Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCACTATAAATAGAAACTTGGTGAAGCCATGCATTGCGAACCATAAACTTCTTTTATCTACTACACTCAAGGTATACTCTATTTCTTTCCTCTGAATTGCGGCTTCTTTTGCTCTAAAATATTTTTTTTCCTAATGAAAAAGTCATTTCACTTTAAATAATTTTCAACGGAAAATATATTGTAAAATATTTTTCATTTGTTACTAGCTTAAGTTATGGAGAAAACAAAAAACGAAGGAGGGAAATGTTATACTTCGTCTTTTCAAATTGCAAATGTTTTTCACCATTGAAATGCTACTTTCCACCTTTTGGAAAATAATTTTTTTCCCCACACTCATATTAACAAATCAAACAAAGGAAAATATGGGAAACATATTTTCTAGTCAAAGCAAATTGAGCCTAAATCCATATCTTTTTTCTCCTCCTCTATCTTACAGTAACCGGTTGTTATTTTGTTTGTAGTTAATTATAAAACTTTGTTTTGTTCACCTTATTTCCACTCATTTCAGGAAAAATCAGTTCAGATAAGTTCAGACAAGATAAGTTCGGGAAAAATAAGTGACAATGAAGTTAATAGAACACACTCTAAATGGGATAATAATTATTAATGTGTAATTTCTAGCTCTTGAAGTGCTCTACTGACTCAACTTTGGTTGATTTTGTAGCTTTTCGAAGAAGAAACATTTAAGCTAACATAACAATAATGGCTTCGGTGCAACAAGCTCAAGTGGATAGCAAATTCAATGACAAGCAGAAAGCGGCAATCGGAAAGGCTATGCAGGATGCCCAAAGTATCCTAGCCAACAACGAAAAGGACGGGCAACATCAGTTGGCTGTTGTAGGAGGTGTTATGCAGAATCTCCAGCGTAGGGTAATAGTGCTTAAGAAAACCCATGACGCTGAGGGACGATTCTTAACTAACCCTCCTGGTTCAATTGGTGGAGAAGGCCATGGTGCATTTGTGCACCAAGGTGCTACTTCTCAAGGACCACTTCCAGTGGTTGTAGGCTCCAAGTGCGCAATCATATATGGTACCATTGATAAGATGGCTCCTGCTCTTGGATATCTCTTGGCTTGGAATAGGCCCGATGATGCCAATCAAGACAGCAAGGTAATTCATAAATGACGTATACACATATATTATATTATATACACATTACCTCTATTTCATAATGATCTTTACAGTTACTTTTTGCATCAATAGTAAGATGTGTAGAGGTGGTTGAAATAAAATATGGATAAAATAGGAGAAAAACAATATTAAAAGGTGTGTAGGGGTAAGAAAATGGGTTATTCAAGATCAATAATTGTTATTGATGAATAGTATAATTCACATGGCATAAGCAAAAAGTATATTTATTTAATTAAGCTTAAATTTTATTTATTTAACTCACTTTTTATTCTTTTTCCTTACCGAATTAATTATGAAAATGACATGTTATTTGTATTATTCACAAATCATAGTTGTAGATTTTCATTTTCCTAAGAAAATAATGAATAAAGTGAGAGAAAATGAGTGGAAAGATGTAAATTTTGTGGGGTAGAGGGGTAATATAATACATTTTCATGTCCAAAATAATATAAAGCACAATGTAAAGAATATTATGTAACGGACTAAAACATAAAATGTAAAGATGGTTATGAAAGTGAGGTAATAATTCATTATGAGACGGAGAGATTATACAATTACACATATGGAGAATACAAGACACAAATACACAATGCGTGTAATACGTGTATGTGTGAAGGGATAAATAAACGAAATAATTGGGAGGCTACATTGTGACGCAGGTGTATGTGGAAGCTGGGAGTCAATACAATCTGGAGAAAATGGAGTGGAGTGAAATAGAAAAGAAACTTGATGCATCAACCAACAAAAGTCAGTTCATTGACCACGAGACAGGTGCTACAGCCACTGCTGAAATTAAGGACAATGGCAACAAACGGGCTTTGGTTGCTGCTAGTTTCGATCGCATTACAATTGGGATCCCCATCCCCAACTGAGTGCAGTATAAGTATAACACACCTAAGGGGCACTTAATACTTTAATTATATAACCTGCCTTTTCTATTATGCAACTGTTATCATGTTTACGTATATGCTTATATGTTTAAATAAAGCCCCTTGGATTTGTAATATTAAATTGTGGAATCTAATACTATCATTATTATCTATATATGTTCATCAGGTTCGTCTCTATCACTTCCTTATTATTATTATTATTATTACTTTTTTCTCGTGTCATGTATGAGTCTAAACTAATAAAAAGTAAGATTTATAAATTGTATATTTTAATATTTATAAGGAGTATAAGTCGGCACTTAAACACTTTCTGTGTCCACATAAAATATCGTTAAACTATATGCTTAAGCGCTTAACATTCGTAGACTCGACCCCATCAAGATTTCAATTCCACTGTTCTTCAATGTTAAAGCAACTTAGAATGCTGGACAATTCATTTGTCCAAAAATCTAATAAGAATCTTGCTCATGGGCTCACCCATGTAGGGATGGGAGAAAAAATTATAATTAAGGGAGGGATTTATTAATAGGAAAATTTGCCACTTACAATCCAAAAAAATTTACACTTTGCGAATTACAACCTTAAACTTTCAGTTTTGCGAATTACAACCTCAAACTTAATCTCGTACTTTAAATTATAACCTGAGATCATATTCCGGCAAAAACTATCGGATTAATTATGATGTCATTATTATATTTTAAACCTAATTAATAATTTCAAAAATATAAAAAAACCATAATCAGAAATTAAAAAATAAAATAATCCCCAACATACATTGTACTTTCACGGCATTCTCCCTAATTACAACCCTATAATTTTCTCTTCTTTATTCTCTATGTATTTGTTAATCTTCTACGTACAAACATCAATGACACCCCTCAAATAGCGATAGTGATGCCTTTTCTCTCCTCTGCATAATCAACAATCAGAAGCTAATTGAACAATCATAAATTACACTCAATTACTCCACAATTTAACAATGAAATCCCTAATTTACACACAATTTTTGAATAATCCCCAATTGAAGAACCCTAATTTTCGATAAAACCCCAATCCAAGAACCATAATTTTCAATTAATCCCCTACCGAAAACCCCCCAATTGAAGAACATAATTTCGAAAAACCCCCAATTGAAAAACCCTAATTTCTGAAAACCCCCAATTCGAAGAACCCTAGATTTCAACAAAACCCAATTTAAGTGTCAATTTATGTTTCGAAACCCCCAATTCAACTATGATAGGAAACAGAGAGAAAATTGAGGGAAGAGTTGAAGAGAGAAATTACATGTCATCATTGTTGAAGCTTCCAGCCTTCAACCTGTAATGGTGTCCTCTTATGTTGAAAAAATATATAGAGAGATATATCACACTGAAAGAGCATCGAGGGAGTATTTATGGAAATGTTAGCATTGAAGCTTTGAAGTTGAAAAGATGATTTTTTGGGGAGGGAGAGGAGTGCAGAAGTTAATGGTAGGAAAAAATTGTAATCGAAATGATAGTGAATGGA CCCACTATAAATAGAAACTTGGTGAAGCCATGCATTGCGAACCATAAACTTCTTTTATCTACTACACTCAAGGTATACTCTATTTCTTTCCTCTGAATTGCGGCTTCTTTTGCTCTAAAATATTTTTTTTCCTAATGAAAAAGTCATTTCACTTTAAATAATTTTCAACGGAAAATATATTGTAAAATATTTTTCATTTGTTACTAGCTTAAGTTATGGAGAAAACAAAAAACGAAGGAGGGAAATGTTATACTTCGTCTTTTCAAATTGCAAATGTTTTTCACCATTGAAATGCTACTTTCCACCTTTTGGAAAATAATTTTTTTCCCCACACTCATATTAACAAATCAAACAAAGGAAAATATGGGAAACATATTTTCTAGTCAAAGCAAATTGAGCCTAAATCCATATCTTTTTTCTCCTCCTCTATCTTACAGTAACCGGTTGTTATTTTGTTTGTAGTTAATTATAAAACTTTGTTTTGTTCACCTTATTTCCACTCATTTCAGGAAAAATCAGTTCAGATAAGTTCAGACAAGATAAGTTCGGGAAAAATAAGTGACAATGAAGTTAATAGAACACACTCTAAATGGGATAATAATTATTAATGTGTAATTTCTAGCTCTTGAAGTGCTCTACTGACTCAACTTTGGTTGATTTTGTAGCTTTTCGAAGAAGAAACATTTAAGCTAACATAACAATAATGGCTTCGGTGCAACAAGCTCAAGTGGATAGCAAATTCAATGACAAGCAGAAAGCGGCAATCGGAAAGGCTATGCAGGATGCCCAAAGTATCCTAGCCAACAACGAAAAGGACGGGCAACATCAGTTGGCTGTTGTAGGAGGTGTTATGCAGAATCTCCAGCGTAGGGTAATAGTGCTTAAGAAAACCCATGACGCTGAGGGACGATTCTTAACTAACCCTCCTGGTTCAATTGGTGGAGAAGGCCATGGTGCATTTGTGCACCAAGGTGCTACTTCTCAAGGACCACTTCCAGTGGTTGTAGGCTCCAAGTGCGCAATCATATATGGTACCATTGATAAGATGGCTCCTGCTCTTGGATATCTCTTGGCTTGGAATAGGCCCGATGATGCCAATCAAGACAGCAAGGTGTATGTGGAAGCTGGGAGTCAATACAATCTGGAGAAAATGGAGTGGAGTGAAATAGAAAAGAAACTTGATGCATCAACCAACAAAAGTCAGTTCATTGACCACGAGACAGGTGCTACAGCCACTGCTGAAATTAAGGACAATGGCAACAAACGGGCTTTGGTTGCTGCTAGTTTCGATCGCATTACAATTGGGATCCCCATCCCCAACTGAGTGCAGTATAAGTATAACACACCTAAGGGGCACTTAATACTTTAATTATATAACCTGCCTTTTCTATTATGCAACTGTTATCATGTTTACGTATATGCTTATATGTTTAAATAAAGCCCCTTGGATTTGTAATATTAAATTGTGGAATCTAATACTATCATTATTATCTATATATGTTCATCAGGTTCGTCTCTATCACTTCCTTATTATTATTATTATTATTACTTTTTTCTCGTGTCATGTATGAGTCTAAACTAATAAAAAGTAAGATTTATAAATTGTATATTTTAATATTTATAAGGAGTATAAGTCGGCACTTAAACACTTTCTGTGTCCACATAAAATATCGTTAAACTATATGCTTAAGCGCTTAACATTCGTAGACTCGACCCCATCAAGATTTCAATTCCACTGTTCTTCAATGTTAAAGCAACTTAGAATGCTGGACAATTCATTTGTCCAAAAATCTAATAAGAATCTTGCTCATGGGCTCACCCATGTAGGGATGGGAGAAAAAATTATAATTAAGGGAGGGATTTATTAATAGGAAAATTTGCCACTTACAATCCAAAAAAATTTACACTTTGCGAATTACAACCTTAAACTTTCAGTTTTGCGAATTACAACCTCAAACTTAATCTCGTACTTTAAATTATAACCTGAGATCATATTCCGGCAAAAACTATCGGATTAATTATGATGTCATTATTATATTTTAAACCTAATTAATAATTTCAAAAATATAAAAAAACCATAATCAGAAATTAAAAAATAAAATAATCCCCAACATACATTGTACTTTCACGGCATTCTCCCTAATTACAACCCTATAATTTTCTCTTCTTTATTCTCTATGTATTTGTTAATCTTCTACGTACAAACATCAATGACACCCCTCAAATAGCGATAGTGATGCCTTTTCTCTCCTCTGCATAATCAACAATCAGAAGCTAATTGAACAATCATAAATTACACTCAATTACTCCACAATTTAACAATGAAATCCCTAATTTACACACAATTTTTGAATAATCCCCAATTGAAGAACCCTAATTTTCGATAAAACCCCAATCCAAGAACCATAATTTTCAATTAATCCCCTACCGAAAACCCCCCAATTGAAGAACATAATTTCGAAAAACCCCCAATTGAAAAACCCTAATTTCTGAAAACCCCCAATTCGAAGAACCCTAGATTTCAACAAAACCCAATTTAAGTGTCAATTTATGTTTCGAAACCCCCAATTCAACTATGATAGGAAACAGAGAGAAAATTGAGGGAAGAGTTGAAGAGAGAAATTACATGTCATCATTGTTGAAGCTTCCAGCCTTCAACCTGTAATGGTGTCCTCTTATGTTGAAAAAATATATAGAGAGATATATCACACTGAAAGAGCATCGAGGGAGTATTTATGGAAATGTTAGCATTGAAGCTTTGAAGTTGAAAAGATGATTTTTTGGGGAGGGAGAGGAGTGCAGAAGTTAATGGTAGGAAAAAATTGTAATCGAAATGATAGTGAATGGA ATGGCTTCGGTGCAACAAGCTCAAGTGGATAGCAAATTCAATGACAAGCAGAAAGCGGCAATCGGAAAGGCTATGCAGGATGCCCAAAGTATCCTAGCCAACAACGAAAAGGACGGGCAACATCAGTTGGCTGTTGTAGGAGGTGTTATGCAGAATCTCCAGCGTAGGGTAATAGTGCTTAAGAAAACCCATGACGCTGAGGGACGATTCTTAACTAACCCTCCTGGTTCAATTGGTGGAGAAGGCCATGGTGCATTTGTGCACCAAGGTGCTACTTCTCAAGGACCACTTCCAGTGGTTGTAGGCTCCAAGTGCGCAATCATATATGGTACCATTGATAAGATGGCTCCTGCTCTTGGATATCTCTTGGCTTGGAATAGGCCCGATGATGCCAATCAAGACAGCAAGGTGTATGTGGAAGCTGGGAGTCAATACAATCTGGAGAAAATGGAGTGGAGTGAAATAGAAAAGAAACTTGATGCATCAACCAACAAAAGTCAGTTCATTGACCACGAGACAGGTGCTACAGCCACTGCTGAAATTAAGGACAATGGCAACAAACGGGCTTTGGTTGCTGCTAGTTTCGATCGCATTACAATTGGGATCCCCATCCCCAACTGA MASVQQAQVDSKFNDKQKAAIGKAMQDAQSILANNEKDGQHQLAVVGGVMQNLQRRVIVLKKTHDAEGRFLTNPPGSIGGEGHGAFVHQGATSQGPLPVVVGSKCAIIYGTIDKMAPALGYLLAWNRPDDANQDSKVYVEAGSQYNLEKMEWSEIEKKLDASTNKSQFIDHETGATATAEIKDNGNKRALVAASFDRITIGIPIPN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05180.1 vs. NCBI nr
Match: gi|902228200|gb|KNA21017.1| (hypothetical protein SOVF_046510 [Spinacia oleracea]) HSP 1 Score: 407.9 bits (1047), Expect = 1.000e-110 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1
BLAST of Spo05180.1 vs. NCBI nr
Match: gi|902230131|gb|KNA21725.1| (hypothetical protein SOVF_040700 [Spinacia oleracea]) HSP 1 Score: 269.6 bits (688), Expect = 4.400e-69 Identity = 146/209 (69.86%), Postives = 167/209 (79.90%), Query Frame = 1
BLAST of Spo05180.1 vs. NCBI nr
Match: gi|902115401|gb|KNA03877.1| (hypothetical protein SOVF_204970 [Spinacia oleracea]) HSP 1 Score: 265.8 bits (678), Expect = 6.400e-68 Identity = 138/202 (68.32%), Postives = 164/202 (81.19%), Query Frame = 1
BLAST of Spo05180.1 vs. NCBI nr
Match: gi|731366306|ref|XP_010694997.1| (PREDICTED: uncharacterized protein LOC104907726 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 210.3 bits (534), Expect = 3.200e-51 Identity = 116/206 (56.31%), Postives = 146/206 (70.87%), Query Frame = 1
BLAST of Spo05180.1 vs. NCBI nr
Match: gi|731366308|ref|XP_010694998.1| (PREDICTED: uncharacterized protein LOC104907727 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 203.4 bits (516), Expect = 3.900e-49 Identity = 113/210 (53.81%), Postives = 147/210 (70.00%), Query Frame = 1
BLAST of Spo05180.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQ85_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_046510 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 7.300e-111 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1
BLAST of Spo05180.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQC2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040700 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 3.100e-69 Identity = 146/209 (69.86%), Postives = 167/209 (79.90%), Query Frame = 1
BLAST of Spo05180.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9B3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_204970 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 4.500e-68 Identity = 138/202 (68.32%), Postives = 164/202 (81.19%), Query Frame = 1
BLAST of Spo05180.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B9H8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096830 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.200e-51 Identity = 116/206 (56.31%), Postives = 146/206 (70.87%), Query Frame = 1
BLAST of Spo05180.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E4B8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096840 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.700e-49 Identity = 113/210 (53.81%), Postives = 147/210 (70.00%), Query Frame = 1
BLAST of Spo05180.1 vs. ExPASy Swiss-Prot
Match: JIPH_ATRCA (Jasmonate-induced protein homolog OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.800e-7 Identity = 47/182 (25.82%), Postives = 83/182 (45.60%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05180.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05180.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05180.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo05180.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
RNA-Seq Expression
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