Spo04689 (gene)

Overview
NameSpo04689
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 30854456 .. 30854662 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATACTTCATTCACTTTATTGCATTTTGCTTCCTTAATTTCATTTTTAGGTAAAAGATGTCGCGACAATACTCCATTGGAAGCTCTTTTAAGTTACATGCATAGAGATGGATTTGAAGCAAAGATGGGCAATGGTTATATCTTATCTACCATGTTGGCCTTTCATTCCGATTCTCGTTTTCAATGCAGCGGTTCTAAATAA

mRNA sequence

ATGGAAGATACTTCATTCACTTTATTGCATTTTGCTTCCTTAATTTCATTTTTAGGTAAAAGATGTCGCGACAATACTCCATTGGAAGCTCTTTTAAGTTACATGCATAGAGATGGATTTGAAGCAAAGATGGGCAATGGTTATATCTTATCTACCATGTTGGCCTTTCATTCCGATTCTCGTTTTCAATGCAGCGGTTCTAAATAA

Coding sequence (CDS)

ATGGAAGATACTTCATTCACTTTATTGCATTTTGCTTCCTTAATTTCATTTTTAGGTAAAAGATGTCGCGACAATACTCCATTGGAAGCTCTTTTAAGTTACATGCATAGAGATGGATTTGAAGCAAAGATGGGCAATGGTTATATCTTATCTACCATGTTGGCCTTTCATTCCGATTCTCGTTTTCAATGCAGCGGTTCTAAATAA

Protein sequence

MEDTSFTLLHFASLISFLGKRCRDNTPLEALLSYMHRDGFEAKMGNGYILSTMLAFHSDSRFQCSGSK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04689.1Spo04689.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo04689.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04689.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04689.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04689.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019260 1,2-dichloroethane catabolic process
biological_process GO:0018888 3-chloroacrylic acid metabolic process
biological_process GO:0016556 mRNA modification
cellular_component GO:0009507 chloroplast
molecular_function GO:0018786 haloalkane dehalogenase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo046900.72Barchart | Table
Spo021730.69Barchart | Table
Spo249720.66Barchart | Table