Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTTTTCCTTTCTCCCCCCCCCCAAAAAAGCGCATTAACATCAGTTCTCCTACCGTCGTTAATCAAAAGGGCGGAAACCATGAAATTCACAAACTCACCGGTGATCGAACTCGTCGTCAACAACAACACACTCTCTCTCCAACAGGACAACAAAACCATGCACGTCGGCACCTCCGTGTGGCCCGGTTCCATTGTTCTTGTCAAATTTGCCGATCACTGGTCTTCCTTAAACCCTAAAACCCCAAACCCTAACCCTTACTCCGACCTCCTCAACTTCAGCGGCAAACGCGGCGTCGAACTTGGTACAGGCTGCGGCGTCGCCGGTATGGGCCTCTACCTATTGGGCCTAACCGACGTTTACCTCACCGACATTGCCGCTGTTATGCCAGCTTTAAAGCATAACCTGAAGAAGAATAAGCCAGTATTGAAGAAATCCTTGAAGATTGCCCAGTTGTATTGGGCTAATTCTGTCCAAATTAAGGCTCTTTCACCGCCCTTTGATGTTGTGATTGCTGCTGATGTGGTGTATTTGGAGGAGACAGTGAGGCCATTGGTTGAAACTATGGTGAAAATGGTGGCAGAGGACGGTGTGGTATTGCTTGGGTATCAGTTACGGTCGCCGGAAGCTGATAAATTGTTTTGGGAAGTTTCCGGGGAGGTTTTCAAAATTGAGAAGGTGCCGCATGAAGATTTGCATCCTGAGTATAATTATGAAGAGACTGATGTTTATATTTTCAGGAAAAAGAAGAATTTGATTGAGTAAGATACCGAACACCTTTGTTTTTCTTATCAATGCTTATTTATGTTAAAATTTTAAATTTGGGTGTTCCTGCGATTAGTTAATTTGAAGGAATTTTGGATTATTTTCAGAGCTCTTTGATTTGATGGGTGGTATTTGATAAATTTGGTTGTGTAATTGCATGCTAGTATTTAGTGTTGTGTGAAGATTGATGTATTGGCAAATGTCAATCGTAGAGTATTGTCTTATCGGAGATGAGAGAAGGTTAAGTGTCTTTTACTGTTGGATTGCAAGGTGGTTTTGCGATGGTTGCTGTTGGTCTGAATATGGAGTGACCACTTGTTGTTTTAAAGATTTGGAGGAATGTATTTAGTCCAGAACTGTATCACAGAATAGAGACTACGGAATATGCTTTTATTTAATTTTATACTTACAGAAAATTCACTAAAGAGTATCTGTACAAAGAGAGAAAAACTTTGCTGTATTTCTGATACATTACATGAGCATATCTATGTGAGCTCTTGAAGCAGCTTTTGGTTTAGAGGTGGCTTTGCGTCATCAAGTCAATCAGAGTTCTATGTTGGGTTCCAAAGGGTTAACTTGCTGCTACCATTCATCTTATTTTGTTAAACAAGAGAAATACAGGTTTATTTAGCTGTGAGAGGCCATTGTAATCCAGTAGTAAGTGGTGAAAACTTCTGTGTCCGACTGCTAGATTTTAAATTATCTAAAAGCTAGTTGGTATTAACATATAGTTACTATCCTGATTGTTTGTTTTCTCTGTGTGTGTGTGTCCCTGTGTGTCCCTGCGTTCTTGACATTTATCTGATGCATTTTTCATTTTCATTTTGACGACTAATGAGTTTTTGCTATGCCGTACTAATTTATAAAGAATACAAACTTTCCATGCTTTTAATTTGCTGCAGTTTCTTACCTACGCGTGATTGTTGCAGAGATGAAAAAACAGTCAAGGAGGACAGTAGTTCTTGAAGAAGAGACAGCAGCATTTGGAAAACAACGGAGCTTTAGGAGAACGCTTTGCAATGGAGTGTAGCTTGAGCCAGGTATTGGCAGGAACATTTATTAGTGGTTTATAATCAATTTCTAAATAGTCTACTTCAAGCATACCATCTTCTTATATTTCACTTCCCTTAGTGTGATGGGCATACATGAAGATGAAGCTGGCTCTCTCTTGTAAAGGAGTTGTACTGGAGTGTGTGAGCATACAAGTTTAGTTGAAGCAATAGGGTGTCTTTTGTAGGAGATATACTGATGTATCTGAGAGGGGCTTATCTTCAATGGATGATAAAGTGGACATATACTATGTTTTTTGTAACATATATTCCTTGTTTGGGGATTTGATTTCATCAGATTCTCAGTTGCATACATGAATTTTTGAATAAATATAATTATCCGTTTCTGA TTTCTTTTCCTTTCTCCCCCCCCCCAAAAAAGCGCATTAACATCAGTTCTCCTACCGTCGTTAATCAAAAGGGCGGAAACCATGAAATTCACAAACTCACCGGTGATCGAACTCGTCGTCAACAACAACACACTCTCTCTCCAACAGGACAACAAAACCATGCACGTCGGCACCTCCGTGTGGCCCGGTTCCATTGTTCTTGTCAAATTTGCCGATCACTGGTCTTCCTTAAACCCTAAAACCCCAAACCCTAACCCTTACTCCGACCTCCTCAACTTCAGCGGCAAACGCGGCGTCGAACTTGGTACAGGCTGCGGCGTCGCCGGTATGGGCCTCTACCTATTGGGCCTAACCGACGTTTACCTCACCGACATTGCCGCTGTTATGCCAGCTTTAAAGCATAACCTGAAGAAGAATAAGCCAGTATTGAAGAAATCCTTGAAGATTGCCCAGTTGTATTGGGCTAATTCTGTCCAAATTAAGGCTCTTTCACCGCCCTTTGATGTTGTGATTGCTGCTGATGTGGTGTATTTGGAGGAGACAGTGAGGCCATTGGTTGAAACTATGGTGAAAATGGTGGCAGAGGACGGTGTGGTATTGCTTGGGTATCAGTTACGGTCGCCGGAAGCTGATAAATTGTTTTGGGAAGTTTCCGGGGAGGTTTTCAAAATTGAGAAGGTGCCGCATGAAGATTTGCATCCTGAGTATAATTATGAAGAGACTGATGTTTATATTTTCAGGAAAAAGAAGAATTTGATTGAAGATGAAAAAACAGTCAAGGAGGACAGTAGTTCTTGAAGAAGAGACAGCAGCATTTGGAAAACAACGGAGCTTTAGGAGAACGCTTTGCAATGGAGTGTAGCTTGAGCCAGGTATTGGCAGGAACATTTATTAGTGGTTTATAATCAATTTCTAAATAGTCTACTTCAAGCATACCATCTTCTTATATTTCACTTCCCTTAGTGTGATGGGCATACATGAAGATGAAGCTGGCTCTCTCTTGTAAAGGAGTTGTACTGGAGTGTGTGAGCATACAAGTTTAGTTGAAGCAATAGGGTGTCTTTTGTAGGAGATATACTGATGTATCTGAGAGGGGCTTATCTTCAATGGATGATAAAGTGGACATATACTATGTTTTTTGTAACATATATTCCTTGTTTGGGGATTTGATTTCATCAGATTCTCAGTTGCATACATGAATTTTTGAATAAATATAATTATCCGTTTCTGA ATGAAATTCACAAACTCACCGGTGATCGAACTCGTCGTCAACAACAACACACTCTCTCTCCAACAGGACAACAAAACCATGCACGTCGGCACCTCCGTGTGGCCCGGTTCCATTGTTCTTGTCAAATTTGCCGATCACTGGTCTTCCTTAAACCCTAAAACCCCAAACCCTAACCCTTACTCCGACCTCCTCAACTTCAGCGGCAAACGCGGCGTCGAACTTGGTACAGGCTGCGGCGTCGCCGGTATGGGCCTCTACCTATTGGGCCTAACCGACGTTTACCTCACCGACATTGCCGCTGTTATGCCAGCTTTAAAGCATAACCTGAAGAAGAATAAGCCAGTATTGAAGAAATCCTTGAAGATTGCCCAGTTGTATTGGGCTAATTCTGTCCAAATTAAGGCTCTTTCACCGCCCTTTGATGTTGTGATTGCTGCTGATGTGGTGTATTTGGAGGAGACAGTGAGGCCATTGGTTGAAACTATGGTGAAAATGGTGGCAGAGGACGGTGTGGTATTGCTTGGGTATCAGTTACGGTCGCCGGAAGCTGATAAATTGTTTTGGGAAGTTTCCGGGGAGGTTTTCAAAATTGAGAAGGTGCCGCATGAAGATTTGCATCCTGAGTATAATTATGAAGAGACTGATGTTTATATTTTCAGGAAAAAGAAGAATTTGATTGAAGATGAAAAAACAGTCAAGGAGGACAGTAGTTCTTGA MKFTNSPVIELVVNNNTLSLQQDNKTMHVGTSVWPGSIVLVKFADHWSSLNPKTPNPNPYSDLLNFSGKRGVELGTGCGVAGMGLYLLGLTDVYLTDIAAVMPALKHNLKKNKPVLKKSLKIAQLYWANSVQIKALSPPFDVVIAADVVYLEETVRPLVETMVKMVAEDGVVLLGYQLRSPEADKLFWEVSGEVFKIEKVPHEDLHPEYNYEETDVYIFRKKKNLIEDEKTVKEDSSS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo04986.1 vs. NCBI nr
Match: gi|902134337|gb|KNA04393.1| (hypothetical protein SOVF_200220 [Spinacia oleracea]) HSP 1 Score: 474.2 bits (1219), Expect = 1.400e-130 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1
BLAST of Spo04986.1 vs. NCBI nr
Match: gi|731356643|ref|XP_010689781.1| (PREDICTED: protein-lysine methyltransferase METTL21B [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 376.3 bits (965), Expect = 3.900e-101 Identity = 186/239 (77.82%), Postives = 211/239 (88.28%), Query Frame = 1
BLAST of Spo04986.1 vs. NCBI nr
Match: gi|661880346|emb|CDP15877.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 334.3 bits (856), Expect = 1.700e-88 Identity = 168/234 (71.79%), Postives = 193/234 (82.48%), Query Frame = 1
BLAST of Spo04986.1 vs. NCBI nr
Match: gi|747104045|ref|XP_011100243.1| (PREDICTED: protein-lysine methyltransferase METTL21D [Sesamum indicum]) HSP 1 Score: 323.9 bits (829), Expect = 2.300e-85 Identity = 157/223 (70.40%), Postives = 184/223 (82.51%), Query Frame = 1
BLAST of Spo04986.1 vs. NCBI nr
Match: gi|698567610|ref|XP_009773824.1| (PREDICTED: protein-lysine methyltransferase METTL21D [Nicotiana sylvestris]) HSP 1 Score: 322.0 bits (824), Expect = 8.700e-85 Identity = 162/225 (72.00%), Postives = 186/225 (82.67%), Query Frame = 1
BLAST of Spo04986.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCH7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_200220 PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 9.500e-131 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1
BLAST of Spo04986.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BPR1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g209550 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 2.700e-101 Identity = 186/239 (77.82%), Postives = 211/239 (88.28%), Query Frame = 1
BLAST of Spo04986.1 vs. UniProtKB/TrEMBL
Match: A0A068V5P1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016781001 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 1.200e-88 Identity = 168/234 (71.79%), Postives = 193/234 (82.48%), Query Frame = 1
BLAST of Spo04986.1 vs. UniProtKB/TrEMBL
Match: M1AJW3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009398 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 7.900e-85 Identity = 163/227 (71.81%), Postives = 187/227 (82.38%), Query Frame = 1
BLAST of Spo04986.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LN16_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408980 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.000e-84 Identity = 153/223 (68.61%), Postives = 184/223 (82.51%), Query Frame = 1
BLAST of Spo04986.1 vs. ExPASy Swiss-Prot
Match: MT21D_HUMAN (Protein-lysine methyltransferase METTL21D OS=Homo sapiens GN=VCPKMT PE=1 SV=2) HSP 1 Score: 86.3 bits (212), Expect = 5.000e-16 Identity = 61/201 (30.35%), Postives = 100/201 (49.75%), Query Frame = 1
BLAST of Spo04986.1 vs. ExPASy Swiss-Prot
Match: MT21D_MOUSE (Protein-lysine methyltransferase METTL21D OS=Mus musculus GN=Vcpkmt PE=2 SV=2) HSP 1 Score: 83.2 bits (204), Expect = 4.300e-15 Identity = 59/200 (29.50%), Postives = 100/200 (50.00%), Query Frame = 1
BLAST of Spo04986.1 vs. ExPASy Swiss-Prot
Match: MT21A_DANRE (Protein N-lysine methyltransferase METTL21A OS=Danio rerio GN=mettl21a PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.300e-15 Identity = 60/216 (27.78%), Postives = 111/216 (51.39%), Query Frame = 1
BLAST of Spo04986.1 vs. ExPASy Swiss-Prot
Match: MT21A_HUMAN (Protein N-lysine methyltransferase METTL21A OS=Homo sapiens GN=METTL21A PE=1 SV=2) HSP 1 Score: 79.0 bits (193), Expect = 8.000e-14 Identity = 63/227 (27.75%), Postives = 111/227 (48.90%), Query Frame = 1
BLAST of Spo04986.1 vs. ExPASy Swiss-Prot
Match: MT21A_MOUSE (Protein N-lysine methyltransferase METTL21A OS=Mus musculus GN=Mettl21A PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 8.000e-14 Identity = 62/227 (27.31%), Postives = 113/227 (49.78%), Query Frame = 1
BLAST of Spo04986.1 vs. TAIR (Arabidopsis)
Match: AT5G44170.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 308.1 bits (788), Expect = 4.600e-84 Identity = 155/231 (67.10%), Postives = 183/231 (79.22%), Query Frame = 1
BLAST of Spo04986.1 vs. TAIR (Arabidopsis)
Match: AT1G08125.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 123.2 bits (308), Expect = 2.100e-28 Identity = 81/250 (32.40%), Postives = 124/250 (49.60%), Query Frame = 1
BLAST of Spo04986.1 vs. TAIR (Arabidopsis)
Match: AT1G73320.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 91.7 bits (226), Expect = 6.700e-19 Identity = 62/208 (29.81%), Postives = 108/208 (51.92%), Query Frame = 1
BLAST of Spo04986.1 vs. TAIR (Arabidopsis)
Match: AT5G49560.1 (Putative methyltransferase family protein) HSP 1 Score: 67.4 bits (163), Expect = 1.400e-11 Identity = 49/195 (25.13%), Postives = 96/195 (49.23%), Query Frame = 1
BLAST of Spo04986.1 vs. TAIR (Arabidopsis)
Match: AT3G50850.1 (Putative methyltransferase family protein) HSP 1 Score: 57.4 bits (137), Expect = 1.400e-8 Identity = 46/193 (23.83%), Postives = 88/193 (45.60%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo04986.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo04986.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo04986.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo04986.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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