Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTAAAACTTCCACGATCTCTGCTGCAAGCCTTTGATTACTATATCTCTGTGTGGCCATATTACTTCCACGATATCTACTTCTTCAGCGTTGATTAAGAACAACACCATCCAACAGCTCTCCTTCTCTCTCCTCCATTTTGCCAAATTTTATTTACACTTTTGAGTAAACTCTGGAAATATCCCGCCTTTTCTCTCTCTTACAAACAACAACAAAAAGAAAAACAGAGAAGAAAGAAGAAGGAAAACTAGAGAAGAAAAGAAAGTTTTATTTTTTAATAATAAAACTTAATTAATTGCTTAAAAAATAATTTTATTTAATTAATCTATTATTGAAAAGGGTGGGAAAATGCAAGAACAAGCTACAACAAGTGCTACTTCTGCTGCTGCAAACTCTTTGCCTTCTAGCAGTGAGAGATCTTCTGGTTCTGCCCTTCAATTTGATATAAAAGAAGGTATCTTTAATTTTTGTGATTTTCAATTCATTGTTGAAAAGTAAGATTTTTCTGTCATGGGTAGTTTGGAAATTTGGTTGATTTGATTTTTTATTTGGGAATTTCGAGGAAGTTTTTGATTTTTTTTAGGCGTAAGTCGTGACCCGTGATGTAGATGAAATTTGATCACATATTCACATGTCAAGTAAATAATAACGTACTGTTATTACACGGTTAATTTATTTCTTAGTTTGAGTTTTCCAAGCTGGAAGCTTTTCAGTAAAGTTATGAATTTTCTTATGTAATACGGAGTAAGATTTTAACATTTTGAATTTTGCTTATGTTATGAAAAGAATTTCGCGGAGTCTTTGTATTTTTCCAACTAGAGAGAAAGAGAGGAGGAAAGGGAGATGGGTGTTGACACTTGACAGGGATTCGATCATAGGTTTATTTTTAGTAATTGGATAGTAAAATTATCAATTTGTCTTTCCAAAGGTGGAATCTTTTATTTTATTACAGTTTTATGATTTCTGTCTTACGTAATTAGTGCAAAATTAAAGAAATTGATGTTTTATCTTGGAAGGATTTGTCTTTATTTAGAAATTTGAAGTGCAGTAGAGTAGAAAATTTCCTGCGGAAATATCGGGATTATCTCAATTGGGTAGATCATATTTTCCAGGGAAAACGCTCATTTTCATTAATCATTATATCTTGGAAATTAGAGCATAATTTATTTCAACAAAATTTATACTGTTTTTATTGTGTATTATGATGAAGGGATGGAGAGTGATGATGAAATCCGGAGAGTACCGGAGATGGGAGGTGAACCAGGAGTAAATTCCGCTTCCGGCCGCGACACTGGATCTGCGGCTGGTCCTGACCGTGTTCAAGCATCAGGACAGAGCCAAAGGAAAAGGGGTAGAAGCCCTGCTGACAAAGAAAGCAAACGTTTGAAGAGGTAAAAAAGCTGTTGCATTTTACTTTCATTATTTCCACTTTGGTAAAAAAAAAAAAAAAAACATTTTCCCACTAACTAGTTGATAAAACTCATAAAGTCCATTTCGGACCTATTAATTGAATAGGCGGGATCGGGATAAGTAATATTGGGGCGGGTTTTAGCGCTCCACTAAACTAATTGTTTATGTTAGTGATGATGATTAAAAGTGGGAATTGCTTTGATGGGGCAGGTTGTTGAGGAATAGAGTATCAGCTCAACAAGCAAGAGAGAGAAAGAAGGCATATTTGAGTGATTTGGAGACAAGAGTTAAAGACTTGGAGAACAAAAACTCTGAGTTGGAGGAAAGACTTTCTACTCTTCAAAATGAGAATCAGATGCTTAGACATGTAAGTTTCATTATTTGCACTATGTGTTTTCATGATAATGCCCACATTATTGGTCACTAACACAGTGCGTCAGTGCCTATTATACACTTAACTCTTCAAATGTGAATAATGCCTTTTAACATGGAGTAGTTTGGAACAAAGTGAGTTGTTTCTGGAAGTTGCATATTTACAGTTATTCTTATTGTCATCTAACAGAATGTGGTCAGCGTCATCTCTTGAGTCATGATTCATGATTCTCATCCCCCCTCACACAATATTTGTGACATTGATGTATTATGGTTACACTATGGAATAATATATACTTCACTTCATATGTACTTTTAGGTGCACTACTTTAACTTTCACGCATATCAACACACACCTTTGATCATTATCTAATTATTCATTAGTAAAAGTTGCAAGTATACACTCAGACTAATCTAACAAGTAACAACATTTATGTTTGGAGTAATAACATTTGTTTGTACATCCCTCGTATTAGTACCAACACTTTCTCAAAGTTAATGAATAGCGGTGTAAAGGTAAAAGAGTTGCAACTAAAAACACGGAGGACTTATGTCTAATACTCAGAACAAAGTTCTGAATCAACAAGAGTTCGTAGAACGAAGAGAGTGTACAACTGGGGTAAACGTCAAGAGATAGGGGTAGTAAGTGGTAACCTTCGTACGCTGGGATGTGGAGCGTTAGGATACCTATCTCAGTTTCTAGATAAAAGAGTTCAATTAAGTTAGGATAACCTCAAAACGCCCTTCTATATGTCAAGAAATATATAAAATAGCCGATTAAGACAAAAGGCCAAATATTCACATGTTAAAATGTCTTTTTCTGATATGAGATCTTCATTTATGGGGCCCACTAGCCCATAATCAACTACTTCGTATTTTATTTTATCGTTGCCTTAATGCCTTGATTGTATTGATTTATCACATGGATTCAATGAATTTTTCATGTTGGGTTGGCTAAGTTTTGCACAATACTTGTAGTTCAATTTGCTTTCTTTGTTCTATGTGCGGTGGGATAGGGTTAGATCTTTGGCTATTCTATGCACTTTGGCAGTAGTGCAGCTTGGCTGTATACAACTTGCAATATAATGTTAAATGGTCACAAATCAGGGATGTTTATTACTTTTCCATATCTATATGTTGGTTTACGCATATAACTTGCATAATTTAGCAACTACTAAAGATACACGGTCCTGTGTATGCACGTTAGCCTTTCTAATTCTTGTACTGCTATGATTTTCAACTTCTCCCACGTTGATAGTAAAGCACTTGATACACATTGATACCTTAAGTGTGATGCTATTACAGTAGTTTTTTCTTTTATTGCTGCTTCTGATTGGTGAGGACTGTGTAAGAGCCGACTCTTGTTAGTGAACGTCATTTGTAACAATTCATTGGATGTATGAATGGCCTGGACATTAGTGTATTCGATTGGTTTATGAGGAGGATTAGGATTATTGAGCACATGGGCCATATAGCCATATGGCTATGCTCTCTTTAATCTTTAGATGATAAACACCTTTATCATAACTTATTAAGCCTTGTGCTCTTACTAATGAAGTTAAGAACAAACCAACTGTAATGTGATTTTTACCTGCTTTTTTGGATAACGTGATTGTGCTCATCAATATCAGATAAATGACAGTTCTTCCCCGTAGAGATTTTTCTCATGCCCTTGTGGTTATGATATGCAGATACTGAAGAACACAACGTCAGGTCGCAGAGGAGGTGGTTCTAATGGTGATGCATCCTAATGACATTACGAAACAATACAACCTTGACCATTAAGTCGCCCTAATTCAGATTTCAAAAAGGGTTTGGCATCAAAAAAGTTTGAAGATATTGTATTAGGCTATGTTTGACACACCAGCTTGTAGGAGTATTTTTCTGTTGAAGTTGGGTGTGAGTAGCTTTTGCAACGCTTGGGGCTACTTCTTGGAAATTAGGATGCTTCGCTCTGTTGCCTGTGGCGAATGTTCGCCTTGGCTTGAATGTTTGATGCGGCAGTTAAACACATGCACCAACGATGTTGAACATTGGTCTGGGATGCTCAGGGCGGCGAGGATATACACTAACACAGTAACACTGAGAAAGGGTCTGAACTCTGAGGACTTGAGGAGTATGATTCATAAAGATGTTCATTTTCTAACGTAAGGTAATCAAGGGCGTTCCTACGGGCATGTCTTGTACTGGAAATTTCTCCCAAATGGTATGGAGATTCTCAATTGAGTCGATGTGATATTATGTGAATTATTTTGCAACATTCAAAGTGTTAACAAACAAATGTATGAGATATTTCCCTTCATAATATGAGAACTCCAAACCATCTAGTATATGGTCTGTAAATATACCAGTAACAATAACCCGTTAGTTCCAAAATGATTTGGGTTCGGCTAATATGAATCGTCATTAGAGATCGTTATTCCTCAATCAATCCTTTTTTGTATGCCCGCCCATCCAACGTGACATGCGCATCTCTGCCACATTTATCATATACACGTGACAATGTTTCACTGCCCAGAATTCCACGTATAACGACGGTTAATTGTCGTGCGGTAGAATTTGCTCTTCAATCTTGGGACATGCCTGTATCACATAGGAATCCCGTGACACTTTCCACTTCAACCAACATGCTTTGATTCTATGTGCCACATCACCATTCAATTATCCATCATTTTGGATAATAGATCCTAAATAGCGGGAG TCTAAAACTTCCACGATCTCTGCTGCAAGCCTTTGATTACTATATCTCTGTGTGGCCATATTACTTCCACGATATCTACTTCTTCAGCGTTGATTAAGAACAACACCATCCAACAGCTCTCCTTCTCTCTCCTCCATTTTGCCAAATTTTATTTACACTTTTGAGTAAACTCTGGAAATATCCCGCCTTTTCTCTCTCTTACAAACAACAACAAAAAGAAAAACAGAGAAGAAAGAAGAAGGAAAACTAGAGAAGAAAAGAAAGTTTTATTTTTTAATAATAAAACTTAATTAATTGCTTAAAAAATAATTTTATTTAATTAATCTATTATTGAAAAGGGTGGGAAAATGCAAGAACAAGCTACAACAAGTGCTACTTCTGCTGCTGCAAACTCTTTGCCTTCTAGCAGTGAGAGATCTTCTGGTTCTGCCCTTCAATTTGATATAAAAGAAGGGATGGAGAGTGATGATGAAATCCGGAGAGTACCGGAGATGGGAGGTGAACCAGGAGTAAATTCCGCTTCCGGCCGCGACACTGGATCTGCGGCTGGTCCTGACCGTGTTCAAGCATCAGGACAGAGCCAAAGGAAAAGGGGTAGAAGCCCTGCTGACAAAGAAAGCAAACGTTTGAAGAGGTTGTTGAGGAATAGAGTATCAGCTCAACAAGCAAGAGAGAGAAAGAAGGCATATTTGAGTGATTTGGAGACAAGAGTTAAAGACTTGGAGAACAAAAACTCTGAGTTGGAGGAAAGACTTTCTACTCTTCAAAATGAGAATCAGATGCTTAGACATATACTGAAGAACACAACGTCAGGTCGCAGAGGAGGTGGTTCTAATGGTGATGCATCCTAATGACATTACGAAACAATACAACCTTGACCATTAAGTCGCCCTAATTCAGATTTCAAAAAGGGTTTGGCATCAAAAAAGTTTGAAGATATTGTATTAGGCTATGTTTGACACACCAGCTTGTAGGAGTATTTTTCTGTTGAAGTTGGGTGTGAGTAGCTTTTGCAACGCTTGGGGCTACTTCTTGGAAATTAGGATGCTTCGCTCTGTTGCCTGTGGCGAATGTTCGCCTTGGCTTGAATGTTTGATGCGGCAGTTAAACACATGCACCAACGATGTTGAACATTGGTCTGGGATGCTCAGGGCGGCGAGGATATACACTAACACAGTAACACTGAGAAAGGGTCTGAACTCTGAGGACTTGAGGAGTATGATTCATAAAGATGTTCATTTTCTAACGTAAGGTAATCAAGGGCGTTCCTACGGGCATGTCTTGTACTGGAAATTTCTCCCAAATGGTATGGAGATTCTCAATTGAGTCGATGTGATATTATGTGAATTATTTTGCAACATTCAAAGTGTTAACAAACAAATGTATGAGATATTTCCCTTCATAATATGAGAACTCCAAACCATCTAGTATATGGTCTGTAAATATACCAGTAACAATAACCCGTTAGTTCCAAAATGATTTGGGTTCGGCTAATATGAATCGTCATTAGAGATCGTTATTCCTCAATCAATCCTTTTTTGTATGCCCGCCCATCCAACGTGACATGCGCATCTCTGCCACATTTATCATATACACGTGACAATGTTTCACTGCCCAGAATTCCACGTATAACGACGGTTAATTGTCGTGCGGTAGAATTTGCTCTTCAATCTTGGGACATGCCTGTATCACATAGGAATCCCGTGACACTTTCCACTTCAACCAACATGCTTTGATTCTATGTGCCACATCACCATTCAATTATCCATCATTTTGGATAATAGATCCTAAATAGCGGGAG ATGCAAGAACAAGCTACAACAAGTGCTACTTCTGCTGCTGCAAACTCTTTGCCTTCTAGCAGTGAGAGATCTTCTGGTTCTGCCCTTCAATTTGATATAAAAGAAGGGATGGAGAGTGATGATGAAATCCGGAGAGTACCGGAGATGGGAGGTGAACCAGGAGTAAATTCCGCTTCCGGCCGCGACACTGGATCTGCGGCTGGTCCTGACCGTGTTCAAGCATCAGGACAGAGCCAAAGGAAAAGGGGTAGAAGCCCTGCTGACAAAGAAAGCAAACGTTTGAAGAGGTTGTTGAGGAATAGAGTATCAGCTCAACAAGCAAGAGAGAGAAAGAAGGCATATTTGAGTGATTTGGAGACAAGAGTTAAAGACTTGGAGAACAAAAACTCTGAGTTGGAGGAAAGACTTTCTACTCTTCAAAATGAGAATCAGATGCTTAGACATATACTGAAGAACACAACGTCAGGTCGCAGAGGAGGTGGTTCTAATGGTGATGCATCCTAA MQEQATTSATSAAANSLPSSSERSSGSALQFDIKEGMESDDEIRRVPEMGGEPGVNSASGRDTGSAAGPDRVQASGQSQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLSDLETRVKDLENKNSELEERLSTLQNENQMLRHILKNTTSGRRGGGSNGDAS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05151.1 vs. NCBI nr
Match: gi|902208689|gb|KNA16013.1| (hypothetical protein SOVF_093050 [Spinacia oleracea]) HSP 1 Score: 292.7 bits (748), Expect = 4.000e-76 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of Spo05151.1 vs. NCBI nr
Match: gi|731320150|ref|XP_010670652.1| (PREDICTED: transcription factor HY5 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 270.0 bits (689), Expect = 2.800e-69 Identity = 154/167 (92.22%), Postives = 160/167 (95.81%), Query Frame = 1
BLAST of Spo05151.1 vs. NCBI nr
Match: gi|1009137072|ref|XP_015885857.1| (PREDICTED: transcription factor HY5 [Ziziphus jujuba]) HSP 1 Score: 233.4 bits (594), Expect = 2.900e-58 Identity = 135/166 (81.33%), Postives = 150/166 (90.36%), Query Frame = 1
BLAST of Spo05151.1 vs. NCBI nr
Match: gi|702301192|ref|XP_010048982.1| (PREDICTED: transcription factor HY5 [Eucalyptus grandis]) HSP 1 Score: 226.1 bits (575), Expect = 4.600e-56 Identity = 137/170 (80.59%), Postives = 149/170 (87.65%), Query Frame = 1
BLAST of Spo05151.1 vs. NCBI nr
Match: gi|596298627|ref|XP_007227524.1| (hypothetical protein PRUPE_ppa012064mg [Prunus persica]) HSP 1 Score: 225.3 bits (573), Expect = 7.800e-56 Identity = 133/166 (80.12%), Postives = 144/166 (86.75%), Query Frame = 1
BLAST of Spo05151.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R8Y5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093050 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 2.800e-76 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of Spo05151.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CXG8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g042860 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 1.900e-69 Identity = 154/167 (92.22%), Postives = 160/167 (95.81%), Query Frame = 1
BLAST of Spo05151.1 vs. UniProtKB/TrEMBL
Match: A0A059CSL1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02802 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 3.200e-56 Identity = 137/170 (80.59%), Postives = 149/170 (87.65%), Query Frame = 1
BLAST of Spo05151.1 vs. UniProtKB/TrEMBL
Match: M5Y329_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012064mg PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 5.400e-56 Identity = 133/166 (80.12%), Postives = 144/166 (86.75%), Query Frame = 1
BLAST of Spo05151.1 vs. UniProtKB/TrEMBL
Match: A0A023VWG8_BETPL (Transcription factor HY5 OS=Betula platyphylla PE=2 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 7.100e-56 Identity = 133/167 (79.64%), Postives = 147/167 (88.02%), Query Frame = 1
BLAST of Spo05151.1 vs. ExPASy Swiss-Prot
Match: HY5_ARATH (Transcription factor HY5 OS=Arabidopsis thaliana GN=HY5 PE=1 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.600e-53 Identity = 130/170 (76.47%), Postives = 145/170 (85.29%), Query Frame = 1
BLAST of Spo05151.1 vs. ExPASy Swiss-Prot
Match: HY5_SOLLC (Transcription factor HY5 OS=Solanum lycopersicum GN=HY5 PE=2 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 2.900e-50 Identity = 126/161 (78.26%), Postives = 137/161 (85.09%), Query Frame = 1
BLAST of Spo05151.1 vs. ExPASy Swiss-Prot
Match: HYH_ARATH (Transcription factor HY5-like OS=Arabidopsis thaliana GN=HYH PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.500e-19 Identity = 69/139 (49.64%), Postives = 92/139 (66.19%), Query Frame = 1
BLAST of Spo05151.1 vs. TAIR (Arabidopsis)
Match: AT5G11260.1 (Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 210.3 bits (534), Expect = 9.100e-55 Identity = 130/170 (76.47%), Postives = 145/170 (85.29%), Query Frame = 1
BLAST of Spo05151.1 vs. TAIR (Arabidopsis)
Match: AT3G17609.2 (HY5-homolog) HSP 1 Score: 95.9 bits (237), Expect = 2.500e-20 Identity = 69/139 (49.64%), Postives = 92/139 (66.19%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05151.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05151.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05151.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo05151.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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