Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAACGCGATCTTTCTCTGTCACCGTTACAATGCCCTAGAATCATCTTCTCCGCTCGAATTGAAGCTGACCATAGACGTATGCAAAGATCAAATTGAAGCTCGAATCAAGCCATCCCCTCTCTTCTCTAAATGAATCAAAGTTCTCCTTTTTTTTAGGAACGATTTCAACCAAATTTTCGACTAATACAAGGTAAATTTTTGCTTCTTGTTCTTCACCTCTTCAATTTGAGCAATTCAGATATTCTGTTAAAATTTTCGCAACAATCATTTGACTAATTGATTTGATTTTCGAAATTTTAATTTGATTTATGTATTATCGAAATTTTAATTTGATTTATGTATTATCGAAATTTTAATTTATAAATGTCCCGCCCAAATCAATTTCATTGAACTTAATGTTGTTAATTAACTCGATCTGATGCGATTCATTCCTGATCAATTTGTGAGTAAGTGAGTTAGTGTGTGACTGAGAGTTAGTGAGTGAGTTAGTCTGCAATTTCAGTCAAGTCTTTTAGTTCTTTTACAAATTCTCAGACCTACCTCTTAGCATCTGTATCCCCTTATTTGCTTTACTCGGCTAAAAGTAAGATGTAACTTTTAGGTTTAACTGTTTAAGGAGTTTTCCTTCATACTTCCATTTAATTTTCTTTCCCGTGAGAGGAAGTTTTTGTAAAGATCTTCAAACTGTGTTCTTTGGATATCATTTTTATCATTCTAACCATACTTATATTTCAGTCTCAGCACACTTCGTAGCTTATTATGATTACTATGTATCCCACAATTATCGTCTTTTAGGGTTGGCATGAATCTCTTAATCGTGTTTAGATTATAAATTGAACAGCTATGTTAATTCATTATTTTGGTCCAAAATAAAATGTCAAGTGTCCATACCCACGTTCGCGTGCCGAGGATCCGAGGTACTTGGGGTAAAATGAAGATTCCAAATTTCGAAGTAACATAGTTGAACAGTGTATTATACGATAACAATTAGTCTTACAGGTTGGTTAATTTGGATAAGTAGGATAGTCAGTATGGGATCGGAAAAAGAAAGTCTTATGAGTCTTACCCCCCAGGAAGACTAATTGCTAATGTTGACAAAGATTATGGATGACTATGTGTGACAGTCTTTCTAATTTATGGTGAAGTCCTTGTAATTGTTACTTGATTTCTTCTCTTTTCTTACTTGTGCTTTCTTTTTTTTCAGAAAATGAAGCAAGAAGAAGTGGATTGTTGCCAGATTCAAGAATGGTATCCAAATTTCAAATCTGACTCTATAAAGACCGTTATCCATCAACTCCCAGAATCCTTTATTCAGTATCTGGTTGGAGATTCTGGCCCCTTTCTGCTTCCCACGTCTGTGTCAAATGAGGACGCCTTTCCCAATAGGATTCACAAACCCGAAGATGAGGAGGACTACCAACTGTCGGAAGGATCTGACGATGAGGCAGAGCAACCATCACAACCCCCTTCGTTCCCGGAACTTGAATTGAAGATCAAAGACTCAATTGAATCCCTTGATGGTGCTGTCTTTCCCAAGTTAAATTGGAGTTCACCAAAAGATACTGCATGGGTCAGCACCACTGGAACCCTCAAATGCACATCATTTAGTGACATAGCTCTCTTACTCAAATCGTCTGATTCCTTGGTCCATGATTTGTGTCATGCATACGATTCATGCAGTGACAAGACTTTGTCAAGACCACCTCATTTCTACCTTGCCCTACGGAAGTGGTACCCTTCTTTGAGACCAGAGATGGAGTTCCGTTGCTTTGTTCGTGCTCAGCAACTTGTCGGGATTTCTCAACGTGAAGTTACTGCTTATTATCCCGCTGCACTGGAAAGAAAAGAAGAGCTCAAAGATCTGATCCATGATTTTTTCATTGATAAGGTTGAAGGGAAATTTAAATCCGAAAATTACACTTTTGATGTTTATATTACGAAACATAGGAAGGTAAAGTTAATTGATTTTAATCCTTGGGGTGCATTCACATTGCCACTATTGTTTACTTGGGAGGAGTTGGAGCAAGATGGAAGGTTGGAGGAAGATGTTGATTTCAGATTAGTGGAAAGCGAGCAAACAGTACGCCCAGGTTTGAAGACTGCGGTTCCTTATGATTATATTGATATGAGCACTGGGAGTGGTTGGGACCAGTTTTTGAGGAATGCAGACGAGGAGTTGCAGCAACAGATGAGGTTTCCGGAAGCAGGTGCGTAAGCGTTTGGTATGCTGGAGGTTACTGGTTTTGGCCAAGTGCTTGTAGTTTTCTTGATACTTCAGTGTATGTTTGCTAACTATTCTTTTAATTAATTTTAATTACTCCTTGAGTTAAAGTATAAGTACTATACGAAGAAAATAGGTAGTAGGGTTGAGGTTGTACGAGTTCCTTTGGTCTCCTTACCAGTGAATGTTTTTTCGCTTGTAAGCTTTCTTCCAATACTTGCTCCTTCCTTTAAATTTGAATACGGAAGAGTTGATGATTATAGATTGTAAAATTTTTCCCTCTAATATAGGTCAAGACAACTACACTTGGGCATTAGCATGCTTTGGTATGTTGACAAGGGTGTAGGGAAGCTGTTTACCCAGACAATCATGCGTTGTCCAAAGTGTTTCTGCTGAACTTACTTTTCCGATTGAAAATCTAGAATAGCAAGCTCTAAAATGCAACATGGTTCAGTACTGATGATCGGTTTAACAAACTTGAACCGAAGTTGCGTATGGGTTATGGAAAAGGATGCCGGAAGCAGCCATGGTGCTAAGTCGCCAACGCTTTCTTGGAGACTCCTTCAGCTGTCTACGGGTTGTCAGAATCAGAGTAGCACCAAGATCCTCTATATTGGTTGTATTGGTACATTGGCTTGTTCATGTGAAGGAACAATATAA AAAAACGCGATCTTTCTCTGTCACCGTTACAATGCCCTAGAATCATCTTCTCCGCTCGAATTGAAGCTGACCATAGACGTATGCAAAGATCAAATTGAAGCTCGAATCAAGCCATCCCCTCTCTTCTCTAAATGAATCAAAGTTCTCCTTTTTTTTAGGAACGATTTCAACCAAATTTTCGACTAATACAAGAAAATGAAGCAAGAAGAAGTGGATTGTTGCCAGATTCAAGAATGGTATCCAAATTTCAAATCTGACTCTATAAAGACCGTTATCCATCAACTCCCAGAATCCTTTATTCAGTATCTGGTTGGAGATTCTGGCCCCTTTCTGCTTCCCACGTCTGTGTCAAATGAGGACGCCTTTCCCAATAGGATTCACAAACCCGAAGATGAGGAGGACTACCAACTGTCGGAAGGATCTGACGATGAGGCAGAGCAACCATCACAACCCCCTTCGTTCCCGGAACTTGAATTGAAGATCAAAGACTCAATTGAATCCCTTGATGGTGCTGTCTTTCCCAAGTTAAATTGGAGTTCACCAAAAGATACTGCATGGGTCAGCACCACTGGAACCCTCAAATGCACATCATTTAGTGACATAGCTCTCTTACTCAAATCGTCTGATTCCTTGGTCCATGATTTGTGTCATGCATACGATTCATGCAGTGACAAGACTTTGTCAAGACCACCTCATTTCTACCTTGCCCTACGGAAGTGGTACCCTTCTTTGAGACCAGAGATGGAGTTCCGTTGCTTTGTTCGTGCTCAGCAACTTGTCGGGATTTCTCAACGTGAAGTTACTGCTTATTATCCCGCTGCACTGGAAAGAAAAGAAGAGCTCAAAGATCTGATCCATGATTTTTTCATTGATAAGGTTGAAGGGAAATTTAAATCCGAAAATTACACTTTTGATGTTTATATTACGAAACATAGGAAGGTAAAGTTAATTGATTTTAATCCTTGGGGTGCATTCACATTGCCACTATTGTTTACTTGGGAGGAGTTGGAGCAAGATGGAAGGTTGGAGGAAGATGTTGATTTCAGATTAGTGGAAAGCGAGCAAACAGTACGCCCAGGTTTGAAGACTGCGGTTCCTTATGATTATATTGATATGAGCACTGGGAGTGGTTGGGACCAGTTTTTGAGGAATGCAGACGAGGAGTTGCAGCAACAGATGAGGTTTCCGGAAGCAGCAAGCTCTAAAATGCAACATGGTTCAGTACTGATGATCGGTTTAACAAACTTGAACCGAAGTTGCGTATGGGTTATGGAAAAGGATGCCGGAAGCAGCCATGGTGCTAAGTCGCCAACGCTTTCTTGGAGACTCCTTCAGCTGTCTACGGGTTGTCAGAATCAGAGTAGCACCAAGATCCTCTATATTGGTTGTATTGGTACATTGGCTTGTTCATGTGAAGGAACAATATAA ATGAAGCAAGAAGAAGTGGATTGTTGCCAGATTCAAGAATGGTATCCAAATTTCAAATCTGACTCTATAAAGACCGTTATCCATCAACTCCCAGAATCCTTTATTCAGTATCTGGTTGGAGATTCTGGCCCCTTTCTGCTTCCCACGTCTGTGTCAAATGAGGACGCCTTTCCCAATAGGATTCACAAACCCGAAGATGAGGAGGACTACCAACTGTCGGAAGGATCTGACGATGAGGCAGAGCAACCATCACAACCCCCTTCGTTCCCGGAACTTGAATTGAAGATCAAAGACTCAATTGAATCCCTTGATGGTGCTGTCTTTCCCAAGTTAAATTGGAGTTCACCAAAAGATACTGCATGGGTCAGCACCACTGGAACCCTCAAATGCACATCATTTAGTGACATAGCTCTCTTACTCAAATCGTCTGATTCCTTGGTCCATGATTTGTGTCATGCATACGATTCATGCAGTGACAAGACTTTGTCAAGACCACCTCATTTCTACCTTGCCCTACGGAAGTGGTACCCTTCTTTGAGACCAGAGATGGAGTTCCGTTGCTTTGTTCGTGCTCAGCAACTTGTCGGGATTTCTCAACGTGAAGTTACTGCTTATTATCCCGCTGCACTGGAAAGAAAAGAAGAGCTCAAAGATCTGATCCATGATTTTTTCATTGATAAGGTTGAAGGGAAATTTAAATCCGAAAATTACACTTTTGATGTTTATATTACGAAACATAGGAAGGTAAAGTTAATTGATTTTAATCCTTGGGGTGCATTCACATTGCCACTATTGTTTACTTGGGAGGAGTTGGAGCAAGATGGAAGGTTGGAGGAAGATGTTGATTTCAGATTAGTGGAAAGCGAGCAAACAGTACGCCCAGGTTTGAAGACTGCGGTTCCTTATGATTATATTGATATGAGCACTGGGAGTGGTTGGGACCAGTTTTTGAGGAATGCAGACGAGGAGTTGCAGCAACAGATGAGGTTTCCGGAAGCAGCAAGCTCTAAAATGCAACATGGTTCAGTACTGATGATCGGTTTAACAAACTTGAACCGAAGTTGCGTATGGGTTATGGAAAAGGATGCCGGAAGCAGCCATGGTGCTAAGTCGCCAACGCTTTCTTGGAGACTCCTTCAGCTGTCTACGGGTTGTCAGAATCAGAGTAGCACCAAGATCCTCTATATTGGTTGTATTGGTACATTGGCTTGTTCATGTGAAGGAACAATATAA MKQEEVDCCQIQEWYPNFKSDSIKTVIHQLPESFIQYLVGDSGPFLLPTSVSNEDAFPNRIHKPEDEEDYQLSEGSDDEAEQPSQPPSFPELELKIKDSIESLDGAVFPKLNWSSPKDTAWVSTTGTLKCTSFSDIALLLKSSDSLVHDLCHAYDSCSDKTLSRPPHFYLALRKWYPSLRPEMEFRCFVRAQQLVGISQREVTAYYPAALERKEELKDLIHDFFIDKVEGKFKSENYTFDVYITKHRKVKLIDFNPWGAFTLPLLFTWEELEQDGRLEEDVDFRLVESEQTVRPGLKTAVPYDYIDMSTGSGWDQFLRNADEELQQQMRFPEAASSKMQHGSVLMIGLTNLNRSCVWVMEKDAGSSHGAKSPTLSWRLLQLSTGCQNQSSTKILYIGCIGTLACSCEGTI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05250.1 vs. NCBI nr
Match: gi|902238339|gb|KNA25137.1| (hypothetical protein SOVF_009530 [Spinacia oleracea]) HSP 1 Score: 684.5 bits (1765), Expect = 1.100e-193 Identity = 333/335 (99.40%), Postives = 334/335 (99.70%), Query Frame = 1
BLAST of Spo05250.1 vs. NCBI nr
Match: gi|731373085|ref|XP_010666544.1| (PREDICTED: cell division cycle protein 123 homolog isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 602.8 bits (1553), Expect = 4.400e-169 Identity = 288/335 (85.97%), Postives = 309/335 (92.24%), Query Frame = 1
BLAST of Spo05250.1 vs. NCBI nr
Match: gi|870842656|gb|KMS96016.1| (hypothetical protein BVRB_002750 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 602.1 bits (1551), Expect = 7.500e-169 Identity = 287/335 (85.67%), Postives = 309/335 (92.24%), Query Frame = 1
BLAST of Spo05250.1 vs. NCBI nr
Match: gi|731373095|ref|XP_010666549.1| (PREDICTED: cell division cycle protein 123 homolog isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 601.7 bits (1550), Expect = 9.800e-169 Identity = 287/333 (86.19%), Postives = 308/333 (92.49%), Query Frame = 1
BLAST of Spo05250.1 vs. NCBI nr
Match: gi|147779745|emb|CAN76115.1| (hypothetical protein VITISV_026936 [Vitis vinifera]) HSP 1 Score: 529.6 bits (1363), Expect = 4.700e-147 Identity = 254/334 (76.05%), Postives = 291/334 (87.13%), Query Frame = 1
BLAST of Spo05250.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1Z4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_009530 PE=4 SV=1) HSP 1 Score: 684.5 bits (1765), Expect = 8.000e-194 Identity = 333/335 (99.40%), Postives = 334/335 (99.70%), Query Frame = 1
BLAST of Spo05250.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B4Z0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_002750 PE=4 SV=1) HSP 1 Score: 602.1 bits (1551), Expect = 5.200e-169 Identity = 287/335 (85.67%), Postives = 309/335 (92.24%), Query Frame = 1
BLAST of Spo05250.1 vs. UniProtKB/TrEMBL
Match: A5AW14_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026936 PE=4 SV=1) HSP 1 Score: 529.6 bits (1363), Expect = 3.300e-147 Identity = 254/334 (76.05%), Postives = 291/334 (87.13%), Query Frame = 1
BLAST of Spo05250.1 vs. UniProtKB/TrEMBL
Match: A0A061E3U2_THECC (Temperature sensing protein-related OS=Theobroma cacao GN=TCM_006078 PE=4 SV=1) HSP 1 Score: 523.9 bits (1348), Expect = 1.800e-145 Identity = 247/335 (73.73%), Postives = 293/335 (87.46%), Query Frame = 1
BLAST of Spo05250.1 vs. UniProtKB/TrEMBL
Match: F6HIW0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0047g00320 PE=4 SV=1) HSP 1 Score: 523.9 bits (1348), Expect = 1.800e-145 Identity = 251/330 (76.06%), Postives = 288/330 (87.27%), Query Frame = 1
BLAST of Spo05250.1 vs. ExPASy Swiss-Prot
Match: CD123_RAT (Cell division cycle protein 123 homolog OS=Rattus norvegicus GN=Cdc123 PE=1 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 6.100e-62 Identity = 134/323 (41.49%), Postives = 186/323 (57.59%), Query Frame = 1
BLAST of Spo05250.1 vs. ExPASy Swiss-Prot
Match: CD123_XENLA (Cell division cycle protein 123 homolog OS=Xenopus laevis GN=cdc123 PE=2 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.000e-60 Identity = 135/321 (42.06%), Postives = 190/321 (59.19%), Query Frame = 1
BLAST of Spo05250.1 vs. ExPASy Swiss-Prot
Match: CD123_MOUSE (Cell division cycle protein 123 homolog OS=Mus musculus GN=Cdc123 PE=1 SV=2) HSP 1 Score: 232.6 bits (592), Expect = 7.500e-60 Identity = 131/323 (40.56%), Postives = 184/323 (56.97%), Query Frame = 1
BLAST of Spo05250.1 vs. ExPASy Swiss-Prot
Match: CD123_HUMAN (Cell division cycle protein 123 homolog OS=Homo sapiens GN=CDC123 PE=1 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.800e-59 Identity = 132/323 (40.87%), Postives = 184/323 (56.97%), Query Frame = 1
BLAST of Spo05250.1 vs. ExPASy Swiss-Prot
Match: CD123_XENTR (Cell division cycle protein 123 homolog OS=Xenopus tropicalis GN=cdc123 PE=2 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 3.700e-59 Identity = 131/319 (41.07%), Postives = 182/319 (57.05%), Query Frame = 1
BLAST of Spo05250.1 vs. TAIR (Arabidopsis)
Match: AT4G05440.1 (temperature sensing protein-related) HSP 1 Score: 429.1 bits (1102), Expect = 3.100e-120 Identity = 204/326 (62.58%), Postives = 257/326 (78.83%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05250.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05250.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05250.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo05250.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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