Spo05338 (gene) | SpinachBase

Overview


Name	Spo05338
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Replication factor C subunit 2
Location	chr6 : 45133828 .. 45136661 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTGCCTGCAATTCAATTGCAAAATGCTGTTTGGGTGTGTTAAATTAGGTGTCCTATGGACCGGTGATTTGAATTTCTACAACAATCCTACTATTTAAGGGAGAATTAGGGTAGATGAAGAAATTGTTAAATTTTGAAGAAGGCGAAATAGAGCTACCACTTAGATTGTGTTATCTTATAAATAGTGTACTCGTTCCACGAGTATTTCATTGGTGGAATCTGTCTCATTTTCAGTTTGTGTATGATGAGGTTATGCATACAGTTGCATTAGCATCTTTATGCTTTAAGCTGCAATTTGACAAACTCCATATGTATGTTCAGGGTCCCCCGGGTACAGGAAAGACAACAAGCATACTAGCTCTTGCACACGAGCTTTTAGGACCAAACTGTAAGGAGGGAGTTCTGGAGTTGAATGCTTCAGATGATAGGTATTTCTGTTGTTCACCCCTGGAAGAATTTATACTGCTCATGAACTGAACTCCCTGAATATTTTCCGCATTTTCCCTTTCCTTTTGATCAGGGGAATTGATGTTGTGAGGAACAAAATTAAGATGTTTGCGCAGAAGAAAGTAACTCTGCCTCCTGGGCGACACAAGATAGTTATATTGGACGAAGCTGACAGGTTACAAATGAACTTTGGTACTCTAATACATGCCTCATTCATCATTTCCGTTTGCTGACACACCTTTTCATAATTTTTTTTGTTTCTTTGTCGAATTGGGTTGAAATAGCATGACATCTGGAGCTCAACAGGCTTTGAGAAGGACAATGGAAATTTACTCAAACACTACTCGCTTTGGTCTTGCATGTAATACTTCTTCAAAAATCATTGAACCCATCCAGAGTAGATGTGCGTTGGTCCGCTTTTCAAGGTTATCAGATCAAGAAATTCTTGGTCGCCTCATGATAGTCATTGAAGCTGAGCAGGTACTCTCTTTTGTCGCTAAATGGTTGGTATTAGCTTTTTATGCAGTTTCTCCTTAATATGATCTTGTTACTGGGGGATAATTATTGGTTTATAAGTTGTGAATCTTGTGATGATCATCACTTAGGCTCATCTAGTTTTCATAGTTCAAATTACACCCATCTGTTCTTATGCGGAAACAACTCCGCATAACTTTAGGCCAGCGTTACCTAATTCACTACCTCCCCCCTTCTCCAAAAAAAAACATGCGAGTTGGTAGTGTGAGTGGTATATTTTTAGACCAATTTAACTGATACTGCGGATTGTATTCCACGAACTACTAGTACAAATCAGGTAAGACTGCTCTAGACATGTTCTGCTTGACGCAATATGCTTATGTTGTATGCTTCCAGACTTCGAGAAGAAAATGATATAGACACCACTATCATTTTTATATTTACAAGAATTCCACTTTAGTGTCCTTGCAAGTTGACTGTGATTTCTTCAGATCGCAATTGACCTTTTCATGTAATGTCTTCGTTTATAGAGTGAACCCTTCCGGTTTAACATTGCTTTTTGGTCTTTGTTAAGTTTTCTAAAAACTGGATTTCTTACTATGATTACTGCAGAATGGTTAGGTTCGTTCTTGTTTCATATCAGTTGTGTTTGTTTTTCCTTCAAATTTCCATGCATTGTATGTTGGTTTTATTGATTTACTATTGCTGAAATAGATTATGTGTGTGTCTGGTGATGAAGGTTCCATATGTTCCAGAAGGTCTTGAAGCCATAATTTTCACTGCTGATGGTGATATGCGGCAAGCTTTGAATAACTTGCAGGCTACCTTCAGTGGATTTCGATTTGTCAACCAAGAAAACGTTTTCAAGGTTGCTTCTGAAAACCATGATTATTTTTAGCTTCAAAAAATTGATGCTTGTTACCTGATTGCGTACTATTTTTTTTCTTTTTCTGACAGGTTTGCGACCAGCCTCATCCTTTGCATGTCAAGAGCATGATTCGAAATGTACTTGAAGGGAAGTTTGATGATGCTTGTTCTGGTATGAAGAACCTCTATGATATGGGTTACTCCCCTACTGACATAATTACAACCCTCTTCCGCGTTGTTAAAAACTATGACATGGCCGAGTATTTGAAGTTGGAATTTATGAAGGTATGAGTGTAGAACTTGTTACTTGACCTTACCATTTCCCAACTTATGGTGCAAGGCCTGATTTCTGTTTATGTTTACAGGAAACTGGGTTTACCCATATGAGAATTTGTGATGGAGTTGGTTCTTATCTTCAGCTATGCGGACTTCTGGCTAAGCTATCACTTATCAGGGAGACAGCTAAAGCAGCCTGATAACTCAGTTAGAAGGTTATAGAGCGGTTCTTTGAGACCTGTTTCCTTTTTTCCGGTAATCTCAGAAAGTGCAGAAAGTTTCTCCTGCCGTTATTTTGTTTCGGAGTTGAAATGCTGTAAGAAAATTGTGTTCCTTGTACGGATTATCTAGGCAGAGCCTCTGACTTGTAGGAATACTTTCGAAGTTGATTTAAATCCAGGCATGCATTTGCTCAAAGAAGACTGAAATCCCGTTACAATTACTGTTGTTATGCTTGCAATTAAAGAAAAAACAAAACACAAAAAACGAGAAGCTAGCCACAAACAAAAGCAATATGTAAAGTCTCAACAAAAATGAAACGTTGGAGGTTGCAATCAAAGATGGGTAAAGAGGAAGCTAGTTTTGTTGAGAGTAGGAGTAAGATCCAAGTCATACGTCACAGTACAGGGTGCTTATAATATGAGCTCAACTCGACTTTAACTCACGAGCTCCGCTCGAATGGACTCGGAAACTCGCAAGCTTGAAATTTTGAAGTTTGACCTGATTCGAGTTCGACTCAAACTAGGCTCGGGTTCAACTAGACATGAGC

mRNA sequence

TGTTGCCTGCAATTCAATTGCAAAATGCTGTTTGGGTGTGTTAAATTAGGTGTCCTATGGACCGGTGATTTGAATTTCTACAACAATCCTACTATTTAAGGGAGAATTAGGGTAGATGAAGAAATTGTTAAATTTTGAAGAAGGCGAAATAGAGCTACCACTTAGATTGTGTTATCTTATAAATAGTGTACTCGTTCCACGAGTATTTCATTGGTGGAATCTGTCTCATTTTCAGTTTGTGTATGATGAGGTTATGCATACAGTTGCATTAGCATCTTTATGCTTTAAGCTGCAATTTGACAAACTCCATATGTATGTTCAGGGTCCCCCGGGTACAGGAAAGACAACAAGCATACTAGCTCTTGCACACGAGCTTTTAGGACCAAACTGTAAGGAGGGAGTTCTGGAGTTGAATGCTTCAGATGATAGGGGAATTGATGTTGTGAGGAACAAAATTAAGATGTTTGCGCAGAAGAAAGTAACTCTGCCTCCTGGGCGACACAAGATAGTTATATTGGACGAAGCTGACAGCATGACATCTGGAGCTCAACAGGCTTTGAGAAGGACAATGGAAATTTACTCAAACACTACTCGCTTTGGTCTTGCATGTAATACTTCTTCAAAAATCATTGAACCCATCCAGAGTAGATGTGCGTTGGTCCGCTTTTCAAGGTTATCAGATCAAGAAATTCTTGGTCGCCTCATGATAGTCATTGAAGCTGAGCAGGTTCCATATGTTCCAGAAGGTCTTGAAGCCATAATTTTCACTGCTGATGGTGATATGCGGCAAGCTTTGAATAACTTGCAGGCTACCTTCAGTGGATTTCGATTTGTCAACCAAGAAAACGTTTTCAAGGTTTGCGACCAGCCTCATCCTTTGCATGTCAAGAGCATGATTCGAAATGTACTTGAAGGGAAGTTTGATGATGCTTGTTCTGGTATGAAGAACCTCTATGATATGGGTTACTCCCCTACTGACATAATTACAACCCTCTTCCGCGTTGTTAAAAACTATGACATGGCCGAGTATTTGAAGTTGGAATTTATGAAGGAAACTGGGTTTACCCATATGAGAATTTGTGATGGAGTTGGTTCTTATCTTCAGCTATGCGGACTTCTGGCTAAGCTATCACTTATCAGGGAGACAGCTAAAGCAGCCTGATAACTCAGTTAGAAGGTTATAGAGCGGTTCTTTGAGACCTGTTTCCTTTTTTCCGGTAATCTCAGAAAGTGCAGAAAGTTTCTCCTGCCGTTATTTTGTTTCGGAGTTGAAATGCTGTAAGAAAATTGTGTTCCTTGTACGGATTATCTAGGCAGAGCCTCTGACTTGTAGGAATACTTTCGAAGTTGATTTAAATCCAGGCATGCATTTGCTCAAAGAAGACTGAAATCCCGTTACAATTACTGTTGTTATGCTTGCAATTAAAGAAAAAACAAAACACAAAAAACGAGAAGCTAGCCACAAACAAAAGCAATATGTAAAGTCTCAACAAAAATGAAACGTTGGAGGTTGCAATCAAAGATGGGTAAAGAGGAAGCTAGTTTTGTTGAGAGTAGGAGTAAGATCCAAGTCATACGTCACAGTACAGGGTGCTTATAATATGAGCTCAACTCGACTTTAACTCACGAGCTCCGCTCGAATGGACTCGGAAACTCGCAAGCTTGAAATTTTGAAGTTTGACCTGATTCGAGTTCGACTCAAACTAGGCTCGGGTTCAACTAGACATGAGC

Coding sequence (CDS)

ATGAAGAAATTGTTAAATTTTGAAGAAGGCGAAATAGAGCTACCACTTAGATTGTGTTATCTTATAAATAGTGTACTCGTTCCACGAGTATTTCATTGGTGGAATCTGTCTCATTTTCAGTTTGTGTATGATGAGGTTATGCATACAGTTGCATTAGCATCTTTATGCTTTAAGCTGCAATTTGACAAACTCCATATGTATGTTCAGGGTCCCCCGGGTACAGGAAAGACAACAAGCATACTAGCTCTTGCACACGAGCTTTTAGGACCAAACTGTAAGGAGGGAGTTCTGGAGTTGAATGCTTCAGATGATAGGGGAATTGATGTTGTGAGGAACAAAATTAAGATGTTTGCGCAGAAGAAAGTAACTCTGCCTCCTGGGCGACACAAGATAGTTATATTGGACGAAGCTGACAGCATGACATCTGGAGCTCAACAGGCTTTGAGAAGGACAATGGAAATTTACTCAAACACTACTCGCTTTGGTCTTGCATGTAATACTTCTTCAAAAATCATTGAACCCATCCAGAGTAGATGTGCGTTGGTCCGCTTTTCAAGGTTATCAGATCAAGAAATTCTTGGTCGCCTCATGATAGTCATTGAAGCTGAGCAGGTTCCATATGTTCCAGAAGGTCTTGAAGCCATAATTTTCACTGCTGATGGTGATATGCGGCAAGCTTTGAATAACTTGCAGGCTACCTTCAGTGGATTTCGATTTGTCAACCAAGAAAACGTTTTCAAGGTTTGCGACCAGCCTCATCCTTTGCATGTCAAGAGCATGATTCGAAATGTACTTGAAGGGAAGTTTGATGATGCTTGTTCTGGTATGAAGAACCTCTATGATATGGGTTACTCCCCTACTGACATAATTACAACCCTCTTCCGCGTTGTTAAAAACTATGACATGGCCGAGTATTTGAAGTTGGAATTTATGAAGGAAACTGGGTTTACCCATATGAGAATTTGTGATGGAGTTGGTTCTTATCTTCAGCTATGCGGACTTCTGGCTAAGCTATCACTTATCAGGGAGACAGCTAAAGCAGCCTGA

Protein sequence

MKKLLNFEEGEIELPLRLCYLINSVLVPRVFHWWNLSHFQFVYDEVMHTVALASLCFKLQFDKLHMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAEYLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKAA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo05338.1	Spo05338.1	mRNA

Homology

[Close]

BLAST of Spo05338.1 vs. NCBI nr
Match: gi|902234229|gb|KNA23374.1| (hypothetical protein SOVF_025430 [Spinacia oleracea])

HSP 1 Score: 562.0 bits (1447), Expect = 7.300e-157
Identity = 279/284 (98.24%), Postives = 282/284 (99.30%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL
Sbjct: 47  NLILAGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 106

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF
Sbjct: 107 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 166

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN
Sbjct: 167 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 226

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE
Sbjct: 227 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 286

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKAA 349
           YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKAA
Sbjct: 287 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKAA 330

[Close]

BLAST of Spo05338.1 vs. NCBI nr
Match: gi|1021038104|gb|KZM95887.1| (hypothetical protein DCAR_019129 [Daucus carota subsp. sativus])

HSP 1 Score: 537.7 bits (1384), Expect = 1.500e-149
Identity = 258/284 (90.85%), Postives = 277/284 (97.54%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL
Sbjct: 51  NLILAGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 110

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           PPGRHKI+ILDEADSMTSGAQQALRRTMEIYSN+TRF LACNTSSKIIEPIQSRCALVRF
Sbjct: 111 PPGRHKIIILDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRF 170

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           SRLSDQEILGRLM+V+ AE+VPY+PEGLEAIIFTADGDMRQALNNLQATFSGF+FVNQEN
Sbjct: 171 SRLSDQEILGRLMVVVAAEKVPYIPEGLEAIIFTADGDMRQALNNLQATFSGFQFVNQEN 230

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCDQPHPLHVK+MIRN+LEGKFDDACSG+K+LYD+GYSPTDIITTLFR++KNYDM E
Sbjct: 231 VFKVCDQPHPLHVKNMIRNILEGKFDDACSGLKSLYDLGYSPTDIITTLFRIIKNYDMPE 290

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKAA 349
           YLKLEFMKETGF HMRICDGVGSYLQLCGLLAK +L+RETAKAA
Sbjct: 291 YLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKFALVRETAKAA 334

[Close]

BLAST of Spo05338.1 vs. NCBI nr
Match: gi|951003244|ref|XP_014507551.1| (PREDICTED: replication factor C subunit 2 [Vigna radiata var. radiata])

HSP 1 Score: 533.9 bits (1374), Expect = 2.100e-148
Identity = 256/283 (90.46%), Postives = 276/283 (97.53%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL
Sbjct: 47  NLILSGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 106

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           PPGRHKIVILDEADSMT+GAQQALRRTMEIYSN+TRF LACNTS+KIIEPIQSRCA+VRF
Sbjct: 107 PPGRHKIVILDEADSMTTGAQQALRRTMEIYSNSTRFALACNTSAKIIEPIQSRCAIVRF 166

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           SRLSDQEILGRLMIV++AE+VPYVPEGLEAIIFTADGDMRQALNNLQAT+SGF+FVNQ N
Sbjct: 167 SRLSDQEILGRLMIVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQAN 226

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCDQPHPLHVK+M+RNV+EG FDDACSG+K LYD+GYSPTDIITTLFR++KNYDMAE
Sbjct: 227 VFKVCDQPHPLHVKNMVRNVIEGNFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAE 286

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKA 348
           YLKLEFMKETGF HMRICDGVGSYLQLCGLLAKLSL+RETAKA
Sbjct: 287 YLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLSLVRETAKA 329

[Close]

BLAST of Spo05338.1 vs. NCBI nr
Match: gi|659096165|ref|XP_008448956.1| (PREDICTED: replication factor C subunit 2 isoform X1 [Cucumis melo])

HSP 1 Score: 532.7 bits (1371), Expect = 4.700e-148
Identity = 255/283 (90.11%), Postives = 277/283 (97.88%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSILALAHELLGPN KEGVLELNASDDRGIDVVRNKIKMFAQKKVTL
Sbjct: 48  NLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 107

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           PPGRHK+VILDEADSMT+GAQQALRRTMEIYSNTTRF LACNTSSKIIEPIQSRCA+VRF
Sbjct: 108 PPGRHKVVILDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRF 167

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           SRL+DQEILGRLM+VI+AE+VPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQ+N
Sbjct: 168 SRLTDQEILGRLMVVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDN 227

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCDQPHPLHVK+++RNVLEGKFDDAC+G+K LYD+GYSPTDIITTLFR++KNYDMAE
Sbjct: 228 VFKVCDQPHPLHVKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAE 287

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKA 348
           YLKLEFMKETGF HMRICDGVGSYLQLCGLLAKLS++RETAKA
Sbjct: 288 YLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLSMVRETAKA 330

[Close]

BLAST of Spo05338.1 vs. NCBI nr
Match: gi|743891719|ref|XP_010911387.1| (PREDICTED: replication factor C subunit 4 [Elaeis guineensis])

HSP 1 Score: 530.8 bits (1366), Expect = 1.800e-147
Identity = 257/283 (90.81%), Postives = 274/283 (96.82%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSILALAHELLGPNC+E VLELNASDDRGIDVVRNKIKMFAQKKVTL
Sbjct: 52  NLILSGPPGTGKTTSILALAHELLGPNCREAVLELNASDDRGIDVVRNKIKMFAQKKVTL 111

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           PPGRHKI+ILDEADSMTSGAQQALRRTMEIYSNTTRF LACN SSKIIEPIQSRCALVRF
Sbjct: 112 PPGRHKIIILDEADSMTSGAQQALRRTMEIYSNTTRFALACNISSKIIEPIQSRCALVRF 171

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           SRLSDQEILGRLM+V+EAE+VPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN
Sbjct: 172 SRLSDQEILGRLMVVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 231

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCDQPHPLHVK+MIRNVLEGKFDDAC+G+K LYD+GYSPTDIITTLFR++KNYDMAE
Sbjct: 232 VFKVCDQPHPLHVKNMIRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAE 291

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKA 348
           YLKLEF+KETGF HMRICDGVGS LQL GLLAKL+L+RETAKA
Sbjct: 292 YLKLEFLKETGFAHMRICDGVGSLLQLSGLLAKLALVRETAKA 334

[Close]

BLAST of Spo05338.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWS5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_025430 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 5.100e-157
Identity = 279/284 (98.24%), Postives = 282/284 (99.30%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL
Sbjct: 47  NLILAGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 106

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF
Sbjct: 107 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 166

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN
Sbjct: 167 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 226

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE
Sbjct: 227 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 286

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKAA 349
           YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKAA
Sbjct: 287 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKAA 330

[Close]

BLAST of Spo05338.1 vs. UniProtKB/TrEMBL
Match: A0A164ZGD1_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_019129 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 1.000e-149
Identity = 258/284 (90.85%), Postives = 277/284 (97.54%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL
Sbjct: 51  NLILAGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 110

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           PPGRHKI+ILDEADSMTSGAQQALRRTMEIYSN+TRF LACNTSSKIIEPIQSRCALVRF
Sbjct: 111 PPGRHKIIILDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRF 170

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           SRLSDQEILGRLM+V+ AE+VPY+PEGLEAIIFTADGDMRQALNNLQATFSGF+FVNQEN
Sbjct: 171 SRLSDQEILGRLMVVVAAEKVPYIPEGLEAIIFTADGDMRQALNNLQATFSGFQFVNQEN 230

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCDQPHPLHVK+MIRN+LEGKFDDACSG+K+LYD+GYSPTDIITTLFR++KNYDM E
Sbjct: 231 VFKVCDQPHPLHVKNMIRNILEGKFDDACSGLKSLYDLGYSPTDIITTLFRIIKNYDMPE 290

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKAA 349
           YLKLEFMKETGF HMRICDGVGSYLQLCGLLAK +L+RETAKAA
Sbjct: 291 YLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKFALVRETAKAA 334

[Close]

BLAST of Spo05338.1 vs. UniProtKB/TrEMBL
Match: A0A067JNM6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20643 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 1.600e-147
Identity = 256/284 (90.14%), Postives = 275/284 (96.83%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSILALAHELLGPN +E VLELNASDDRGIDVVRNKIKMFAQKKVTL
Sbjct: 52  NLILSGPPGTGKTTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTL 111

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           PPGRHK+VILDEADSMTSGAQQALRRTMEIYSN+TRF LACNTSSKIIEPIQSRCALVRF
Sbjct: 112 PPGRHKLVILDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRF 171

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           SRLSDQEILGRLM+V+EAE+VPYVPEGLEAIIFTADGDMRQALNNLQAT SGFRFVNQEN
Sbjct: 172 SRLSDQEILGRLMVVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQEN 231

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCDQPHPLHVK+M+R V+EGKFDDACSG+K LYD+GYSPTDIITTLFR++KNYDMAE
Sbjct: 232 VFKVCDQPHPLHVKNMVRQVIEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAE 291

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKAA 349
           YLKLEFMKETGF HMRICDGVGSYLQLCGLLAKL+L+RETAKA+
Sbjct: 292 YLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLALVRETAKAS 335

[Close]

BLAST of Spo05338.1 vs. UniProtKB/TrEMBL
Match: A0A0A0L763_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G038730 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 2.100e-147
Identity = 254/283 (89.75%), Postives = 276/283 (97.53%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSILALAHELLGPN KEGVLELNASDDRGIDVVRNKIKMFAQKKVTL
Sbjct: 48  NLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 107

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           PPGRHK+VILDEADSMT+GAQQALRRTMEIYSNTTRF LACNTSSKIIEPIQSRCA+VRF
Sbjct: 108 PPGRHKVVILDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRF 167

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           SRL+DQEILGRLM+VI+AE+VPYVPEGLEAIIFTADGDMRQALNNLQAT SGFRFVNQ+N
Sbjct: 168 SRLTDQEILGRLMVVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDN 227

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCDQPHPLHVK+++RNVLEGKFDDAC+G++ LYD+GYSPTDIITTLFR++KNYDMAE
Sbjct: 228 VFKVCDQPHPLHVKNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAE 287

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKA 348
           YLKLEFMKETGF HMRICDGVGSYLQLCGLLAKLS++RETAKA
Sbjct: 288 YLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLSMVRETAKA 330

[Close]

BLAST of Spo05338.1 vs. UniProtKB/TrEMBL
Match: B9RC55_RICCO (Replication factor C / DNA polymerase III gamma-tau subunit, putative OS=Ricinus communis GN=RCOM_1685440 PE=4 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 3.700e-147
Identity = 254/284 (89.44%), Postives = 277/284 (97.54%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSILALAHELLGPN KE VLELNASDDRGIDVVRNKIKMFAQKKVTL
Sbjct: 50  NLILSGPPGTGKTTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTL 109

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           PPGRHK+VILDEADSMTSGAQQALRRTMEIYSN+TRF LACNTSSKIIEPIQSRCALVRF
Sbjct: 110 PPGRHKVVILDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRF 169

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           SRLSDQEILGRL+IV++AE+VPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQEN
Sbjct: 170 SRLSDQEILGRLIIVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQEN 229

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCDQPHPLHVK+M+R+V+EGK+DDACSG+K LYD+GYSPTDIITTLFR++KNYDMAE
Sbjct: 230 VFKVCDQPHPLHVKNMVRHVMEGKYDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAE 289

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKAA 349
           YLKLEFMKETGF HMRICDGVGSYLQLCGLLAKL+L+R+TA+AA
Sbjct: 290 YLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLALVRDTARAA 333

[Close]

BLAST of Spo05338.1 vs. ExPASy Swiss-Prot
Match: RFC2_ARATH (Replication factor C subunit 2 OS=Arabidopsis thaliana GN=RFC2 PE=1 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 2.900e-145
Identity = 249/283 (87.99%), Postives = 270/283 (95.41%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSILALAHELLG N KE VLELNASDDRGIDVVRNKIKMFAQKKVTL
Sbjct: 50  NLILSGPPGTGKTTSILALAHELLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTL 109

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           PPGRHK+VILDEADSMTSGAQQALRRT+EIYSN+TRF LACNTS+KIIEPIQSRCALVRF
Sbjct: 110 PPGRHKVVILDEADSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRF 169

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           SRLSDQ+ILGRL++V+ AE+VPYVPEGLEAIIFTADGDMRQALNNLQATFSGF FVNQEN
Sbjct: 170 SRLSDQQILGRLLVVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQEN 229

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCDQPHPLHVK+++RNVLE KFD AC G+K LYD+GYSPTDIITTLFR++KNYDMAE
Sbjct: 230 VFKVCDQPHPLHVKNIVRNVLESKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAE 289

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKA 348
           YLKLEFMKETGF HMRICDGVGSYLQLCGLLAKLS++RETAKA
Sbjct: 290 YLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLSIVRETAKA 332

[Close]

BLAST of Spo05338.1 vs. ExPASy Swiss-Prot
Match: RFC4_ORYSJ (Replication factor C subunit 4 OS=Oryza sativa subsp. japonica GN=RFC4 PE=2 SV=2)

HSP 1 Score: 510.0 bits (1312), Expect = 2.100e-143
Identity = 247/284 (86.97%), Postives = 270/284 (95.07%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSIL+LAHELLGP+ +E VLELNASDDRG+DVVRNKIKMFAQKKVTL
Sbjct: 52  NLILSGPPGTGKTTSILSLAHELLGPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTL 111

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
            PGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRF LACNTSSKIIEPIQSRCA+VRF
Sbjct: 112 QPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRF 171

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           SRLSDQEILGRLMIV+ AE+VPYVPEGLEAIIFTADGDMRQALNNLQAT SGFRFVNQEN
Sbjct: 172 SRLSDQEILGRLMIVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQEN 231

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCDQPHPLHVK+M++NVL+GKFD+ACS +K LYD+GYSPTDIITTLFRV+KNYDMAE
Sbjct: 232 VFKVCDQPHPLHVKNMVKNVLDGKFDEACSALKQLYDLGYSPTDIITTLFRVIKNYDMAE 291

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKAA 349
           YLKLE +KETGF HMRICDGVGS+LQL GLLAK +L+RETAKA+
Sbjct: 292 YLKLELLKETGFAHMRICDGVGSFLQLSGLLAKFALVRETAKAS 335

[Close]

BLAST of Spo05338.1 vs. ExPASy Swiss-Prot
Match: RFC2_HUMAN (Replication factor C subunit 2 OS=Homo sapiens GN=RFC2 PE=1 SV=3)

HSP 1 Score: 394.4 bits (1012), Expect = 1.300e-108
Identity = 192/274 (70.07%), Postives = 228/274 (83.21%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSIL LA  LLGP  K+ +LELNAS+DRGIDVVRNKIKMFAQ+KVTL
Sbjct: 71  NIIIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTL 130

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           P GRHKI+ILDEADSMT GAQQALRRTMEIYS TTRF LACN S KIIEPIQSRCA++R+
Sbjct: 131 PKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRY 190

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           ++L+D +IL RLM VIE E+VPY  +GLEAIIFTA GDMRQALNNLQ+TFSGF F+N EN
Sbjct: 191 TKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSEN 250

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCD+PHPL VK MI++ +    D+A   + +L+ +GYSP DII  +FRV K + MAE
Sbjct: 251 VFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQMAE 310

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKL 339
           YLKLEF+KE G+THM+I +GV S LQ+ GLLA+L
Sbjct: 311 YLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARL 344

[Close]

BLAST of Spo05338.1 vs. ExPASy Swiss-Prot
Match: RFC2_RAT (Replication factor C subunit 2 OS=Rattus norvegicus GN=Rfc2 PE=2 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.300e-108
Identity = 189/274 (68.98%), Postives = 229/274 (83.58%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSIL LA  LLGP  K+ VLELNAS+DRGIDVVRNKIKMFAQ+KVTL
Sbjct: 66  NIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL 125

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           P GRHKI+ILDEADSMT GAQQALRRTMEIYS TTRF LACN S KIIEPIQSRCA++R+
Sbjct: 126 PKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRY 185

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           ++L+D ++L RLM VIE E+VPY  +GLEAIIFTA GDMRQALNNLQ+TFSGF ++N EN
Sbjct: 186 TKLTDAQVLSRLMNVIEKEKVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGYINSEN 245

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCD+PHPL VK MI++ ++   D+A   + +L+ +GYSP D+I  +FRV K + MAE
Sbjct: 246 VFKVCDEPHPLLVKEMIQHCVDANIDEAYKILAHLWHLGYSPEDVIGNIFRVCKTFPMAE 305

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKL 339
           YLKLEF+KE G+THM++ +GV S LQ+ GLLA+L
Sbjct: 306 YLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARL 339

[Close]

BLAST of Spo05338.1 vs. ExPASy Swiss-Prot
Match: RFC2_MOUSE (Replication factor C subunit 2 OS=Mus musculus GN=Rfc2 PE=1 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.200e-108
Identity = 189/274 (68.98%), Postives = 229/274 (83.58%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSIL LA  LLGP  K+ VLELNAS+DRGIDVVRNKIKMFAQ+KVTL
Sbjct: 66  NIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL 125

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           P GRHKI+ILDEADSMT GAQQALRRTMEIYS TTRF LACN S KIIEPIQSRCA++R+
Sbjct: 126 PKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRY 185

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           ++L+D ++L RLM VIE E+VPY  +GLEAIIFTA GDMRQALNNLQ+TFSGF ++N EN
Sbjct: 186 TKLTDAQVLTRLMNVIEKEKVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGYINSEN 245

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCD+PHPL VK MI++ ++   D+A   + +L+ +GYSP D+I  +FRV K + MAE
Sbjct: 246 VFKVCDEPHPLLVKEMIQHCVDANIDEAYKILAHLWHLGYSPEDVIGNIFRVCKTFPMAE 305

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKL 339
           YLKLEF+KE G+THM++ +GV S LQ+ GLLA+L
Sbjct: 306 YLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARL 339

[Close]

BLAST of Spo05338.1 vs. TAIR (Arabidopsis)
Match: AT1G63160.1 (replication factor C 2)

HSP 1 Score: 516.2 bits (1328), Expect = 1.600e-146
Identity = 249/283 (87.99%), Postives = 270/283 (95.41%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTL 124
           ++ + GPPGTGKTTSILALAHELLG N KE VLELNASDDRGIDVVRNKIKMFAQKKVTL
Sbjct: 50  NLILSGPPGTGKTTSILALAHELLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTL 109

Query: 125 PPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVRF 184
           PPGRHK+VILDEADSMTSGAQQALRRT+EIYSN+TRF LACNTS+KIIEPIQSRCALVRF
Sbjct: 110 PPGRHKVVILDEADSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRF 169

Query: 185 SRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQEN 244
           SRLSDQ+ILGRL++V+ AE+VPYVPEGLEAIIFTADGDMRQALNNLQATFSGF FVNQEN
Sbjct: 170 SRLSDQQILGRLLVVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQEN 229

Query: 245 VFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFRVVKNYDMAE 304
           VFKVCDQPHPLHVK+++RNVLE KFD AC G+K LYD+GYSPTDIITTLFR++KNYDMAE
Sbjct: 230 VFKVCDQPHPLHVKNIVRNVLESKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAE 289

Query: 305 YLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIRETAKA 348
           YLKLEFMKETGF HMRICDGVGSYLQLCGLLAKLS++RETAKA
Sbjct: 290 YLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLSIVRETAKA 332

[Close]

BLAST of Spo05338.1 vs. TAIR (Arabidopsis)
Match: AT1G21690.3 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 175.3 bits (443), Expect = 6.800e-44
Identity = 106/246 (43.09%), Postives = 136/246 (55.28%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNC-KEGVLELNASDDRGIDVVRNKIKMFA----- 124
           HM   GPPGTGKTT+ LA+AH+L GP   K  VLELNASDDRGI+VVR KIK FA     
Sbjct: 44  HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVG 103

Query: 125 --QKKVTLPPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQ 184
              ++   P    KI+ILDEADSMT  AQ ALRRTME YS  TRF   CN  S+IIEP+ 
Sbjct: 104 SNHRQSGYPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLA 163

Query: 185 SRCALVRFSRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSG 244
           SRCA  RF  LS++ +  R++ +   E +    E L  +   + GD+R+A+  LQ+    
Sbjct: 164 SRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRL 223

Query: 245 F-RFVNQENVFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYDMGYSPTDIITTLFR 302
           F   +   ++  V        V  +      G FD A   + N+   GY  + II  LF 
Sbjct: 224 FGSTITSTDLLNVSGVVPLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFD 283

[Close]

BLAST of Spo05338.1 vs. TAIR (Arabidopsis)
Match: AT1G77470.1 (replication factor C subunit 3)

HSP 1 Score: 172.9 bits (437), Expect = 3.400e-43
Identity = 104/288 (36.11%), Postives = 161/288 (55.90%), Query Frame = 1


		  
Query: 65  HMYVQGPPGTGKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQ-KKVT 124
           H+ + GPPGTGKT++ILA+A +L GP  +  +LELNASDDRGIDVVR +I+ FA  +  +
Sbjct: 74  HLLLYGPPGTGKTSTILAVARKLYGPKYRNMILELNASDDRGIDVVRQQIQDFASTQSFS 133

Query: 125 LPPGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFGLACNTSSKIIEPIQSRCALVR 184
           L     K+V+LDEAD+MT  AQ ALRR +E Y+ +TRF L  N  +KII  +QSRC   R
Sbjct: 134 LGKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNHVNKIIPALQSRCTRFR 193

Query: 185 FSRLSDQEILGRLMIVIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSG------- 244
           F+ L    +  RL  VIEAE++     GL A++  ++GDMR+ALN LQ+T          
Sbjct: 194 FAPLDGVHMSQRLKHVIEAERLVVSDCGLAALVRLSNGDMRKALNILQSTHMASKEITEE 253

Query: 245 -FRFVNQENVFKVCDQPHPLHVKSMIRNVLEGKFDDACSGMKNLYD-MGYSPTDIITTLF 304
             + + +E+V+     P P  ++ +   +L   FD+    +  +    G +  DI+  + 
Sbjct: 254 ESKQITEEDVYLCTGNPLPKDIEQISHWLLNKPFDECYKDVSEIKTRKGLAIVDIVKEIT 313

Query: 305 RVVKNYDMAEYLKLEFMKETGFTHMRICDGVGSYLQLCGLLAKLSLIR 343
             +    M   ++++ + +      R+  G    LQL  +++  +  R
Sbjct: 314 LFIFKIKMPSAVRVQLINDLADIEYRLSFGCNDKLQLGAIISTFTHAR 361

[Close]

BLAST of Spo05338.1 vs. TAIR (Arabidopsis)
Match: AT5G27740.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 75.1 bits (183), Expect = 9.500e-14
Identity = 51/140 (36.43%), Postives = 84/140 (60.00%), Query Frame = 1


		  
Query: 97  LELNASDDRGID--VVRNKIKMFAQKKVTLPPGR--HKIVILDEADSMTSGAQQALRRTM 156
           +EL  SD    D  +V+  IK  A+ +     G+  +K+++L+E D ++  AQ +LRRTM
Sbjct: 95  VELTPSDAGFQDRYIVQEIIKEMAKNRPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTM 154

Query: 157 EIYSNTTRFGLACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVIEAEQVPYVPEGL 216
           E YS++ R  L CN+SSK+ E I+SRC  VR +  S +EI+  L  V + E +  +P+G 
Sbjct: 155 EKYSSSCRLILCCNSSSKVTEAIKSRCLNVRINAPSQEEIVKVLEFVAKKESL-QLPQGF 214

Query: 217 EA-IIFTADGDMRQALNNLQ 232
            A I   ++  +R+A+ +L+
Sbjct: 215 AARIAEKSNRSLRRAILSLE 233

The following BLAST results are available for this feature:

BLAST of Spo05338.1 vs. NCBI nr
BLAST of Spo05338.1 vs. UniProtKB/TrEMBL
BLAST of Spo05338.1 vs. ExPASy Swiss-Prot
BLAST of Spo05338.1 vs. TAIR (Arabidopsis)

BLAST of Spo05338.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902234229\|gb\|KNA23374.1\|	7.3e-157	98.2	hypothetical protein SOVF_0254...	[more]
gi\|1021038104\|gb\|KZM95887.1\|	1.5e-149	90.8	hypothetical protein DCAR_0191...	[more]
gi\|951003244\|ref\|XP_014507551.1\|	2.1e-148	90.4	PREDICTED: replication factor ...	[more]
gi\|659096165\|ref\|XP_008448956.1\|	4.7e-148	90.1	PREDICTED: replication factor ...	[more]
gi\|743891719\|ref\|XP_010911387.1\|	1.8e-147	90.8	PREDICTED: replication factor ...	[more]

BLAST of Spo05338.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RWS5_SPIOL	5.1e-157	98.2	Uncharacterized protein OS=Spi...	[more]
A0A164ZGD1_DAUCA	1.0e-149	90.8	Uncharacterized protein OS=Dau...	[more]
A0A067JNM6_JATCU	1.6e-147	90.1	Uncharacterized protein OS=Jat...	[more]
A0A0A0L763_CUCSA	2.1e-147	89.7	Uncharacterized protein OS=Cuc...	[more]
B9RC55_RICCO	3.7e-147	89.4	Replication factor C / DNA pol...	[more]

BLAST of Spo05338.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RFC2_ARATH	2.9e-145	87.9	Replication factor C subunit 2...	[more]
RFC4_ORYSJ	2.1e-143	86.9	Replication factor C subunit 4...	[more]
RFC2_HUMAN	1.3e-108	70.0	Replication factor C subunit 2...	[more]
RFC2_RAT	1.3e-108	68.9	Replication factor C subunit 2...	[more]
RFC2_MOUSE	2.2e-108	68.9	Replication factor C subunit 2...	[more]

BLAST of Spo05338.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G63160.1	1.6e-146	87.9	replication factor C 2	[more]
AT1G21690.3	6.8e-44	43.0	ATPase family associated with ...	[more]
AT1G77470.1	3.4e-43	36.1	replication factor C subunit 3	[more]
AT5G27740.1	9.5e-14	36.4	ATPase family associated with ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 62..188 score: 3.0
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 66..182 score: 2.9
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	unknown	SSF48019	post-AAA+ oligomerization domain-like	coord: 251..342 score: 1.36
IPR013748	Replication factor C, C-terminal	PFAM	PF08542	Rep_fac_C	coord: 252..337 score: 1.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 64..187 score: 6.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 66..234 score: 2.31
None	No IPR available	GENE3D	1.10.8.60		coord: 188..252 score: 1.3
None	No IPR available	GENE3D	1.20.272.10		coord: 253..343 score: 2.9
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 64..343 score: 9.2E
None	No IPR available	PANTHER	PTHR11669:SF5	REPLICATION FACTOR C SUBUNIT 2	coord: 64..343 score: 9.2E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006260	DNA replication
cellular_component	GO:0042575	DNA polymerase complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0017111	nucleoside-triphosphatase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo13281	0.67	Barchart \| Table
Spo15087	0.65	Barchart \| Table