Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAGTATTTAAGGTCCATCAAGGTGGTGAGTCTCTTTGAAAAAACCACTAAGTGTTACCTAACAGCTTGTGAAGACAAGCAAACAATAACTCTGGTTCGAAAGCAGGAATCGAGCGACCCTGGATCACCCCCGAAAGGAGCAGAGTGGAGAGTAAAGTGGATAAAAGGGGCAACTGGTGCTTTATCCGGTAAATGCCGCCTCCACAGCTTCTATAAAAAGGCGCTCATGGTTCGGCGTGAAGCTGCAGGTGAAGGTCAGCAGAGCTATTTGAAAGTGTTCCAAGAGCGTTGGCCTCCACTAGAGCAGTACAGTAACGCTGTTTCTGAATGGAACCTGAGCTTGAAGCATATCAGTTTCGAAAGAGGTCTGGGAATCGAGGCTCAGCTCTCAATAGATTATGAGAATCAAAGCTACTTCCTTGCAGGTCCTAAGTCTTGTATGATGAGTAACTTTGCCTATCCTAGGCTGGAACCGCGTACTTCAGCTACTAACTTACGCGTCCACGATTGGATAGTACTTCAGCTTCTTAATGCTGAGCAGCTACTCAAGAATAAGGATGGTTCTAAGAAACCGAATTCTACTAAAACCAGTAAACCTCCTCCTAATTCTCAGCCTCATTCTACGACTACTGGTGTTACTACTACTACTACTACTACTGCGACTTCTATTAGTCGGGAGGTTGCTGTTGTAAGGGGTCCATTTGGTAACAGCAGTCAATTGACAGGATGGCAGGTGGGGCAGGTAGTGTTGAACTACTTCACCTCGGCCACAGGAATTGGTGGTGCTTACTCGACTTATAATGCCGGCCACAACGTCAATGGATCCGGCACACAGACTAATGGAGACGTAAATGTGCGTACTGAAGTCGGTACTACCAGAGACGTTTCTGTCAGCTTTTATAGCAACAAAACTTCATCATCCCCACTTAAGTATGGTGGATGA ATGGACAAGTATTTAAGGTCCATCAAGGTGGTGAGTCTCTTTGAAAAAACCACTAAGTGTTACCTAACAGCTTGTGAAGACAAGCAAACAATAACTCTGGTTCGAAAGCAGGAATCGAGCGACCCTGGATCACCCCCGAAAGGAGCAGAGTGGAGAGTAAAGTGGATAAAAGGGGCAACTGGTGCTTTATCCGGTAAATGCCGCCTCCACAGCTTCTATAAAAAGGCGCTCATGGTTCGGCGTGAAGCTGCAGGTGAAGGTCAGCAGAGCTATTTGAAAGTGTTCCAAGAGCGTTGGCCTCCACTAGAGCAGTACAGTAACGCTGTTTCTGAATGGAACCTGAGCTTGAAGCATATCAGTTTCGAAAGAGGTCTGGGAATCGAGGCTCAGCTCTCAATAGATTATGAGAATCAAAGCTACTTCCTTGCAGGTCCTAAGTCTTGTATGATGAGTAACTTTGCCTATCCTAGGCTGGAACCGCGTACTTCAGCTACTAACTTACGCGTCCACGATTGGATAGTACTTCAGCTTCTTAATGCTGAGCAGCTACTCAAGAATAAGGATGGTTCTAAGAAACCGAATTCTACTAAAACCAGTAAACCTCCTCCTAATTCTCAGCCTCATTCTACGACTACTGGTGTTACTACTACTACTACTACTACTGCGACTTCTATTAGTCGGGAGGTTGCTGTTGTAAGGGGTCCATTTGGTAACAGCAGTCAATTGACAGGATGGCAGGTGGGGCAGGTAGTGTTGAACTACTTCACCTCGGCCACAGGAATTGGTGGTGCTTACTCGACTTATAATGCCGGCCACAACGTCAATGGATCCGGCACACAGACTAATGGAGACGTAAATGTGCGTACTGAAGTCGGTACTACCAGAGACGTTTCTGTCAGCTTTTATAGCAACAAAACTTCATCATCCCCACTTAAGTATGGTGGATGA ATGGACAAGTATTTAAGGTCCATCAAGGTGGTGAGTCTCTTTGAAAAAACCACTAAGTGTTACCTAACAGCTTGTGAAGACAAGCAAACAATAACTCTGGTTCGAAAGCAGGAATCGAGCGACCCTGGATCACCCCCGAAAGGAGCAGAGTGGAGAGTAAAGTGGATAAAAGGGGCAACTGGTGCTTTATCCGGTAAATGCCGCCTCCACAGCTTCTATAAAAAGGCGCTCATGGTTCGGCGTGAAGCTGCAGGTGAAGGTCAGCAGAGCTATTTGAAAGTGTTCCAAGAGCGTTGGCCTCCACTAGAGCAGTACAGTAACGCTGTTTCTGAATGGAACCTGAGCTTGAAGCATATCAGTTTCGAAAGAGGTCTGGGAATCGAGGCTCAGCTCTCAATAGATTATGAGAATCAAAGCTACTTCCTTGCAGGTCCTAAGTCTTGTATGATGAGTAACTTTGCCTATCCTAGGCTGGAACCGCGTACTTCAGCTACTAACTTACGCGTCCACGATTGGATAGTACTTCAGCTTCTTAATGCTGAGCAGCTACTCAAGAATAAGGATGGTTCTAAGAAACCGAATTCTACTAAAACCAGTAAACCTCCTCCTAATTCTCAGCCTCATTCTACGACTACTGGTGTTACTACTACTACTACTACTACTGCGACTTCTATTAGTCGGGAGGTTGCTGTTGTAAGGGGTCCATTTGGTAACAGCAGTCAATTGACAGGATGGCAGGTGGGGCAGGTAGTGTTGAACTACTTCACCTCGGCCACAGGAATTGGTGGTGCTTACTCGACTTATAATGCCGGCCACAACGTCAATGGATCCGGCACACAGACTAATGGAGACGTAAATGTGCGTACTGAAGTCGGTACTACCAGAGACGTTTCTGTCAGCTTTTATAGCAACAAAACTTCATCATCCCCACTTAAGTATGGTGGATGA MDKYLRSIKVVSLFEKTTKCYLTACEDKQTITLVRKQESSDPGSPPKGAEWRVKWIKGATGALSGKCRLHSFYKKALMVRREAAGEGQQSYLKVFQERWPPLEQYSNAVSEWNLSLKHISFERGLGIEAQLSIDYENQSYFLAGPKSCMMSNFAYPRLEPRTSATNLRVHDWIVLQLLNAEQLLKNKDGSKKPNSTKTSKPPPNSQPHSTTTGVTTTTTTTATSISREVAVVRGPFGNSSQLTGWQVGQVVLNYFTSATGIGGAYSTYNAGHNVNGSGTQTNGDVNVRTEVGTTRDVSVSFYSNKTSSSPLKYGG Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05038.1 vs. NCBI nr
Match: gi|902164905|gb|KNA07016.1| (hypothetical protein SOVF_175760 [Spinacia oleracea]) HSP 1 Score: 620.5 bits (1599), Expect = 1.600e-174 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1
BLAST of Spo05038.1 vs. NCBI nr
Match: gi|731358459|ref|XP_010690761.1| (PREDICTED: uncharacterized protein LOC104904255 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 271.6 bits (693), Expect = 1.800e-69 Identity = 159/312 (50.96%), Postives = 207/312 (66.35%), Query Frame = 1
BLAST of Spo05038.1 vs. NCBI nr
Match: gi|870848042|gb|KMT00331.1| (hypothetical protein BVRB_9g216450 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 271.6 bits (693), Expect = 1.800e-69 Identity = 159/312 (50.96%), Postives = 207/312 (66.35%), Query Frame = 1
BLAST of Spo05038.1 vs. NCBI nr
Match: gi|902164906|gb|KNA07017.1| (hypothetical protein SOVF_175770 [Spinacia oleracea]) HSP 1 Score: 66.2 bits (160), Expect = 1.100e-7 Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 1
BLAST of Spo05038.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QK94_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175760 PE=4 SV=1) HSP 1 Score: 620.5 bits (1599), Expect = 1.100e-174 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1
BLAST of Spo05038.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EBC1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g216450 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 1.200e-69 Identity = 159/312 (50.96%), Postives = 207/312 (66.35%), Query Frame = 1
BLAST of Spo05038.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QID3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175770 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 7.900e-8 Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05038.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 4
BLAST of Spo05038.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 3
BLAST of Spo05038.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo05038.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
RNA-Seq Expression
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