Spo05254 (gene) | SpinachBase

Overview


Name	Spo05254
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	BnaC09g48000D protein
Location	chr5 : 12344554 .. 12355548 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAAAAAAAAAAAAATCTTCTTCAACCTAATTTCAGTTTTCTGGCGGAAACACTTTCATATAATCAGCAAGTTTGCTTGGGAAACGTGAATATTAGATTGAAATCTCGTTTCCCATTCGTTTCTGGGATGAATTCAGTTTCAAACACGTCTCCATTTTTCTGAAACGGTTTCGGCGCGTTCCGAAACGCGTTTCCCGGTTTCCCCGTTCCGGCGTTCCAGGACTTTTCGGAAACGGTAAGTCGTGATTTTTTTGGCGTTTCCGTGCTTCGTAGCTGTGAACTTTGTGAACTCTTCGATCTTTGAAGGTAACCTTTTTTTTTTTCTCTTCTAATTTTGTGACCCACAACTATGGAATGACTTGTTAGATAATCAATGGGTATTTTTTTCAATGAATTTATGGAATGACTTGTTAGAAAGTTATGGAAAATTATGGACATTTTATGAAATTTTCAAGGAATGCTGTATTTAATTTGATGTAGGTGTAAGATTTTATGAAATTTAATTTTATGCCAAAATTTCAAGGAATGCCATATTTAATTTGATGTATGTAAATGTTATGAAATTTTCAAGAAAGTTCAAGGAATGCCATATGTGAAACAACGAATAATTTAGAGAATGAATTTGAGTAGTAGTAATTGTATTGAATAAATTTGTGTATGTTGTGTTTATTGTAAATGCATTTTATTATTTATATTTGTTTAAGCAAAATATGACCTATAACGATTAGATGTGAGTAACTACATTTGAATGTGTCTTAGCAAGTTCAAACTAAGCTTATAAAACATGTTTTAAGTTTAAAATCAGCCCTTAGTTCTTTTATTGAAAAATGGGAGCGAAAATGCCTTATTTGGTCGATATATGACCTATATCGACCAAATATGACTTAAATGTGCTTAAATTGATTAGAATCAGTTTTAGAAACCTTGAATATGCCACATGAAACATGTAAATAGTTTGAAATGACAAGTTTGGTTCCTTAGTTCAAAGTTGGGCGAGAAAATGACATTTTAGGCAAAATATGACCTATAACGACCAAATAAGCCTTAGATGTGAGTAACTACATTTGAATGTGTCTTAGCAAGTTCAAACTAAGCTTATGAAACATGTTTTAAGTTTAAAATCAGCCCTTAGTTCTTTTAGTTGAAAAATGGGAGCGAAAATGCCTTATTTGGTCGATATATGACCTATATCGACCAAGTATGACTTAAATGTGCTTAAATTGATTAGAATCAGTTTTAGAAACCCTGAATATGCCACATAAAACATGTAAATAGTTTGAAATGACAAGTTTGGTTCCTTAGCTCAAAGTTGGGCGAGAAAATGACAATTTAGGCAAAATATGACCTATAACGACCAAATAAGCTCTAGATGTGAGTAAATACATTTGAATGTGTCTTAGCAAGTTCAAACTAAGCTTATGAAACATGTTTTAAGTTTAAAATCAACCCTTAGTTCTTTTAGTTGAAAAATGGGAGCGAAAATGCCTTATTTGGTCGATATATGACCTATATCGACCAAATATGACTTAAATGTGCTTAAATTGATTAGAATCAGTTTTAGAAACCTTGAATATGCCACATAAAACATGTAAATGATTTGAAATGACAAGTTTGGTTCCTTAGCTCAAAGTTGGGCGAGAAAATGACATTTTAGGCAAAATATGACCTATAACGACCAAATAAGCCTTAGATGTGAGTAACTACATTTGAATGTGTCTTAGCAAGTTCAAACTAAGCTTATAAAACATGTTTTAAGTTTAAAATCAGCCCTTAGCTCTTTTAGTTGAAAAATGGGAGCGAAAATGCCTTATTTGGTCGATATATGACCTATATCGACCAAATATGACTTAAATGTGCTTAAATTGATTAGAATCAGTTTTAGAAACCTTGAATATGCCACATAAAACATGTAAATAGTTTGAAATAACAAGTTTGGTTCCTTAGTTCAAAGTTGGGCGAGAAAATGATATTTTAGGCAAAATATGACCTATAACGACCAAATAAGCCTTAGATGTGAGTAACTACATTTGAATGTGTCTTAGCAAGTTCAAACTAAGCTTATCAAACATGTTTTAAGTTTAAAATCAGTCCTTAGTTCTTTTAGTTGAAAAATGGGAGCGAAAATGCCTTATTTGGTCGATATATGACCTATATCGACCAAATATGACTTAAATGTGCTTAAATTGATTAGAATCAGTTTTAGAAACCTTGAATATGACACATAAAACATGTAAATGGTTTGAAATGACAAGTTTGGTTCCTTAGCTCAAAGTTGGGCGAGGAAATGACATTTTATGCAAAATATGACCTATAACGACCAAATAAGCCTTAGATGTGAGTAACTACATTTGAATGTGTCTTAGCAAGTTCAAACTAAGCTTATAAAACATGTTTTAAGTTTAAAATCAGCCCTTCGTTCTTTTAGTTAAAAAATGGGAGCGAAAATGCCTTATTTGGTCGATATATGACCTATATCGACCAAATATGATTTAAATGTGCTTAAATTGATTAGAATCAGTTTTAGAAACCTTGAATATGCCACATAAAACATGTACATAGTTTGAAATGACAAGTTTGGTTCCTTAGTTCAAAGTTGGGCGAGAAAATGACATTTTAGGCAAAATATGACTTATAACGACCAAAACATGTAAATTAGTGACTGCCTTTGCGGTCGCTATTTCTGTCGGTAAATTTTAGCGACCGCCTTCCAGTCGGAGTTTCCTAAATTACCGTCCAGGTGAACACTGACCGCCTTTTTGCGACCGTTGGCGGTCGCAAAATCTTTTACCAACCGTTTTTCGCGTTTTACCAACTACTTTTGGCGGTCGGAAATTAATCAATTTCTTGTAGTGACATTTTCCTCTCCATCTTCCCGATTAACACTCAATATTAATACACTATTTAATTTATGTATTCTTTCAACTTTCAAAATTGCCTCTATTTAAATCATATATTCTCTCTAAAATCAAAAGCTCAATAAAATTAGAACTTAAAAAGATAGACTAAATAACCACTATACAACCGCCCGTTCTTTCAACGGGCTCAAAAGCTAGTTCTTCAAAAAATTGATCCCAAACAAAAACAATCAGGTTTATTCTTCCACAGTCAGGGGCGGAGCTTCAGGCCACAAAAATGCAGTTTCAGGAAGGCTTTTCATTTTCACGCAATTACGCAAACCCTCTTCTACAGTTCTGTCCGCCGCCGCCCAACTCCCAACTGCCGACTGCCGGAAGTGTTTTGTGAAGGAGTCAATCAGTCCACCGCAAAGAAACGAGCAGCGGAGCAGGTCGTGGCCCTCGTCGAGTCGTCGCCGATTGAAGGAACGTCCCTGCGCGGCTGCGCTAGTTGCTCGCCGTTGTGGAGGGTCGTCGGTCTCGACGTCTCGTCGTTAACTCCATTGCAGATTTGTAGGTACTTAATTCCTTTTTAAATTAAACTTGAACAAATTCAGAAAATAGTTAGGGTTCCTCGCTTTTAATTCCTTGTAAAATTGAATTTAAATTGGTATTCGTGTTTCTACTTGTTTCCTTCCTGTAAATTGTAATCCTGTTGGTTGCTACTTGCTAATTTGCTACTTTAGAAAATGAAAGAGGCGAAGGAGACGAAAAGCAACTAGGCATTTTCGATGCCGCTATTGCGACAGCCCTTCGGGCTATATTTTCGGCTACTCCGCTTATATTCCATACCTAAGGCAAAAAGAAAGGGAGAGATAGGATCTCCTTGCCTTAGACCTTTCTTAGCGGGGAGATCTTCCGTTCTGCGTGCGTGGGAACAGCTCAAACAAAGAAAAGTCTGGTCTAAATTCAGGCACGGCCCGCCCGTCTGCTGCTAGGTCGGGGAATGGCGCCAGTCGAGGGCGCCGCTATGCCCCTTAATCAATCGAATGGTCCTTCGACCCTCGTTTTCTTTTTGCGGCCGGCATAGTATTACGTTTTCAGTGGCATTAGATAATTTAGATTGATATTATTTGTGAATTTGTGCGAACTCTCCCATTAAGGTTGATCATTAATTTGAACCCATTTGGATTATGCAATGCTATTTTGCTTTATTATTATTATTACTGATATGAATGATATTTGTGTCTTAATCTTTTCTTTTTGTGTTGTCAAATCCCTTTGATTGTAAAACACTACAACCTTTATTCTAAAGTGAAAATTTGGATTTAGTTTAGATTCCAACAGTGGATAAAATGCAGAACTCTCAAACTGGTTTGTTTCCCCCCTCTGTTTGTGACTCGTAGAGAACAATTGTAATTTTGAACTATTTTTTCTTTGTAATTGATACATGTTACTTTTGTGATGATTTCTTTTTTTCAAGTATTAAAATTTTATATTTGAGCATTGATTAGTGATTGTATGGTGAGCGGCACTATCCGTGAAATCCTGGCTCCGCCAGTGTCCACAGTTCCACTAGAACTCCTTTAAACCCTACCGGAAAACTGAGCGCGACTGACTGATTTCAGATGGCAGATGTGGCGACACTTTCTCTCTCCTCCCCCACAAACTCCACCTCCGCCGCAACCTCCGCCGCCATCCCGATGCAGCTGTGTTCATTTCTCCAACCTGAAACACCAAAAACCCCAGAAATTCCTCCATCAACGATGAGGTTATGGCGGCCACAAGCTCAGAGAAATCTGCGAAATCAATGGTCCAAATTATCTTCCTCCAGACATCAATGGCACCCTTCTTCTTCTTCCGGTCGAACCCATGCCACCTCTCTAGTTAACTCTTATCTCTCCCACAGGTATTATTTATTATTCCCCCTTTTCAATTTTACTCCTTTTTTTTAAAAAAAAAAATCATGTATTTTCAATAACAACAATGTCAAAGCTCTAATTCCGGTAGGATGGAGTCGGCTGCACGAACTGAAGATTTTATCTTTGTGGTCGTCGACAAAGAACCTCTTCCTCCATTTGCTTCTATTAAGTGTCATATGCAATTCGCAAATTAAACAAGAACTTAGTGTACATGAACTAAAATGAAGTGGGCTATTATTTGAAATTGAGGGATAACATTACTCCATATTGGATAAGTTGTGCATGGAATCAAAATGGGACGTAATTTGATTATTGGATGCTGATTATAAGTTTATAACAACATAATTTGATTAAGTATCATTTTGAGAGCTGATTATAACAGTATAATTAGATTTTCTTAAAGAAATGGCTTCAGAAATTAAGTGGGCTATTATTTGAAATTGAGGGAGTGTGACATTAGTATCGGAGATGTCTCTTGGAATGTTTTTTTATTTTTTATTTTTTGTAATTGATTTTGAAATAAACGGGAAAGAGGTAGCTGTAGATTGCATTGAATTGGAGTTTCTCTTTATGGAATGATGAAAATTGTCGAAATTATTGATGGATCAACACTGTCTGTGTCAATATGGAAAGTGTGATGGATATTTTTATGTCAATATTCAATACATATGAGACAGGGCATTGAAATTTTATCTGCACAGAGATATCTGACCATGTTTAAGATAATTTGGGTTTCCATGCAGATATATGGATGCCATGGATTTGGGTGTTTTGAGTGATATGCCCAATATTCGGAAAAAGGCTTGTTCTAAATTGCTTAAGCAGATGGTTAGTGGGATGATTCACCTTCATTCTTGCTTTCATTTTGTTTTAAGTTGGTATGCTTTTGGCGGTATTGAAACTAGAGGAAATTCTTGCTGATAAGTTGAGCTTCTTTAGTGAGAATCTAGCAAGTTAGTGTGATGTATTTGATTATTGTGATGAAGATACTTTCTATAGTGAATGAAGGAAAACAATGGTGCAATAGTTCTCCAGGAACCCAAAATACAACAAAAACATCAGTTGTTTTTTGTTGGAAGTATCTCTAACTTGATGTGTTTGTCTCATACCAGGAGCTTCAGCGCGACCGACTTTTAACTTCCTACAAGGCTATGGTACGTTTTTTAGACTGAATCGTCAAATTAGCTGGAGAGTATATGTATCACTCAGATCAAAAGCAATGTATATTGGTGTGTCAGAGAAAAGAGTAATAGTAATGCCCAAATATGCTTTTTACTTTTCCATGTCTAGTGTTTCTATACTTCTAAGCCCATAAACACTGATTAAGTGCTTAGTAGGTGTAATATTGCATTGTTAAGATTCGCAGCAAGTATCAAGAGTTGATTCTTTTCTCCATTGCTAAATTTATCAGATTATTGGTGGTAGCGTGCAGGGATTATGCATCTTTAAGTGGAAATAGAGTGATGTCCATGTCTTACATTATTAATTAGGGCTGGATGACATATCTTGTAGGTCGCTGTTGTTATTGACATGACGAATTTGAGCAAATCGATGAGATGCTTCTTGAAAACTACTAGTGGTAGCGCCATTCAACAGTTTTCTAAATTTTCAGAGAACAATGATGATACTGGTGATGGTGGAGGGGCTCCAGTTTTCACATTTTTGTCCATCTCTGCACATGGTATGTTGATAATTGTTGGTTTTTCTAAAGACAGCTTCTTTAAGTAATGAATGCTAACAACTCCATGCGTGACTGCTTGTTCTAGAAATCTAGAATACCTTAGTGCTTGTTCGTTGTTGTATTGTACCCATGGAGTTTTATTTAAAATTTAATGATCATGTACAACACCTTTAACTTCTTAGTCAAATCATTGACAATATAAATGAATAGGGCAGAAGCTCCAAAGGCAGAGAGCAGGACTATCTACTTAAAGAAAACTGATTGAATTCTTTCAGTAATGATGTTAGCTAAAGTAGTTATCATTGTTGACACAATAGATCTTTTTATTAGCAACGAGAATTGAGAAAACATTACCTTACTGAGGGAGTGGGCCGAGGAGTAAATCTATGTGAGAATGTGGCATTTGAATTTAATGGGGCTTATAAAGAGGGGGAATGTTAGACGAATCACGACGAGAAAAAACGTCCTTAAAATTTTTATACTTCTTTGAAAATGTCATGGTGAACTTTTCAGGGTGAAGGGGGTAGTTTATGCACAAACAACAAAGGGCACTTTTGCTTATGATACAACTCATTACTTGGTCAGCCACAGTTCCCCCAGCGGAGGCAAACCTTTGATGGAGTTTGTTTTACTAGAATTGAACTCATTTTTTGCTTTTGTTCCTCCTACACAACTCCATGACCTCAATGGTTAGATTTTTTTCATTTTATTGTGAATGCTTTTCGATTGCACAAAATGAGGATTTTCAAAATTTGATTCCCAACTCAACAGTCAATACTGCAGAGCGTTGCACTACCGTACTCACTAGCTTTGTCCATCACACTGATACATATTATTATGCAGACACAACTAAGACAAATAGCAGATACTGTGAACCAGATGAACTTCATGGCTCCTGCCTTTCTTGATTCTGAATTTCAAAGTAGAATGATTTTCAAGCATGATTATTTGACATTGTGCTATCTCTTTTTATCTTGTCATATCCTGATACGTTTAATCACACTGACGTTTTAGAGATGTTGGCCGAGGAGCTTGTGGAAATGTTCAAACAGGAGCTTGTTTTGAAGGTAACTGGCAGTCAATATAGAATGCACATATTTGTTCACCTTTAGTTTTCAAAATTTGTTCCTTCATTATTCTTACTTTTATCAGCAGCGTTTGCTTGTAGTTGAGCTGCTTGCCAGCAGTTGTCCAGAAAAAGAACAATCCAATCAACTGTGTTGGGAAGATGAACTTTATCACGGCGAAGCTGATGACTTGAACATGTGCAACTTGTACTCAAAAGATACTGCTGAGGCATTTCATCCCAAAATAAGTGGCTGGAAATCGAAAACTTCAAATGTGGAGTCTGAGAAAAACCCAAACCACGATGTTTTGCAGGTATGGTGGAACCAATATGACGTATAAACATATGATTATGTGCCTGTGAGCTATCCATTCTGTTTTTTACACAAAGCGAATCATATATGTCCTGTCAAGTTCGAAGTCTTTTACCAGTCCTGAAAACTAACTCTATGCTTAGCTTTAAGATATTAAGCATGGTACTATTAGCTTACTAGTGTGGAGCTGAAGCATCCCCTGGCTTAGCAGTTCTCTCATGCCTCTTTCTTGTAGCTGACCTACTTAACAAATTAACATAGTGGACATATAAATTGGTACAATTCGTATCTTGGTCTCACAATAGGTCAGGTATTTAGGTTATTCCGAAAGGTGTTCAGTTGTTTTATACAGAAATGGCGCTGGCAGCCTGGCAGCTCCTCCCACTCCCCCCACCTATGTTGCACGGAAACGGGTACGAGAACGGGTACGGGGACGGGTACGAGGACGGAAAACGGCAAAATCAAAATTGCTAAAAACGGGTACGGCAAGGATTCGGCAAAAAAAAAACAAGAATTTTTAATTTTGTAAATGTGGGTTAAAATTTTATTTTTTGTGGGAATTTAAATTTTAGAATCAGTCAAAATTAAAATAGCTAACATCATTAACCCATCAATAGCCAACATCTATACCTAAACAAATAAATAAAGGAATCTCCTCCAAAAAGACAAAATAGTAGGCGGGCCACTAGGCCACTACAATAATAAATAAGTAAAAGAAAAATTTAAAAAAACTAAAGTCAAGAAAAGGATTAAAAGGAACACCTTTAATCTCCGTCCTTCTTTCTCCTTTTCGTCTTCTTCCTCTACTTCAGCCATTATTAAACCTCTTCATCTTCTTCTCACCGCCATTATTTAAAAAAACATCTTCCTTACTAAGGTAGGCAGCCACTATGCAGCCTATGTTCGTCGCGTCGCTCCTCACTTGCTACGAACTACGAAGTTCAAGCACGGCCGGAGCGGCGGGCTGGGCCGGGGCGAGGAAGAAGGCCGACGGCGAGGGAGCAATCGGCGGGCCGCCAAACGACGGCTTCAAATAGACAAAGAGAGGTGAGAGAGAAAGTGGAGAATGGAGATTTGAAAAATAAACCCTAAATTTGAATTTGGGTCTTAAAAATTCAGTTGGGTACTTGATTTATTTCCAAAAACGTACCCAAATCGTACCCAGCCGTACCCACATTTAGCCCACGTACCCACATTTTGGATTCATTTTAGGGACGTTTCCTGGGCGTACCCGTCCCGTACCCGTACCGTACCCGTACACGTACCCGGTACGGGAAACGGGTATTCCCAGGCGTACCCGTGCTTCGTAGCCCCCCACCACCTCCCACCCCCCTCTCAATGTAACCAATACTCAACTGGTCCCTGTAGACCGTCCTGGTAAATTCAAGGAAAAAGAAAGCCTTTAACATTGCATTGCAAAGACTTGGCAGACATACTATCAGTTTATCAGAATACTCATATAGTGGAGCACTTGCTCATATGGTAATGTGGCAACAATCTCTAGAGAAAAAAGAAAGGATCTATCTCTTGTGTCCATCACCCTATCCTTTTCGTTGTTGCCACATTATCCAAGAGTAAATAGCTAGATATTAGTTGCACCTTGTACTTTAACCAGTTACTATGCTATTTAGATTCTGAAACTACACGCTGTCACCTATTTCAACAGATTCTAAGCAAAAACTTCTGAACGTTAGGTGCTGGATGCTACTCATGACAATTATATGTATCTGTTAGGTGTAATTTCACATAGTTTATGTGTTGGTTTGCAATTTTCAACAATGGACNTCCCCCCCCCCCCCCCCCCCCTTTCTAACTCCATGGCTTGCTTTTAATGTTAATCTGCCTCTGACAGGTCTATCTCACAACATGGCTTGCTGAGGTGAATATAGATACATTCAGGTAAAGTATAATAAAAGTAGTAGATGAAAATAACATACGGAAGGAAATCCAAATATACTGTACTACCAGATCACTCTTTCTGTTCATAACATGTATCGCAGAGAGGTTGGGATTCTTTCTGTAGGATTGAACTGAACGACAATGAATTTTAGTGTGAGATTTTAGGATGTTGACACGTACTATTTTTGTTGGAATCATTATCACTGTCTTTTTGTTCGTTCCATAATTGACCTCCCAGTTTAAAGTGCCACGGAGATTAATCAACATGTTGAAAGTAGAATGAAAAATTTAGTAAGAAAAAGCATTGGAATGAAGTGAAAAGGGCTAACCCGTTAAAAAAATAAGTGAAAGGGGGTTGATCCATTGGAAGGAGAAAGTGATTCAACTTATAAAGGAAATGGAAGTATTTATTTTGGGATGGAGGGAATACTTCATTGTGACGGTTAGGAGTTAGGGCAAGTGCAAAGTAATTAGAGCTTGAGATGGAATAATTAGTGGTTAACTTGGCACATCTCCTTATTCAGTTCCCCCAATTTCCCCTCTCTCCTCACTCCTGGTGGAGCCATACACCCGTCTCCCCCTTCCCCCCCAAATACCTTCATCCTTATTTAGCTATCACTTTGCTCAATTACTTCTGACAAAGGGCGTAAAATATATCAATATATTGTATTATTTAATGTTAGAATGATTTAAAAGGTAGGAGGAGAAAAATCCACGTTGACTTCTTGTATGAAGATGGGGTGTGAAATTAATCTGGAATAGAGAATATCTTTATAGCTTATTTACATATCTATCTATCTATCATCTCAATATTATTTTGGCATCCTACTCTTATTGAGTTCTTCCACTTTGCCTGAAGTTTATAGAAAATTCCTAAGCGTTTTGATGTTTTTCATCAGGGTGGAAGAGATTTTTGTCACTGTTGAAGAGGAGCTACGAACGAGCTTTTCATGAGCTTCTCTAATGCTGAGTCTGACATCTACATGAAACAGAGGTTATGTTGGTATATAGTTCATACGGTCAATTTAAAGATTTTGAAGGCTTGGGCTAAATATTTGAGAATTGTGATGGCTCCTTCTAATTCTTTTCTTTTGATTCGAATTATTAGTCTCCATGTTTATGTGTCAACTGAATCATTAAGGTTTGGTTATCACCATTGATTACCGCCTATTAGTTTACTGTATGTATTTCAAAATGACGATGTAATTTTCATATTATGACTTGATATTTTAGTCTGTATAATCGTTTCTTTGAACTGGGAGATTTCGGTGCATTGA

mRNA sequence

CAAAAAAAAAAAAAAAAATCTTCTTCAACCTAATTTCAGTTTTCTGGCGGAAACACTTTCATATAATCAGCAAGTTTGCTTGGGAAACGTGAATATTAGATTGAAATCTCGTTTCCCATTCGTTTCTGGGATGAATTCAGTTTCAAACACGTCTCCATTTTTCTGAAACGGTTTCGGCGCGTTCCGAAACGCGTTTCCCGGTTTCCCCGTTCCGGCGTTCCAGGACTTTTCGGAAACGGTAAGTCGTGATTTTTTTGGCGTTTCCGTGCTTCGTAGCTGTGAACTTTGTGAACTCTTCGATCTTTGAAGATGGCAGATGTGGCGACACTTTCTCTCTCCTCCCCCACAAACTCCACCTCCGCCGCAACCTCCGCCGCCATCCCGATGCAGCTGTGTTCATTTCTCCAACCTGAAACACCAAAAACCCCAGAAATTCCTCCATCAACGATGAGGTTATGGCGGCCACAAGCTCAGAGAAATCTGCGAAATCAATGGTCCAAATTATCTTCCTCCAGACATCAATGGCACCCTTCTTCTTCTTCCGGTCGAACCCATGCCACCTCTCTAGTTAACTCTTATCTCTCCCACAGATATATGGATGCCATGGATTTGGGTGTTTTGAGTGATATGCCCAATATTCGGAAAAAGGCTTGTTCTAAATTGCTTAAGCAGATGGAGCTTCAGCGCGACCGACTTTTAACTTCCTACAAGGCTATGGTCGCTGTTGTTATTGACATGACGAATTTGAGCAAATCGATGAGATGCTTCTTGAAAACTACTAGTGGTAGCGCCATTCAACAGTTTTCTAAATTTTCAGAGAACAATGATGATACTGGTGATGGTGGAGGGGCTCCAGTTTTCACATTTTTGTCCATCTCTGCACATGAGATGTTGGCCGAGGAGCTTGTGGAAATGTTCAAACAGGAGCTTGTTTTGAAGCGTTTGCTTGTAGTTGAGCTGCTTGCCAGCAGTTGTCCAGAAAAAGAACAATCCAATCAACTGTGTTGGGAAGATGAACTTTATCACGGCGAAGCTGATGACTTGAACATGTGCAACTTGTACTCAAAAGATACTGCTGAGGCATTTCATCCCAAAATAAGTGGCTGGAAATCGAAAACTTCAAATGTGGAGTCTGAGAAAAACCCAAACCACGATGTTTTGCAGGTCTATCTCACAACATGGCTTGCTGAGGTGAATATAGATACATTCAGGGTGGAAGAGATTTTTGTCACTGTTGAAGAGGAGCTACGAACGAGCTTTTCATGAGCTTCTCTAATGCTGAGTCTGACATCTACATGAAACAGAGGTTATGTTGGTATATAGTTCATACGGTCAATTTAAAGATTTTGAAGGCTTGGGCTAAATATTTGAGAATTGTGATGGCTCCTTCTAATTCTTTTCTTTTGATTCGAATTATTAGTCTCCATGTTTATGTGTCAACTGAATCATTAAGGTTTGGTTATCACCATTGATTACCGCCTATTAGTTTACTGTATGTATTTCAAAATGACGATGTAATTTTCATATTATGACTTGATATTTTAGTCTGTATAATCGTTTCTTTGAACTGGGAGATTTCGGTGCATTGA

Coding sequence (CDS)

ATGGCAGATGTGGCGACACTTTCTCTCTCCTCCCCCACAAACTCCACCTCCGCCGCAACCTCCGCCGCCATCCCGATGCAGCTGTGTTCATTTCTCCAACCTGAAACACCAAAAACCCCAGAAATTCCTCCATCAACGATGAGGTTATGGCGGCCACAAGCTCAGAGAAATCTGCGAAATCAATGGTCCAAATTATCTTCCTCCAGACATCAATGGCACCCTTCTTCTTCTTCCGGTCGAACCCATGCCACCTCTCTAGTTAACTCTTATCTCTCCCACAGATATATGGATGCCATGGATTTGGGTGTTTTGAGTGATATGCCCAATATTCGGAAAAAGGCTTGTTCTAAATTGCTTAAGCAGATGGAGCTTCAGCGCGACCGACTTTTAACTTCCTACAAGGCTATGGTCGCTGTTGTTATTGACATGACGAATTTGAGCAAATCGATGAGATGCTTCTTGAAAACTACTAGTGGTAGCGCCATTCAACAGTTTTCTAAATTTTCAGAGAACAATGATGATACTGGTGATGGTGGAGGGGCTCCAGTTTTCACATTTTTGTCCATCTCTGCACATGAGATGTTGGCCGAGGAGCTTGTGGAAATGTTCAAACAGGAGCTTGTTTTGAAGCGTTTGCTTGTAGTTGAGCTGCTTGCCAGCAGTTGTCCAGAAAAAGAACAATCCAATCAACTGTGTTGGGAAGATGAACTTTATCACGGCGAAGCTGATGACTTGAACATGTGCAACTTGTACTCAAAAGATACTGCTGAGGCATTTCATCCCAAAATAAGTGGCTGGAAATCGAAAACTTCAAATGTGGAGTCTGAGAAAAACCCAAACCACGATGTTTTGCAGGTCTATCTCACAACATGGCTTGCTGAGGTGAATATAGATACATTCAGGGTGGAAGAGATTTTTGTCACTGTTGAAGAGGAGCTACGAACGAGCTTTTCATGA

Protein sequence

MADVATLSLSSPTNSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHEMLAEELVEMFKQELVLKRLLVVELLASSCPEKEQSNQLCWEDELYHGEADDLNMCNLYSKDTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEELRTSFS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo05254.1	Spo05254.1	mRNA

Homology

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BLAST of Spo05254.1 vs. NCBI nr
Match: gi|731365997|ref|XP_010694827.1| (PREDICTED: uncharacterized protein LOC104907579 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 418.7 bits (1075), Expect = 9.100e-114
Identity = 228/311 (73.31%), Postives = 254/311 (81.67%), Query Frame = 1


		  
Query: 9   LSSPTNSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSS 68
           L SP+ S+S   S +IPM   S  QP+ PK  E  P  +RLWRPQAQRNLRNQWSKLSS 
Sbjct: 6   LVSPSLSSS---SISIPMYAYSCFQPQAPKFSEHSPM-LRLWRPQAQRNLRNQWSKLSSL 65

Query: 69  RHQWHPSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDR 128
           RHQW+PSS+SGRTHATSLVNSYLS+RYMDAMDLGVLSDMP IRKKACSKLLKQ+E +R++
Sbjct: 66  RHQWYPSSTSGRTHATSLVNSYLSYRYMDAMDLGVLSDMPIIRKKACSKLLKQLEFERNQ 125

Query: 129 LLTSYKAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLS 188
           LL+SYKAMV  V+ M N SKSMRCFLK T GS   QFSK SEN DDTGDGGGAPVFT+ S
Sbjct: 126 LLSSYKAMVTAVVGMENSSKSMRCFLKATGGSPFIQFSKSSENGDDTGDGGGAPVFTYFS 185

Query: 189 ISAHEMLAEELVEMFKQELVLKRLLVVELLASSCPEKEQS-NQLCWEDELYHGEADDLNM 248
           ISA E  A ELV+MFKQEL+LKRLLVVELLA+ C E EQ  NQ  W DELYHGEA+DL+M
Sbjct: 186 ISAFESFAAELVQMFKQELLLKRLLVVELLANICLETEQEFNQFSWADELYHGEAEDLSM 245

Query: 249 CNLYSKDTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFV 308
           CNLYSK T E F PK+SGWKS+TS + SEKNP+H VLQVYLTTWLAEVNID+ RVEEIFV
Sbjct: 246 CNLYSKVTDEPFLPKVSGWKSETSYMRSEKNPDHSVLQVYLTTWLAEVNIDSSRVEEIFV 305

Query: 309 TVEEELRTSFS 319
           TV  ELRT+ S
Sbjct: 306 TVGGELRTTLS 312

[Close]

BLAST of Spo05254.1 vs. NCBI nr
Match: gi|731425481|ref|XP_010663265.1| (PREDICTED: uncharacterized protein LOC100251942 isoform X1 [Vitis vinifera])

HSP 1 Score: 340.5 bits (872), Expect = 3.200e-90
Identity = 183/300 (61.00%), Postives = 223/300 (74.33%), Query Frame = 1


		  
Query: 14  NSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWH 73
           +STS+ +S+A      S LQ  + KTP+ PPS +RLWRP AQRNLRNQWSKL+S R QW 
Sbjct: 5   DSTSSCSSSA------SNLQSPSSKTPQPPPSVIRLWRPAAQRNLRNQWSKLASYRQQWT 64

Query: 74  PSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSY 133
            ++S GR+HAT LVN+YLS RYM AM+LGVLSDMPNIRKKAC KLLKQ  L   +LL++Y
Sbjct: 65  STASKGRSHATDLVNAYLSLRYMPAMELGVLSDMPNIRKKACMKLLKQQGLHGSKLLSAY 124

Query: 134 KAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHE 193
           K MVAVV  M N S+SMRCFLK TS S + QFS  SE+ +D GDGGG P F F  IS+ E
Sbjct: 125 KDMVAVVTHMVNTSRSMRCFLKGTSSSPLVQFSSLSEDTNDLGDGGGTPAFLFWPISSFE 184

Query: 194 MLAEELVEMFKQELVLKRLLVVELLASSCPEKEQSNQLCWEDELYHGEADDLNMCNLYSK 253
            LAEELV+MF  EL LKRLLVVELL+ SC E  Q ++ CW DELY GE DDL +C+L+SK
Sbjct: 185 KLAEELVQMFILELNLKRLLVVELLSISCEEAPQDDRYCWSDELYPGEFDDLGICSLHSK 244

Query: 254 DTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEEL 313
           +  E   PKI G++S +  + S + P+H++LQVYLTTWLAEVNIDT RV+EIF  + EE+
Sbjct: 245 EIGELIPPKIIGFESHSPVIRSNQQPDHEILQVYLTTWLAEVNIDTHRVDEIFAVIGEEM 298

[Close]

BLAST of Spo05254.1 vs. NCBI nr
Match: gi|731425489|ref|XP_010663270.1| (PREDICTED: uncharacterized protein LOC100262180 isoform X1 [Vitis vinifera])

HSP 1 Score: 332.4 bits (851), Expect = 8.600e-88
Identity = 180/305 (59.02%), Postives = 220/305 (72.13%), Query Frame = 1


		  
Query: 14  NSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWH 73
           ++TS+ +S++      S LQ  + KTP  PPS + LWRP AQRNLRNQWSKL+S R QW 
Sbjct: 5   DATSSCSSSS------SNLQSPSSKTPTRPPSVICLWRPAAQRNLRNQWSKLASYRQQWT 64

Query: 74  PSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSY 133
            ++S GR+HAT LVNSYLS RYM AM+LGVLSDMPNIRKKAC KLLKQ  L   +LL++Y
Sbjct: 65  STASKGRSHATDLVNSYLSQRYMPAMELGVLSDMPNIRKKACMKLLKQQGLHGSKLLSAY 124

Query: 134 KAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHE 193
           K MVAVV  M N S+SMRCFLK TS S + QFS  SE+ +D GDGGG P F F  IS+ E
Sbjct: 125 KDMVAVVTHMVNTSRSMRCFLKGTSSSPLVQFSSLSEDTNDLGDGGGTPAFLFWPISSFE 184

Query: 194 MLAEELVEMFKQELVLKRLLVVELLASSCPEKEQSNQLCWEDELYHGEADDLNMCNLYSK 253
            LAEELV+MF  EL LKRLLVVEL + SC E  Q ++ CW DELY GE DD  +C+L+SK
Sbjct: 185 KLAEELVQMFILELNLKRLLVVELHSISCEEAPQKDRYCWSDELYPGEFDDWGICSLHSK 244

Query: 254 DTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEEL 313
           +  E   PKI G++S +  + S + P+H++LQVYLTTWLAEVNIDT RV+EIF  + EE+
Sbjct: 245 EIGELIPPKIIGFESHSLVIRSNQQPDHEILQVYLTTWLAEVNIDTHRVDEIFAVIGEEM 303

Query: 314 RTSFS 319
               S
Sbjct: 305 HVGLS 303

[Close]

BLAST of Spo05254.1 vs. NCBI nr
Match: gi|902165985|gb|KNA07184.1| (hypothetical protein SOVF_174230 [Spinacia oleracea])

HSP 1 Score: 330.5 bits (846), Expect = 3.300e-87
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1


		  
Query: 26  MQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATS 85
           MQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATS
Sbjct: 1   MQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATS 60

Query: 86  LVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTN 145
           LVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTN
Sbjct: 61  LVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTN 120

Query: 146 LSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAH 193
           LSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAH
Sbjct: 121 LSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAH 167

[Close]

BLAST of Spo05254.1 vs. NCBI nr
Match: gi|731366003|ref|XP_010694831.1| (PREDICTED: uncharacterized protein LOC104907579 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 322.4 bits (825), Expect = 8.900e-85
Identity = 170/226 (75.22%), Postives = 188/226 (83.19%), Query Frame = 1


		  
Query: 94  RYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTNLSKSMRCF 153
           RYMDAMDLGVLSDMP IRKKACSKLLKQ+E +R++LL+SYKAMV  V+ M N SKSMRCF
Sbjct: 7   RYMDAMDLGVLSDMPIIRKKACSKLLKQLEFERNQLLSSYKAMVTAVVGMENSSKSMRCF 66

Query: 154 LKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHEMLAEELVEMFKQELVLKRLL 213
           LK T GS   QFSK SEN DDTGDGGGAPVFT+ SISA E  A ELV+MFKQEL+LKRLL
Sbjct: 67  LKATGGSPFIQFSKSSENGDDTGDGGGAPVFTYFSISAFESFAAELVQMFKQELLLKRLL 126

Query: 214 VVELLASSCPEKEQS-NQLCWEDELYHGEADDLNMCNLYSKDTAEAFHPKISGWKSKTSN 273
           VVELLA+ C E EQ  NQ  W DELYHGEA+DL+MCNLYSK T E F PK+SGWKS+TS 
Sbjct: 127 VVELLANICLETEQEFNQFSWADELYHGEAEDLSMCNLYSKVTDEPFLPKVSGWKSETSY 186

Query: 274 VESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEELRTSFS 319
           + SEKNP+H VLQVYLTTWLAEVNID+ RVEEIFVTV  ELRT+ S
Sbjct: 187 MRSEKNPDHSVLQVYLTTWLAEVNIDSSRVEEIFVTVGGELRTTLS 232

[Close]

BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BDN8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g095820 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 6.400e-114
Identity = 228/311 (73.31%), Postives = 254/311 (81.67%), Query Frame = 1


		  
Query: 9   LSSPTNSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSS 68
           L SP+ S+S   S +IPM   S  QP+ PK  E  P  +RLWRPQAQRNLRNQWSKLSS 
Sbjct: 6   LVSPSLSSS---SISIPMYAYSCFQPQAPKFSEHSPM-LRLWRPQAQRNLRNQWSKLSSL 65

Query: 69  RHQWHPSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDR 128
           RHQW+PSS+SGRTHATSLVNSYLS+RYMDAMDLGVLSDMP IRKKACSKLLKQ+E +R++
Sbjct: 66  RHQWYPSSTSGRTHATSLVNSYLSYRYMDAMDLGVLSDMPIIRKKACSKLLKQLEFERNQ 125

Query: 129 LLTSYKAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLS 188
           LL+SYKAMV  V+ M N SKSMRCFLK T GS   QFSK SEN DDTGDGGGAPVFT+ S
Sbjct: 126 LLSSYKAMVTAVVGMENSSKSMRCFLKATGGSPFIQFSKSSENGDDTGDGGGAPVFTYFS 185

Query: 189 ISAHEMLAEELVEMFKQELVLKRLLVVELLASSCPEKEQS-NQLCWEDELYHGEADDLNM 248
           ISA E  A ELV+MFKQEL+LKRLLVVELLA+ C E EQ  NQ  W DELYHGEA+DL+M
Sbjct: 186 ISAFESFAAELVQMFKQELLLKRLLVVELLANICLETEQEFNQFSWADELYHGEAEDLSM 245

Query: 249 CNLYSKDTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFV 308
           CNLYSK T E F PK+SGWKS+TS + SEKNP+H VLQVYLTTWLAEVNID+ RVEEIFV
Sbjct: 246 CNLYSKVTDEPFLPKVSGWKSETSYMRSEKNPDHSVLQVYLTTWLAEVNIDSSRVEEIFV 305

Query: 309 TVEEELRTSFS 319
           TV  ELRT+ S
Sbjct: 306 TVGGELRTTLS 312

[Close]

BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
Match: D7SI28_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g07130 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.200e-90
Identity = 183/300 (61.00%), Postives = 223/300 (74.33%), Query Frame = 1


		  
Query: 14  NSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWH 73
           +STS+ +S+A      S LQ  + KTP+ PPS +RLWRP AQRNLRNQWSKL+S R QW 
Sbjct: 5   DSTSSCSSSA------SNLQSPSSKTPQPPPSVIRLWRPAAQRNLRNQWSKLASYRQQWT 64

Query: 74  PSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSY 133
            ++S GR+HAT LVN+YLS RYM AM+LGVLSDMPNIRKKAC KLLKQ  L   +LL++Y
Sbjct: 65  STASKGRSHATDLVNAYLSLRYMPAMELGVLSDMPNIRKKACMKLLKQQGLHGSKLLSAY 124

Query: 134 KAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHE 193
           K MVAVV  M N S+SMRCFLK TS S + QFS  SE+ +D GDGGG P F F  IS+ E
Sbjct: 125 KDMVAVVTHMVNTSRSMRCFLKGTSSSPLVQFSSLSEDTNDLGDGGGTPAFLFWPISSFE 184

Query: 194 MLAEELVEMFKQELVLKRLLVVELLASSCPEKEQSNQLCWEDELYHGEADDLNMCNLYSK 253
            LAEELV+MF  EL LKRLLVVELL+ SC E  Q ++ CW DELY GE DDL +C+L+SK
Sbjct: 185 KLAEELVQMFILELNLKRLLVVELLSISCEEAPQDDRYCWSDELYPGEFDDLGICSLHSK 244

Query: 254 DTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEEL 313
           +  E   PKI G++S +  + S + P+H++LQVYLTTWLAEVNIDT RV+EIF  + EE+
Sbjct: 245 EIGELIPPKIIGFESHSPVIRSNQQPDHEILQVYLTTWLAEVNIDTHRVDEIFAVIGEEM 298

[Close]

BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
Match: D7SI27_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g07140 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 6.000e-88
Identity = 180/305 (59.02%), Postives = 220/305 (72.13%), Query Frame = 1


		  
Query: 14  NSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWH 73
           ++TS+ +S++      S LQ  + KTP  PPS + LWRP AQRNLRNQWSKL+S R QW 
Sbjct: 5   DATSSCSSSS------SNLQSPSSKTPTRPPSVICLWRPAAQRNLRNQWSKLASYRQQWT 64

Query: 74  PSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSY 133
            ++S GR+HAT LVNSYLS RYM AM+LGVLSDMPNIRKKAC KLLKQ  L   +LL++Y
Sbjct: 65  STASKGRSHATDLVNSYLSQRYMPAMELGVLSDMPNIRKKACMKLLKQQGLHGSKLLSAY 124

Query: 134 KAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHE 193
           K MVAVV  M N S+SMRCFLK TS S + QFS  SE+ +D GDGGG P F F  IS+ E
Sbjct: 125 KDMVAVVTHMVNTSRSMRCFLKGTSSSPLVQFSSLSEDTNDLGDGGGTPAFLFWPISSFE 184

Query: 194 MLAEELVEMFKQELVLKRLLVVELLASSCPEKEQSNQLCWEDELYHGEADDLNMCNLYSK 253
            LAEELV+MF  EL LKRLLVVEL + SC E  Q ++ CW DELY GE DD  +C+L+SK
Sbjct: 185 KLAEELVQMFILELNLKRLLVVELHSISCEEAPQKDRYCWSDELYPGEFDDWGICSLHSK 244

Query: 254 DTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEEL 313
           +  E   PKI G++S +  + S + P+H++LQVYLTTWLAEVNIDT RV+EIF  + EE+
Sbjct: 245 EIGELIPPKIIGFESHSLVIRSNQQPDHEILQVYLTTWLAEVNIDTHRVDEIFAVIGEEM 303

Query: 314 RTSFS 319
               S
Sbjct: 305 HVGLS 303

[Close]

BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIV7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_174230 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.300e-87
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1


		  
Query: 26  MQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATS 85
           MQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATS
Sbjct: 1   MQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATS 60

Query: 86  LVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTN 145
           LVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTN
Sbjct: 61  LVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTN 120

Query: 146 LSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAH 193
           LSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAH
Sbjct: 121 LSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAH 167

[Close]

BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B9U7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g095820 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 6.200e-85
Identity = 170/226 (75.22%), Postives = 188/226 (83.19%), Query Frame = 1


		  
Query: 94  RYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTNLSKSMRCF 153
           RYMDAMDLGVLSDMP IRKKACSKLLKQ+E +R++LL+SYKAMV  V+ M N SKSMRCF
Sbjct: 94  RYMDAMDLGVLSDMPIIRKKACSKLLKQLEFERNQLLSSYKAMVTAVVGMENSSKSMRCF 153

Query: 154 LKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHEMLAEELVEMFKQELVLKRLL 213
           LK T GS   QFSK SEN DDTGDGGGAPVFT+ SISA E  A ELV+MFKQEL+LKRLL
Sbjct: 154 LKATGGSPFIQFSKSSENGDDTGDGGGAPVFTYFSISAFESFAAELVQMFKQELLLKRLL 213

Query: 214 VVELLASSCPEKEQS-NQLCWEDELYHGEADDLNMCNLYSKDTAEAFHPKISGWKSKTSN 273
           VVELLA+ C E EQ  NQ  W DELYHGEA+DL+MCNLYSK T E F PK+SGWKS+TS 
Sbjct: 214 VVELLANICLETEQEFNQFSWADELYHGEAEDLSMCNLYSKVTDEPFLPKVSGWKSETSY 273

Query: 274 VESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEELRTSFS 319
           + SEKNP+H VLQVYLTTWLAEVNID+ RVEEIFVTV  ELRT+ S
Sbjct: 274 MRSEKNPDHSVLQVYLTTWLAEVNIDSSRVEEIFVTVGGELRTTLS 319

[Close]

BLAST of Spo05254.1 vs. TAIR (Arabidopsis)
Match: AT5G07950.1 (unknown protein)

HSP 1 Score: 281.6 bits (719), Expect = 6.100e-76
Identity = 150/273 (54.95%), Postives = 196/273 (71.79%), Query Frame = 1


		  
Query: 45  STMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATSLVNSYLSHRYMDAMDLGVL 104
           S+MRLWRP AQRNLRNQWS LS+ R QW  + S+GR+HAT LVNSYLS +YM  M+LGVL
Sbjct: 33  SSMRLWRPAAQRNLRNQWSNLSNCRQQWIVACSAGRSHATLLVNSYLSQKYMPMMELGVL 92

Query: 105 SDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQ 164
           SDM +I KKA  KL  Q    R +LL+SYK MVAVV++M N S+S+RC+ K ++GS I Q
Sbjct: 93  SDMFDIDKKALKKLFTQQSSYRIKLLSSYKEMVAVVVEMVNASRSLRCYTKLSTGSLI-Q 152

Query: 165 FSKFSENNDDTGDGGGAPVFTFLSISAHEMLAEELVEMFKQELVLKRLLVVELLASSCPE 224
           FS   E+++D GD GG PVF F ++SA E +AEELVEMFK+E++LKRLL++EL++ S   
Sbjct: 153 FSGTKEDSNDAGDCGGIPVFNFWNVSAFEKMAEELVEMFKREVMLKRLLIMELISLSTEV 212

Query: 225 KEQSNQLCWEDELYHGEADDLNMCNLYSKDTAEAFHPKISGWKSKTSNVESEKNPNHDVL 284
            +  N   W DELYHGE D L  C+LYS + A+   P++  +   +S++     P  ++L
Sbjct: 213 PQPINN-SWSDELYHGEFDHLTKCSLYSMEVAKPVLPRVKDYNIGSSSISHTNQPTAEIL 272

Query: 285 QVYLTTWLAEVNIDTFRVEEIFVTVEEELRTSF 318
           Q+YLTTWLAEVNIDT RV+EI   V EE+R +F
Sbjct: 273 QIYLTTWLAEVNIDTHRVDEILALVGEEIRVTF 303

The following BLAST results are available for this feature:

BLAST of Spo05254.1 vs. NCBI nr
BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
BLAST of Spo05254.1 vs. ExPASy Swiss-Prot
BLAST of Spo05254.1 vs. TAIR (Arabidopsis)

BLAST of Spo05254.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731365997\|ref\|XP_010694827.1\|	9.1e-114	73.3	PREDICTED: uncharacterized pro...	[more]
gi\|731425481\|ref\|XP_010663265.1\|	3.2e-90	61.0	PREDICTED: uncharacterized pro...	[more]
gi\|731425489\|ref\|XP_010663270.1\|	8.6e-88	59.0	PREDICTED: uncharacterized pro...	[more]
gi\|902165985\|gb\|KNA07184.1\|	3.3e-87	100.	hypothetical protein SOVF_1742...	[more]
gi\|731366003\|ref\|XP_010694831.1\|	8.9e-85	75.2	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8BDN8_BETVU	6.4e-114	73.3	Uncharacterized protein OS=Bet...	[more]
D7SI28_VITVI	2.2e-90	61.0	Putative uncharacterized prote...	[more]
D7SI27_VITVI	6.0e-88	59.0	Putative uncharacterized prote...	[more]
A0A0K9QIV7_SPIOL	2.3e-87	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B9U7_BETVU	6.2e-85	75.2	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo05254.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo05254.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G07950.1	6.1e-76	54.9	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15827	FAMILY NOT NAMED	coord: 2..242 score: 6.1E-59coord: 282..318 score: 6.1

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11626	0.67	Barchart \| Table