Spo04987 (gene) | SpinachBase

Overview


Name	Spo04987
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Hydroxyproline-rich glycoprotein family protein
Location	chr6 : 12356349 .. 12359174 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACGATTCATATTCATTTATCTGCATTTCTCTTTTTCTCTCTCTCAGTCCTCCATTTTCATTCATTATCCGAGTTTTGAGTTATAAATATAATAATAAAGGCTCTGGTTTGGCCTATGAGAGAAAGAATAGCCGTAAATAGGAAATTATACGATGGAGCACAGTCCAGTTTACAACCCTGTAGTACATCACCATTCCGATGCATCACGACCGTCCCTTGGTTTTCCACTTGGAACAGCTCTTCTTTTATTGGTGATCTTCAGTTTAAGTGGGATTTTCTCATGTTGTTATCATTGGGACAAGTTTCGATCACTCCGTCAATCTTATTCCGATGATCTTGACCTTGAAGCTGCTAATCACCCTGCTAAACCCAATTACCCTAATTACTTATTGGTAAGTTGTTTCTTTCTTTGTTATTCATACTAATACTTACGCCAAACTCTTCCTTTTATTCCTAAATAAATCACTTATTCTTAGATCGAGAATTCTTTTTTAATGTCTTATAATAACTTCAATTATAAATTTTTGAATTACTCCGTACATAACAAACGTTAAAAATTAAAAACATTGACGAGATAGCTAAATACATACAACAAGGGCATAAGGCTAATCCGCTAATCTAATCATAATTAGGTTTGATTTACGCTTTACATTCTTCTAGATTTTTGAGTACTCCATTCCCTCTATGAGTCGGACTGTGGATCCCATTTTTTAAATTACAAATTTAATTATTAGATGGAGAATATTAAATATTTTCCGTACTAATTTAACTGGATTTTGATTTTGAGCCCTGTGCGATACCATTTTTTACAGGTACGTTTAGAATAAGTGTTTTTTTTTAAAAGCCTTTTCCATAAAATGGGGTGAGTGTTTTTCTTTTCCATGTAAAACAATACGGAGTACAGTATATCGTAGTCTTATACGGAGTACGATCTTAGTTTTTTTTTAAAATATATTATTACATGAACTCCAATACAATATTTAATTATTAATATTTTTAATTTAATGCGAATTATAAATCATCAATTTGGAATATAAATCGACAAGAATCTCACGTAATTAATATTAATGATTTGATGAACATAGTCAAAATTGACGGAATTAAAGTCAAAGTTTAAAAACTTTGAACAAAATGTTATTGTTGAAGTTTTTTTTTTTTTTTTTCAAGCAGATGTAGCCAAAAAATCTTAAAGTAAGTCTATGCTTAAGTTATCTTACATTATAAAGTTCAAATTCAAATTTGCAAAAAACAACTTTAAATTTGGATATTGGCTATTTTTGGCTATAGAAATAAATTTATTAATTTATTTTAGGTGGTCATATAAATTAGGTGTTGGATATGAATGGCACCGAATATTAAAAAGTAACACCAAAGGCCCACAAGAGTTACACACTCATTCTTTTTTTTGTTTTTGTTTTTGTTGAGGGGAATACATACTCACTAATAGCTGGCTTTATTAATGCTTTTTAATTCCTTAATTACGTTTTCAAAAATATATTGCTGTTAATTTAAATGAAAAGATACTGACGTTACTTTCTTAGGCTTCCTTTTCAATCCTATATAATGCCTTATTTGTAGTTGAGTGAAAGGGAAGATCTCATATGCCATAGGGGCGTAGGCTAGTTATTGGAGGAAGATATTGTACTAATCTATTTATTCCGGTTTCGGAAATATAGTCTTGTTTTCAGACACCAACTCTTACAAAAAAAAAAAAAACACACGATCATTCTTCCAAGGCAATATTCACCCTCGCCATTTTTATTAGAATGTCGTTCTTTTCTACTCCCTCCATATTTAGTTACCTTTATTTTTCTTATTTAACTATCATGGTCTCCACTTTTAATATATTAATTAATATATCTCTCTTTCTTTGTAGTCCTTAAATTTACTCACATCATTTTTACTACAATAAATAATTCACTCACTACCCTCACTCTCCATCTTATTTTAATAAATTGGACTCACTATACTAAAACTACGTGTCGGTTAAACTATATTCTTTAATTAAATATGGAGGAAGTATGGAATACCAAACTATTTTTCCAATTGTAATGTGAATACTTAGTTTATTTTTTTTAAAGTAAAATTAATTCATCGATAAAAAGTAATATAATTAAAATTATTAACTAGCTGATTAGTATGTTTACAACTAAGATTTAGTTTTAGCTTATTATAATTGATTTATTTGTAATTTTGTATCTACGTGTGGTGTTTTGGATCGATAACAAAATAGCATACAGTATACTGATAAATTATGTTGGTTGAAAATGCAGAAACAACAACAAATGGAAAGCCTACCAGTGATAATGCCAGGAGACAATATAGCGAAGTTTATAGCTCTACCATGCCCATGTGAACCACATCGCCCAGAAATGCAAGCCCCAATTCCAACTCCTAATAAACCTGCTAAGCCGCCACGTTTCCCAGTCCCTTTGTATTGATCCATTATTATTATTATTATTATTATCTAATTAATTAATTTATGATTAGATTATTTTTTTTTATCACATTTTTCTACACAAAAAAGTTGACAAATTTGGTTTATAATCTTGTAGTACTCGTAGTTAATACTTTGTAGTTTGTAAATACATAATATTATTACGTGAATTTTCTTCTCCCTGAGTCATACTGTTTGTGTATTAGTTAGTTTTATTGGTTGATGTTGGTATTAGTATTTTACATGGCATACCAGTTTCACAAATTGCGAAGAAGATGGTTAATTTGGGTTCTATGAGAATCTGATGTGTTGCCTGCTGCATATGTTGTTTATTACTCCCTGATGAGTGATGAGTGATGAGTGATGACCAAATCAGGGGATTCTCTG

mRNA sequence

CACACGATTCATATTCATTTATCTGCATTTCTCTTTTTCTCTCTCTCAGTCCTCCATTTTCATTCATTATCCGAGTTTTGAGTTATAAATATAATAATAAAGGCTCTGGTTTGGCCTATGAGAGAAAGAATAGCCGTAAATAGGAAATTATACGATGGAGCACAGTCCAGTTTACAACCCTGTAGTACATCACCATTCCGATGCATCACGACCGTCCCTTGGTTTTCCACTTGGAACAGCTCTTCTTTTATTGGTGATCTTCAGTTTAAGTGGGATTTTCTCATGTTGTTATCATTGGGACAAGTTTCGATCACTCCGTCAATCTTATTCCGATGATCTTGACCTTGAAGCTGCTAATCACCCTGCTAAACCCAATTACCCTAATTACTTATTGAAACAACAACAAATGGAAAGCCTACCAGTGATAATGCCAGGAGACAATATAGCGAAGTTTATAGCTCTACCATGCCCATGTGAACCACATCGCCCAGAAATGCAAGCCCCAATTCCAACTCCTAATAAACCTGCTAAGCCGCCACGTTTCCCAGTCCCTTTGTATTGATCCATTATTATTATTATTATTATTATCTAATTAATTAATTTATGATTAGATTATTTTTTTTTATCACATTTTTCTACACAAAAAAGTTGACAAATTTGGTTTATAATCTTGTAGTACTCGTAGTTAATACTTTGTAGTTTGTAAATACATAATATTATTACGTGAATTTTCTTCTCCCTGAGTCATACTGTTTGTGTATTAGTTAGTTTTATTGGTTGATGTTGGTATTAGTATTTTACATGGCATACCAGTTTCACAAATTGCGAAGAAGATGGTTAATTTGGGTTCTATGAGAATCTGATGTGTTGCCTGCTGCATATGTTGTTTATTACTCCCTGATGAGTGATGAGTGATGAGTGATGACCAAATCAGGGGATTCTCTG

Coding sequence (CDS)

ATGGAGCACAGTCCAGTTTACAACCCTGTAGTACATCACCATTCCGATGCATCACGACCGTCCCTTGGTTTTCCACTTGGAACAGCTCTTCTTTTATTGGTGATCTTCAGTTTAAGTGGGATTTTCTCATGTTGTTATCATTGGGACAAGTTTCGATCACTCCGTCAATCTTATTCCGATGATCTTGACCTTGAAGCTGCTAATCACCCTGCTAAACCCAATTACCCTAATTACTTATTGAAACAACAACAAATGGAAAGCCTACCAGTGATAATGCCAGGAGACAATATAGCGAAGTTTATAGCTCTACCATGCCCATGTGAACCACATCGCCCAGAAATGCAAGCCCCAATTCCAACTCCTAATAAACCTGCTAAGCCGCCACGTTTCCCAGTCCCTTTGTATTGA

Protein sequence

MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSDDLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPTPNKPAKPPRFPVPLY

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04987.1	Spo04987.1	mRNA

Homology

[Close]

BLAST of Spo04987.1 vs. NCBI nr
Match: gi|902237126|gb|KNA24651.1| (hypothetical protein SOVF_013680 [Spinacia oleracea])

HSP 1 Score: 286.2 bits (731), Expect = 3.000e-74
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1

		  
Query: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60
           MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD
Sbjct: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60

Query: 61  DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPT 120
           DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPT
Sbjct: 61  DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPT 120

Query: 121 PNKPAKPPRFPVPLY 136
           PNKPAKPPRFPVPLY
Sbjct: 121 PNKPAKPPRFPVPLY 135

[Close]

BLAST of Spo04987.1 vs. NCBI nr
Match: gi|731343773|ref|XP_010683058.1| (PREDICTED: uncharacterized protein At5g65660 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 215.7 bits (548), Expect = 5.000e-53
Identity = 111/138 (80.43%), Postives = 118/138 (85.51%), Query Frame = 1

		  
Query: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60
           M+HSP+Y+PV HH SD SRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLR+SY+ 
Sbjct: 2   MQHSPLYSPVPHH-SDGSRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRRSYNH 61

Query: 61  DLDLEAANH---PAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAP 120
           DLD+EAANH   PAKP   NY  KQ+QM SLPVIMPGD IAKFIALPCPCEP RPE QAP
Sbjct: 62  DLDIEAANHHSDPAKPK-SNY-FKQEQMGSLPVIMPGDKIAKFIALPCPCEPPRPEKQAP 121

Query: 121 IPTPNKPAKPPRFPVPLY 136
           IPT  K  KPPRFPVPLY
Sbjct: 122 IPTTEKTPKPPRFPVPLY 136

[Close]

BLAST of Spo04987.1 vs. NCBI nr
Match: gi|223531648|gb|EEF33474.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 165.2 bits (417), Expect = 7.700e-38
Identity = 89/133 (66.92%), Postives = 100/133 (75.19%), Query Frame = 1

		  
Query: 5   PVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSDDLDL 64
           P Y+P    H DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLR+S+SDD D 
Sbjct: 18  PHYSPP---HVDASRPSLGFPLGTALLLIIIFTLSGIFSCCYHWDKLRSLRRSFSDDPDP 77

Query: 65  EA--ANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPTPN 124
           EA     P+KP   N  LKQ Q +S PV+MPGD I KFIALPCPCEP R E +  +  P 
Sbjct: 78  EADIEASPSKPKPHNMDLKQNQSQSFPVLMPGDQIPKFIALPCPCEPPRAE-KVVLKVP- 137

Query: 125 KPAKPPRFPVPLY 136
           KP KPPRFPVPLY
Sbjct: 138 KPPKPPRFPVPLY 145

[Close]

BLAST of Spo04987.1 vs. NCBI nr
Match: gi|1000947140|ref|XP_015580681.1| (PREDICTED: uncharacterized protein At5g65660 [Ricinus communis])

HSP 1 Score: 164.1 bits (414), Expect = 1.700e-37
Identity = 86/124 (69.35%), Postives = 96/124 (77.42%), Query Frame = 1

		  
Query: 14  HSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSDDLDLEA--ANHPA 73
           H DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLR+S+SDD D EA     P+
Sbjct: 12  HVDASRPSLGFPLGTALLLIIIFTLSGIFSCCYHWDKLRSLRRSFSDDPDPEADIEASPS 71

Query: 74  KPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPTPNKPAKPPRFP 133
           KP   N  LKQ Q +S PV+MPGD I KFIALPCPCEP R E +  +  P KP KPPRFP
Sbjct: 72  KPKPHNMDLKQNQSQSFPVLMPGDQIPKFIALPCPCEPPRAE-KVVLKVP-KPPKPPRFP 131

Query: 134 VPLY 136
           VPLY
Sbjct: 132 VPLY 133

[Close]

BLAST of Spo04987.1 vs. NCBI nr
Match: gi|359480520|ref|XP_003632481.1| (PREDICTED: uncharacterized protein At5g65660 [Vitis vinifera])

HSP 1 Score: 161.0 bits (406), Expect = 1.500e-36
Identity = 86/136 (63.24%), Postives = 99/136 (72.79%), Query Frame = 1

		  
Query: 4   SPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSDDLD 63
           SP ++P    HSD SRPSLGFPLGTALLL++IFSLSGIFSCCYHWDK RSLR+S+SDD D
Sbjct: 3   SPDFSPP---HSDPSRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKLRSLRRSFSDDRD 62

Query: 64  LEA----ANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIP 123
            EA    +    KP Y    LKQ   +S+PV+MPGD I KFIALPCPCEP R E +  + 
Sbjct: 63  PEADVRESPSKTKPEYTG--LKQNLSQSMPVLMPGDQIPKFIALPCPCEPPRAE-KIVVQ 122

Query: 124 TPNKPAKPPRFPVPLY 136
               P+KPPRFPVPLY
Sbjct: 123 VQKPPSKPPRFPVPLY 132

[Close]

BLAST of Spo04987.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RYS1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_013680 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.100e-74
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1

		  
Query: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60
           MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD
Sbjct: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60

Query: 61  DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPT 120
           DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPT
Sbjct: 61  DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPT 120

Query: 121 PNKPAKPPRFPVPLY 136
           PNKPAKPPRFPVPLY
Sbjct: 121 PNKPAKPPRFPVPLY 135

[Close]

BLAST of Spo04987.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C0F1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g152920 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.500e-53
Identity = 111/138 (80.43%), Postives = 118/138 (85.51%), Query Frame = 1

		  
Query: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60
           M+HSP+Y+PV HH SD SRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLR+SY+ 
Sbjct: 2   MQHSPLYSPVPHH-SDGSRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRRSYNH 61

Query: 61  DLDLEAANH---PAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAP 120
           DLD+EAANH   PAKP   NY  KQ+QM SLPVIMPGD IAKFIALPCPCEP RPE QAP
Sbjct: 62  DLDIEAANHHSDPAKPK-SNY-FKQEQMGSLPVIMPGDKIAKFIALPCPCEPPRPEKQAP 121

Query: 121 IPTPNKPAKPPRFPVPLY 136
           IPT  K  KPPRFPVPLY
Sbjct: 122 IPTTEKTPKPPRFPVPLY 136

[Close]

BLAST of Spo04987.1 vs. UniProtKB/TrEMBL
Match: B9SSC5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0187520 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.400e-38
Identity = 89/133 (66.92%), Postives = 100/133 (75.19%), Query Frame = 1

		  
Query: 5   PVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSDDLDL 64
           P Y+P    H DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLR+S+SDD D 
Sbjct: 18  PHYSPP---HVDASRPSLGFPLGTALLLIIIFTLSGIFSCCYHWDKLRSLRRSFSDDPDP 77

Query: 65  EA--ANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPTPN 124
           EA     P+KP   N  LKQ Q +S PV+MPGD I KFIALPCPCEP R E +  +  P 
Sbjct: 78  EADIEASPSKPKPHNMDLKQNQSQSFPVLMPGDQIPKFIALPCPCEPPRAE-KVVLKVP- 137

Query: 125 KPAKPPRFPVPLY 136
           KP KPPRFPVPLY
Sbjct: 138 KPPKPPRFPVPLY 145

[Close]

BLAST of Spo04987.1 vs. UniProtKB/TrEMBL
Match: D7SSI8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0205g00010 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.000e-36
Identity = 86/136 (63.24%), Postives = 99/136 (72.79%), Query Frame = 1

		  
Query: 4   SPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSDDLD 63
           SP ++P    HSD SRPSLGFPLGTALLL++IFSLSGIFSCCYHWDK RSLR+S+SDD D
Sbjct: 3   SPDFSPP---HSDPSRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKLRSLRRSFSDDRD 62

Query: 64  LEA----ANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIP 123
            EA    +    KP Y    LKQ   +S+PV+MPGD I KFIALPCPCEP R E +  + 
Sbjct: 63  PEADVRESPSKTKPEYTG--LKQNLSQSMPVLMPGDQIPKFIALPCPCEPPRAE-KIVVQ 122

Query: 124 TPNKPAKPPRFPVPLY 136
               P+KPPRFPVPLY
Sbjct: 123 VQKPPSKPPRFPVPLY 132

[Close]

BLAST of Spo04987.1 vs. UniProtKB/TrEMBL
Match: A0A061DHB3_THECC (Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao GN=TCM_000913 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.300e-36
Identity = 83/127 (65.35%), Postives = 97/127 (76.38%), Query Frame = 1

		  
Query: 14  HSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD----DLDLEAANH 73
           H DASRPSLGFPLGTALLL++IFSLSGIFSCCYHWDK RSLR+S SD    D D+EA+  
Sbjct: 10  HVDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKLRSLRRSISDGTGPDADIEASPS 69

Query: 74  PAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPE-MQAPIPTPNKPAKPP 133
            +KP Y +  LK+ Q +SLPV+MPGD I KFIA PCPCEP  P+ ++  +    KP KPP
Sbjct: 70  KSKPEYMD--LKENQSQSLPVLMPGDQIPKFIAFPCPCEPPGPDKVEVKV---QKPPKPP 129

Query: 134 RFPVPLY 136
           RFPVPLY
Sbjct: 130 RFPVPLY 131

[Close]

BLAST of Spo04987.1 vs. ExPASy Swiss-Prot
Match: Y5566_ARATH (Uncharacterized protein At5g65660 OS=Arabidopsis thaliana GN=At5g65660 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.500e-36
Identity = 81/141 (57.45%), Postives = 100/141 (70.92%), Query Frame = 1

		  
Query: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60
           ME++  ++P    H DASRPSLGFPLGTALLL++IFSLSGIFSCCYHWDK RSLR+S ++
Sbjct: 1   MENTQDFSPP---HMDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLAN 60

Query: 61  ---DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPE---M 120
                D+E+  +  KP +P   +K+ Q  S+PV+MPGDN  KFIALPCPC P RPE   +
Sbjct: 61  GRPSADIESNPYKPKPPFPE--MKKPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTV 120

Query: 121 QAPIPTPNKPAKPPRFPVPLY 136
               P  + P KP RFPVPLY
Sbjct: 121 DVQTPPQSPPVKPARFPVPLY 136

[Close]

BLAST of Spo04987.1 vs. TAIR (Arabidopsis)
Match: AT5G65660.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 151.8 bits (382), Expect = 3.100e-37
Identity = 81/141 (57.45%), Postives = 100/141 (70.92%), Query Frame = 1

		  
Query: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60
           ME++  ++P    H DASRPSLGFPLGTALLL++IFSLSGIFSCCYHWDK RSLR+S ++
Sbjct: 1   MENTQDFSPP---HMDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLAN 60

Query: 61  ---DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPE---M 120
                D+E+  +  KP +P   +K+ Q  S+PV+MPGDN  KFIALPCPC P RPE   +
Sbjct: 61  GRPSADIESNPYKPKPPFPE--MKKPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTV 120

Query: 121 QAPIPTPNKPAKPPRFPVPLY 136
               P  + P KP RFPVPLY
Sbjct: 121 DVQTPPQSPPVKPARFPVPLY 136

The following BLAST results are available for this feature:

BLAST of Spo04987.1 vs. NCBI nr
BLAST of Spo04987.1 vs. UniProtKB/TrEMBL
BLAST of Spo04987.1 vs. ExPASy Swiss-Prot
BLAST of Spo04987.1 vs. TAIR (Arabidopsis)

BLAST of Spo04987.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902237126\|gb\|KNA24651.1\|	3.0e-74	100.	hypothetical protein SOVF_0136...	[more]
gi\|731343773\|ref\|XP_010683058.1\|	5.0e-53	80.4	PREDICTED: uncharacterized pro...	[more]
gi\|223531648\|gb\|EEF33474.1\|	7.7e-38	66.9	conserved hypothetical protein...	[more]
gi\|1000947140\|ref\|XP_015580681.1\|	1.7e-37	69.3	PREDICTED: uncharacterized pro...	[more]
gi\|359480520\|ref\|XP_003632481.1\|	1.5e-36	63.2	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo04987.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RYS1_SPIOL	2.1e-74	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C0F1_BETVU	3.5e-53	80.4	Uncharacterized protein OS=Bet...	[more]
B9SSC5_RICCO	5.4e-38	66.9	Putative uncharacterized prote...	[more]
D7SSI8_VITVI	1.0e-36	63.2	Putative uncharacterized prote...	[more]
A0A061DHB3_THECC	1.3e-36	65.3	Hydroxyproline-rich glycoprote...	[more]

BLAST of Spo04987.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
Y5566_ARATH	5.5e-36	57.4	Uncharacterized protein At5g65...	[more]

BLAST of Spo04987.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G65660.1	3.1e-37	57.4	hydroxyproline-rich glycoprote...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34291	FAMILY NOT NAMED	coord: 4..135 score: 3.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0000188	inactivation of MAPK activity
biological_process	GO:0007155	cell adhesion
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0042732	D-xylose metabolic process
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0016998	cell wall macromolecule catabolic process
biological_process	GO:0006570	tyrosine metabolic process
biological_process	GO:0009611	response to wounding
biological_process	GO:0010193	response to ozone
biological_process	GO:0002213	defense response to insect
biological_process	GO:0035335	peptidyl-tyrosine dephosphorylation
biological_process	GO:0034051	negative regulation of plant-type hypersensitive response
biological_process	GO:0034053	modulation by symbiont of host defense-related programmed cell death
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0071472	cellular response to salt stress
biological_process	GO:0034599	cellular response to oxidative stress
biological_process	GO:0034605	cellular response to heat
biological_process	GO:0070417	cellular response to cold
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0000186	activation of MAPKK activity
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process	GO:0009069	serine family amino acid metabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0048046	apoplast
molecular_function	GO:0004034	aldose 1-epimerase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0004725	protein tyrosine phosphatase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0008138	protein tyrosine/serine/threonine phosphatase activity
molecular_function	GO:0033549	MAP kinase phosphatase activity
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0004709	MAP kinase kinase kinase activity
molecular_function	GO:0005515	protein binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo01691	0.78	Barchart \| Table
Spo12025	0.77	Barchart \| Table
Spo25787	0.77	Barchart \| Table
Spo11203	0.75	Barchart \| Table
Spo24669	0.75	Barchart \| Table
Spo07484	0.75	Barchart \| Table
Spo12934	0.75	Barchart \| Table
Spo09352	0.74	Barchart \| Table
Spo07791	0.74	Barchart \| Table
Spo24426	0.73	Barchart \| Table
Spo03683	0.73	Barchart \| Table
Spo11193	0.73	Barchart \| Table
Spo21656	0.72	Barchart \| Table
Spo08122	0.72	Barchart \| Table
Spo16587	0.71	Barchart \| Table
Spo20749	0.70	Barchart \| Table
Spo09762	0.70	Barchart \| Table
Spo23836	0.70	Barchart \| Table
Spo21676	0.70	Barchart \| Table
Spo22460	0.69	Barchart \| Table
Spo18120	0.69	Barchart \| Table
Spo18928	0.69	Barchart \| Table
Spo05709	0.69	Barchart \| Table
Spo24516	0.69	Barchart \| Table
Spo03505	0.69	Barchart \| Table
Spo23248	0.68	Barchart \| Table
Spo15145	0.68	Barchart \| Table
Spo10906	0.68	Barchart \| Table
Spo08205	0.68	Barchart \| Table
Spo09150	0.68	Barchart \| Table
Spo04763	0.68	Barchart \| Table
Spo20619	0.68	Barchart \| Table
Spo24919	0.68	Barchart \| Table
Spo11773	0.68	Barchart \| Table
Spo01807	0.67	Barchart \| Table
Spo04405	0.67	Barchart \| Table
Spo12217	0.67	Barchart \| Table
Spo12341	0.67	Barchart \| Table
Spo02252	0.67	Barchart \| Table
Spo13181	0.67	Barchart \| Table
Spo13383	0.67	Barchart \| Table
Spo14032	0.67	Barchart \| Table
Spo24790	0.67	Barchart \| Table
Spo07049	0.66	Barchart \| Table
Spo24866	0.66	Barchart \| Table
Spo10737	0.66	Barchart \| Table
Spo24976	0.66	Barchart \| Table
Spo11910	0.66	Barchart \| Table
Spo17085	0.66	Barchart \| Table
Spo23843	0.66	Barchart \| Table
Spo22005	0.66	Barchart \| Table
Spo00172	0.66	Barchart \| Table
Spo00385	0.66	Barchart \| Table
Spo16584	0.66	Barchart \| Table
Spo20595	0.65	Barchart \| Table
Spo03575	0.65	Barchart \| Table
Spo23939	0.65	Barchart \| Table
Spo10752	0.65	Barchart \| Table
Spo18834	0.65	Barchart \| Table