Spo05319 (gene)

Overview
NameSpo05319
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRPM1 interacting protein 4 transcript protein
LocationSpoScf_02108 : 58715 .. 62549 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCGTACACCAGAAGTTTAAGATACTCTAACCGAACAAAATTCTCCCTAAAAGGAGAAGAATTCGTGTTGCTTAATTGCGTAAACAAGACAGTTAACCGCCAAAATTTCCTGCCAGTAAACTTGGAAGAAGGTTTAAAATTGAAGACCCTGTTTGGCTAAAGGCCCCACTAAGACTAAGCCAGTATATTGTCACCAGTTAATACGGTCGGGGTCAATGTGTTTGTCCCCCCACTCCCCAAACGCGGTGGGTTACCTTCTTCGTTGGCTTCTCCACACTAAATATCTGGAATTTATTGCACTCTTTTCTTCCCTTTTCTTATTCTCTCTCATCAACATTTTCTTCTCAAACATTAAAATTCATAATCTTCTTTATTTTATTATTAGCAAAAAGAAAAAAAAGGAAAAAAGTTGCAGCTTCCAGCAAATTAAACATGGCAGTGAGTAATTGAGTATTAATCTTTTCTTTCTTTGTTAATGTATTTGAATTTTCTGGGTTTTTTTTTTGCTTAAATTTATGATTATGATTTATATCTGTTGCTATCTGAATTATGCTTTTTTGCTTTATTTATTTATTATGTGGGGAGATTTTAGTTCATGGTAATATAAGTAACTATAACTTTGATTTACTGGTAATTTGGGTTTAATTTTTTGTAATTAAGCTTGTTTTTCCATTTATTATAGTTGTCAAATGTCAGTAAACTCTATATTGAAAATATTACACAAACAAGATACAGGGATCAAACCTATGACCTAGTGTAAGTAGGCACTTGATCATCACACCAAGAATCAATACACTGTACTTTCTAAAAAATGTTATCAATTTCTGTGTTAGTTAGTTAGTTATTCTTAGATGATTTGGGGAAGAAATGTTATAGCTCTAAATTTGATGGGTTTTCTTCATAAGGTTCAAGAACATAGTTTTTCAACTCTGTGGAAGAAATGTTAGGTTGTAATATTTCTGTACTTGCCCCTTGACAATTGAAAAAGAAACTAATCAAGTTCTTAAACAGTGATGTGTAATCTTCAATATTTTCTGTCTTTGCATTGGCTCTTCTGTAGTGAGTCATACGTCTTGATTAGCTGCGCATCAGTGGAGTTGCTATCCAGGAATATTAAAATTTGTCTTACTGTCTTAGATCAAGTAGGGATGTCAATGGGGCGGGGCAGATGCGGATGCGGATGTATGTTCCTCCATCCCCATCCCCACCTAAAATTTCCATCCCCTTCCCCGCCCTAACGGGTACAAACTAAAATCCATCCCCGCCCCACCACCCGCCTGGGTATCCATCCCCGTCTCATCCCCGCCCCATATCCGCGTCAATACCCACCTTGTTTTTCTTATTTCGCCAACATTATGGAAAAAAGTAACTTCCATAACAAAAAAATTCAAACACATAAAATTAAAAGTCTCGCAATTTGAATATTTATTGAAAATCTAAAGAACATTGAGAATGATTTCAATGTACATTTACTAGTGAAATATTTAAACTATACGTTCTATGGATTTGAACTATATGTTCATTAGCTATATGTTCTTTGGGTATGAACAATATGTTATTTGTATTTGAACTATATGTTCATTTAAAAACAGGGTGCACAGTGAGCATTGTGCACCCGGGTGTATAAACCATCTTTTGTAAAAGTCTTGCCTTAATTCATAATATTACATACTACAACCCAATCCAAAAGCATTAAAAAAATTGTTCAACTTTTTATGTTCTTTAAAATTTTCAATTCACGTGGGGAATGATATTCGGATAGGGTTGACGAGTATCAAGCGGGCGGGAGGATAGAGCGGGTCCAACACAAAATCCACACCCGCCCCATCACCTATGGCGGATGTGATTTTTATACCCATCACCCGCCAAACCTCCCTCTATCCCCGCCTACTTGGGGCGGATGCGGGGCGGGTCTCCCATAAAACCCGCCCCACTGACATCCCTTAGANACTTGGGGCGGATGCGGGGCGGGTCTCCCATAAAACCCGCCCCACTGACATCCCTTAGATGTGTTCAAATGCAGGCTGTTAAGCTAGAATATATACTGTTTTTATCCCACTATTTGCTGGATTTTTCCTACATTTTAAGAGGAAATGAGACAAATGAAGAGCGGTTGTTGAGCTAATCTTGGAGAGTTGTTGGTGTGAACAAATAAAATAGTAGTACCTCTTTTCTAGGTTTTATACATTGAAAGGATTGTGGAGTTGAAACTCTGTACCTTATCGGACTTTTTCTTAACTTTTACTGATCTTAATTAGTACTAATGAAGGTTTTTGAAACATATATTCACGGTGAGTTTCTGATAAATGTATCATCCCGTGGCAGCGAACAAATGTGCCAAAGTTTGGAAATTGGGAGACAGAAGAAGATATCCCATACACGGCCTATTTTGAAAATCCAAGAAGGGTTTCTTCTAGTGAAAAGGTGAACCCAAATAAGTCTCCTGATAATCCTAATTTGGTGTCGAGATTTGAAGCACGAAGAGGATCAGAAAAACAGGAACACATGGTAAAGCAGGAAGATGGTGAACATAATGTAAGGTCATATGATTCCCCATCACGCCCTAATGGAGGACGTAGAGCTTCAGTCAATTCACCCAAAAGAGTTGCAAGGATAAATGGAGGAGGGTTTCGCAGTGCTGACAATTCCCCTATGCATCCACATTACCAGGCAAAGAAAGGAAGCACGGTTTCTTCTCCTTCACGGGAAAGGAAGGGTCCTTCGGATGGAAATGGAAATCTTGGTTTGGCTCCATCCACTCCTGGAAGGTCCCGTCTGAGAACTGTTGTTCGAGGCAATGAAACTGTAAGAAGTTTTTCTTTCTTCTTATGGTCTTCAATTATGTACAAAATTAACAACCATCCACTACCTGACTATGCGAAGATTGATCCTACTATGCTAGGTTACTCAAATCCTTCATTTTTGAGCCATGAACTTGAACTTTCCATAGAATGACCATATACACTTCATGGTTTTACTCTTGTAGGCTTGTAGCTGTCTCTGAATTATATATAGGCAATTACACGATTATGCTACTGTTGTCAGACTCAAAACTTGGGTGGTTATAAGAAATGTATGCTACTATCTGTTCTTTCATTGTCTGTTCATCTTAAACCTTTATGTCCATGGAATCTTGCTCATGTCTTCTCAACAACTAGCCTGTTCTTCACAGCGAAAGCTTCTTTCAGTCCTTAGGTGAACCATTAGCTGTCCGCCAGGATACTCACAGATTGACCACAGCTTACATGAAAATGTTTCTCCCATTAGTATTCCATGTAAGATCTTGTAGGTTAATTTACATGCATAGGTTAAGGTTAATTGTTGAAATATATGTTTTGACTTTTGAGAATTGTTAGCATATATAATAATAATAATAATATTGCAGCCTGATCGAGGTGCTTCTGTTCCGAAATTTGGGGAATGGGATGAGACAGACCCTTCATCAGCCGATGGATTCACACACATTTTCAACAAAGTGAAAGAGGAGAGGCACGGCAGCACAGGAGATTCGAATGCTACAGCAGTTCAAACCCAACAATCTGATAAAAGTAAAAAGTCCAAATCCAAGGTATGTTTCTTTTGTAATCCTAAAATATTATGTACTTTTATGATTGTTGCCGTTGGCTGTTTGAAGCCAACTTTGTTTTTTTTCTCTATCTCTCTCTCAGGGTTGCGGGTGCTTTCCTTGGTAAGGAAACTGATGCAGCTACTTGCATATATTCATTCTTTGTGAAAACGTTACGTTTGTCTGTTGTATACCATGAAATTTTGTTCCATTTCATTCTTTCTAATGTGAATTCTATCATCAGTATAAAATCAGTGGCTAAAGTAAAA

mRNA sequence

CCTCGTACACCAGAAGTTTAAGATACTCTAACCGAACAAAATTCTCCCTAAAAGGAGAAGAATTCGTGTTGCTTAATTGCGTAAACAAGACAGTTAACCGCCAAAATTTCCTGCCAGTAAACTTGGAAGAAGGTTTAAAATTGAAGACCCTGTTTGGCTAAAGGCCCCACTAAGACTAAGCCAGTATATTGTCACCAGTTAATACGGTCGGGGTCAATGTGTTTGTCCCCCCACTCCCCAAACGCGGTGGGTTACCTTCTTCGTTGGCTTCTCCACACTAAATATCTGGAATTTATTGCACTCTTTTCTTCCCTTTTCTTATTCTCTCTCATCAACATTTTCTTCTCAAACATTAAAATTCATAATCTTCTTTATTTTATTATTAGCAAAAAGAAAAAAAAGGAAAAAAGTTGCAGCTTCCAGCAAATTAAACATGGCACGAACAAATGTGCCAAAGTTTGGAAATTGGGAGACAGAAGAAGATATCCCATACACGGCCTATTTTGAAAATCCAAGAAGGGTTTCTTCTAGTGAAAAGGTGAACCCAAATAAGTCTCCTGATAATCCTAATTTGGTGTCGAGATTTGAAGCACGAAGAGGATCAGAAAAACAGGAACACATGGTAAAGCAGGAAGATGGTGAACATAATGTAAGGTCATATGATTCCCCATCACGCCCTAATGGAGGACGTAGAGCTTCAGTCAATTCACCCAAAAGAGTTGCAAGGATAAATGGAGGAGGGTTTCGCAGTGCTGACAATTCCCCTATGCATCCACATTACCAGGCAAAGAAAGGAAGCACGGTTTCTTCTCCTTCACGGGAAAGGAAGGGTCCTTCGGATGGAAATGGAAATCTTGGTTTGGCTCCATCCACTCCTGGAAGGTCCCGTCTGAGAACTGTTGTTCGAGGCAATGAAACTCCTGATCGAGGTGCTTCTGTTCCGAAATTTGGGGAATGGGATGAGACAGACCCTTCATCAGCCGATGGATTCACACACATTTTCAACAAAGTGAAAGAGGAGAGGCACGGCAGCACAGGAGATTCGAATGCTACAGCAGTTCAAACCCAACAATCTGATAAAAGTAAAAAGTCCAAATCCAAGGGTTGCGGGTGCTTTCCTTGGTAAGGAAACTGATGCAGCTACTTGCATATATTCATTCTTTGTGAAAACGTTACGTTTGTCTGTTGTATACCATGAAATTTTGTTCCATTTCATTCTTTCTAATGTGAATTCTATCATCAGTATAAAATCAGTGGCTAAAGTAAAA

Coding sequence (CDS)

ATGGCACGAACAAATGTGCCAAAGTTTGGAAATTGGGAGACAGAAGAAGATATCCCATACACGGCCTATTTTGAAAATCCAAGAAGGGTTTCTTCTAGTGAAAAGGTGAACCCAAATAAGTCTCCTGATAATCCTAATTTGGTGTCGAGATTTGAAGCACGAAGAGGATCAGAAAAACAGGAACACATGGTAAAGCAGGAAGATGGTGAACATAATGTAAGGTCATATGATTCCCCATCACGCCCTAATGGAGGACGTAGAGCTTCAGTCAATTCACCCAAAAGAGTTGCAAGGATAAATGGAGGAGGGTTTCGCAGTGCTGACAATTCCCCTATGCATCCACATTACCAGGCAAAGAAAGGAAGCACGGTTTCTTCTCCTTCACGGGAAAGGAAGGGTCCTTCGGATGGAAATGGAAATCTTGGTTTGGCTCCATCCACTCCTGGAAGGTCCCGTCTGAGAACTGTTGTTCGAGGCAATGAAACTCCTGATCGAGGTGCTTCTGTTCCGAAATTTGGGGAATGGGATGAGACAGACCCTTCATCAGCCGATGGATTCACACACATTTTCAACAAAGTGAAAGAGGAGAGGCACGGCAGCACAGGAGATTCGAATGCTACAGCAGTTCAAACCCAACAATCTGATAAAAGTAAAAAGTCCAAATCCAAGGGTTGCGGGTGCTTTCCTTGGTAA

Protein sequence

MARTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKVNPNKSPDNPNLVSRFEARRGSEKQEHMVKQEDGEHNVRSYDSPSRPNGGRRASVNSPKRVARINGGGFRSADNSPMHPHYQAKKGSTVSSPSRERKGPSDGNGNLGLAPSTPGRSRLRTVVRGNETPDRGASVPKFGEWDETDPSSADGFTHIFNKVKEERHGSTGDSNATAVQTQQSDKSKKSKSKGCGCFPW
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo05319.1Spo05319.1mRNA


Homology
[Close]
BLAST of Spo05319.1 vs. NCBI nr
Match: gi|902235558|gb|KNA23973.1| (hypothetical protein SOVF_019760 [Spinacia oleracea])

HSP 1 Score: 463.4 bits (1191), Expect = 2.300e-127
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1 

		  

Query: 1   MARTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKVNPNKSPDNPNLVSRFEARRGSEKQ 60
           MARTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKVNPNKSPDNPNLVSRFEARRGSEKQ
Sbjct: 1   MARTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKVNPNKSPDNPNLVSRFEARRGSEKQ 60

Query: 61  EHMVKQEDGEHNVRSYDSPSRPNGGRRASVNSPKRVARINGGGFRSADNSPMHPHYQAKK 120
           EHMVKQEDGEHNVRSYDSPSRPNGGRRASVNSPKRVARINGGGFRSADNSPMHPHYQAKK
Sbjct: 61  EHMVKQEDGEHNVRSYDSPSRPNGGRRASVNSPKRVARINGGGFRSADNSPMHPHYQAKK 120

Query: 121 GSTVSSPSRERKGPSDGNGNLGLAPSTPGRSRLRTVVRGNETPDRGASVPKFGEWDETDP 180
           GSTVSSPSRERKGPSDGNGNLGLAPSTPGRSRLRTVVRGNETPDRGASVPKFGEWDETDP
Sbjct: 121 GSTVSSPSRERKGPSDGNGNLGLAPSTPGRSRLRTVVRGNETPDRGASVPKFGEWDETDP 180

Query: 181 SSADGFTHIFNKVKEERHGSTGDSNATAVQTQQSDKSKKSKSKGCGCFPW 231
           SSADGFTHIFNKVKEERHGSTGDSNATAVQTQQSDKSKKSKSKGCGCFPW
Sbjct: 181 SSADGFTHIFNKVKEERHGSTGDSNATAVQTQQSDKSKKSKSKGCGCFPW 230
[Close]
BLAST of Spo05319.1 vs. NCBI nr
Match: gi|731325245|ref|XP_010673411.1| (PREDICTED: RPM1-interacting protein 4 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 284.3 bits (726), Expect = 1.900e-73
Identity = 158/254 (62.20%), Postives = 189/254 (74.41%), Query Frame = 1 

		  

Query: 1   MARTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKVNPNKSPDNPN-LVSRFEARRGSE- 60
           MAR+NVP+FGNW+TEE++PYT YFEN RRVS SEKVNPN SPD+ + L S+ E R+  E 
Sbjct: 1   MARSNVPEFGNWKTEENVPYTTYFENARRVSFSEKVNPNSSPDDDSTLASKLEGRKRFEA 60

Query: 61  ---KQEHMVKQEDGEHNVRSYDSPSRPNGGRRASVNS------------PKRVARINGGG 120
              K ++MV QEDGE   +S DSPSRP+GG + S NS            PKR A  N  G
Sbjct: 61  MRAKHDNMVSQEDGELQ-KSSDSPSRPDGGHKTSTNSTHSRPGGVSSDTPKRAALANKVG 120

Query: 121 FRSADNSPMHPHYQAK----KGSTVSSPSRERKGPSDGNGNLGLAPSTPGRSRLRTVVRG 180
           FRSAD+SP+HPHYQAK    KG+  SSPS E+KG S+G+   GLAPSTPGRSRL++V RG
Sbjct: 121 FRSADHSPLHPHYQAKISGAKGNAASSPSWEKKGSSEGSH--GLAPSTPGRSRLKSVPRG 180

Query: 181 NETPDRGASVPKFGEWDETDPSSADGFTHIFNKVKEERHGSTGDSNATAVQTQQSDKSKK 231
           NETPDRGASVPKFG+WDETDPSSADGF+HIFNKVKEERHG  G++  TA +++ SD  K 
Sbjct: 181 NETPDRGASVPKFGDWDETDPSSADGFSHIFNKVKEERHGGVGNAPGTATRSKDSDGQKL 240
[Close]
BLAST of Spo05319.1 vs. NCBI nr
Match: gi|848888877|ref|XP_012844621.1| (PREDICTED: RPM1-interacting protein 4-like [Erythranthe guttata])

HSP 1 Score: 174.1 bits (440), Expect = 2.800e-40
Identity = 109/275 (39.64%), Postives = 149/275 (54.18%), Query Frame = 1 

		  

Query: 3   RTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKVNPNKSPDNPNLVS------------- 62
           R  VPKFGNWE+EE++PYT YF+N R+   S ++    S DN    S             
Sbjct: 79  RAQVPKFGNWESEEEVPYTMYFDNARKGKKSGQIYQTDSQDNIEKSSESKTRNHERHSSR 138

Query: 63  ---RFEARRGSEKQEHMVKQEDGEHNV------RSYDSPSRPNGGRRASV---------- 122
                EA +G+ K+++   ++  E  V      R    PSR  G  R ++          
Sbjct: 139 EEEESEAIKGTHKRQNHGNEDKSERRVPEALRKRHERGPSREEGEMRRAIMDSPLRNSSS 198

Query: 123 ---------NSPKRVARINGGGFRSADNSPMHPHYQA---KKGSTVSSPSRERKGPSDGN 182
                     +PKRVA   G G    D SP HP+ +       + +SSPS ERKG S+G+
Sbjct: 199 NSPRHRLGGETPKRVAARQGLG---PDQSPHHPNSRVGGKNNNNGISSPSWERKGASEGS 258

Query: 183 GNLGLAPSTPGRSRLRTVVRGNETPDRGASVPKFGEWDETDPSSADGFTHIFNKVKEERH 231
            + GLAP TPGRSRLR+V RG+++PDR  +VPKFG+WDETDP+SA+G+T +FN+V+EE+H
Sbjct: 259 SHHGLAPLTPGRSRLRSVTRGDDSPDRSPAVPKFGDWDETDPASAEGYTQVFNRVREEKH 318
[Close]
BLAST of Spo05319.1 vs. NCBI nr
Match: gi|604320527|gb|EYU31469.1| (hypothetical protein MIMGU_mgv1a009098mg [Erythranthe guttata])

HSP 1 Score: 174.1 bits (440), Expect = 2.800e-40
Identity = 109/275 (39.64%), Postives = 149/275 (54.18%), Query Frame = 1 

		  

Query: 3   RTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKVNPNKSPDNPNLVS------------- 62
           R  VPKFGNWE+EE++PYT YF+N R+   S ++    S DN    S             
Sbjct: 22  RAQVPKFGNWESEEEVPYTMYFDNARKGKKSGQIYQTDSQDNIEKSSESKTRNHERHSSR 81

Query: 63  ---RFEARRGSEKQEHMVKQEDGEHNV------RSYDSPSRPNGGRRASV---------- 122
                EA +G+ K+++   ++  E  V      R    PSR  G  R ++          
Sbjct: 82  EEEESEAIKGTHKRQNHGNEDKSERRVPEALRKRHERGPSREEGEMRRAIMDSPLRNSSS 141

Query: 123 ---------NSPKRVARINGGGFRSADNSPMHPHYQA---KKGSTVSSPSRERKGPSDGN 182
                     +PKRVA   G G    D SP HP+ +       + +SSPS ERKG S+G+
Sbjct: 142 NSPRHRLGGETPKRVAARQGLG---PDQSPHHPNSRVGGKNNNNGISSPSWERKGASEGS 201

Query: 183 GNLGLAPSTPGRSRLRTVVRGNETPDRGASVPKFGEWDETDPSSADGFTHIFNKVKEERH 231
            + GLAP TPGRSRLR+V RG+++PDR  +VPKFG+WDETDP+SA+G+T +FN+V+EE+H
Sbjct: 202 SHHGLAPLTPGRSRLRSVTRGDDSPDRSPAVPKFGDWDETDPASAEGYTQVFNRVREEKH 261
[Close]
BLAST of Spo05319.1 vs. NCBI nr
Match: gi|720057661|ref|XP_010274042.1| (PREDICTED: RPM1-interacting protein 4-like [Nelumbo nucifera])

HSP 1 Score: 168.7 bits (426), Expect = 1.200e-38
Identity = 113/262 (43.13%), Postives = 151/262 (57.63%), Query Frame = 1 

		  

Query: 3   RTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKV-NPNKSPDNPNLVSR-------FEAR 62
           R+NVPKFGNWE+E ++PYTAYF+  R+  S+ K+ NPN   +NP+L S          +R
Sbjct: 4   RSNVPKFGNWESEGNVPYTAYFDKARKGRSTGKIINPNDPQENPDLFSDTPPVRADLPSR 63

Query: 63  RGSE---------KQEHMVKQEDGEHNVRSYDSPSRPNGGRRA--------------SVN 122
            G+E         K EH   +ED +   +  +SP     GRRA              S  
Sbjct: 64  TGAELEGPGDEKPKHEHRSSKEDADAR-KVTESPEHETEGRRAADLPHQRAGDRGVSSGE 123

Query: 123 SPKRVARINGGGFRSADNSPMHPHYQAKKGST--VSSPSRERKGPSDGNGNLGLAPSTPG 182
           +PK+V+R  GG  RS + SP+HPHYQAK  +   VSSPS E+K     +   GLAP+TPG
Sbjct: 124 TPKKVSRPVGGSDRSVEQSPLHPHYQAKAANKTGVSSPSWEKK----SDHGHGLAPATPG 183

Query: 183 RSRLRTVVRGNETPDRGASVPKFGEWDETDPSSADGFTHIFNKVKEERHGSTGDSNATAV 229
           RSRLR   RG+ET +RG +VPKFG+WDE +P+SADG+THIFNKV+EE+          + 
Sbjct: 184 RSRLRP--RGDETFERGPAVPKFGDWDENNPASADGYTHIFNKVREEKQSGAAKVPVIST 243
[Close]
BLAST of Spo05319.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWZ2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_019760 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 1.600e-127
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1 

		  

Query: 1   MARTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKVNPNKSPDNPNLVSRFEARRGSEKQ 60
           MARTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKVNPNKSPDNPNLVSRFEARRGSEKQ
Sbjct: 1   MARTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKVNPNKSPDNPNLVSRFEARRGSEKQ 60

Query: 61  EHMVKQEDGEHNVRSYDSPSRPNGGRRASVNSPKRVARINGGGFRSADNSPMHPHYQAKK 120
           EHMVKQEDGEHNVRSYDSPSRPNGGRRASVNSPKRVARINGGGFRSADNSPMHPHYQAKK
Sbjct: 61  EHMVKQEDGEHNVRSYDSPSRPNGGRRASVNSPKRVARINGGGFRSADNSPMHPHYQAKK 120

Query: 121 GSTVSSPSRERKGPSDGNGNLGLAPSTPGRSRLRTVVRGNETPDRGASVPKFGEWDETDP 180
           GSTVSSPSRERKGPSDGNGNLGLAPSTPGRSRLRTVVRGNETPDRGASVPKFGEWDETDP
Sbjct: 121 GSTVSSPSRERKGPSDGNGNLGLAPSTPGRSRLRTVVRGNETPDRGASVPKFGEWDETDP 180

Query: 181 SSADGFTHIFNKVKEERHGSTGDSNATAVQTQQSDKSKKSKSKGCGCFPW 231
           SSADGFTHIFNKVKEERHGSTGDSNATAVQTQQSDKSKKSKSKGCGCFPW
Sbjct: 181 SSADGFTHIFNKVKEERHGSTGDSNATAVQTQQSDKSKKSKSKGCGCFPW 230
[Close]
BLAST of Spo05319.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CMU3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g065750 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.400e-73
Identity = 158/254 (62.20%), Postives = 189/254 (74.41%), Query Frame = 1 

		  

Query: 1   MARTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKVNPNKSPDNPN-LVSRFEARRGSE- 60
           MAR+NVP+FGNW+TEE++PYT YFEN RRVS SEKVNPN SPD+ + L S+ E R+  E 
Sbjct: 1   MARSNVPEFGNWKTEENVPYTTYFENARRVSFSEKVNPNSSPDDDSTLASKLEGRKRFEA 60

Query: 61  ---KQEHMVKQEDGEHNVRSYDSPSRPNGGRRASVNS------------PKRVARINGGG 120
              K ++MV QEDGE   +S DSPSRP+GG + S NS            PKR A  N  G
Sbjct: 61  MRAKHDNMVSQEDGELQ-KSSDSPSRPDGGHKTSTNSTHSRPGGVSSDTPKRAALANKVG 120

Query: 121 FRSADNSPMHPHYQAK----KGSTVSSPSRERKGPSDGNGNLGLAPSTPGRSRLRTVVRG 180
           FRSAD+SP+HPHYQAK    KG+  SSPS E+KG S+G+   GLAPSTPGRSRL++V RG
Sbjct: 121 FRSADHSPLHPHYQAKISGAKGNAASSPSWEKKGSSEGSH--GLAPSTPGRSRLKSVPRG 180

Query: 181 NETPDRGASVPKFGEWDETDPSSADGFTHIFNKVKEERHGSTGDSNATAVQTQQSDKSKK 231
           NETPDRGASVPKFG+WDETDPSSADGF+HIFNKVKEERHG  G++  TA +++ SD  K 
Sbjct: 181 NETPDRGASVPKFGDWDETDPSSADGFSHIFNKVKEERHGGVGNAPGTATRSKDSDGQKL 240
[Close]
BLAST of Spo05319.1 vs. UniProtKB/TrEMBL
Match: A0A022QV95_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a009098mg PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.000e-40
Identity = 109/275 (39.64%), Postives = 149/275 (54.18%), Query Frame = 1 

		  

Query: 3   RTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKVNPNKSPDNPNLVS------------- 62
           R  VPKFGNWE+EE++PYT YF+N R+   S ++    S DN    S             
Sbjct: 22  RAQVPKFGNWESEEEVPYTMYFDNARKGKKSGQIYQTDSQDNIEKSSESKTRNHERHSSR 81

Query: 63  ---RFEARRGSEKQEHMVKQEDGEHNV------RSYDSPSRPNGGRRASV---------- 122
                EA +G+ K+++   ++  E  V      R    PSR  G  R ++          
Sbjct: 82  EEEESEAIKGTHKRQNHGNEDKSERRVPEALRKRHERGPSREEGEMRRAIMDSPLRNSSS 141

Query: 123 ---------NSPKRVARINGGGFRSADNSPMHPHYQA---KKGSTVSSPSRERKGPSDGN 182
                     +PKRVA   G G    D SP HP+ +       + +SSPS ERKG S+G+
Sbjct: 142 NSPRHRLGGETPKRVAARQGLG---PDQSPHHPNSRVGGKNNNNGISSPSWERKGASEGS 201

Query: 183 GNLGLAPSTPGRSRLRTVVRGNETPDRGASVPKFGEWDETDPSSADGFTHIFNKVKEERH 231
            + GLAP TPGRSRLR+V RG+++PDR  +VPKFG+WDETDP+SA+G+T +FN+V+EE+H
Sbjct: 202 SHHGLAPLTPGRSRLRSVTRGDDSPDRSPAVPKFGDWDETDPASAEGYTQVFNRVREEKH 261
[Close]
BLAST of Spo05319.1 vs. UniProtKB/TrEMBL
Match: A0A022QW03_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a009098mg PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.000e-40
Identity = 109/275 (39.64%), Postives = 149/275 (54.18%), Query Frame = 1 

		  

Query: 3   RTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKVNPNKSPDNPNLVS------------- 62
           R  VPKFGNWE+EE++PYT YF+N R+   S ++    S DN    S             
Sbjct: 79  RAQVPKFGNWESEEEVPYTMYFDNARKGKKSGQIYQTDSQDNIEKSSESKTRNHERHSSR 138

Query: 63  ---RFEARRGSEKQEHMVKQEDGEHNV------RSYDSPSRPNGGRRASV---------- 122
                EA +G+ K+++   ++  E  V      R    PSR  G  R ++          
Sbjct: 139 EEEESEAIKGTHKRQNHGNEDKSERRVPEALRKRHERGPSREEGEMRRAIMDSPLRNSSS 198

Query: 123 ---------NSPKRVARINGGGFRSADNSPMHPHYQA---KKGSTVSSPSRERKGPSDGN 182
                     +PKRVA   G G    D SP HP+ +       + +SSPS ERKG S+G+
Sbjct: 199 NSPRHRLGGETPKRVAARQGLG---PDQSPHHPNSRVGGKNNNNGISSPSWERKGASEGS 258

Query: 183 GNLGLAPSTPGRSRLRTVVRGNETPDRGASVPKFGEWDETDPSSADGFTHIFNKVKEERH 231
            + GLAP TPGRSRLR+V RG+++PDR  +VPKFG+WDETDP+SA+G+T +FN+V+EE+H
Sbjct: 259 SHHGLAPLTPGRSRLRSVTRGDDSPDRSPAVPKFGDWDETDPASAEGYTQVFNRVREEKH 318
[Close]
BLAST of Spo05319.1 vs. UniProtKB/TrEMBL
Match: F6HRH5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0231g00040 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.500e-37
Identity = 112/263 (42.59%), Postives = 150/263 (57.03%), Query Frame = 1 

		  

Query: 3   RTNVPKFGNWETEEDIPYTAYFENPRRVSSSEKV-NPNKSPDNPNLVS------RFEARR 62
           R++VPKFGNWE+EE++PYTAYF+  R+  +  K+ NPN   +NP++ S      R   R 
Sbjct: 4   RSHVPKFGNWESEENVPYTAYFDKARKGRTGTKIINPNDPQENPDMFSDNASEARSPPRT 63

Query: 63  GSEKQE---------HMVKQEDGEHNVRSYDSPSR-PNGGRRASVNSPK----------- 122
            +E++E         H + +EDG+   +  DSP+R  N GRR S  S             
Sbjct: 64  RAEQEESIGQQVTHEHRLSKEDGDQK-QVTDSPARNDNLGRRPSTESTHQRQGGRGMNSG 123

Query: 123 ---RVARINGGGFRSADNSPMHPHYQAK-KGSTVSSPSRERKGPSDGNGNLGLAPSTPGR 182
              R  R +GG   S D SP+HPH+QA+  G    SPS E KG S  + +      TPGR
Sbjct: 124 ETYRKPRTSGGSEHSIDRSPLHPHHQARIAGRGTGSPSWEGKGSSYDSSH-----GTPGR 183

Query: 183 SRLRTVVRGNETPDRGASVPKFGEWDETDPSSADGFTHIFNKVKEERHGSTG---DSNAT 231
           SR++   RG+E+PD+GA+VPKFG+WDE +PSSADG+THIFNKV+EER           A+
Sbjct: 184 SRMKPT-RGDESPDKGAAVPKFGDWDENNPSSADGYTHIFNKVREERQTGAATRVPGMAS 243
[Close]
BLAST of Spo05319.1 vs. ExPASy Swiss-Prot
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.400e-23
Identity = 82/230 (35.65%), Postives = 113/230 (49.13%), Query Frame = 1 

		  

Query: 1   MARTNVPKFGNWETEEDIPYTAYFENPR--RVSSSEKVNPNKSPDNPNLVSRFEARRGSE 60
           MAR+NVPKFGNWE EE++PYTAYF+  R  R   S+ +NPN    +P   S  +++    
Sbjct: 1   MARSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPN----DPEYNSDSQSQAPPH 60

Query: 61  KQEHMVKQEDGEHNVRSYDSPSRPNGGRRASVNSPKRVARINGGGFRSADNSPMHPHYQA 120
                 K E         D+  R     R+   S  +     GG    A N         
Sbjct: 61  PPSSRTKPEQ-------VDTVRRSREHMRSREESELKQFGDAGGSSNEAANK-------- 120

Query: 121 KKGSTVSSPSRERKGPSDGNGNLGLAPSTPGRSRLRTVVRGNETPDRGASVPKFGEWDET 180
           ++G    + S + K P   N   G   S P  + LR     +E+P++   VPKFG+WDE 
Sbjct: 121 RQGRASQNNSYDNKSPLHKNSYDGTGKSRPKPTNLRA----DESPEKVTVVPKFGDWDEN 180

Query: 181 DPSSADGFTHIFNKVKEERHGSTGDSNATAVQTQQSDKSKKSKSKGCGCF 229
           +PSSADG+THIFNKV+EER      S ++   T QS ++  + S  C CF
Sbjct: 181 NPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRNPNNTS-SCCCF 206
[Close]
BLAST of Spo05319.1 vs. TAIR (Arabidopsis)
Match: AT3G25070.1 (RPM1 interacting protein 4)

HSP 1 Score: 110.5 bits (275), Expect = 1.400e-24
Identity = 82/230 (35.65%), Postives = 113/230 (49.13%), Query Frame = 1 

		  

Query: 1   MARTNVPKFGNWETEEDIPYTAYFENPR--RVSSSEKVNPNKSPDNPNLVSRFEARRGSE 60
           MAR+NVPKFGNWE EE++PYTAYF+  R  R   S+ +NPN    +P   S  +++    
Sbjct: 1   MARSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPN----DPEYNSDSQSQAPPH 60

Query: 61  KQEHMVKQEDGEHNVRSYDSPSRPNGGRRASVNSPKRVARINGGGFRSADNSPMHPHYQA 120
                 K E         D+  R     R+   S  +     GG    A N         
Sbjct: 61  PPSSRTKPEQ-------VDTVRRSREHMRSREESELKQFGDAGGSSNEAANK-------- 120

Query: 121 KKGSTVSSPSRERKGPSDGNGNLGLAPSTPGRSRLRTVVRGNETPDRGASVPKFGEWDET 180
           ++G    + S + K P   N   G   S P  + LR     +E+P++   VPKFG+WDE 
Sbjct: 121 RQGRASQNNSYDNKSPLHKNSYDGTGKSRPKPTNLRA----DESPEKVTVVPKFGDWDEN 180

Query: 181 DPSSADGFTHIFNKVKEERHGSTGDSNATAVQTQQSDKSKKSKSKGCGCF 229
           +PSSADG+THIFNKV+EER      S ++   T QS ++  + S  C CF
Sbjct: 181 NPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRNPNNTS-SCCCF 206
[Close]
BLAST of Spo05319.1 vs. TAIR (Arabidopsis)
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.200e-7
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 1 

		  

Query: 164 DRGASVPKFGEWDETDPSSADGFTHIFNKVKEERHG 200
           D+G  +PKFGEWD  DPSSA+GFT IFNK + E+ G
Sbjct: 3   DKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKG 38
[Close]
BLAST of Spo05319.1 vs. TAIR (Arabidopsis)
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.500e-7
Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 1 

		  

Query: 164 DRGASVPKFGEWDETDPSSADGFTHIFNKVKEERH-----GSTGDSNATAVQTQQSDKSK 223
           D+G  +PKFGEWD  DP+SA+GFT IFNK ++E+      GS G S+   V++   D SK
Sbjct: 19  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 78
[Close]
BLAST of Spo05319.1 vs. TAIR (Arabidopsis)
Match: AT2G17660.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 48.9 bits (115), Expect = 4.800e-6
Identity = 23/58 (39.66%), Postives = 34/58 (58.62%), Query Frame = 1 

		  

Query: 164 DRGASVPKFGEWDETDPSSADGFTHIFNKVKEERHGSTGDSNATAVQTQQSDKSKKSK 222
           + G ++PKFGEWD  DP++ADGFT IF+K  E++      +   + + Q  DK    K
Sbjct: 5   EAGRALPKFGEWDVNDPATADGFTVIFSKAGEDKKTGRSSTKTNSQRKQDGDKPAVKK 62
[Close]
BLAST of Spo05319.1 vs. TAIR (Arabidopsis)
Match: AT3G48450.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 48.9 bits (115), Expect = 4.800e-6
Identity = 20/36 (55.56%), Postives = 28/36 (77.78%), Query Frame = 1 

		  

Query: 162 TPDRGASVPKFGEWDETDPSSADGFTHIFNKVKEER 198
           T +R   +PKFGEWD T+P SA+GFT IFNK ++++
Sbjct: 3   TGNRARPLPKFGEWDATNPGSAEGFTVIFNKARDDK 38
The following BLAST results are available for this feature:
BLAST of Spo05319.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902235558|gb|KNA23973.1|2.3e-127100.hypothetical protein SOVF_0197... [more]
gi|731325245|ref|XP_010673411.1|1.9e-7362.2PREDICTED: RPM1-interacting pr... [more]
gi|848888877|ref|XP_012844621.1|2.8e-4039.6PREDICTED: RPM1-interacting pr... [more]
gi|604320527|gb|EYU31469.1|2.8e-4039.6hypothetical protein MIMGU_mgv... [more]
gi|720057661|ref|XP_010274042.1|1.2e-3843.1PREDICTED: RPM1-interacting pr... [more]
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BLAST of Spo05319.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RWZ2_SPIOL1.6e-127100.Uncharacterized protein OS=Spi... [more]
A0A0J8CMU3_BETVU1.4e-7362.2Uncharacterized protein OS=Bet... [more]
A0A022QV95_ERYGU2.0e-4039.6Uncharacterized protein OS=Ery... [more]
A0A022QW03_ERYGU2.0e-4039.6Uncharacterized protein OS=Ery... [more]
F6HRH5_VITVI4.5e-3742.5Putative uncharacterized prote... [more]
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BLAST of Spo05319.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RIN4_ARATH2.4e-2335.6RPM1-interacting protein 4 OS=... [more]
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BLAST of Spo05319.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G25070.11.4e-2435.6RPM1 interacting protein 4[more]
AT2G04410.11.2e-763.8RPM1-interacting protein 4 (RI... [more]
AT5G55850.21.5e-746.1RPM1-interacting protein 4 (RI... [more]
AT2G17660.14.8e-639.6RPM1-interacting protein 4 (RI... [more]
AT3G48450.14.8e-655.5RPM1-interacting protein 4 (RI... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 163..198
score: 3.3
NoneNo IPR availablePANTHERPTHR33159FAMILY NOT NAMEDcoord: 1..230
score: 9.5
NoneNo IPR availablePANTHERPTHR33159:SF6RPM1-INTERACTING PROTEIN 4coord: 1..230
score: 9.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0055085 transmembrane transport
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006865 amino acid transport
biological_process GO:0045087 innate immune response
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007020 microtubule nucleation
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0008152 metabolic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005886 plasma membrane
molecular_function GO:0008253 5'-nucleotidase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0015293 symporter activity
RNA-Seq Expression