Spo05106 (gene) | SpinachBase

Overview


Name	Spo05106
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	SpoScf_00605 : 221596 .. 228763 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACCAACCTCGGCGATTGCCTTTCTATTTTCTCTAGTTTTTCACGAGTGTTTGAGGGATTGCAAAAACTTGAGGTATGAGGTATATGTCTATATTTATAGGGAAGGCATACAACAGGGTTATCAATTTGAGTAGTTAGATATTCTACGGAGATAAAGATGAGATTTCACGGTTAAGCTCTAGAATGATAGTCTTAGATAAATTATTTAGAGTTGGTTTGTTGAGAGTTTATCCTCCCTTGAATTTAGCTTGATACGAAAATAAGTTGCAAATGATAAGGATGCTTCAAAATCATATTTAATTCTATTTTTATTTTTATTATTTTTTTTTTAAAAAAAAGAAATAAACACGTGAGGTTTGTCAAGGAGTAAGTTGTGATACGGTGAGGATTATCCAAATTGTGATAGGACTTTATTTTTTTTGTAAAGGAGATGTGAGACCATAGACTACGGAGTTGACCTCTTTTTTATAAAAAAAAAACTAATATTATTTATATAAGGTTATAAATGTTAGTAAAACATGGGGTATTACAATTTTGATGTAATTTTTCAATTATTTCTAGTATTTCTAGTTTAGAACTTTAAGTTAGCATATTGAATGAAGTTCAAGACGATGCCAAGCTAACAAGGTGAAGAAGAATGGATGCTTCAAGACAAAGTTTTGGGCCATACTAGTTAGCATATATTGTGAATGAATGTATATTATGCATGAATGTTGTTTGTATGCTTGATTAGAATTAGTTCACTAAATAATCGAACCAACATAGAAACAACTAGGTCCAAAGTAATATTGAGGTTTAAAATTGCCTTCCAAATGAAGCACTTACAAAAATCTAAGGATCTAACGTAGTAGGTTTCAGCCAAAGCGATATGCTATTTTAGTTGACTTAGATGGTAAGGTATCCCAAAGGAACATGTTGATTGTGGTTTTAACTCAAACAACAATGGCATATGTTGTGGCAATGGGATAAATTTATTAACCAAGAGTAATTTGGAGATTACTACCAATAGGTTTTGCTTACCTAGAATCTCAAAAGACTTAAGACATGTCAAAGCTGCTTAAGGATTTATGACTTTTAGGGTCTTGGAAACGTTTCATTCATTTTGGACCATGTTTTGCATTTGCATGAATGAAATGTTTAATAGCTTTAATGATTGCATGTTAGAATTTATTTAAAAGTTATTAAGGATTATGAATGGTTATTTATTGCAAATTCTTTTCAAATGTAGTAATTAAATGGCCGCAAACAATAACAACTCGTTCAACCTACGTTCAATTCTCGACAAAGAGAAGTTGAACGGCAACAATTTCCTTGACTGGCAAAGGAAGTTGCAAATAGTTCTAATGCATGCGGAAAAAGAATATGTCCTTGAGGAAGAGTTACCAGAGGCCGCCGGGCCGGAGGTAACTCAAGCTGCCCTTAACCGTTTGATCCAGGACAACATGGATATCAAATGTGTGATGCTTGCATCCATGAATCCTGAACTTCAGAAAACGTTCATTAACTCGGAATCACTACAACGTAAACGAGCAAATGCAAGGGTTTATTGCAACGGTTAAAGCTAATGCAACAGGCAAGTGCAACGGTTAAAGCTATTGCAACGATCTAATGCAACGATTTAGATTATTGCAACAGGTAGTGCAACGGTTATATTTATCGGAACGGTCTTTTGCAACCGGTACCCGCACACCGTTGCAATAGCCCCTCAAATGCAACTATTGTTTTAGCTATTGCAACGGTATCACTACACCTGGAAAAGATATTTAAATTGACGAACAAATTGAGACTCATAGGAATTAAGAGTCCTCTTTCCAGAACCCTCTTTTCTGAATTCTTTCTCAGGCCCCAAACCCTCCCTTCCCCTTTTACCTAGTCCTCACTCCCATAGTTCAATTTCCAGCAGTCTCCACCACATCGCGTCCTCGTCTTCTGCTGTTCATTTTCTCTCATACAAGTTTGTTCCTTTTCTCTTCCCTCTTTAATTTGGTCGGTGTTAATTTTTAGTTTCCTAATATAATCTTCTATTCTCTCTCCTCAATCCATGTTCTCAAAGAATCACAGATTTACATGTCAATTGGTTTCATCGAGAGATTGAGACGGTATTCGTGGTATTTCTTATGATTTAAGTTTAATCGCAGGCATTGTAATTTCTTTTACCTTGCAGACGTAGATTGTAAGTTTATTTACTTTGCCATTAATTTGCAAAATCCATAATTTTTAGTTTCTTCATTTTTTGTCCTTATTCTTCTTCGCAGATCTGTTGTTTATCTTTAGTGATTTTGATTCAATATTTGGCATGATTGATTTCTTATTTTATTTGGGTAATTTATGGGTTCTTTTTATACTTTTGTTTTTACTTGATTAAAGAATCGGAAGGTAGCTCACGCTCTGTCTAACAATAGGTAATGCAATTTATTCTTTATTTTTTGTTGATGCTCATTCATCTCTATTCGAGTTTAATTCAGACTTGCGTATTTAGGGTTTATCTTTGAATTTGGGTAAATTGGTGGTTAAAGAGGATTTGAATAATTACACTTAATCGTGAAGTTTTGGTAAATTGATATTTGGTTCCTCCGATGAGAACAATTTTTCATCCGATTGAGTGATAACATGTAAATACACACGCATGACTACTCTTAAAGTAAAAACTAAGAAGTGTAATTTATTTGGATATTACTCCGTAATTGTTATTGCTTTTGAAAGTGCATGATTTCATGTTTGGAAATTAACTAGAGGGAACAATTAAATCATGTTATCTGTTAGTGGTGATAGTTTTGACCTCTGTTATGTCCTGGTTAGTGTGTCCCTAATATAGTACCTATCTTAATTTTTAGCTTGATTCAAGTCTTGCTTGTTAGCAACTGATTGCGCTTTATGCGATTGTGTTCAGCAAGTGATAGTGCTTGGGTATTTGATTAAGTTGCTTGCTTTGTTGGAGAATCAGATTAGTTTAAAGTGCGCGCAATAGCTGTGTTGGTATTCTGATCCTTAAGGACTAGCATAGGCCATCATTTGGAGTTTAAAGTGTCTATTTATCAAACTTACATTACAATCACATCTAAACCTTAAGCTAAAGTAATTAATGATAATTTTGTTTAATATTATTAGGATTAGCGTTTTAATTCCGTACATTATAATCTCATCCAATTTTTATGGCTAAGACAACATAACCATGTTTTCTTTCATATGAAATATAGGAAAAGGGCGTTGGTTCTTTACCTTGATTATTAATAAGAATGTTTTTCTCTTCGACTTAGTTGCATTGTTATATTACATGTAGTACTGCTATATGGATAATGGAACAATGAGCTAGCTTACCATGTACATAAATAATATTGTTGCTCTACTAGTCGTCGATTATCAATTCACGTGTAGTGTTAAATAAAACATTTTTTGTTGAAACCTGAGGATCATGAGAATCAAGTCCAATATGTCCTAGTTGTATAATAAACAAAAACTCAGTTTAATAAGTCCTATGTAATTGGTCTAGTTGTTTTTAGGCTCTGTTTGTGAGTCTGGGCAGTTTGTTCAGTTTTGTCATGAGGGTTGCCCCTTGGTCACTTCTGATTAGGTAAGAAGTGTTTACTTGTTGCAACTTGAAGCTAACTTGAAGCTACTATACTTTCACTATCTCATTCTTGTGGTTGTGTTTAATACCTGGTATTCACTATGATACATGAGTTGTTGAGTTGACTTCCCAAAACCTTGGAGGGTTCCCGCTCAAAATTAGTAGATTTAGTTGGTTAAGAAATTTATATAACTCTATATAACCTTGGAGGCTTCCGGAATGGTGTAACCGTACCTAACTTTTTGAAGTGAGAGTGGAGTACTTTTCATAGCATTTTTGAGAAATAATGGACTGTTATCAGGTCACTGCAAAGCTAGGAAAGTGGACTATTTATATTCTTAGTTGTATCTGGAGTTATAGTTGCTACTGGTTATGTATTGATGAAGGCAAGTGTGTTTTTACAAGGTTAAAGTTGATACTAATTGGTTCTTGTAAGTTAAAACACTTTTTGCTTGCTTCTTTTGACCTTTTGATAACAAAAATGCTTTTGGGGGCTGGAGGACCCTAGTAATAGGAGCAGATACAAACTAACACTACTCAGGGCCGGTGTAACCCCTGTGCAAGCTGGTCTACTGCACAGGGCCACCAATTGATAGGGGCCCCAAAAAAATCAACCTGTTTCTGATTCTTAGTATAACTTAAAATCGATCAGTTAATGGTGATGAAAAAACTCTCTCTCTTCCCAATATTTCTCGGTTTCCATGGCAATCAAACTAAACGCATTCGTATTGATTTATCAATTTCCAAAAAGCTTCAACTCTCTAAACCTAGCAATGTTTCTTGGCATAATACATGTAGTAGCAATCAAACAGGTGGGCTAGGTTTTAGAGATGTTGTTCTTTGGAACACTGCAAGCATGGGTAAATATGTGTGGGCTTTAGCTACCAAACAAGATAATGTTTGGGTTAGATGGGTGACTTCTGTGTATTTAAAGAATGGGGAATGGTGGGGATACCAGCCAGGCAATAGTGCAAGCTGGTATTGGAAGAAAATTTGTGAAGTGAAAGAAGTACTGAAGCAAGTCTATTCTGAGAATGAGTTTAGTAATATGCCTCACTACTCTATGAAACAGGTGTATGAGAAGTTAGCAGTTGATAAGACTAAGGTTCACTGGGACAAATTAGTGTGGAATAGGCTCAATACTCCTAAACATAGATTCATTGCTTGGCTTGCTATTCAGGCTAGACTGCAGACTACAGCTAAGCTTGCAAAAATAGCGATTAGTGCTTCTGCTACTTGCCTGATTTGTGGTCAGGGGGATGAGATTCATGATCACTTATTCTTCTGGTGTATTATAGTAACATGTGTCTGAAAGAAATGAAGAAGTGGTTGGGTTTTCAGTGTGGAAACAAATTGCAGCATATTTTCAGAAGCATCAGTCACAGTAGAAGGTCCAAGTTCAGAAAACAGGTTGTTTTTGCAACTGTTGTGGCTCTTGTGTACTTGATTTGGAGGTGCAGGAATACAAGTTAATGGGAGCAGCTTATCCCTTCTGTCAATAGTACAATCAGTAATTTGAAACAAGTTTTAAAAGCTAGAATTCAGGCAGTGTTGCCTAAGAGTGTTAGTAGGGCTGATAGCCACTGGTTTTTGGCTTTATAGGTAGTGTTGTGGTGTGTGTATGCCTATTGGCTAGTATGTTTGTGCTAGTTCCTTGGTGAGATGGTCCAACCTAGTTGGTTTGTCTCTCTTGGTTCTAGTTTAGCTTGTATCTTGGTTTGAGCTTAATAATATTATTCTCTCTTGCTTAGCAAAAAAAAAAAAAAAAAAGCTTCAACTGATTTAATGCATTCGTATTGGAAAAAGTGAAGAAAATCTCCATCTCCCATCTTCAACTAACCCATTATTTATCAATTGTTAGTAGGATAGATTTCCATCTTCAATCTCATAAGTTTTTTTTAAATCCACGTTTATCTACAAGTTGAGGCTAATCTGTCACTATTATGATGGGTTTTATGAGGGAGGTTATGACTAATGTATCTTCTGCAAATTCATCCTTCATATGTTAACTTTAAGTCGCCCGGTTATTCAAACCGTGTATGTAAATTCGAGAATGGTTTTCGGTGGCTTGGGTTCGCAATTATTATGGCTTGAAAGAGGTAATCGACAATGTTAAATATCTGGTATTTTAATGAGGTTTTTTCCATCCTTAAATTTCCACATTACTTTTACTGCTTACAATGTATTTAATTGTGTTTTGGTTTAATATTATTTTTGCTTATGAAGTTGCAAGGACATTTGAAATAAAAACAAAATCTATAGGTGTATACTAGATTACGTGGTTTTTTAATTATAAAAATTGCTATAGGGCCTAATTTTTTTTAACTAGAACAGGGCCTCCTAATTTGTTGAGACGGCCCTAACACTACTACAAAAACCTTACTTTCTAGACGCTTGGAGCTGGACGCTTGGGAACAGGTGTTGGGGGGAAAATAAATTTCTCCACTTTGAATGGTGGTCACAAATGGGAGATTTGTACATGTATAAGTATCATGTCATTTATCTTATAGTATTTCTGTATTCGTAGATCATGGATTTAAAATTTGAAATTTCCTTCATTTGCTACTCTGTTCTTAAGTGGATATTAGCATTGTCGCATTATATTCTGGTTTATCCACGACTTTGAAGGATATAACACCAAAACTTTATTTTCTTGAATGTTTCTTTACTCTATAGTGAAATTATATTTAATTAGTAATCATGTACTTAGTGCAGACCTTGATTTAGGTGCTTTCCAGAACTAAAACTACTCATGCATAGTTCTAAGTATAAACACATTGCACGGTGATGTATTGATTATGTTTCTTTTACATTTTCACAAAAATCTGTTTAAAAATTGTTTCCTTCTGATAAATATTAAGGCATGATATTTTGTAATGTAGTGCTAACCTTCTAGGCGCTTAAAAGCGAAAACTAGAAAGTCATTTGAAAGCTCATCCTTTTGATTCTAATGAAGTTAGATATACTTGATCTGAAAAATTTAATTGTACGGTTCATTTGTTGTTTTTATTATTTTTTGTCTCTAGGGTTGGATAACTTGATATTTTTGTTTCATTTGTTATCAATATTTTTGGTTGAATTGCCAATGATGTGTTTATTAATAGGTATCAAAGAAGAATCTTGACTATTTTAGTTCTTGCTAATGGTGTGTTTGATGATGATTGATTGGGGCAGTGGATTCATGGATTTGTTTAGTTGGCAATAAGAATTATTTTCTTGAAGTGATCATGATCGTTGTAGATAAAGAAAAATTGTTCACTGATGATTTCCTAAATGTTTGAATCTACAGGATCAACAACCAAATTGATTGGACAAAAAGGAATTGAATTACTTTATTGGGATTAAAATTGTTTGGTGGTGGGCCTCAAAAACAAGTGTTAAACACTTAGAATTATTTAGCTTCTTCCATAAATATGTTATACAGATTATTTTAGTTTTGATGCAAATATTACTTATACAATTAAGTATTACTCAAGTTCGAAGTACTTCATTTTGTAAATTGTCAATAACAATTGCGCGATAATGTACATATTTTTGGATAATATTAGAAACATTGAAAATTTTATCACCCTTCATTTGTATTTATCTTTTGGCC

mRNA sequence

ATGGGAACCAACCTCGGCGATTGCCTTTCTATTTTCTCTAGTTTTTCACGAGTGTTTGAGGGATTGCAAAAACTTGAGTTTCCTAATATAATCTTCTATTCTCTCTCCTCAATCCATGTTCTCAAAGAATCACAGATTTACATGTCAATTGGTTTCATCGAGAGATTGAGACGGATCAACAACCAAATTGATTGGACAAAAAGGAATTGAATTACTTTATTGGGATTAAAATTGTTTGGTGGTGGGCCTCAAAAACAAGTGTTAAACACTTAGAATTATTTAGCTTCTTCCATAAATATGTTATACAGATTATTTTAGTTTTGATGCAAATATTACTTATACAATTAAGTATTACTCAAGTTCGAAGTACTTCATTTTGTAAATTGTCAATAACAATTGCGCGATAATGTACATATTTTTGGATAATATTAGAAACATTGAAAATTTTATCACCCTTCATTTGTATTTATCTTTTGGCC

Coding sequence (CDS)

ATGGGAACCAACCTCGGCGATTGCCTTTCTATTTTCTCTAGTTTTTCACGAGTGTTTGAGGGATTGCAAAAACTTGAGTTTCCTAATATAATCTTCTATTCTCTCTCCTCAATCCATGTTCTCAAAGAATCACAGATTTACATGTCAATTGGTTTCATCGAGAGATTGAGACGGATCAACAACCAAATTGATTGGACAAAAAGGAATTGA

Protein sequence

MGTNLGDCLSIFSSFSRVFEGLQKLEFPNIIFYSLSSIHVLKESQIYMSIGFIERLRRINNQIDWTKRN

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo05106.1	Spo05106.1	mRNA

Homology

The following BLAST results are available for this feature:

BLAST of Spo05106.1 vs. NCBI nr
BLAST of Spo05106.1 vs. UniProtKB/TrEMBL
BLAST of Spo05106.1 vs. ExPASy Swiss-Prot
BLAST of Spo05106.1 vs. TAIR (Arabidopsis)

BLAST of Spo05106.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo05106.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo05106.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo05106.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048657	anther wall tapetum cell differentiation
biological_process	GO:0000271	polysaccharide biosynthetic process
biological_process	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0048767	root hair elongation
biological_process	GO:0010224	response to UV-B
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:1900140	regulation of seedling development
biological_process	GO:0010817	regulation of hormone levels
biological_process	GO:0009911	positive regulation of flower development
biological_process	GO:0002237	response to molecule of bacterial origin
biological_process	GO:0010584	pollen exine formation
biological_process	GO:0060548	negative regulation of cell death
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0048366	leaf development
biological_process	GO:0009729	detection of brassinosteroid stimulus
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0071555	cell wall organization
biological_process	GO:0009932	cell tip growth
biological_process	GO:0009742	brassinosteroid mediated signaling pathway
biological_process	GO:0018108	peptidyl-tyrosine phosphorylation
cellular_component	GO:0032991	protein-containing complex
cellular_component	GO:0010008	endosome membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0005496	steroid binding
molecular_function	GO:0004714	transmembrane receptor protein tyrosine kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo10923	0.69	Barchart \| Table
Spo16911	0.68	Barchart \| Table
Spo16691	0.68	Barchart \| Table
Spo17498	0.68	Barchart \| Table
Spo24549	0.67	Barchart \| Table
Spo09350	0.67	Barchart \| Table
Spo17211	0.67	Barchart \| Table
Spo27004	0.67	Barchart \| Table
Spo17220	0.67	Barchart \| Table
Spo00486	0.66	Barchart \| Table
Spo01809	0.66	Barchart \| Table
Spo02749	0.66	Barchart \| Table
Spo06574	0.66	Barchart \| Table
Spo13131	0.66	Barchart \| Table
Spo26789	0.66	Barchart \| Table
Spo13899	0.65	Barchart \| Table
Spo27198	0.65	Barchart \| Table
Spo01840	0.65	Barchart \| Table
Spo22255	0.65	Barchart \| Table