Spo05342 (gene)

Overview
NameSpo05342
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionVesicle-associated protein 4-2 (Plant VAP homolog 4-2) (AtPVA42) (VAMP-associated protein 4-2)
LocationSuper_scaffold_208 : 381777 .. 391968 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACAACAACATATCGAAGCCGGATACAAAGCATACCACGCCTATAAGCGGCCGATGAGAAAGGTGGTGTGTCCGGTTGAAAACCAGAACCTCAAGTCTCCAGCCACGGTTATCGAAAAGAATTCTCCCGTTAATTACCTATTTATCTTGTCATCTGCATATTATTAGATAACATTTGGTTAAGTCTTTAAGACTATTAGACAATTGTATATCACCTATGTAATGACTTATGACTTATTCTGTATGAGTTATTTATTTATAATATTATTTTTATCTTGTAATTATTTTGATTTTAAATTTATACTAATGTATAATATAATTGTCAATATGCTTGATAGCCTCAACTTTTGACACGCCTTTGTAAAACTAAATCTAAGTATGATCTATTTTGTAGTGATTATAATTGCCGCTATAGACTGTCAATTTGGATTGTTGTCTTAGAAAATGTATCAATTACGAAATGAATAGTATCACTTAATTTGCAACAATAAGTAACCTATAGTAGTGATTATACGATAGGTATCTAATAGCATCAATTGCATTCGCTACTATAACTACGTACCAACAACATTGAATCGTTTGCCGCTAAAATTAATGTATTTGGTATGTGAAATTAGGGAATTATAGCGATTATAATCACTAGAATAATCGATACTATTATGCATAGTATTTTGTATCGATTGTTTTGGTATACCCCATTGAATGTAATAATCGCTACTATAGGCTACAACAACGGTGGCTACCGCCTCGAATAGCTAATTGTTGGGGAATATTTTCGTAAAGAATATATTCGTTACTAAAGGCCAAAATAATCACCATGAAAGCCCTTCTTTCTTGTAGTTGATGTAGAAATCTTTTTCATACATACTTATTGGAATTTGTAGGGGGTTTTTTTGGTTTTTTCCCCTACGGGGGCGGTTGTTTTAGAAACCTTCGTATTTTTGTACTTTGTAGGAGTCGCCACCAAACATTGTTTAGGGTCTTGTTTGGAAAGACCGTAAATGACTCTATAAGGATAAGACTTGAATCTTCGAAACAGATGGGTGAGATCCAGGCAAGGGAACGAGATGCTTATTCCGCGAGCTTTAGAAATAATTCAAGTGTGTGACACAATATTTTCAAAAATACCCTAGTTTAGACTATGTGGGTTTGAATTTAGGACAAATTGAATTTCTACTTTGCATGGAGATTACTTTGCTTTAAAGTTAATTTAAGGGAACCTAAGATCAGTTTGTCCAAGAAATTATCTTTGTTAAGCGTGATGTAACCTTGTATTTTGTTGTATTTAGCATGTGCGGTGATGAAAGCAATAAAGCAAATAAAGCAACATCACAATAGTAAATAAGGGAGGAATTAGTAAATACAAGACCCCCTAGAGATGGACTAGGGAGTAGGTCCACATTGCCTAGAAGGACTAGGCAAGTAAAGTTGCATAATTGAAAGTGCGGAATTGAAATGCGTTATTGAAAGTGCGGAATTGAAAATGCGGAATTGAAAGTGCATAATTGAAAGGTGCGTAATTGAAATTGCAATATTAAAATTTGTACTTGGGCACATGAGATCCGAACGCCAAACGGCTACTTAAAAATAAGTGCGCTCGACACGAATTGAAAGCCAAAAATCTCAACTTGGGAGAAGATGCTCATCCCAAAGTATCCTAGATTTTGAATATATAACTTGAACTTGAAGACATGAAACTTGAAATATTGAACTTGAAATACTTGAACTTGAACTTGAAATATTGAACTTGAACTTGAAATATTGAAGTTAAGAGACTTGAATATCAAAGATCGGGCCTTTTAATGTTGAAAAGGTTAGATATTTGATATGCTCGTGCTTTGAAAGGATCCTAGTTTAGGGAAGTAGTCATGAACAACCCTAAACATTGTTGGATCTTGAAATTTGAAAACTTGAACTTGTATATTGAAAAATGGAGTCTTGAATCTCAAAGAATAAACCTTTAAAAGTTAGAAAGGCATCATCTTTGATTACTTCATACTTGATAATGATTCTAGTTCAAAGAAGTGATTACAAACAACTTTGAACATCCTTGAATCTTGAAATTTTCCATTTTTGTATTTTGAAAAGATGTATGATTGTTGCAAGTGACAGTTTTAAGAGTAAAAATGCCAACTTACTAATCATTTTGAAATAGAAAATCAAGAAATCATTGAATATATTAGGGTTGGGATTCGGAATTATCTACTTAGGTTTAGGCAAGCTTTCCGATTAGAACTCCCAATTGCTTAAAGCTTGAAGATTGTATGCTATTTTGGAGGATTTTGTATTGATTTTTGTATTCAATATTGAGGTGCAATTTTTGTATTACGACGTTATGTGTCCCTGTTCTCCTCCTCTAATGCATGGAATTAGGGGGTATTTATAGGGGGAATGGCTGCTAAACGCCAGCACAGCACGCTGAAGCAGCACCCAGCGCTGATGACGTGGCGTGAATGCCGCCAAAACAAGGACGCGGGCTCCGTCCTTGATTTATCTTGTATTGATGTACCTTCGTACGAATAGTATGATGTTTGGCACGTAGTGTTTTCTTGGAGGTTAAGAGTTTATTTTGCGTCTAAAAACAAGTCGTTCTGGGTTTTGAATTTCGGTTTTACGGGACGAGGCCCGGCTTGCTCGGTTTTGTGGGTCGGCGCCCGAATTTGACTTGCCTTATATGATTTTGAGTGGAAAAGGCTTAGTGAAACCAATGGAATGGTCTACTAGATGAGATTGTACTTGGATTTTGAAAATTGTATTTTGTACCGAGTTCCGAAAGGGGAACGACCTAGGGGATTGGATTTTGGCTCTTGGATTTTGGACATGCTTTTAGCAATTGGAATTTCCACATGCAGTTACTCCAACTACCTAACAAGGATAATGGTATCGTCATCATCCTAATGGGAAGACACAAATTAGGTGCCCCCACTTTGACTGAGCATTCGATCAGGAAAGCGCTAGTCAAAGTACTCGACTTGGGACGGAGAATGGTCAAGACGTTCTACGATTAAGACCATTCTTTGTACACCGGTCCTGCACAAAACAGGCGTTAGAAAAAAGGATATAGTCTACCTCCGTGCGGTTGTGATGACTCCAATTTGTACTTGTACTGTTCTTCCGCCTTTGGTTCGGGACGGAGCATGGCATCGGAAATTTGAATCTTGAGTTTTTGAATCTTGAATTTTTGAATCTTGAATTTTTGAATCATGAATTTTTGAATTTTGAACACCTGGAGTTGATCCGTTGGGGATGTGCTTGACTGGGGATAAGAGCTTTTTATTGGCCCTTAAGATTTTGAAATTTCGGCTGACTTTCCTGGAGCTTAGGTCCGTTGCGAGTCGAACGCCTGAGTCATTGTATTTTTTGGAATTTGTATTCTTGAAATGCTCATCTGTTTGTGCTTGGAGATACGGGTGTATATCCGTATTTTCGAAGGGGATTTCCTGATTCGACGTTTGATGCTTGGTGCGGAAGATCGTAGCAGCAAAGGACGTGCAATCAGCATGGGAGACCGCGCGCTGCAGATTCCTGCGCATGCAGCAGGCAGCGCCCAGCGCGGAGCTCGGCGTCAGGCGCGGGGCTGAGCTATAAAAGCTCCCCTTGCCGTGCCATTTTTGAGGCACACTCTCTTGAATTCTTTTCTCTTCTCTCTCAAAGGTCGATTAGCCTCTCCCCTTGGGCTGAGCTATAATTTCTTGTATTTGCTTATGAAATAATCTCTAGGATTGCATGTAGTTTTGAACTTTCTCGTACTTTGGAATGATGCTTGTATGCTTTAAGCTTCTTGAATTTTGTTGAGAATTGTTTGATAGCCACTTGAACTGGAACTGTTGGAACTTGTAGATTTGAATTTTGAAAATTTTCTTGAATCTTGTACCTGGTATTTGTAGATAGTGGTCTCACTGGTGACCTCGCGGGGTCTCAGGAGAGAATAGGCTAAGATGCCTAGATGTTGTTTGTAGAGTTTTGGAATGCTGGCTTCGGCATGGGTAGCCTAGGAGTTGGTGTTGAACTTGTATCCCTGCTTCGGCGTGGATAGCCTAGGCGTTGATGTAGAACTTTCATACCTGCTTCGGCGTGGATAGCCTAGTCGTTGGTGTAGAACTTGTATTTTGAACTAGAGGTCCCTGGCTGAATTTGTACTGCCACTGGGGGTTTTTGATTTTTTGACTTCGTACAGGCTAGTATAGGATAGCCTCTGAACTTTGATTTTTATACGGGCTAGTATAGGATAGCCCCCAGTTTAGAATTTTGACACTTTGTAGTCTGCTTGATTTAGTATGCCTCGTCATACTCGGAGGAAGCTCGCCGAATCTTCGGTGGTTCGGGCTGCTGAGGAGGACGCTTCGGACGATGAAGGGCCTACGGTAAACGCGCCGGATGGGGGTATGGTTCCCCGGAGAGCACCCACTTTTTTCGGTACTGGTTGGAGTTCTTCCGATCTGGTGTTTCGACCGGAGATTCACTTGTCTCAGCGGCCTCGCGCTGGCTTGGTAAGTCTTGTACTATGCTTTGAATTTGTATCTTGTACTTGTATAGGTTTTGAGCTAATTCGTTCATAGGTAGGCCGATGGAGAGCTGTTTTGCACCTTCTGGTCCTTGGCGGAGCTTCAGAAGGCTTTTAAAGCCATTAGTGCTGACGAGGAGGGTATAGAGATCTGGTTTCAGACGGGCCTGGTCGATTTCTAGCGTGCCATGGGAGATACTCCGAGGAGAATGGGGATCAAACACCGGCTACAGGCTTTGCTGGAGCGGTGGTGGGATACCACCAACACTTTTCATATGGCATTGGGGGAGATCACCATTACCCCTTTTGAGTTTGCCATGATTACGGGTCTTCCTTTTTCTGAGAGGAACGTGACCTTCGATTCGGAGCTGACGTGGCGCTCGGCCACTGCCAGGGACTTGCTCGGCCCTATTGTTGACTTGTCGGGTGATGACACCCACGCTTCTGTGACGGTGATCATGGACGCTATCCGTAGCGTGGGCGTGTCCGCAGAGCAGAGGGTTAGGCTCTTCCGCTTAGCTTTGATGAGTATGGTGGTGGCCCCGAGCAGGAACAGTCGGGTGCACATTAGCTTCTTGTCATCTTTGCGGGACTTGAGGGCTGTCTCGAGCTACAGCTGGGGTGGTCTGGCATATAGCCATCTCTTGTACGACATGAAGTGGGCCTCCCGGACTACGCCGGAGAGTGAGTCGAGCATTGCTGCTCTGTGGAGTGTGCTGGAAGTATTTAAGACTCCTTGTACTTTGTGCCTTGTACTTGTATGCTTGTATCTTGACTGATGTTTTGCTTGCTTTCTTGAAATATATGGATGTACGAGCACTTTCCGACTTTGGCGTCGGATCATACTGGAGATGCGGCTTACCCGTATGCTGCCTCTTGGATAGGAGCGGTGCGAAGGAGGGTGCCTCTGGCGGCCTCCCGCAAAGCTTTGAGAGTTCTACCTGCTGATGAGGTAATATTTTCGTACTGTTTTGCTCTTTTTTATTTGTACTTGAATAGTTGCCTGAGTTGTCTGCTTTGTAGGAGGTGTGGCGTCCTTTTGCTGACGCGCCTGTACCTGCCTCGGCTGCTCGTGCCCATTTCTTGTCTGGACGGCGGGTTTTGCTCCCGGGGGTGTATCGCCACATGTGGTATCTGGGGGAGCGAGTGTCCCTTCAGCACAGTTCAGGGGATAGGCTTGTCCCCAAGGACCCACCGGAGTCCATGTTGGCACCGGATGAAGAGCTTGCCCGTCTTTAAGTGAATGCTAGGGGCGATGCTGTTTGCCGCTCTTGGAGGGACTTTGTACAAAGGAAGGGAAGCTATGACGACTTCTTGAGGAGGCTGGCTCCACCAGTACGCTTCGTACTGCCGGTGAGCTCTTGAACTTTGTACCCTGTATTCTTGTATTCTTGTATCATAGTATTCTTGTATTCTTGTATTCTTGTATCATTGTATGAATGTTTGTAGGAGGATGAGGTTGATCCTGAGGACATTCCCTATGCTGATAGGGTCATCCGCTATGAGAACTCAAACGGGGAACAGGTGGAGGTGACCATCCCTGTAGCTTCTCCTCCGCACCGGAGATCGTATGATGTTGTACCCGAGCATTATGCAGCTGTAAGTACTGTTGCATTTTCTTGAAACTGATTGTAATCTTGTATCTGGGAATTGATCTTGAATTTTGTATGCAGGCGCCTCGGGTGAGAGTGCGTCGCTGGATGCTTTTGATTGATTCTCTGAAGAGGCATTGTGCCAAGCTGACCCTGAAGCTTTCTGGCCGGGACAGAGAGGTGCTTTTCTTGATTTTGAAATTTGTATTCTGGAAGCCCGAACTTGGATGTCTGATTCTTGAAATATGGCACAGCGCCAGTTCATGGCAATGCAACAGCCTTATCAGTACCCTTCCTCTCAGCAGGGACCCTATCGTTCTCCCGGTACTCTTCGTATCTCGGAGCAGGATCCTGGTACCCCTGGGGCAGAGCTGGATCGAGATTTGGAGCGCCTTAGGAGGCGGAACAGGAACAAGGAGCCCATGGTTGACATTATAGCTGATGATGACTCGGATTGACCCTTCATGGTAGCGAGTTCCAGCTTGCCTGGGTTAAATTTTTATAGGTTGGGTTGTATTTGTATGGATTTGAAATTTTGAATCTTGTATGACTCGAATTGGATTTTTTGATGGTTTTGTACTTGAAACTTGCAAGGTTTGGAATCTTTGAATCGTGTATGGTTGAAAATTTAAATTTTGTATGCGTTGTGTGTGCTTTGAAATTTGTAGCTATATGCATGCATGAAAAATTTGCAAAAAATTTGAAAAATAATTTGCCCATTTTTTCGGGTGTATATACCCACTATAAGCCCCCACTTTGACTGAGGTTCTTTCGTAAGAAAAAGCGCAAGTCAAAGTATATTGAACTTTTGCTTATGCATATGCAGACTCGGCTTAGGACACCGATCTAGGACTAGAATGCTTGAATTTTGAATAAATTGAACCAAAATCTGCTCGAAGCGCTGACTCGGACTGCTTGAATTTGCGCGGCTTGCGGCTTTGGAATCTAGAATAATGGAGGTTTTACTCTGCTGTCTGAAGCACTAAAGAGTGCGTACAAGGAAAAACAAGACGGTGGCCTCGTCCTTCGTTGCAGGCCCTTGCGCCTGGCGTAGGACATGGCGCCTAGCGCCAGCGTGCTGTCGTGCAAGCCGACTCTTGTATAAGTAGGGAGTATTTTGGATCATTCTTGCATCAATCCTTCCCTGCTATTCCTTGCATACTACTTCCTCACGATAAAGAAGAGAGAATATGGCTGTGTCCTTTGAAAATGCCTTGAACTCTTGGCTTGGTTCGCTAGGCAAATTGGAGAAAAGGGAGCTCGATGGCATGCATCTTGGGGTGCTCGCCTCCTTCCGGTTTGTAAAGCTGGATGTGCACTTCAATCTTGCTGCTTTGGAGGCTTGGGGTCTGAATCATCATGTCTTCCGCTTTGGGAATAATGGGGTATGTCCCCTCCCTGAAGAGTTTAGCACCATATTGGGGTGGCCCATTATGCCGGAGCCATGCATGCCTAGTGTTGAAGAACACTTTTTCTTGGGCTTTGAAAGATATTTGGGCTTGAAGCCCCCACTTTTCAGTGTTGTTGTATACGGCACAGGGGTGGACTTGTCCCTCCTTGTCACCTACTTTGCTGGGCTTGATGTTCATAAGGCTATCCGTTTGAGGGCCTTGAGTTTTTGTATCTTTGCTCGCTTCCACTTTTCGAAGCAGGGGTTTGGCAATCGCGATGCCTCCCTAATAGATATTGTAGAGCAGTTTGCTAGTGGCCGAGACCCAATGCCGCTCGTGGTTGGCGAAACATTGATGGGCCTTGACATGCTGAAGTCGGACCCCTCTTCTTTGCCGTCGGGGAGTCCGGTATTACTCCAAGTAAGGATCTGGAGCCTTCTTGTACATTGAATTTGTACTTGTATTTGAATTTTGAATGTTGAATTTTGAAATGCATTTCTTGTATACTCCCCAAGATTTGGCTTATGAAGGGGCTCATGCTGGTGGCACCACAGGAGAACATGGAGAGTTATAATAGAAAAGGGTTCACCGTGCGGCCCATGATGTGTGGTCGGCTTTCATTGGACGAGTGGCGAAGCGCACTCTCTGGGATTGAATCTTGCATAAGGTGGGTAGTTCCTTGGTGGGGAATTGCTGCCATGAGACATGCCCCTGATTCTACTGCTTTGAGGGTGCCAAGCCTCACAATGCTGGTCTTCTACTCGCCTGCCCGAGTGATGAGACAGTATGGCTTGAAACAGGAGATCTCAGACTATACTGAAGAGAACACGAAACCTTTTGCGCTGAATGCGAGTCGACTTGAAGTTTGGAGGTGGTATTGGATCGCCAAACCATTCTTGAATATTCAGTTCCCACCTGAGCCAGTTACTCTGTCTGCGGGGCACATTGTTTGGATGAGAGGCCTAAGCCAAAGGGACATTTCTCTCTCCGGACCAGCTAGAGTCCGAGGTTCTAGAGCTAGACGTCCCGCATCAACTGACTATGAGGAAGGTGACGGGAGGGTGGCCCGTCCGGTGCATGACCAATCTGAGTCCAAAGGAGGTTCGTCATCCTCCCGTTTTGGAAGGCTCGCAAGTTCCTTCTCCCGCCGCTTCGGCAAGGGGAAGATTAATGATTGATTGCGGGAGGAGCCGGGGGATAGTACTCAAGGTGCAAGGACTCAAGAGCATAGTCGCCCGACCCAAGATCTTTGTAGGCTGAATGTGTTTGAATTGTACTAGAAGGAATTGTGTTTGAAGAATGTGTTTGGAAGGTGTGTTTAAAAAATGTGTTTAGGAAGTGAAAAGGCTTTTGAACTTTGCTTCACTTGATCCTGACCTTCACTACAACAAAATGGGTAATTAACAGCACCTAATTGACAGCGATTATGAAAAATCGTTGTCGTTATAATCAAATAATAGCGCTTTATTTTTCTCCGCTGATACAAATTGCTATTTAATAGCACTTTCATTCTCAATTACTACAATACAACGTTTATTATTAACGTGCTGTTGAAACATACTCCGTAACTCTTTACCCACAGGAAAAAAATAAACACACAGACTCCAAATAAAATCCCATTTACCACCCACGATCCTCTATATGCGGTTCATTTTCATCTCCCCAAAAATTTCTCCCCAAAGCTAAACTAATATTTTCATTCCAATTCCCCATTCCAAAATTTACAAGTTCTCTTCAATCCGAAATCGTCGATCGAGTTCCCTTCGAAATTGGTCGAGTTAATTTGTGATTTTGCCAGCGTATTCTCCGATATACCTATACAACGACGACGAAATTCAGTTGTGGAGGATTTGGATTACTTCTTCTTCTTATTAAGTTGCTCTGAAATTTGTAGTGCATTATTAATTGTGATTTGTGAGTATGGATTTCTTTTTAGTTATCAATTTAATTAAGTTTTATAGGTTTATGAATTGGGAATTTGCGATTTTGCATATGTGAATTGCAGTTAAATTGCGATATTTTTGGTTTACTTCTATTGAATTTGGTTTACCTTAAAACTACTTTTTCTTATTAGGATTCATAGAATTGTTTAATGATAACAGGATTCTGATTCCCCTTGACATTGTCAGGTGGCGGCGGTGGAGTTAATGCTGTTTCGAAGCCGAAACCCACGGTGTCTTCTGTGGCGCGTTCTTTACTTCCGGCAAAACGCCATCTTCGGCTTGATCTTGCGAACAATTTGTACTTTCCTTGTAAGTTTCTTTCTCCTTCCTGCTGATTTCAAGTTTTATTTGAATTTATTTTTGTTGATTTGGAATTTTAATTTGTGTAAGGTATAAGTTAGCTTATGAATGTTGAATTAAGTTGATATTTTCAAATTTTGTTTGGCATATATAAGGATGAATGTTGTTAATTTTGGTGTTGTGTGTAAAACTAATTGAGTAAAGGAATAATTGAACTTGAAAGGATATTTTGTTCTGTTTGAATGATGCATTAGCTTGGATTGGTGTTTAGGAAATATCCAGATACAATTCGAGGTTTTGATTTCATGGTTGCTTAAGTTAATGACTTAAGGTGTATTGACTATTGAGGTTGAGAACGAAATGACTTATGTTAATTTTTTTTTTTTTTTGTTAATGGATTTAAAAGCTTGCATTAGAATATCTATTTTTTAATATTAAATTTCAGGTGTCGTTGGTTGA

mRNA sequence

ATGACACAACAACATATCGAAGCCGGATACAAAGCATACCACGCCTATAAGCGGCCGATGAGAAAGGTGGTGTGTCCGGTTGAAAACCAGAACCTCAAGTCTCCAGCCACGGTTTATGAATTGGGAATTTGCGATTTTGCATATGTGAATTGCAGTGGCGGCGGTGGAGTTAATGCTGTTTCGAAGCCGAAACCCACGGTGTCTTCTGTGGCGCGTTCTTTACTTCCGGCAAAACGCCATCTTCGGCTTGATCTTGCGAACAATTTGTACTTTCCTTGTGTCGTTGGTTGA

Coding sequence (CDS)

ATGACACAACAACATATCGAAGCCGGATACAAAGCATACCACGCCTATAAGCGGCCGATGAGAAAGGTGGTGTGTCCGGTTGAAAACCAGAACCTCAAGTCTCCAGCCACGGTTTATGAATTGGGAATTTGCGATTTTGCATATGTGAATTGCAGTGGCGGCGGTGGAGTTAATGCTGTTTCGAAGCCGAAACCCACGGTGTCTTCTGTGGCGCGTTCTTTACTTCCGGCAAAACGCCATCTTCGGCTTGATCTTGCGAACAATTTGTACTTTCCTTGTGTCGTTGGTTGA

Protein sequence

MTQQHIEAGYKAYHAYKRPMRKVVCPVENQNLKSPATVYELGICDFAYVNCSGGGGVNAVSKPKPTVSSVARSLLPAKRHLRLDLANNLYFPCVVG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo05342.1Spo05342.1mRNA


Homology
[Close]
BLAST of Spo05342.1 vs. NCBI nr
Match: gi|902220806|gb|KNA18699.1| (hypothetical protein SOVF_067660 [Spinacia oleracea])

HSP 1 Score: 74.3 bits (181), Expect = 1.300e-10
Identity = 40/64 (62.50%), Postives = 44/64 (68.75%), Query Frame = 1 

		  

Query: 29  NQNLKSPATVYELGICDFAYVNCSGGGGVNAVSKPKPTVSSVARSLLPAKRHLRLDLANN 88
           +QN +S      +GI         GGGG+N V KPKPTVSSVARSLLPAKR LRLD ANN
Sbjct: 49  SQNYRSNYDANHMGIG-------GGGGGINGVLKPKPTVSSVARSLLPAKRRLRLDPANN 105

Query: 89  LYFP 93
           LYFP
Sbjct: 109 LYFP 105
[Close]
BLAST of Spo05342.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RIE2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_067660 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 8.900e-11
Identity = 40/64 (62.50%), Postives = 44/64 (68.75%), Query Frame = 1 

		  

Query: 29  NQNLKSPATVYELGICDFAYVNCSGGGGVNAVSKPKPTVSSVARSLLPAKRHLRLDLANN 88
           +QN +S      +GI         GGGG+N V KPKPTVSSVARSLLPAKR LRLD ANN
Sbjct: 49  SQNYRSNYDANHMGIG-------GGGGGINGVLKPKPTVSSVARSLLPAKRRLRLDPANN 105

Query: 89  LYFP 93
           LYFP
Sbjct: 109 LYFP 105
[Close]
BLAST of Spo05342.1 vs. ExPASy Swiss-Prot
Match: VAP41_ARATH (Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.500e-6
Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 1 

		  

Query: 57 VNAVSKPKPTVSSVARSLLPAKRHLRLDLANNLYFP 93
          ++AVSKP  T+SSVARSLLPA+R LRLD ++ LYFP
Sbjct: 53 ISAVSKPPLTMSSVARSLLPARRRLRLDPSSYLYFP 88
[Close]
BLAST of Spo05342.1 vs. TAIR (Arabidopsis)
Match: AT5G54110.1 (membrane-associated mannitol-induced)

HSP 1 Score: 51.6 bits (122), Expect = 3.100e-7
Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 1 

		  

Query: 57 VNAVSKPKPTVSSVARSLLPAKRHLRLDLANNLYFP 93
          ++AVSKP  T+SSVARSLLPA+R LRLD ++ LYFP
Sbjct: 53 ISAVSKPPLTMSSVARSLLPARRRLRLDPSSYLYFP 88
[Close]
BLAST of Spo05342.1 vs. TAIR (Arabidopsis)
Match: AT4G21450.3 (PapD-like superfamily protein)

HSP 1 Score: 47.4 bits (111), Expect = 5.900e-6
Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 1 

		  

Query: 54  GGGVNAVSKPKPTVSSVARSLLPAKRHLRLDLANNLYFPCVV 96
           G G N    P P+VSSVA+S LP KR L+LD +  LYFP  V
Sbjct: 81  GSGQNQHPTPSPSVSSVAKSFLPTKRRLKLDPSEKLYFPWFV 122
The following BLAST results are available for this feature:
BLAST of Spo05342.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 1
Match NameE-valueIdentityDescription
gi|902220806|gb|KNA18699.1|1.3e-1062.5hypothetical protein SOVF_0676... [more]
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BLAST of Spo05342.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0K9RIE2_SPIOL8.9e-1162.5Uncharacterized protein OS=Spi... [more]
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BLAST of Spo05342.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
VAP41_ARATH5.5e-669.4Vesicle-associated protein 4-1... [more]
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BLAST of Spo05342.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G54110.13.1e-769.4membrane-associated mannitol-i... [more]
AT4G21450.35.9e-654.7PapD-like superfamily protein[more]
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RNA-Seq Expression