Spo04741 (gene) | SpinachBase

Overview


Name	Spo04741
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16
Location	chr2 : 19847784 .. 19855021 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTATATACCTAGGTCGATCAGTCGATGTAAGTTTACCTGAAATCCGAGCAAATATAGATTTTGTAATCGTTTATGTAGCTCGGAAGGTATGGTCAAAATAAATGCTCCAACTCAACCAAATTACACATCATTGCTCTGCTGTGGGCAGTATCAATACAACGGTTTTGACAATGAAAAGCCATGATATGTGATTATGTGCTACTTTCAATGCCTTTTATTCTCCTCATTTTTTCTAGCTACTCTTCTCATCTTCTCCTTGCACACTTCATATTTCAATGGAGCTCAAGTACTCTATGATATTCTCTATTTTGATATTCCACCTCTTGCTATCGCCTTACACCCTTTCAGGTACGGACTATGTTACTTGAAACCGCTTTTTGTGGTTTTTATATTTTGATTTTATTTTGTAAAAAACAGAAAACAAAATTAAACAAAAACACCGATATCGAAGGGACTTTTAGTTGGTAATTATAATATCTTTAACAATGGTATCCAATTAAGATTCAATCTCGTCTGCATCATTGTATTTTGTTACACTTATACAATTGATGTACTATTAGTCACTTGATTAATTCATGATCTTTGAGGATCTCTCCTCGTTGTTATAGTACTACGTATTATATATTATTGCTAATTTTTTGTTACGTATGATATTTAGGGGGAAAAGAAATTTCTAAATTGAACGATGAAGATGTATATGAGATTGATTATAGAGGTCCGGAGACACATTCTCACCTTCCACCTCCAAAGCGATTGAAAAGAAATCCTTACATACATCACAAAGTTGTGACAAAATCTAAGCAACGAGCTGCCAACATTATTACGAAAATGGTAAGACACTCTAGCTTTTCAAGCTTTCATGCTTACACGTTATGTTTTGCGAATAATGGCAGATCTTGAAAAAAAATGAGGGGTTACAATTTGAAAGTCCAACCTCTTTAGAATTAAGCTCACTCAAGCAGGGTCAAAAATCAATGTCACAACATTTTATATGTACATTTTAAAATTAAGTCTTGAACAAGATTTTGTGAACCGTAATTGTTACTAGACTTGTCAAAAATTAACACAATTGTTACTAGACTTGTCAAAAATCGACCGGATTCGAAAATCGATCCGAAATTGACCTAAAATTAGTGAGTCTTGAACAAGATTTTGTGAACCGTAATTGGATTTTATCCGAACCTGAACACCCTTTAAAGTATTGGTCAAAACCAGGTCGAACATGTTTTTTTTACCCAACTGATTGAAAATTGTTGTATTTATAGTAATAAACGAGATTATAAGAAATTTTAAGCGCAATAAACACGTTGTTGTTACTATTGTTGGGTGTAATATGATTTTGATTTGAATTAGACGTCATTTTATGATTTAATTTGACTAAACATAAACTTGTGTATGGAATTTTGTTAATTTGTGCGCATATTTTTTATATTTATTACACAAATTAATGAAAATACATTACACGTTTTAAAATCTCTCAAGTCTCAACTCATTGGGTCGACCCGAACCGAAAGTTTTGGTCTTGAATAAGCATTTATAAACCTAAACCCGAAAATAATTTTCTATAACCCGATCGAACGATCTATTTAACAGGTCTAGTTGCTACTAGTGGTATACAAATTGGGTAATTTATCACTCGAGTGCCAAAATCACCTATCAATACAACTCAAAAAATCATGGTTAATTAAATTGATTCAATCACTTCCCTTGTGACCTTAAGGGGTTGATTCATGTCTCACAAGTCACAAGGGGAATTTTGAAGTGTGATTCCCGTAAACTCCTCGGTTACCTAACCACCCACCCTAAAGGTGCGTATACGGTAGAGCTGTCAAAAACTGACCCAATCCGAGAAACCGATGTGAACCGACCTGTATTTTTAAGGACCCGAACCCGACCCGATACTCGAAATTTTGTTAAAATAGGAAACCCGTAACCCGACCGTATCCAACCCGTTAAAACCGGCGACCGATTTTGACCCGTTAATGCATGACCCGGACCCGAACCTGATACCCGATCGAAATATAACCGATAACAAAACTAAGTCAGCTTACCCGACCGAAAAATGATCCGAACCGATTCAACACCCGACCCGTTGTCAACCCGAAACCGATTATAACCCGATGAAACTTGTTATTGACTCAATTCGTGACAACCTGTTACCTGAATTTACGCGTCATGTTGACAACCAGATTTGTCATTGACCTAACTAAACAATAACTTAAATCAAGTTAATATTATGTTTTATAATTACATAATATAGAAAGTGAAAAGCGTTAAACCAAATTTATAAAAGTTAATTATAAGGTTAAAACTTGACTAATCCTGATAGCTATCGTACCCTGTCTTAACCAGTGTCCGATAGTGAACCCGACCTGAATTTTAACCGACCCGGTAATTATCCGATCCGAACTTGACCCGACTCGTTATGACCCGAACTCGTAATTGTACCCGACAAGAAAAAGACCCGACCCGAACCCGACCTATACCGAAATGGAAAAATAACCTGATATGACACGACAAATTTTCAACCTGATCGAACCCGACCTGAACCCGACCTGCGCCCGGTGATAAAATGACCCGACACGACCCGACCAGATCATGACCCGAGATCCGAGATGACCAGACCCGAACCCAACTCGAGTAACCGTTTTGACAACTCTAGTATATGGTACAATATGATAGGGTCATGCCATGGCTCAAACATAATTCCGTGATGCACCTCATGCACCAACTTATTAATTGTTCACTCTTATTTTTAGAGCACGATAACCTTGATCTGCGATGACAATAAATCTTCGCTTTAGCGACTACATACCTTACAGCCTTTTTTCGTGTCAAAAAAGAACTCGTTATTCTTCCTTACTCAGATTTCATACTTGTCGTATACTTTTGATACTAAGATAGAAGTTGAAATCTGAGGTCCAGGGCTTAAGAATTAGAGGAGATGTGCGTAAGAAAAAAAGTGAATAGGGTAAGATAAATATATTGCATAGTAAAAGACAATTTTGCATATGTTAAAATCACCCGCGTATTTTACATAAAAGACAATTTTGTCCTTATATAATTTTATCCATAATAATATCCATAATAATAATAATAATATTAATAATTGAAATTTTAAAAATAATTTTTCTTCGGCAGTTTAAACGATTAAATATTAAATCATATTTTTTTCGGAAAACACACTGCCGCCCCAAAAAGGCGGCCTAACCATGGTACAGTCGCCCACAATTGGCGACGGGGGCCATGGCTAAGCCGTGCATCTTGCGCGGCTAAGCCATGGTCGCCGCCGCCACCAATTGTGGGCGGTTGGACCATGGTTAGGCCGCCTCTTTCGAGCGGCACATGTTTTTCATAAAAAATTAATAATTTATGTTCTTTAACACCATCACTCACTCCCTCTCTTCTCCGCGACGGCTCCATCCCAACAACAACCACGAATTACCGCGCTGCGACGATGCTATATCTGCCACCTTCACGCCGCACCTCCCCCTTGCGTTGGGCCGACCAACAGCCACGTCCCAACTCCAAAAAAGGGTTGCCGCCCAGAATTGGCGGCCCTGACTATGGCTAAGCCGCTTTTTCTGGGCGGTATAGCCATAGTCGGGGCCGCCAATTCTAGGCGGCACCCTTTTTTAACAAAATAAAAAAAAATCGAACGTACTAACGCAGCGATGGCGCATGCGGAAGAATGGGCGGAGGTGGCGCGTCTTTGTTTCCGGTTGTATGCTCCTCCTCTTCTCCTCCTCTAATCGGTGTGAAAGAATGATTTGGCGTGATTATTATCATAATTGTTGGCTACAATTTAGGGATTCTAATGTCTAAATAATGTAACGTATACTAACCATATATACAAAATCTTTGACTAAAAATATTAACCATATATATTTACATAGTCTATTACGGTTAAAAGAAAATTTTGGATCAAAAATAACAGAGCAAATGAGGGGGGAGGGCGGGTTCGGGAAAACCAGGCGGCGTGGTGGGGGTTATGCCAGAGGCCGCGACGGCAAGACTTGGCCAGAGCAACGAGTTCTGGAAGGGGGTTTTTGATTTTTTTTTTAAAGGGCAATATCTTACTTTTACCATAAATACGCAGGCATTTTTAGCGAACGAGGACGTCGAATAAAAACCCCCTAAAAATATGAATGTAAGAAAATAAAAATGAATAAACTAAGAGAGATTGAGTAAAATGTGTATGTACCGACAAGTCTAGTGATATAAAATGTCTTAACAAAATAGAATAAAGTAGACATTGAAACATCTAATAAAAACATCACGCATTGAAAAGTGAATACTAATTAAAAAAAAACATGTGAGTATTTTTAAATAATATATATTTTTTCCTCCACCGACATTTGTATTATTTTCTTTGGTAAGAAAGCATTTTATTTTGGAACATAAACATTTACGAAAGGAGTCATTGAGAATAGGGTTGTCAAAAACATACTTCGTGCGACAGCCTACAGACATCCGATAAAAGCTGAAGTGACCCAAAAAAAATATTCACACACTCAATCCATATCAGCACAATGTCTCCACACAAAATAATATCCGATCATACTCGACCTGCAACCGTTCGATAACCCTATTTGACAACCTTATATTTGAAAACTATAGAATGTAATCCACTCCATTTCATATATAAAGTACTCCACTCCATTTTCAAATGGTAGTCTCGTTTTGGGTCATAGGCTCAGTACTCTTAACCTTACTCTTATTGACTATTACATATTGTTCTTAAGTTAGACTAGACGTGAAAAATCCGAACCCTATAGGACTAGACTAAACTAGAAAACACTATCATAAATCATTCAAACCATACCATACTAGAAAAATTTGTATCAGAAAAAATCAGACCAATCCAGACTAGAAACTAAAATTAGACCAGATCACATTAAGAGAACAGACCTTAGAAAATTCATTCTAAAGTTACTTCTCAAAGAATCTCATAAGAATCTTAATATATGTTCATTCGTGAGGGAAGGAGAGATAAAAGATTAAGGCCACAAGAATTTTTTTTTGAGGCGGAATTGGAATAGTAATTTTGATATGAGGGTATAAAATAGATAAATAATGACAAACACAAAAAAAATACCAAATAGGACTAATGTAAAAAAACAAGGAAAATATTATGGGAATAAGTCAACCTTTGACCGTCTGCAAAAAGTAAGCGTACCTTTTGATTATATCTGAATAAGTCAACCTTTATACCCAACCAATTTAAACATTCACATGACCGGTGACTTGTTTTAGTTTCGATCAATAGGTTAATTTTGTTTTTGTTTTTTGTTACTTTTTTTAAGATGATTTTTTTTGTTAACTTTTTAAAGATATTTTTTCATATGTTTTTTGATTCATGAGTTTTGAGGTTGATATTTAACACGTGTTTCAATGAACATTTTTTGAGATAATTTTTTAATACATTGTATGACAATTTTTTCAATGCAATTGTTTGACACGCTTTTCAAAAGAATATTCGGCATGTTTTGTGTGCGAAGTTCTTATACGCTTTTAAGATGTATTTTTTACACACTTTACGAGGTAATAAAACATGAAACAAAAAACACCTTAGTAACTAAACATGAAAATAAAAAATCAAAATAATTGGAGATTAGGTAGAAAATTAAATACAACCTTAAACACGAAGCGATAATTCAACCGTTAGCGATCAAGGTTGGGATGACAGGGAAAACGTGTTAAATTTTGGGACGATCAGAGTAATATTGGCCTTACAATTTCATATCTTTCATTTTCAAACTCGGTTTTTTGATAATCGACTCCAATCTCAATTTATTTGGATATTCATTTTAGTTAATATTTTATTTTCAAGTTGAATTTTTTGTTTTGTTACCTCGAACGCGCTATAAAGCTTCCTTGAAAAACTTGTCAAAAAGTCATCTTGAAAAATGTGTCAAACGTATCTTGAAAAGCGCACGGATTTTTTTTTTCAAAAATCCATATTTAATACTCCCCTCGAGCGCGTCAAAAAAGCTCATCGAAAAACGGGCTCAAATTGATTATTTTTAAGAAAAAAACAAAAGTTGAAAATTTGGTAATTAGAGCATGGGCATTGGTGGGAGGAAAGGACTTGCTAGAAAATAGTAAAGAGTTAGAGCTACAAGCTCAACCGTTGTGGAAGAATGAAGTTTGTAGCTCTATAAAACCTTGTAGTTTTGTGGAGCTAGCTAGTAGTTTGGTGTTTGTTGTTGGGAAAAACAACTCATTATCCTCTCAATTGTACTACACAGATGGTGTAGATGGGAACGTGGGGTTCACTTGTCATTTTGTTGTTGTAATGATATTTGGGCCCCACCATACATCATTATGGATCTGCAAAATCTACAATTATGAGTGGTTTCCATTAGAGAGGTTGTAGCTTAAAATTGGGTTTTGGCTTGGAAATGATGTGGCAAAATAAAGCAACAACCTTTGTTGCAAGCCATTGCTCATGCTCTTACCTGTCATATTATCAACTCACCTTCTATAACAGGTCAAAATAAAAAGTGATTTGTTTAAAATTGATGTGGTGTAAAAGTTGATTTATCTTGATATAATCGAAAGACTAATTTATTTTTGCGAACGGTCTAAAAGTTGACTTATTTCAATTAATTTTTCCAGAAACAATTAAGACCTAATATTCAAAATAAAGAGAGTAACATAATTCAATTGCAATCTCTTTTCTATTTTGTAGGGAAAGTAAATTGCAAATTTGGATGGAAAGGAAAAAAGAGTTCTTCTGCAAGGAAAAAAGAATGCTCCATATTTATTTCACTATTGATGCAATAGTGTTTTTGGAATGTAACACATTACTTGTATTTAAATTCAAATCTTGTTATACATACTACAATGTTTTCTAATCTTATAGTTCCTTTTTTATATAGATCTTGTGATTCATAATATATTGTATGTTTGAGAAATTAATGATCTTGTATATTTCTCACACATTAAAAAAATTATCCTTTTCCGTTCCTTTTTTATTGTATTATTTTACTACTACCATCAAAATGGTGCAATTAAAAGGAAAAGTAGGCTTTTTTTTGAAGTAAGCATGAGTGGCACTTAATTAACATTGCTTAAACCAACAATGGTCAACTAAACAAAAGCATCAGAGGGAAGGGTATCACCACGTAGCCTCCATCCATGCACCCATGGCATACAATGTGCAAGCTCATGAGCGACGCCCAGGCCCGGTCCCTGACATTTTATGGGCTCGGGGCAAAATAAAAGATCAGG

mRNA sequence

TTGTATATACCTAGGTCGATCAGTCGATGTAAGTTTACCTGAAATCCGAGCAAATATAGATTTTGTAATCGTTTATGTAGCTCGGAAGGTATGGTCAAAATAAATGCTCCAACTCAACCAAATTACACATCATTGCTCTGCTGTGGGCAGTATCAATACAACGGTTTTGACAATGAAAAGCCATGATATGTGATTATGTGCTACTTTCAATGCCTTTTATTCTCCTCATTTTTTCTAGCTACTCTTCTCATCTTCTCCTTGCACACTTCATATTTCAATGGAGCTCAAGTACTCTATGATATTCTCTATTTTGATATTCCACCTCTTGCTATCGCCTTACACCCTTTCAGGGGGAAAAGAAATTTCTAAATTGAACGATGAAGATGTATATGAGATTGATTATAGAGGTCCGGAGACACATTCTCACCTTCCACCTCCAAAGCGATTGAAAAGAAATCCTTACATACATCACAAAGTTGTGACAAAATCTAAGCAACGAGCTGCCAACATTATTACGAAAATGGGAAAGTAAATTGCAAATTTGGATGGAAAGGAAAAAAGAGTTCTTCTGCAAGGAAAAAAGAATGCTCCATATTTATTTCACTATTGATGCAATAGTGTTTTTGGAATGTAACACATTACTTGTATTTAAATTCAAATCTTGTTATACATACTACAATGTTTTCTAATCTTATAGTTCCTTTTTTATATAGATCTTGTGATTCATAATATATTGTATGTTTGAGAAATTAATGATCTTGTATATTTCTCACACATTAAAAAAATTATCCTTTTCCGTTCCTTTTTTATTGTATTATTTTACTACTACCATCAAAATGGTGCAATTAAAAGGAAAAGTAGGCTTTTTTTTGAAGTAAGCATGAGTGGCACTTAATTAACATTGCTTAAACCAACAATGGTCAACTAAACAAAAGCATCAGAGGGAAGGGTATCACCACGTAGCCTCCATCCATGCACCCATGGCATACAATGTGCAAGCTCATGAGCGACGCCCAGGCCCGGTCCCTGACATTTTATGGGCTCGGGGCAAAATAAAAGATCAGG

Coding sequence (CDS)

ATGGAGCTCAAGTACTCTATGATATTCTCTATTTTGATATTCCACCTCTTGCTATCGCCTTACACCCTTTCAGGGGGAAAAGAAATTTCTAAATTGAACGATGAAGATGTATATGAGATTGATTATAGAGGTCCGGAGACACATTCTCACCTTCCACCTCCAAAGCGATTGAAAAGAAATCCTTACATACATCACAAAGTTGTGACAAAATCTAAGCAACGAGCTGCCAACATTATTACGAAAATGGGAAAGTAA

Protein sequence

MELKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSHLPPPKRLKRNPYIHHKVVTKSKQRAANIITKMGK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04741.1	Spo04741.1	mRNA

Homology

[Close]

BLAST of Spo04741.1 vs. NCBI nr
Match: gi|902176640|gb|KNA08806.1| (hypothetical protein SOVF_159390, partial [Spinacia oleracea])

HSP 1 Score: 170.2 bits (430), Expect = 1.500e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1

		  
Query: 1  MELKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSHLPPPKRLKRN 60
          MELKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSHLPPPKRLKRN
Sbjct: 14 MELKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSHLPPPKRLKRN 73

Query: 61 PYIHHKVVTKSKQRAANIITKMGK 85
          PYIHHKVVTKSKQRAANIITKMGK
Sbjct: 74 PYIHHKVVTKSKQRAANIITKMGK 97

[Close]

BLAST of Spo04741.1 vs. NCBI nr
Match: gi|731368950|ref|XP_010696402.1| (PREDICTED: uncharacterized protein LOC104908930 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 117.5 bits (293), Expect = 1.100e-23
Identity = 59/85 (69.41%), Postives = 67/85 (78.82%), Query Frame = 1

		  
Query: 1  MELKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSHLPPPKRLKRN 60
          MELKYS +F+ILIF+LL++PY  SG   I  LNDEDVYEIDYRGPETHS LPPP R+KR 
Sbjct: 1  MELKYSCVFAILIFYLLVTPYIFSGTAAIRNLNDEDVYEIDYRGPETHSRLPPPDRMKRG 60

Query: 61 -PYIHHKVVTKSKQRAANIITKMGK 85
           PYIHHK VTK +QR AN+I K  K
Sbjct: 61 PPYIHHKAVTKFEQRPANMIRKHAK 85

[Close]

BLAST of Spo04741.1 vs. NCBI nr
Match: gi|731368953|ref|XP_010696403.1| (PREDICTED: uncharacterized protein LOC104908930 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 110.9 bits (276), Expect = 1.100e-21
Identity = 58/85 (68.24%), Postives = 66/85 (77.65%), Query Frame = 1

		  
Query: 1  MELKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSHLPPPKRLKRN 60
          MELKYS +F+ILIF+LL++PY  S    I  LNDEDVYEIDYRGPETHS LPPP R+KR 
Sbjct: 1  MELKYSCVFAILIFYLLVTPYIFSA---IRNLNDEDVYEIDYRGPETHSRLPPPDRMKRG 60

Query: 61 -PYIHHKVVTKSKQRAANIITKMGK 85
           PYIHHK VTK +QR AN+I K  K
Sbjct: 61 PPYIHHKAVTKFEQRPANMIRKHAK 82

[Close]

BLAST of Spo04741.1 vs. NCBI nr
Match: gi|224138630|ref|XP_002322862.1| (hypothetical protein POPTR_0016s08840g [Populus trichocarpa])

HSP 1 Score: 62.4 bits (150), Expect = 4.400e-7
Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 1

		  
Query: 1  MELKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSH-LPPPKRLKR 60
          MELK S+    L+F LL++P+   GG E++   D +VYEIDYRGPETHS  +PPP     
Sbjct: 1  MELKSSISTVFLLFLLLVTPHISRGGSEVA---DSEVYEIDYRGPETHSSVMPPPGHFHG 60

Query: 61 NPYIHHKVVTKS 72
           P+IH   V  S
Sbjct: 61 RPWIHQDTVKTS 69

[Close]

BLAST of Spo04741.1 vs. NCBI nr
Match: gi|719992451|ref|XP_010253574.1| (PREDICTED: uncharacterized protein LOC104594796 [Nelumbo nucifera])

HSP 1 Score: 62.4 bits (150), Expect = 4.400e-7
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 1

		  
Query: 1  MELKYSMIF-SILIFHLLLSPYTLSGGKEISKLN--DEDVYEIDYRGPETHSHLPPPKRL 60
          MELK S  F ++L+  +LL+   LS G   + +   D +VYEIDYRGPETHS+ PPPKR 
Sbjct: 2  MELKTSAAFITLLLLSILLARSNLSEGGSDATVTGLDREVYEIDYRGPETHSYNPPPKRS 61

Query: 61 KRNPYIHH 66
             P+IHH
Sbjct: 62 GGRPFIHH 69

[Close]

BLAST of Spo04741.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQJ1_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_159390 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.000e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1

		  
Query: 1  MELKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSHLPPPKRLKRN 60
          MELKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSHLPPPKRLKRN
Sbjct: 14 MELKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSHLPPPKRLKRN 73

Query: 61 PYIHHKVVTKSKQRAANIITKMGK 85
          PYIHHKVVTKSKQRAANIITKMGK
Sbjct: 74 PYIHHKVVTKSKQRAANIITKMGK 97

[Close]

BLAST of Spo04741.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E1J0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g179830 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 8.000e-24
Identity = 59/85 (69.41%), Postives = 67/85 (78.82%), Query Frame = 1

		  
Query: 1  MELKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSHLPPPKRLKRN 60
          MELKYS +F+ILIF+LL++PY  SG   I  LNDEDVYEIDYRGPETHS LPPP R+KR 
Sbjct: 1  MELKYSCVFAILIFYLLVTPYIFSGTAAIRNLNDEDVYEIDYRGPETHSRLPPPDRMKRG 60

Query: 61 -PYIHHKVVTKSKQRAANIITKMGK 85
           PYIHHK VTK +QR AN+I K  K
Sbjct: 61 PPYIHHKAVTKFEQRPANMIRKHAK 85

[Close]

BLAST of Spo04741.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B7J6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g179830 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.500e-22
Identity = 58/85 (68.24%), Postives = 66/85 (77.65%), Query Frame = 1

		  
Query: 1  MELKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSHLPPPKRLKRN 60
          MELKYS +F+ILIF+LL++PY  S    I  LNDEDVYEIDYRGPETHS LPPP R+KR 
Sbjct: 1  MELKYSCVFAILIFYLLVTPYIFSA---IRNLNDEDVYEIDYRGPETHSRLPPPDRMKRG 60

Query: 61 -PYIHHKVVTKSKQRAANIITKMGK 85
           PYIHHK VTK +QR AN+I K  K
Sbjct: 61 PPYIHHKAVTKFEQRPANMIRKHAK 82

[Close]

BLAST of Spo04741.1 vs. UniProtKB/TrEMBL
Match: M0ZNC4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001743 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.800e-7
Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 1

		  
Query: 1  MELKYSMIFSILIFHLLLSPYTLSGGK-EISKLNDEDVYEIDYRGPETHSHLPPPKRLKR 60
          MELK+S I   L+  L+   ++ S GK ++SK++  ++YEIDYRGPETH+++PPP+  + 
Sbjct: 1  MELKFSFIVIFLLLLLVSPSFSSSSGKMDLSKVDTSEIYEIDYRGPETHTNIPPPRGGRH 60

Query: 61 NPY-----IHHKVVTKSKQRAAN 78
          N +      HHK +   K    N
Sbjct: 61 NSHHQGMLFHHKPIKPGKNGKKN 83

[Close]

BLAST of Spo04741.1 vs. UniProtKB/TrEMBL
Match: B9IJ14_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s08840g PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.100e-7
Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 1

		  
Query: 1  MELKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSH-LPPPKRLKR 60
          MELK S+    L+F LL++P+   GG E++   D +VYEIDYRGPETHS  +PPP     
Sbjct: 1  MELKSSISTVFLLFLLLVTPHISRGGSEVA---DSEVYEIDYRGPETHSSVMPPPGHFHG 60

Query: 61 NPYIHHKVVTKS 72
           P+IH   V  S
Sbjct: 61 RPWIHQDTVKTS 69

[Close]

BLAST of Spo04741.1 vs. TAIR (Arabidopsis)
Match: AT5G03120.1 (unknown protein)

HSP 1 Score: 53.1 bits (126), Expect = 9.400e-8
Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = 1

		  
Query: 3  LKYSMIFSILIFHLLLSPYTLSGGKEISKLNDEDVYEIDYRGPETHSHLPPPKRLK-RNP 62
          +K +++   LI +LL++    + G E +   D +VYEIDYRGPETH+  PPP+ +  + P
Sbjct: 1  MKSTVMMIFLIIYLLIAVPCFAKGSEQT---DSEVYEIDYRGPETHNSRPPPETMHGKPP 60

Query: 63 YIHH 66
          YIHH
Sbjct: 61 YIHH 61

The following BLAST results are available for this feature:

BLAST of Spo04741.1 vs. NCBI nr
BLAST of Spo04741.1 vs. UniProtKB/TrEMBL
BLAST of Spo04741.1 vs. ExPASy Swiss-Prot
BLAST of Spo04741.1 vs. TAIR (Arabidopsis)

BLAST of Spo04741.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902176640\|gb\|KNA08806.1\|	1.5e-39	100.	hypothetical protein SOVF_1593...	[more]
gi\|731368950\|ref\|XP_010696402.1\|	1.1e-23	69.4	PREDICTED: uncharacterized pro...	[more]
gi\|731368953\|ref\|XP_010696403.1\|	1.1e-21	68.2	PREDICTED: uncharacterized pro...	[more]
gi\|224138630\|ref\|XP_002322862.1\|	4.4e-7	48.6	hypothetical protein POPTR_001...	[more]
gi\|719992451\|ref\|XP_010253574.1\|	4.4e-7	51.4	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo04741.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QQJ1_SPIOL	1.0e-39	100.	Uncharacterized protein (Fragm...	[more]
A0A0J8E1J0_BETVU	8.0e-24	69.4	Uncharacterized protein OS=Bet...	[more]
A0A0J8B7J6_BETVU	7.5e-22	68.2	Uncharacterized protein OS=Bet...	[more]
M0ZNC4_SOLTU	1.8e-7	39.7	Uncharacterized protein OS=Sol...	[more]
B9IJ14_POPTR	3.1e-7	48.6	Uncharacterized protein OS=Pop...	[more]

BLAST of Spo04741.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo04741.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G03120.1	9.4e-8	43.7	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009409	response to cold
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0009697	salicylic acid biosynthetic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006508	proteolysis
biological_process	GO:0009555	pollen development
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0015979	photosynthesis
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0010051	xylem and phloem pattern formation
biological_process	GO:0009616	virus induced gene silencing
biological_process	GO:0010050	vegetative phase change
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0048439	flower morphogenesis
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0009887	animal organ morphogenesis
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009850	auxin metabolic process
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048438	floral whorl development
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0048519	negative regulation of biological process
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000785	chromatin
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005795	Golgi stack
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0004683	calmodulin-dependent protein kinase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003924	GTPase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo25659	0.76	Barchart \| Table
Spo19217	0.75	Barchart \| Table
Spo21635	0.75	Barchart \| Table
Spo01235	0.75	Barchart \| Table
Spo02480	0.74	Barchart \| Table
Spo06335	0.74	Barchart \| Table
Spo00283	0.74	Barchart \| Table
Spo18778	0.74	Barchart \| Table
Spo11509	0.73	Barchart \| Table
Spo26013	0.72	Barchart \| Table
Spo07236	0.72	Barchart \| Table
Spo10864	0.72	Barchart \| Table
Spo23382	0.72	Barchart \| Table
Spo00748	0.72	Barchart \| Table
Spo12354	0.71	Barchart \| Table
Spo08205	0.71	Barchart \| Table
Spo17344	0.71	Barchart \| Table
Spo05307	0.71	Barchart \| Table
Spo18383	0.70	Barchart \| Table
Spo11524	0.70	Barchart \| Table
Spo22436	0.70	Barchart \| Table
Spo18106	0.70	Barchart \| Table
Spo08114	0.70	Barchart \| Table
Spo07514	0.69	Barchart \| Table
Spo08325	0.69	Barchart \| Table
Spo07804	0.69	Barchart \| Table
Spo03281	0.69	Barchart \| Table
Spo13171	0.69	Barchart \| Table
Spo23286	0.68	Barchart \| Table
Spo00677	0.68	Barchart \| Table
Spo05402	0.68	Barchart \| Table
Spo05657	0.68	Barchart \| Table
Spo08494	0.68	Barchart \| Table
Spo08997	0.68	Barchart \| Table
Spo10737	0.68	Barchart \| Table
Spo11431	0.68	Barchart \| Table
Spo12130	0.68	Barchart \| Table
Spo13783	0.68	Barchart \| Table
Spo14096	0.68	Barchart \| Table
Spo14914	0.68	Barchart \| Table
Spo19850	0.68	Barchart \| Table
Spo26355	0.68	Barchart \| Table
Spo26610	0.68	Barchart \| Table
Spo28265	0.67	Barchart \| Table
Spo04201	0.67	Barchart \| Table
Spo00966	0.67	Barchart \| Table
Spo15149	0.67	Barchart \| Table
Spo03184	0.67	Barchart \| Table
Spo09387	0.67	Barchart \| Table
Spo15499	0.67	Barchart \| Table
Spo07685	0.67	Barchart \| Table
Spo01686	0.67	Barchart \| Table
Spo04941	0.67	Barchart \| Table
Spo20770	0.67	Barchart \| Table
Spo20912	0.67	Barchart \| Table
Spo14212	0.67	Barchart \| Table
Spo01925	0.66	Barchart \| Table
Spo12945	0.66	Barchart \| Table
Spo13313	0.66	Barchart \| Table
Spo13499	0.66	Barchart \| Table
Spo13583	0.66	Barchart \| Table
Spo00667	0.66	Barchart \| Table
Spo14074	0.66	Barchart \| Table
Spo16186	0.66	Barchart \| Table
Spo17497	0.66	Barchart \| Table
Spo17940	0.66	Barchart \| Table
Spo18589	0.66	Barchart \| Table
Spo19246	0.66	Barchart \| Table
Spo26678	0.66	Barchart \| Table
Spo20174	0.66	Barchart \| Table
Spo01256	0.66	Barchart \| Table
Spo09381	0.66	Barchart \| Table
Spo08516	0.66	Barchart \| Table
Spo12659	0.66	Barchart \| Table
Spo07245	0.66	Barchart \| Table
Spo02573	0.65	Barchart \| Table
Spo25171	0.65	Barchart \| Table
Spo04142	0.65	Barchart \| Table
Spo22120	0.65	Barchart \| Table
Spo19877	0.65	Barchart \| Table
Spo00080	0.65	Barchart \| Table
Spo26899	0.65	Barchart \| Table
Spo24331	0.65	Barchart \| Table