAAAGCCTCGTCGGCACCTCCGTTTTTACAGTTAGCAATACGAACAATGAATTTGTGTTGATTTCCGACCCTAATAATGGCGCTAAGTCTATTGGTTTGCTTTGCTTTCGCAAAGAGGATGCCGAGGCTTTTCTTGCTCAGGTTTTGCTTCGCTGTTTCTCTCTCCTTCGTTGAATTTCAGAATTATCAGTTGAATTTGGGAATTGAATTTGCTTTTTTTGGCACTGAAATTTCAGGTTCAGTTGAGGAGGAGGGAGCTGCGGAGTCAGGCTAAGATTGTTCCAATTAGCCTAGACCAGGTGACTAGTGCTAATTACTTCGTATTTGGCACTAACTCCGTCCGGAATTAATTTCACGTTACCAGTTAAACTTACATTATAAGTCATTATTAATTCCGGACCTAGGGAATTATGCATAGTTTTGGCTTACAAGATACAGTCTGCTAAAATAAAAAGTAGTGAACACAATCAATTTTAGTTGGTTGTGTTCCTTTCATTGAGATAGTGAAATTTGTGAATATGACTGTGATTGTTTGATGGTCTTGTTTTGATTGAGTGTTTAGAGAGATAGTTTCCATGGTAAAAGGGAGTTGTTGGTGGGTTTGATAGGGTGATATGGAGACGGCTGTAGATATGTTTGTTATGTGACCGATGAGATGCCATAACAGTGCATAACTGTTGCACTGTTGGCAATGGTAAGAAAGAGAAAATAAAACATCGAACGTTGTTACCGCTAATTGTTTGCTTGTAGCCTGACCCAATGAAAGACTTACGAATGTCGGGTCTTTTATGCTTTATATAAAGATACTCAGTACTCATCCACCACAGCAGGATCCTCACTTGGTGTTGTTTACAACCCTAGAAATTTGTGAAGTGCTGTTGTTGGGATAGGGAAATGATTCAGATAGATGATATTTAAGTGGTTAGTTCTATAATTATTTTCTGTTTTGACGACGCTTGAGATTTTTTGGCGACTTTGCTGGTATACTAAATTAGGGTTTTGACTTTTAAATTGTCGGAAATAACGTGTTAAAACAAATTGTAGCACTAACCACTTAAATTGCCCCTGTTGTATATTGTCAGTGTCCAAAATTATCCTTTGCCTTTCATATTTTAGTTGGTCACCAATGTGTGAATTTCCACCTGTATAAGAGGCATTGGGCAGTGTTTTAATGGTTAATAATTCATGATGAATTGCATAAAACAGATGGGTGAAAATCAAATCTAAAGGTGTCGTTGCAAGTTAGCATATGTAACTATGTAAGAGGTGGTTACAGACATTTTTCTTGTAGTCTGCGAAAGTTTAGTTTGTGTGTCTCTTGATTAGTTGATTGCACATTATTGTTCATCTTTCCTCCCTTATTCTGTTCCTCCTTTTCCTTTCCTCCTTTTCCTCTCAGGAGTCTCGGGTCCTGCACCCCCCTTCTCTTTTACTTCATGTTTTTTCCTTTATGATTTCTTCCAAACAGTGAACATTTGTGCATACATGTTAAACTTTCTTTTCCTTTATAATTTAAACAGTAAACACTTGTGCAGGTGTACATGTTAAAGGTTGAAGGAATTGCATTCCGATTCTTGCCTGATCCGGTCCAAATAAAGAACGCACTAGATGTAAGCTTTCTGTTTAAGCGATTTGTTTGTTGAAGTTGGTTGTTAACTATTTAACTGAATCTGATCCATATGGAGGGTCTTAAGCTCTTAACAGTTTTGTAAAAGGACTTAATGGCACTAAGTGTTTCCCTAATTTGAACTCTCTTCTTTCCGGATAAACTAGAGTCTAAATGTGTTTAAAACTGCAGAACTTAAAAGTTAGTATTAACATTACCTTCGCTGGGTAAGAATAAATCTAATGGTCTTACTTTCAGGTATTTGATATAAGTTACCAATATTTTGAGCATGCCTGGATTGTACGTACTGTATTAAAGGGGTAAATAAAAACAGCCTAAAGAAATGAAGGTTGTTGCATGGTGGAATGGAAGAAACTAGCTGGTGAGCATCTGAAGAAGGGGGAGGGATGAAGGAATATTTACCCTTTTTTTGGGGGTAACAGTTACGCACCATTCCCCTAGGGAAACTATTACCTAAAATGGGGGTAACGATTCCCTCATCCCTTCCTCCTTTCTCACATCCACCACTACATTTTCTCCTCTATCACATGCTCCACTCACCTTCTTTCTCCTATTACCTCTTCAATGCATTATTCCCAAATTTTAATCCAAGTGTGTCCTCAAATTATCAAAAAGGGAACTAGGCTTAGCTTCACTCACTAAGTCAAGGGCTCTTGAAGGTTTTAGCTTCACTCTCTGACTTCCAAAAGAAAACAGACGAAATTTTTTCCAATGGCAAATTGAAAATTAGGTACTAATTGTTAGGCTATATTTGAAATAAGATAAGAACAAACCCCTCTTCTAAATTGATAAATTTCCTCGTAAATTAGCTGCTGTCCTCTCCCATTTTTCAAGATTAGGAAAATTAGGTGTTTCAAGTTCTCCATTATCTTCGAAATATGTTTGCAATTATTGCACTTTCTGTTATACTGAACTTTTTGATATGCCCTTCCATATTCATGTTGGTATCGGACGCATCGTGTTGGTTCTTAGGTAAAGTCCTTCAGATATACTTCCTCCGTCCCTTTTTATTCTTTACGTTTGATATCATGCATGCGATTTAACAACTATTTAATATTCATACAAATTCCTCCTTTTTTTTTATCAAACAATGCAAATTACGTTTATTGATAGTATTTTCACTTTTATCCAAAACTAGCTCTTGAGCCCGTTCAAAGAACAGGAAATTAGTGGTTCTTTAAGCGTCTTTTAAAGTTCTAATTTTTTTGAGGCCCTAGGACTTGTGATTTTAGCGGTAATATATGTATGGTTTAAATAAATGTGAATTTTGAAAGTTGAAAGAATATATATATACATTAAATTAAATGGTGAATTAATATTGGGTGTTAAAGAGGGAGATGAAATGGATGGGGTTGAATGTATAATGAATTAATTTTGAATTGACGTTGAAGGATGAAGATGGAGTGGAAGAGGCGTTAGAGGTGTAAAATATAGGAAACAACAAAATGAACAATTGAAAAAAAAATTGATGGAGGAAAAGAAGGGATGATATGTGTCATTTAATCGTCTATGGTTTTTCTCTTTATAGACTAGGTATAGATATAACATTGGGAAGTGTGAGAGATTTAATGTTTCAATGGGAAAATGTGAAAGGTTTAGTATCCCAATGATTTTAATTAATTAAAATAATCAAGTGCACGTTTTTTGACAGAGTATTAAGGACATTAATGATACAATATAAAAGGAAAGATTCTAAATGTAAAGATTAAAATGGGACACTAGAAATGGAAAGCATAAAGAATAAAAAGGGACGGAGGGAGTAATAGATAAAACAAGGTGTGAAAACAATAGACATATTCGTGTCTGATACACTCTAACAAAATCCCCCCTTGGTGGTTATGGTTCTTAACAATAGTGGACACTTGCTGTGTTTCCATGGATCTTTATTCTTTAACATCAGATTTGGATATTTAAAGTTTTGGGTGTTAAGCCTTTGAGAACGTAATTGCTCTTCAAATGCATCCCATGTTAGCACACTAATGTATAGGAAGTACGGCATATAAAAGGCTAGGGTATACAAAGGCTGCAAATTATGATATCTTTATCTGCCTGTCATAGGAATACTATATAAATATGTTTTTCTGAGTGAGCTATATAAATATCTGATCCTACTTTATTCACAATAGCTTACTTTTTTTGCTGCAGTTGAAAGCATCGGAGACTAAAAGTGGGTTTGACGGTGTTCCTGTGTTTCAGGTGTGCTAAATTTCTCTATGTTTCTACCAATTCGTGGTTACCAGCTAAGATTCATTCATGCCTGATCATAAGTTTAATTTGCACATTCTTTCAGTTGCCCTTGTAGGTTGTATAATTCCCGTTTATAAAATTGCATAGGCAGTTGTACTGAATTCCCGTTCGTCCTTTTCTCTAATCATGTATGTTTCGTTTAGGCCACTCTCTCTAATAGGAGTCACAATTTTATTGATGTTTGTTATTTAGACTCTGATCATGCGTATATAAAACTGCGTAGGTAGTTGTAGAAGCAATCAAAAGAGTGATGGTACTGTCTCGATTTCATGCTGTCTTAACTGTGTCTATACCATATAGTATGTTTTTCTTACAGAACTAAAGTTGCTTTCAAATAGTCAAATAAGGATGTTTAAAGTTTAGGAAACGACTATTGTTTTAGTTTAAGAATCAAAATAGTACTTAGCATGGTTGCACAAGACTGGGGAAAGACCGAAAGACTCGGTTAAGCTTGCTAACCTGATGGCCCTGGTTACCTGGAATTTCTATTTAGTGTTTATCCTATTTTACTCATTTAAGTTCTGGCTACGTGTTTGAACATAGATCTCAAACTTCAGTTGGTTTTGTGGCATGTTAGGATTTTATATGGAAAACCTTGTTGTCGAGGCACCATTCTCATAGAATATTTGTTATTTTTGGTGTTTGGTTTAACATAGGTTTGGGGGCATGACACTTAAACATTAAGTCCTCAAAAACCTCTCTTAAAGGTGGTTGTTTTAGTGTAGTTATTGGTGTTAATCTTCAGTTATTTTTATTTTCTAGTCTTGAAGCAGCTAGTTCTTCATCCAGCTGGTTGAAACAGCCCGTTCAGTCTTACTTTTGCGACCTTCTAATGCAAAGATTTCTCTATTCTCTACAACTAGGAAAGATTTTAATAATTTGTAGACATGGTTGAGATCTTTTCTTTATAAGCGCCAAACTGTATCAGACTTTCCTTTTAGTTGCCAGTTGCCACCTCTGTTACCACTTACCACCTTTTGCAACTGTTGGATATGCCTTTAATATGTCTGTCTCTTCGAGTGACCCAGCACAGGGGTTTTGCTCCCCAGTGAGTTGGGGGTCCAGGAGGAGAAGCGCCCCGGTTTTGGGAAACTTGCGGTGCGCATTTTATTGGGCTACAGTTTTTTGTTTAGGATTGTTTGTCTGGCCTATCAAGTTTCTGTCTGAGAGTAATATAAACTCCCTAGTTCTTCAAGTGGCCCAATTCTGTGATCAGTTTCCTCAAGGTTAATAAAGCTTCCTCTCCTCTGCATCTGGACGTAGCTAACACATATTAGTGAACCACATACATTTGTGTTGTTGTTTGTTGTTTTAACTTATCTTTCTCGCACCCGTTATAATATAAACCTTTTGGGGAATGAAATTGGCTATTGATGGCAAGACGCAAGAGATTATATTTGGTCACTCCTGTTCTCTTCTGCATATCTCAACCAGGTTCAACCCTCGTCGTGACTTCAGTCCCAAGATTCTCAACCAGATTCAACCCTCGTGACTTCAATCCCAAGATTCTTAAGATTGATGACATGTAATTAAAATAAGTGTTGCAAGATGTAATTGTTTCGTTCTTCTATTAGCATTTCTGATTCCACTTGTTATAGTAGCATTTTTTGTATGGTAATCTAAGAGTCTTATTGTGTTTGGTTTCCTTAGTCAGCAATATGTGAATATTATTGCTCAAGAATCACGATTAGTTCTCTCTCTTAATACTTCTCTTGAAACCTAGATTTATTACTTATTCATATGTGCATGTGAATTGATTTTCCCTCATTTTTAACTTTTTTTTTTTTAATATTGTTGACCGATGCAGTCAGATCTTCTGGTTGTGAAGAAGAAAAATAAGCGGTACTGCCCTATTTATTTTCGAAAGGTCAGTTGTTCATTAGTTTTAATGGTATGCTCATCAATGAGAATTGCCTCAACGCTGATGTTAATGCTTCTTTGCTGCAGGAAGATATAGAGAAAGAACTGTCTCAGAGGGCATCGCGAGGGCGGGGACCTTCTCAGAACATAGTGGTATATTTTAAACCGGTCTCCATTTTATGTATGAAACAATTAGAAATGCTGATTTTGGTATAGTTTTGTTTGTACAAAATCAAGAGTTGGCTCTCACCCAAAACACATGAAAAAAAAGTCCCTTTTTCTTGTAAATCAAGGGTTTTCATATGCTTCTGTCTATGTTAGTTAAGGAACGATAAACTATATGTATTCCCTCTCCCCCCGCCTAGCAAGTAAAATTCACATGTTTCCAAGAGGGAGTTTGGAGACAGATTTGCCAGTTCTGGTCTGCTTTTAAGACTCGAGTGGACTTGATGTTCAAGTGCCAGAAATTTAAATTGCACGGCCATGAAGCCTGCTCACATATAAAATTTTATACTTCTGGAGCATCTTCCATTGTTTTTTATTCTTAGCTTCCCAGCCTCTGGTGTCTCCAGCTTCAACTTCGTAGTTATGCTTCTTAGAAATCCATGTTCTTTTCTTGCCTTTGTAATTAGATGTTGCTGCAGCCTGAGTTGTTTGTCCCTCTTTTGTACCCATTCATTTTGGTGGGGAGAGTGGTGAAGAAAAAACAATCAGAAGAGCAACAGAGGTCACTGTCCTATGTGTTAATCTGGATGTCCTGTGACTCCTATCTTGTAATTCTCCTTGCATGAAAAAATGACGAGCAAGGATATTGTTTTCTTTTTGCTACATTAAAGAGCATGTTTTCTCTGTATTAATCTCTCCTCCTCTTCAGTCCTGGAGCTACATGCAAGATATAGCAGTACCTGGCTTGATAGAGACCTTCCTGTACTGTTAATTTTTTAAAATAAATGTTGGTTCTTGCTGCTGTTCGGAAATGAAAAGCCCCCTTCATAATTTCATATAATCATACACCATTCCAAACCTTAAATGAGTAAATTTTGTGTACGCACGTGTATAAGAAGCAGGAATTATGGCTGAAAGTCCTTGCTGTTCATTCTAAGTTAGTTTTCTTGTGAATCAAAACTCCCAAGACTGATTTTTTACTTTCATCCTTTTTTTGAATTGACAATTTGATCTGACTTGACATGAGTGGAGTCATCTGTGGCTTCTGCCATCCGTTAAAACTTCCATTTGAAGTTTTGAACTATATCTTGCCTTGCCCTAATTTTTTTGTCTTATTTACACAATCCATGGATTTTCCAACTTGAGAATATAAGATGCAGATTTCACAGGAAGAAGAGAGAATAAATGTTTGTTCATTTTGCTGCTGCTGTCAGTAGGATACTTTTATCAGTTTATCTGATTTCTCCACAGATTCTTTGAAACATGATGTTTCAGTAATGCAGAATGATCAATAGGTTCTTTTGGCTCTTTATAAATTACCTTTGTATAGCGTTCAGCCGTTCACTCTGTTTCACGTTCTGTGTGTTCCTTTGCGAATAAGTTGTAGTCCATGACTCTATATCAATGTTTTAATTAACCTGATTGCTCTGTTTTGTTGCGGGTGTCAACAGGTTGGGAGTTTGGAAGACGTTTTGAAGAAAATGGAGGTAAAATATTGTGTTTTACCAGTTTGTGGCTATTCTTCTCCTGTTTTTTCTTTCTTTGAAGTAATTCTTTTTCATATCTATATGATTTCTTAGTCCCAACAAAATAGCGGTGGGGGAAATTCCCTTCACATGTTAATTAATTTGTCTCTAGTTTATGTTCTCCTTAGTTATGTTTGTGGATGTTGGTCACAGATAAACGAGAAGAATTCTGGCTGGGGCGATTTTATTTTTATTCCACCTGGTAAAAGCCATCTACAACATATTCAAGAGGTGGCAAAATAGCTTGATGGTGTGCATTTCTTCTGCCTGTAATTCTTGATTGAGAAGCAGAGAACGTACTGTGCAGCATTGAAGAATGAAGACTCGAGGTCTCTTCTTCATCTCTTTAAAGTTTAAACCCCACCCTAAAAAAAAACACCATTTTCTTTTCGGTTTCTGCTTTGAATGCTATTGTTCTATCAAGTTTGCAAGCTGCGATTTAAAAGAATGATATCAGTTTTCATGAAGCAGGTTTATCAAATGGCAGAAAATGGTGTCTGCATTTATCGCGGAGGATTTACACTTTATCTGCAATAGTTTAGTCATAGTTGTCATCCCATTCTTAAGTAAGGTAGATTTTGTTGATGGAAGAGAGTGGTGCACGTTTGACTGAATTAGATGGGTCTTCTTTGCTTGTTATTAACCTATATGTGCTTACATTCGGGCACTTGTTCATCATAATGATGTTTAATTTTCGTGTTAGTGTGCACTTCAGAATTTCATACAGTGTGCACTTAGCTGCTCGTTTCTGCACTTTTACTTTGAAGATTCTACACTGGCATTTGATTGTGTATCATGCTTGATCAAATCTTGGTTTGTTTGACAAAACGCACAGATATGCGATTATTCTTCTAATCTTGTACTACCTCTGTTCCTGGAAATTCTTTACACCTTGGAATATGTGCCCGAAGTATGAAAATTGAC

mRNA sequence

TATGCCCCTTTTCCTTTTGTTATAACACGGTGTTAACTGCTAAGTGCTAACCGCAGAAACAACGTTCAATGGTCGAAGGAAGTGGAATGGACTCTTCAACACCAGCAACCGGTGGCCGCCCAAATCCACTACTATCAGTCTCCACGTTTATGCACCGCCTCGGCGCTGAACTCACCACCCGCCTTGACGAAAGCCGCCGACTCGCCGGAAATTTCATCTCCACTCTATCTCCAGCGTCACCTCGTGGCCGCACTACCACTCCTGTTTCTCTCTCCTTGCCTTTCGCCTCCGTTGGACAGGCTAAGCCGTTGCAAGACGTCGCTTTGAGCACCGACCATGTGGCGAAAAGCCTCGTCGGCACCTCCGTTTTTACAGTTAGCAATACGAACAATGAATTTGTGTTGATTTCCGACCCTAATAATGGCGCTAAGTCTATTGGTTTGCTTTGCTTTCGCAAAGAGGATGCCGAGGCTTTTCTTGCTCAGGTTCAGTTGAGGAGGAGGGAGCTGCGGAGTCAGGCTAAGATTGTTCCAATTAGCCTAGACCAGGTGTACATGTTAAAGGTTGAAGGAATTGCATTCCGATTCTTGCCTGATCCGGTCCAAATAAAGAACGCACTAGATTTGAAAGCATCGGAGACTAAAAGTGGGTTTGACGGTGTTCCTGTGTTTCAGTCAGATCTTCTGGTTGTGAAGAAGAAAAATAAGCGGTACTGCCCTATTTATTTTCGAAAGGAAGATATAGAGAAAGAACTGTCTCAGAGGGCATCGCGAGGGCGGGGACCTTCTCAGAACATAGTGGTTGGGAGTTTGGAAGACGTTTTGAAGAAAATGGAGATAAACGAGAAGAATTCTGGCTGGGGCGATTTTATTTTTATTCCACCTGGTAAAAGCCATCTACAACATATTCAAGAGAAGCAGAGAACGTACTGTGCAGCATTGAAGAATGAAGACTCGAGGTCTCTTCTTCATCTCTTTAAAGTTTATCAAATGGCAGAAAATGGTGTCTGCATTTATCGCGGAGGATTTACACTTTATCTGCAATAGTTTAGTCATAGTTGTCATCCCATTCTTAAGTAAGGTAGATTTTGTTGATGGAAGAGAGTGGTGCACGTTTGACTGAATTAGATGGGTCTTCTTTGCTTGTTATTAACCTATATGTGCTTACATTCGGGCACTTGTTCATCATAATGATGTTTAATTTTCGTGTTAGTGTGCACTTCAGAATTTCATACAGTGTGCACTTAGCTGCTCGTTTCTGCACTTTTACTTTGAAGATTCTACACTGGCATTTGATTGTGTATCATGCTTGATCAAATCTTGGTTTGTTTGACAAAACGCACAGATATGCGATTATTCTTCTAATCTTGTACTACCTCTGTTCCTGGAAATTCTTTACACCTTGGAATATGTGCCCGAAGTATGAAAATTGAC

Coding sequence (CDS)

ATGGTCGAAGGAAGTGGAATGGACTCTTCAACACCAGCAACCGGTGGCCGCCCAAATCCACTACTATCAGTCTCCACGTTTATGCACCGCCTCGGCGCTGAACTCACCACCCGCCTTGACGAAAGCCGCCGACTCGCCGGAAATTTCATCTCCACTCTATCTCCAGCGTCACCTCGTGGCCGCACTACCACTCCTGTTTCTCTCTCCTTGCCTTTCGCCTCCGTTGGACAGGCTAAGCCGTTGCAAGACGTCGCTTTGAGCACCGACCATGTGGCGAAAAGCCTCGTCGGCACCTCCGTTTTTACAGTTAGCAATACGAACAATGAATTTGTGTTGATTTCCGACCCTAATAATGGCGCTAAGTCTATTGGTTTGCTTTGCTTTCGCAAAGAGGATGCCGAGGCTTTTCTTGCTCAGGTTCAGTTGAGGAGGAGGGAGCTGCGGAGTCAGGCTAAGATTGTTCCAATTAGCCTAGACCAGGTGTACATGTTAAAGGTTGAAGGAATTGCATTCCGATTCTTGCCTGATCCGGTCCAAATAAAGAACGCACTAGATTTGAAAGCATCGGAGACTAAAAGTGGGTTTGACGGTGTTCCTGTGTTTCAGTCAGATCTTCTGGTTGTGAAGAAGAAAAATAAGCGGTACTGCCCTATTTATTTTCGAAAGGAAGATATAGAGAAAGAACTGTCTCAGAGGGCATCGCGAGGGCGGGGACCTTCTCAGAACATAGTGGTTGGGAGTTTGGAAGACGTTTTGAAGAAAATGGAGATAAACGAGAAGAATTCTGGCTGGGGCGATTTTATTTTTATTCCACCTGGTAAAAGCCATCTACAACATATTCAAGAGAAGCAGAGAACGTACTGTGCAGCATTGAAGAATGAAGACTCGAGGTCTCTTCTTCATCTCTTTAAAGTTTATCAAATGGCAGAAAATGGTGTCTGCATTTATCGCGGAGGATTTACACTTTATCTGCAATAG

Protein sequence

MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPSQNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQEKQRTYCAALKNEDSRSLLHLFKVYQMAENGVCIYRGGFTLYLQ

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04683.1	Spo04683.1	mRNA

Homology

[Close]

BLAST of Spo04683.1 vs. NCBI nr
Match: gi|902140000|gb|KNA04609.1| (hypothetical protein SOVF_198130 [Spinacia oleracea])

HSP 1 Score: 552.0 bits (1421), Expect = 7.100e-154
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1

		  
Query: 1   MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRG 60
           MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRG
Sbjct: 1   MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRG 60

Query: 61  RTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGA 120
           RTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGA
Sbjct: 61  RTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGA 120

Query: 121 KSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQI 180
           KSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQI
Sbjct: 121 KSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQI 180

Query: 181 KNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPS 240
           KNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPS
Sbjct: 181 KNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPS 240

Query: 241 QNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           QNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE
Sbjct: 241 QNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 282

[Close]

BLAST of Spo04683.1 vs. NCBI nr
Match: gi|731346045|ref|XP_010684246.1| (PREDICTED: protein TIC 22, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 442.6 bits (1137), Expect = 6.000e-121
Identity = 228/276 (82.61%), Postives = 248/276 (89.86%), Query Frame = 1

		  
Query: 7   MDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPV 66
           MD    A   R NPLLS+STF++RLG +LTTRLD+ RRLAG  ISTL+P+ PR RTT P+
Sbjct: 1   MDPPQSAPLVRTNPLLSLSTFINRLGTDLTTRLDDGRRLAGALISTLAPSPPRARTTAPL 60

Query: 67  SLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLL 126
           SLS  FAS+GQAK   +VA S++HVA +L GTSV+TVSNTNNEFVLISDPN+GAKSIGLL
Sbjct: 61  SLSSSFASIGQAKQSLNVASSSNHVANTLAGTSVYTVSNTNNEFVLISDPNDGAKSIGLL 120

Query: 127 CFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDL 186
           CFRKEDAEAFLAQVQLRR+ELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDL
Sbjct: 121 CFRKEDAEAFLAQVQLRRKELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDL 180

Query: 187 KASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPSQNIVVG 246
           KASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQR+SRGRG SQ IVVG
Sbjct: 181 KASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRSSRGRGLSQPIVVG 240

Query: 247 SLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           SLE+VLKKME++EKNSGW D IFIPPGKSH QHIQE
Sbjct: 241 SLENVLKKMEVSEKNSGWDDLIFIPPGKSHSQHIQE 276

[Close]

BLAST of Spo04683.1 vs. NCBI nr
Match: gi|747073904|ref|XP_011083929.1| (PREDICTED: protein TIC 22, chloroplastic [Sesamum indicum])

HSP 1 Score: 372.9 bits (956), Expect = 5.900e-100
Identity = 202/281 (71.89%), Postives = 228/281 (81.14%), Query Frame = 1

		  
Query: 9   SSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRR-LAGNFISTLSPASPRGRTTTPVS 68
           S+ P+ G  PNPLLS+STF+HRLG++L TRLD+++R  A  F + L PA P         
Sbjct: 5   SAKPSVGPPPNPLLSLSTFIHRLGSQLATRLDDTKRPAAAAFPAFLPPAPPH-------- 64

Query: 69  LSLPFASVGQAKPLQDVA----LSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSI 128
            SLPFASV Q +  Q  A    L+++HVA+ LVGTSV+TVSNTNNEFVL+SDP  G KSI
Sbjct: 65  -SLPFASVSQRQGKQTAASETSLNSEHVARRLVGTSVYTVSNTNNEFVLVSDPE-GVKSI 124

Query: 129 GLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNA 188
           GLLCFRKEDAEAFLAQV+ RR ELR  AK+VPI+LDQVYMLKVEGIAFRFLPDPVQIKNA
Sbjct: 125 GLLCFRKEDAEAFLAQVKSRRGELRGGAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNA 184

Query: 189 LDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELS--QRASRGRGPSQ 248
           L+LKAS+ KSGFDGVPVFQSDLLVVKKKNKRYCPIYF+KEDIEK LS   R SRG G SQ
Sbjct: 185 LELKASDIKSGFDGVPVFQSDLLVVKKKNKRYCPIYFQKEDIEKALSTVSRVSRGAGFSQ 244

Query: 249 NIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           +I+VGSLEDVLKKMEIN KNSGW D IFIPPGKSH QHIQ+
Sbjct: 245 HIMVGSLEDVLKKMEINGKNSGWEDLIFIPPGKSHSQHIQD 275

[Close]

BLAST of Spo04683.1 vs. NCBI nr
Match: gi|225458599|ref|XP_002284687.1| (PREDICTED: protein TIC 22, chloroplastic [Vitis vinifera])

HSP 1 Score: 372.1 bits (954), Expect = 1.000e-99
Identity = 204/274 (74.45%), Postives = 231/274 (84.31%), Query Frame = 1

		  
Query: 19  NPLLSVSTFMH----RLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPVSLSLPFAS 78
           NPLLS STF+H    RLGAEL +RLD++RRLAGN+        P  R + P+S SLPFAS
Sbjct: 8   NPLLSFSTFIHQHCLRLGAELASRLDDTRRLAGNW------PPPALRRSLPLS-SLPFAS 67

Query: 79  VGQ----AKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRK 138
           + Q    AK    VALS+DHVAKSL GT+V+TVSN+NNEFVLISDPN G KSIGLLCFR+
Sbjct: 68  MSQEARGAKRDLGVALSSDHVAKSLAGTAVYTVSNSNNEFVLISDPN-GIKSIGLLCFRQ 127

Query: 139 EDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLKASE 198
           EDAEAFLAQVQ R RELRSQA++VPISLDQVYMLKVEGIAFRFLPDPVQIKNAL+LKA++
Sbjct: 128 EDAEAFLAQVQSRTRELRSQARVVPISLDQVYMLKVEGIAFRFLPDPVQIKNALELKAAD 187

Query: 199 TKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQ--RASRGRGPSQNIVVGSL 258
            KSGFDGVPVFQSDLLVVKKKN+RYCPIYF+KEDI KELS+  R+SRG G +Q+I+VGSL
Sbjct: 188 IKSGFDGVPVFQSDLLVVKKKNRRYCPIYFQKEDIVKELSKVSRSSRGPGVTQHIMVGSL 247

Query: 259 EDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           EDVL+KME +EKNSGW D IFIPPGKSH QHIQE
Sbjct: 248 EDVLRKMETSEKNSGWEDLIFIPPGKSHSQHIQE 273

[Close]

BLAST of Spo04683.1 vs. NCBI nr
Match: gi|565376814|ref|XP_006354891.1| (PREDICTED: protein TIC 22, chloroplastic isoform X1 [Solanum tuberosum])

HSP 1 Score: 367.9 bits (943), Expect = 1.900e-98
Identity = 199/288 (69.10%), Postives = 238/288 (82.64%), Query Frame = 1

		  
Query: 10  STPATGGRPN--PLLSVSTFMH----RLGAELTTRLDESRRL----AGNFISTLSPASPR 69
           S P+TG  P+  PLLS+STF+H    RLGAELT R+DE++RL    A +FI    PA+  
Sbjct: 3   SKPSTGFGPSSSPLLSLSTFVHQHCSRLGAELTNRIDEAKRLSSKIAADFIQQPLPAAIG 62

Query: 70  GRTTTPVS---LSLPFASVGQA--KPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLIS 129
              + P+    LSLPFASV Q   K  ++  LS+D+VAK+L GTSV+TVSN+NNEFVLIS
Sbjct: 63  RSCSLPLHSYHLSLPFASVSQRQEKVAKNTGLSSDYVAKTLTGTSVYTVSNSNNEFVLIS 122

Query: 130 DPNNGAKSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFL 189
           DPN+ AKSIGLLCFR+EDAEAFLAQV+LR+ E+R  AK+VP++LDQVYMLKVEGIAFRFL
Sbjct: 123 DPNS-AKSIGLLCFRQEDAEAFLAQVRLRKGEVRGGAKVVPLTLDQVYMLKVEGIAFRFL 182

Query: 190 PDPVQIKNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRAS 249
           PDPVQIKNA++LKAS+ K+GFDGVPVFQSDLLVVKK+N+RYCPIYFRKEDIEKELS RAS
Sbjct: 183 PDPVQIKNAMELKASDVKTGFDGVPVFQSDLLVVKKRNRRYCPIYFRKEDIEKELSSRAS 242

Query: 250 RGRGPSQNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           RG   SQ+I+VG+LEDVLKKMEI+++NSGW D IFIPPGKSH QHIQ+
Sbjct: 243 RGSSVSQHIMVGTLEDVLKKMEISQRNSGWEDLIFIPPGKSHSQHIQD 289

[Close]

BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QBH7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_198130 PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 4.900e-154
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1

		  
Query: 1   MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRG 60
           MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRG
Sbjct: 1   MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRG 60

Query: 61  RTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGA 120
           RTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGA
Sbjct: 61  RTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGA 120

Query: 121 KSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQI 180
           KSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQI
Sbjct: 121 KSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQI 180

Query: 181 KNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPS 240
           KNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPS
Sbjct: 181 KNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPS 240

Query: 241 QNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           QNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE
Sbjct: 241 QNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 282

[Close]

BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BY32_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g162930 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 4.200e-121
Identity = 228/276 (82.61%), Postives = 248/276 (89.86%), Query Frame = 1

		  
Query: 7   MDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPV 66
           MD    A   R NPLLS+STF++RLG +LTTRLD+ RRLAG  ISTL+P+ PR RTT P+
Sbjct: 1   MDPPQSAPLVRTNPLLSLSTFINRLGTDLTTRLDDGRRLAGALISTLAPSPPRARTTAPL 60

Query: 67  SLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLL 126
           SLS  FAS+GQAK   +VA S++HVA +L GTSV+TVSNTNNEFVLISDPN+GAKSIGLL
Sbjct: 61  SLSSSFASIGQAKQSLNVASSSNHVANTLAGTSVYTVSNTNNEFVLISDPNDGAKSIGLL 120

Query: 127 CFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDL 186
           CFRKEDAEAFLAQVQLRR+ELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDL
Sbjct: 121 CFRKEDAEAFLAQVQLRRKELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDL 180

Query: 187 KASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPSQNIVVG 246
           KASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQR+SRGRG SQ IVVG
Sbjct: 181 KASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRSSRGRGLSQPIVVG 240

Query: 247 SLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           SLE+VLKKME++EKNSGW D IFIPPGKSH QHIQE
Sbjct: 241 SLENVLKKMEVSEKNSGWDDLIFIPPGKSHSQHIQE 276

[Close]

BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
Match: F6GZZ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g10590 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 7.000e-100
Identity = 204/274 (74.45%), Postives = 231/274 (84.31%), Query Frame = 1

		  
Query: 19  NPLLSVSTFMH----RLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPVSLSLPFAS 78
           NPLLS STF+H    RLGAEL +RLD++RRLAGN+        P  R + P+S SLPFAS
Sbjct: 8   NPLLSFSTFIHQHCLRLGAELASRLDDTRRLAGNW------PPPALRRSLPLS-SLPFAS 67

Query: 79  VGQ----AKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRK 138
           + Q    AK    VALS+DHVAKSL GT+V+TVSN+NNEFVLISDPN G KSIGLLCFR+
Sbjct: 68  MSQEARGAKRDLGVALSSDHVAKSLAGTAVYTVSNSNNEFVLISDPN-GIKSIGLLCFRQ 127

Query: 139 EDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLKASE 198
           EDAEAFLAQVQ R RELRSQA++VPISLDQVYMLKVEGIAFRFLPDPVQIKNAL+LKA++
Sbjct: 128 EDAEAFLAQVQSRTRELRSQARVVPISLDQVYMLKVEGIAFRFLPDPVQIKNALELKAAD 187

Query: 199 TKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQ--RASRGRGPSQNIVVGSL 258
            KSGFDGVPVFQSDLLVVKKKN+RYCPIYF+KEDI KELS+  R+SRG G +Q+I+VGSL
Sbjct: 188 IKSGFDGVPVFQSDLLVVKKKNRRYCPIYFQKEDIVKELSKVSRSSRGPGVTQHIMVGSL 247

Query: 259 EDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           EDVL+KME +EKNSGW D IFIPPGKSH QHIQE
Sbjct: 248 EDVLRKMETSEKNSGWEDLIFIPPGKSHSQHIQE 273

[Close]

BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
Match: M1ADY4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008017 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.300e-98
Identity = 199/288 (69.10%), Postives = 238/288 (82.64%), Query Frame = 1

		  
Query: 10  STPATGGRPN--PLLSVSTFMH----RLGAELTTRLDESRRL----AGNFISTLSPASPR 69
           S P+TG  P+  PLLS+STF+H    RLGAELT R+DE++RL    A +FI    PA+  
Sbjct: 3   SKPSTGFGPSSSPLLSLSTFVHQHCSRLGAELTNRIDEAKRLSSKIAADFIQQPLPAAIG 62

Query: 70  GRTTTPVS---LSLPFASVGQA--KPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLIS 129
              + P+    LSLPFASV Q   K  ++  LS+D+VAK+L GTSV+TVSN+NNEFVLIS
Sbjct: 63  RSCSLPLHSYHLSLPFASVSQRQEKVAKNTGLSSDYVAKTLTGTSVYTVSNSNNEFVLIS 122

Query: 130 DPNNGAKSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFL 189
           DPN+ AKSIGLLCFR+EDAEAFLAQV+LR+ E+R  AK+VP++LDQVYMLKVEGIAFRFL
Sbjct: 123 DPNS-AKSIGLLCFRQEDAEAFLAQVRLRKGEVRGGAKVVPLTLDQVYMLKVEGIAFRFL 182

Query: 190 PDPVQIKNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRAS 249
           PDPVQIKNA++LKAS+ K+GFDGVPVFQSDLLVVKK+N+RYCPIYFRKEDIEKELS RAS
Sbjct: 183 PDPVQIKNAMELKASDVKTGFDGVPVFQSDLLVVKKRNRRYCPIYFRKEDIEKELSSRAS 242

Query: 250 RGRGPSQNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           RG   SQ+I+VG+LEDVLKKMEI+++NSGW D IFIPPGKSH QHIQ+
Sbjct: 243 RGSSVSQHIMVGTLEDVLKKMEISQRNSGWEDLIFIPPGKSHSQHIQD 289

[Close]

BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HS19_SOLCH (Uncharacterized protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.900e-98
Identity = 199/288 (69.10%), Postives = 237/288 (82.29%), Query Frame = 1

		  
Query: 10  STPATGGRPN--PLLSVSTFMH----RLGAELTTRLDESRRL----AGNFISTLSPASPR 69
           S P+TG  P+  PLLS+STF+H    RLGAELT R DE++RL    A +FI    PA+  
Sbjct: 3   SKPSTGFGPSSSPLLSLSTFVHQHCSRLGAELTNRFDEAKRLSSKIAADFIQQPLPAAIG 62

Query: 70  GRTTTPVS---LSLPFASVGQA--KPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLIS 129
              + P+    LSLPFASV Q   K  ++  LS+D+VAK+L GTSV+TVSN+NNEFVLIS
Sbjct: 63  RSCSLPLHSYHLSLPFASVSQRQEKVAKNTGLSSDYVAKTLTGTSVYTVSNSNNEFVLIS 122

Query: 130 DPNNGAKSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFL 189
           DPN+ AKSIGLLCFR+EDAEAFLAQV+LR+ E+R  AK+VP++LDQVYMLKVEGIAFRFL
Sbjct: 123 DPNS-AKSIGLLCFRQEDAEAFLAQVRLRKGEVRGGAKVVPLTLDQVYMLKVEGIAFRFL 182

Query: 190 PDPVQIKNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRAS 249
           PDPVQIKNA++LKAS+ K+GFDGVPVFQSDLLVVKK+N+RYCPIYFRKEDIEKELS RAS
Sbjct: 183 PDPVQIKNAMELKASDLKTGFDGVPVFQSDLLVVKKRNRRYCPIYFRKEDIEKELSSRAS 242

Query: 250 RGRGPSQNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           RG   SQ+I+VG+LEDVLKKMEI+++NSGW D IFIPPGKSH QHIQ+
Sbjct: 243 RGSSVSQHIMVGTLEDVLKKMEISQRNSGWEDLIFIPPGKSHSQHIQD 289

[Close]

BLAST of Spo04683.1 vs. ExPASy Swiss-Prot
Match: TIC22_ARATH (Protein TIC 22, chloroplastic OS=Arabidopsis thaliana GN=TIC22 PE=1 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 4.400e-87
Identity = 176/273 (64.47%), Postives = 216/273 (79.12%), Query Frame = 1

		  
Query: 17  RPNPLLSVSTFMH----RLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPVSLSLPF 76
           +PNP LS S+F+H    R  ++L+ R+++++R    F  TL  A+ R    TP     PF
Sbjct: 6   KPNPFLSFSSFIHHQCTRFSSDLSARIEDTKR----FAETL--ATRRFSLPTPP----PF 65

Query: 77  ASVGQAKP-LQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRKE 136
           ASV Q+K       LS   VAK+L GTSVFTVSNTNNEFVLISDP  G KSIGLLCFR+E
Sbjct: 66  ASVSQSKSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGG-KSIGLLCFRQE 125

Query: 137 DAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLKASET 196
           DAEAFLAQ +LRRREL++ AK+VPI+LDQVY+LKVEGI+FRFLPDP+QIKNAL+LK+S  
Sbjct: 126 DAEAFLAQARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGN 185

Query: 197 KSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQ--RASRGRGPSQNIVVGSLE 256
           K+GFDGVPVFQS+LLVV+KKN+RYCP+YF KEDIE+ELS+  RASRG    Q I+VGSLE
Sbjct: 186 KNGFDGVPVFQSELLVVRKKNRRYCPVYFSKEDIERELSKYTRASRG---DQQIMVGSLE 245

Query: 257 DVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           DVL+KME++EKNSGW D IFIPPG+S+ QH+Q+
Sbjct: 246 DVLRKMEMSEKNSGWEDVIFIPPGRSYAQHMQD 264

[Close]

BLAST of Spo04683.1 vs. ExPASy Swiss-Prot
Match: TIC22_PEA (Protein TIC 22, chloroplastic OS=Pisum sativum GN=TIC22 PE=1 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.600e-84
Identity = 168/269 (62.45%), Postives = 203/269 (75.46%), Query Frame = 1

		  
Query: 16  GRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPVSLSLPFASV 75
           G+ NPLLS S F++     L TRL+E++RLAG  I                       S 
Sbjct: 5   GQWNPLLSFSRFINHHSNHLATRLEETKRLAGTLIQ----------------------SH 64

Query: 76  GQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRKEDAEA 135
            + KP     L+ +HVAKSL GTSV+TVSN++NEFVL+SD   GAKSIGLLCFR+EDAEA
Sbjct: 65  TRTKPAFAATLTPNHVAKSLAGTSVYTVSNSDNEFVLMSDA-EGAKSIGLLCFRQEDAEA 124

Query: 136 FLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLKASETKSGF 195
           FLAQV+ R++E R  AK+VPI+LDQVYMLKVEGIAFRFLPDPVQIKNAL+L+A+  +  F
Sbjct: 125 FLAQVRSRKKEFRGGAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELRAA-NRGSF 184

Query: 196 DGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQ--RASRGRGPSQNIVVGSLEDVLK 255
           DGVPVFQSDLLVVKKKNKRYCP+YF KED+E ELS+  R+S+G G SQ+I+VGS EDVLK
Sbjct: 185 DGVPVFQSDLLVVKKKNKRYCPVYFSKEDLEYELSKVSRSSKGVGVSQHIMVGSFEDVLK 244

Query: 256 KMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           KME++EK+SGW D +FIPPGK H QH+QE
Sbjct: 245 KMELSEKSSGWEDLVFIPPGKKHSQHMQE 249

[Close]

BLAST of Spo04683.1 vs. ExPASy Swiss-Prot
Match: TI22L_ARATH (Protein TIC 22-like, chloroplastic OS=Arabidopsis thaliana GN=TIC22L PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.800e-32
Identity = 80/196 (40.82%), Postives = 122/196 (62.24%), Query Frame = 1

		  
Query: 86  LSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRKEDAEAFLAQVQLRRR 145
           LS D + + L G  V+ +SN+N EFVL+S  ++G KS+GLL  ++EDAE  L +++    
Sbjct: 110 LSADAIEERLAGVPVYALSNSNEEFVLVSGTSSG-KSLGLLFCKEEDAETLLKEMKSMDP 169

Query: 146 ELRSQ-AKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLK--ASETKSGFDGVPVFQ 205
            +R + +K+V ++L +V+ LKV G+AFR +P+  Q+KNAL  +  A      F GVPVFQ
Sbjct: 170 RMRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDFHGVPVFQ 229

Query: 206 SDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGR--GPS---QNIVVGSLEDVLKKMEI 265
           S  L+++ +N  Y P++FRKED+EK L + +S+     P+    +I V   ED++K M  
Sbjct: 230 SKSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAVFEDIVKGMR- 289

Query: 266 NEKNSGWGDFIFIPPG 274
               S W D +FIPPG
Sbjct: 290 ESTTSNWDDIVFIPPG 303

[Close]

BLAST of Spo04683.1 vs. TAIR (Arabidopsis)
Match: AT4G33350.1 (Tic22-like family protein)

HSP 1 Score: 322.8 bits (826), Expect = 2.500e-88
Identity = 176/273 (64.47%), Postives = 216/273 (79.12%), Query Frame = 1

		  
Query: 17  RPNPLLSVSTFMH----RLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPVSLSLPF 76
           +PNP LS S+F+H    R  ++L+ R+++++R    F  TL  A+ R    TP     PF
Sbjct: 6   KPNPFLSFSSFIHHQCTRFSSDLSARIEDTKR----FAETL--ATRRFSLPTPP----PF 65

Query: 77  ASVGQAKP-LQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRKE 136
           ASV Q+K       LS   VAK+L GTSVFTVSNTNNEFVLISDP  G KSIGLLCFR+E
Sbjct: 66  ASVSQSKSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGG-KSIGLLCFRQE 125

Query: 137 DAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLKASET 196
           DAEAFLAQ +LRRREL++ AK+VPI+LDQVY+LKVEGI+FRFLPDP+QIKNAL+LK+S  
Sbjct: 126 DAEAFLAQARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGN 185

Query: 197 KSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQ--RASRGRGPSQNIVVGSLE 256
           K+GFDGVPVFQS+LLVV+KKN+RYCP+YF KEDIE+ELS+  RASRG    Q I+VGSLE
Sbjct: 186 KNGFDGVPVFQSELLVVRKKNRRYCPVYFSKEDIERELSKYTRASRG---DQQIMVGSLE 245

Query: 257 DVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           DVL+KME++EKNSGW D IFIPPG+S+ QH+Q+
Sbjct: 246 DVLRKMEMSEKNSGWEDVIFIPPGRSYAQHMQD 264

[Close]

BLAST of Spo04683.1 vs. TAIR (Arabidopsis)
Match: AT3G23710.1 (Tic22-like family protein)

HSP 1 Score: 141.4 bits (355), Expect = 1.000e-33
Identity = 80/196 (40.82%), Postives = 122/196 (62.24%), Query Frame = 1

		  
Query: 86  LSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRKEDAEAFLAQVQLRRR 145
           LS D + + L G  V+ +SN+N EFVL+S  ++G KS+GLL  ++EDAE  L +++    
Sbjct: 110 LSADAIEERLAGVPVYALSNSNEEFVLVSGTSSG-KSLGLLFCKEEDAETLLKEMKSMDP 169

Query: 146 ELRSQ-AKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLK--ASETKSGFDGVPVFQ 205
            +R + +K+V ++L +V+ LKV G+AFR +P+  Q+KNAL  +  A      F GVPVFQ
Sbjct: 170 RMRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDFHGVPVFQ 229

Query: 206 SDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGR--GPS---QNIVVGSLEDVLKKMEI 265
           S  L+++ +N  Y P++FRKED+EK L + +S+     P+    +I V   ED++K M  
Sbjct: 230 SKSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAVFEDIVKGMR- 289

Query: 266 NEKNSGWGDFIFIPPG 274
               S W D +FIPPG
Sbjct: 290 ESTTSNWDDIVFIPPG 303

The following BLAST results are available for this feature:

BLAST of Spo04683.1 vs. NCBI nr
BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
BLAST of Spo04683.1 vs. ExPASy Swiss-Prot
BLAST of Spo04683.1 vs. TAIR (Arabidopsis)

BLAST of Spo04683.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902140000\|gb\|KNA04609.1\|	7.1e-154	100.	hypothetical protein SOVF_1981...	[more]
gi\|731346045\|ref\|XP_010684246.1\|	6.0e-121	82.6	PREDICTED: protein TIC 22, chl...	[more]
gi\|747073904\|ref\|XP_011083929.1\|	5.9e-100	71.8	PREDICTED: protein TIC 22, chl...	[more]
gi\|225458599\|ref\|XP_002284687.1\|	1.0e-99	74.4	PREDICTED: protein TIC 22, chl...	[more]
gi\|565376814\|ref\|XP_006354891.1\|	1.9e-98	69.1	PREDICTED: protein TIC 22, chl...	[more]

BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9QBH7_SPIOL	4.9e-154	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BY32_BETVU	4.2e-121	82.6	Uncharacterized protein OS=Bet...	[more]
F6GZZ6_VITVI	7.0e-100	74.4	Putative uncharacterized prote...	[more]
M1ADY4_SOLTU	1.3e-98	69.1	Uncharacterized protein OS=Sol...	[more]
A0A0V0HS19_SOLCH	2.9e-98	69.1	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo04683.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3

Position :

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Match Name	E-value	Identity	Description
TIC22_ARATH	4.4e-87	64.4	Protein TIC 22, chloroplastic ...	[more]
TIC22_PEA	2.6e-84	62.4	Protein TIC 22, chloroplastic ...	[more]
TI22L_ARATH	1.8e-32	40.8	Protein TIC 22-like, chloropla...	[more]

BLAST of Spo04683.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

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Match Name	E-value	Identity	Description
AT4G33350.1	2.5e-88	64.4	Tic22-like family protein	[more]
AT3G23710.1	1.0e-33	40.8	Tic22-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007378	Tic22-like	PFAM	PF04278	Tic22	coord: 21..282 score: 5.6E
None	No IPR available	unknown	Coil	Coil	coord: 130..150 scor
None	No IPR available	PANTHER	PTHR33926	FAMILY NOT NAMED	coord: 17..287 score: 2.3E
None	No IPR available	PANTHER	PTHR33926:SF2	PROTEIN TIC 22, CHLOROPLASTIC	coord: 17..287 score: 2.3E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0006508	proteolysis
biological_process	GO:0006414	translational elongation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0016556	mRNA modification
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0006421	asparaginyl-tRNA aminoacylation
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0001731	formation of translation preinitiation complex
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0016020	membrane
cellular_component	GO:0031972	chloroplast intermembrane space
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004816	asparagine-tRNA ligase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003735	structural constituent of ribosome

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo09139	0.82	Barchart \| Table
Spo20605	0.79	Barchart \| Table
Spo05935	0.79	Barchart \| Table
Spo10863	0.75	Barchart \| Table
Spo24416	0.75	Barchart \| Table
Spo21716	0.75	Barchart \| Table
Spo11333	0.75	Barchart \| Table
Spo06717	0.74	Barchart \| Table
Spo18574	0.74	Barchart \| Table
Spo26994	0.73	Barchart \| Table
Spo01535	0.73	Barchart \| Table
Spo00968	0.73	Barchart \| Table
Spo18201	0.73	Barchart \| Table
Spo24203	0.72	Barchart \| Table
Spo16820	0.72	Barchart \| Table
Spo01513	0.72	Barchart \| Table
Spo27285	0.72	Barchart \| Table
Spo00580	0.71	Barchart \| Table
Spo03626	0.71	Barchart \| Table
Spo15092	0.71	Barchart \| Table
Spo24213	0.71	Barchart \| Table
Spo25304	0.71	Barchart \| Table
Spo05949	0.70	Barchart \| Table
Spo11682	0.70	Barchart \| Table
Spo11336	0.69	Barchart \| Table
Spo15646	0.69	Barchart \| Table
Spo22452	0.69	Barchart \| Table
Spo00918	0.69	Barchart \| Table
Spo23874	0.69	Barchart \| Table
Spo10129	0.69	Barchart \| Table
Spo02518	0.68	Barchart \| Table
Spo02287	0.68	Barchart \| Table
Spo23298	0.68	Barchart \| Table
Spo15207	0.68	Barchart \| Table
Spo21440	0.68	Barchart \| Table
Spo05415	0.68	Barchart \| Table
Spo07853	0.67	Barchart \| Table
Spo00905	0.67	Barchart \| Table
Spo06028	0.67	Barchart \| Table
Spo06005	0.67	Barchart \| Table
Spo10553	0.67	Barchart \| Table
Spo18444	0.66	Barchart \| Table
Spo13906	0.66	Barchart \| Table
Spo06578	0.66	Barchart \| Table
Spo18143	0.66	Barchart \| Table
Spo15641	0.66	Barchart \| Table
Spo00754	0.66	Barchart \| Table
Spo25340	0.66	Barchart \| Table
Spo17244	0.65	Barchart \| Table
Spo27040	0.65	Barchart \| Table
Spo24874	0.65	Barchart \| Table