Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTAACTAAAATTACCTTATCTGAATTTAATTTTGCTGAAAAAATTTAACTTATTTGAATTTATTTTGCTGAAAAAACTTATTTGTGTGTTAAGTTATACGCATAATGAACGTTGCTTGAGCATTCACCACAGGATAATTAGAATTTGATTCTAGATTGTTACTGTTGAAGTAAGCATTCATTAGATCACCACGTGTGCTCCTCAACTGCCACTACAAATCTACAATCTCCTTTAACATCAAAATTACAAGAAATTGCTACGAATTTAACCCAACAAACTCCAATCCAATGTCTTTCTCTTCAATTTTCAGCACCACATTACCCTCATTTTCAATTCCAAGTGCGAGAAATCGCCCTAGTTTTTGTTACCCTTCAATAGTTCTTCACTCAATTTCCAGAAAAATCCCACTTGGGTCTTTGAATTCATCGTTTTTTCAAGATGGGTTTTCTCTAAAATCATTCAATTTTAATGGGGTTTCTGTAAATTCCACACAGAATTCTTCTTCTGCTAAAGTTCATGCTAGAGCAGCTACTGAGCAAACCATCCATGATTTTACTGTCAAGGTAATTGCTTCCCCCTAAATTTTGCCCAAAATGTGGATAAATTTGTAATCTTCCCTTTTATTATACTTCGTATTAAATAACAATTGCAAGTTTTGAGCTTTTTGATCTGTGATTTGTGATTGATTGCGTTTAAACTGTAGAACATTTAGTTACTTTGTAGTGCACAAGGTGATAATTAAGGTTAGATTAGTAGAATATATGCTGGTTTCTGTTAAATGTTCAACCTGTTTATTAGTTGTGGGATGGGGTTTTAGCCGTTTAGGTCAAAAACGAATTAGGTGTTACCGAAGCATGAAGAGTAGAGGTCAATGGAGCTTATATTATGGCCAATACCGAAGTTTATGTTGATTAGAATTAAAACGAGGGACAGCCTCCACTATAGAGGCAAGCTATACCTTGACGGCTGGGGTGATTACCGGTTGTATGTTGAATTGTCGCGGTAGTTGTAGTATCTTGTATTGTAGTTGAGTTGTTTGAATAACTTTGATTTGAATAACCTTGATTTGAATAACCTTGATTTTGAGGTTAAAGTGTGAATGATTAAGGATGTATTGCCTCCTATTCTAGTTTAAGCATACCTGTTATCCAAGCATTGTTTATGACTCAGAATTATATTTTGAGTCTTTTGTTGCTTTTCCACATCCTTGGATATCACTTGGTAGCAGGGGTTTTGTGCCTAGAAATGGAAAATTGTTTACATTAGTAGGTTGCCTGACTTGTCTCTAGTGTCTAGCATATCGACTATCAAACGCAAGACACGGTAAAATTGTGGAACTGATTGTAATGTATATGATGCAGGATATTGATGGAAAAGATGTTGCTCTGAGCAAATTCAAGGGGAAGGCTCTTCTAATAGTCAATGTTGCTTCAAAGTGGTACATGTTCCATCTCCCTTTAAAATTGCTTTTTACTCAAAGACATGGTTATCTTATGTACAGTTTGCTTTGATACCTAAGAATGCATGTGTGTATATCACAATGAAATGGTTGCATTTTGTTTTCAGTGGTTTGACGTCATCAAACTATTCGGAACTCTCACAAGTGTATGAAAAGTACAAAACTCAGGGTAAGTTGGGCATTTCGGTATTATTGTGTTCGTTCTTATTTTTCCAAACCTTTAGGCGGAGTCCTTTTGTTAAAAAGAAACATGTGAATCTTTTATAGTTACGAGTATTGGTTTATTACAGCCTTCACTCTTCAGTATAATCACCTGAGTATTCTTTTGTGCAGCCTCGTGAATCTATGTGTACTTTTAGCAGAGCAATCATAAGTGAACATATTCAATAGTTTCTTTAGTATATACTTTGGTTTCTTTTGGCATTCTTCTCAATACAAGCTTGTAGGTTTAATTCTACCAAAGTGCATTTCTAGAAACAAATGCTCTTTATTGGTTTGAATAATCTCAAGACTTTCTTCTCTATTATTGTACAGACTGAAAAATGAGATAATAACTGTTTTCCATGTGCAGGGTTTGAGATTCTAGCATTCCCATGCAATCAATTTGGAGGCCAAGAACCTGGCTCAAATCCTGAGATTAAGAAATTCGCATGTACAAGATTCAAAGCTGAATACCCCATTTTTGATAAGGTTTGTTAGTGAACTCATTCCATTAGCTTTTAATCGCCAGAGAACCATACTTGCCCAGTTACTGACACCATGACTGCTACTGCTACTGAATGTAACAGGTGGACGTGAATGGTCCAAACACAGCCCCGGTTTACCAGTTCCTCAAGTCAAGCGCTGGTGGGTTTTTGGGTGACTTGGTCAAGTGGAACTTCGAAAAGTTTCTGGTGGACAAAAATGGCAAGGTTGTAGAGCGATACCCACCTACAACATCCCCTCTCCAGATTGAGGTGTGTTCCGGAATTCTTTTATTTCAATTTCTGACTAATTGTACATTAATAATTAGATGTTGTTGCTATATCAAGATTCAAGAGGCCGAAGACTTCTTTTCCCCTTTATCTTTGTATGTATGCTGTGCTTTTGTCTATGCTTTGTCAAACTGGCGCACCACTGCCCTGACCTTATTAGAGTCTATCTCATGCATGCCGTTTGCTTTGGTTATTTCTATCATCTGTTTACACTGTGACATATAGGGTGGTTCTACTATTTTGGATTATTTTTCAAGTGAAAATGTTTCCTAGTTTTTTCCCCATTATGCTAATTGCTAACAGGAGCAGCAAATTGCAAGAGATGATTTGGCATTGAGAGTTGAAAGATCCTTATGAAGTGCTTCCCTCTTCTTTTGGACATGGCGACAATTAGTAGTAGTAGTAGTTGTCCTAAATCACGACTGTAAACTCAGACGAATAAGCTCTTGTCCTTTTATGTCATTTAGACAGTCAGGGTATGCTTGGTATAAATATAAGGAAGGAAATGGAAAGGAAACAAATAAGGAGGGGAAAGAGTAATGCTAGCTATTACCATTATTAGTTGTTTGGTATACATTAGGAAATGAATCACTTGTAACAAATTGGGGATTGAGGAGGGTAACAGTTTTGTTACCAAAGGGTTGGGAGAGGTAACAAATGGTGGTGATGGTTACCCTTAGAAAATAGATAGTGTTTACCACACCTCTCATACCAAACATTAGGTAATGGAAATAGTTAAGCGATTTCATTTCCATTACTTAAAAACTCTATACCGAACATGCTCTCAATAAATAACAAAGACAGAGTATCATTTTCTTATTTCCATTCTACAAGTTCATACTAGCTTATACTGGTGTCTGCTAATCAAATTTCTGTATGTGCTAAAGTCCTTAATTTTCTTTGAACTTACAGAAAGACATTAAGAAGTTGCTGGCAGCATAAAACTTCACGGTATACACCCCCAAAGAGAAGATAAGTGCGGTATAGTTTCATCACTGTTGCTGAATATTTTTTGTTACTCTTTTTGCTGTTTCTTTTCGAGGGAATGAGAATGACTATATTTGTACTGGTACACCTACCAAATGCAATGTAATCCTGAACTCCTGATAAAGATAGGAGTATTTAAATGCTATACATTGTTGGTGAATTAGCAATAGCTAGCTCGGCTCGGCTCGTATCGTATCGTATCAGGAGCGTCAAAACAATACTGTGATGTTGTAAATGGTTTCCTTTCTCTTACATGCGGACATGCCTTTGTTATTGTTACCTTTTATTTTATTTTTACAGAAAGTCTAATGAACTTTTAACTTTTTTAATCAGCATTAGCGCAAAATGCTGAATTGTTAATAAGTTTCAACTTTTAAATTACTGAAGTTACTCGTCTGAATGTCTGAGATCAATATTACCAAACATGTACCACACAAAAAAAAAATCAAAATTTATCATCAATATTAAATTATTAATCGATTACTCCCTCCGTTACTTAATACTCGCACCCATATTATATCAAAACAAA TTTTTAACTAAAATTACCTTATCTGAATTTAATTTTGCTGAAAAAATTTAACTTATTTGAATTTATTTTGCTGAAAAAACTTATTTGTGTGTTAAGTTATACGCATAATGAACGTTGCTTGAGCATTCACCACAGGATAATTAGAATTTGATTCTAGATTGTTACTGTTGAAGTAAGCATTCATTAGATCACCACGTGTGCTCCTCAACTGCCACTACAAATCTACAATCTCCTTTAACATCAAAATTACAAGAAATTGCTACGAATTTAACCCAACAAACTCCAATCCAATGTCTTTCTCTTCAATTTTCAGCACCACATTACCCTCATTTTCAATTCCAAGTGCGAGAAATCGCCCTAGTTTTTGTTACCCTTCAATAGTTCTTCACTCAATTTCCAGAAAAATCCCACTTGGGTCTTTGAATTCATCGTTTTTTCAAGATGGGTTTTCTCTAAAATCATTCAATTTTAATGGGGTTTCTGTAAATTCCACACAGAATTCTTCTTCTGCTAAAGTTCATGCTAGAGCAGCTACTGAGCAAACCATCCATGATTTTACTGTCAAGGATATTGATGGAAAAGATGTTGCTCTGAGCAAATTCAAGGGGAAGGCTCTTCTAATAGTCAATGTTGCTTCAAAGTGTGGTTTGACGTCATCAAACTATTCGGAACTCTCACAAGTGTATGAAAAGTACAAAACTCAGGGGTTTGAGATTCTAGCATTCCCATGCAATCAATTTGGAGGCCAAGAACCTGGCTCAAATCCTGAGATTAAGAAATTCGCATGTACAAGATTCAAAGCTGAATACCCCATTTTTGATAAGGTGGACGTGAATGGTCCAAACACAGCCCCGGTTTACCAGTTCCTCAAGTCAAGCGCTGGTGGGTTTTTGGGTGACTTGGTCAAGTGGAACTTCGAAAAGTTTCTGGTGGACAAAAATGGCAAGGTTGTAGAGCGATACCCACCTACAACATCCCCTCTCCAGATTGAGAAAGACATTAAGAAGTTGCTGGCAGCATAAAACTTCACGGTATACACCCCCAAAGAGAAGATAAGTGCGGTATAGTTTCATCACTGTTGCTGAATATTTTTTGTTACTCTTTTTGCTGTTTCTTTTCGAGGGAATGAGAATGACTATATTTGTACTGGTACACCTACCAAATGCAATGTAATCCTGAACTCCTGATAAAGATAGGAGTATTTAAATGCTATACATTGTTGGTGAATTAGCAATAGCTAGCTCGGCTCGGCTCGTATCGTATCGTATCAGGAGCGTCAAAACAATACTGTGATGTTGTAAATGGTTTCCTTTCTCTTACATGCGGACATGCCTTTGTTATTGTTACCTTTTATTTTATTTTTACAGAAAGTCTAATGAACTTTTAACTTTTTTAATCAGCATTAGCGCAAAATGCTGAATTGTTAATAAGTTTCAACTTTTAAATTACTGAAGTTACTCGTCTGAATGTCTGAGATCAATATTACCAAACATGTACCACACAAAAAAAAAATCAAAATTTATCATCAATATTAAATTATTAATCGATTACTCCCTCCGTTACTTAATACTCGCACCCATATTATATCAAAACAAA ATGTCTTTCTCTTCAATTTTCAGCACCACATTACCCTCATTTTCAATTCCAAGTGCGAGAAATCGCCCTAGTTTTTGTTACCCTTCAATAGTTCTTCACTCAATTTCCAGAAAAATCCCACTTGGGTCTTTGAATTCATCGTTTTTTCAAGATGGGTTTTCTCTAAAATCATTCAATTTTAATGGGGTTTCTGTAAATTCCACACAGAATTCTTCTTCTGCTAAAGTTCATGCTAGAGCAGCTACTGAGCAAACCATCCATGATTTTACTGTCAAGGATATTGATGGAAAAGATGTTGCTCTGAGCAAATTCAAGGGGAAGGCTCTTCTAATAGTCAATGTTGCTTCAAAGTGTGGTTTGACGTCATCAAACTATTCGGAACTCTCACAAGTGTATGAAAAGTACAAAACTCAGGGGTTTGAGATTCTAGCATTCCCATGCAATCAATTTGGAGGCCAAGAACCTGGCTCAAATCCTGAGATTAAGAAATTCGCATGTACAAGATTCAAAGCTGAATACCCCATTTTTGATAAGGTGGACGTGAATGGTCCAAACACAGCCCCGGTTTACCAGTTCCTCAAGTCAAGCGCTGGTGGGTTTTTGGGTGACTTGGTCAAGTGGAACTTCGAAAAGTTTCTGGTGGACAAAAATGGCAAGGTTGTAGAGCGATACCCACCTACAACATCCCCTCTCCAGATTGAGAAAGACATTAAGAAGTTGCTGGCAGCATAA MSFSSIFSTTLPSFSIPSARNRPSFCYPSIVLHSISRKIPLGSLNSSFFQDGFSLKSFNFNGVSVNSTQNSSSAKVHARAATEQTIHDFTVKDIDGKDVALSKFKGKALLIVNVASKCGLTSSNYSELSQVYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKKFACTRFKAEYPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVVERYPPTTSPLQIEKDIKKLLAA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05365.1 vs. NCBI nr
Match: gi|902205161|gb|KNA15107.1| (hypothetical protein SOVF_101230 [Spinacia oleracea]) HSP 1 Score: 485.0 bits (1247), Expect = 7.900e-134 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1
BLAST of Spo05365.1 vs. NCBI nr
Match: gi|731320471|ref|XP_010670824.1| (PREDICTED: probable phospholipid hydroperoxide glutathione peroxidase [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 397.5 bits (1020), Expect = 1.700e-107 Identity = 204/243 (83.95%), Postives = 220/243 (90.53%), Query Frame = 1
BLAST of Spo05365.1 vs. NCBI nr
Match: gi|596205287|ref|XP_007223774.1| (hypothetical protein PRUPE_ppa010584mg [Prunus persica]) HSP 1 Score: 348.6 bits (893), Expect = 8.900e-93 Identity = 182/246 (73.98%), Postives = 205/246 (83.33%), Query Frame = 1
BLAST of Spo05365.1 vs. NCBI nr
Match: gi|645227727|ref|XP_008220655.1| (PREDICTED: phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Prunus mume]) HSP 1 Score: 346.7 bits (888), Expect = 3.400e-92 Identity = 182/246 (73.98%), Postives = 204/246 (82.93%), Query Frame = 1
BLAST of Spo05365.1 vs. NCBI nr
Match: gi|1009176951|ref|XP_015869706.1| (PREDICTED: phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic-like [Ziziphus jujuba]) HSP 1 Score: 345.1 bits (884), Expect = 9.800e-92 Identity = 180/243 (74.07%), Postives = 202/243 (83.13%), Query Frame = 1
BLAST of Spo05365.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R8P6_SPIOL (Glutathione peroxidase OS=Spinacia oleracea GN=SOVF_101230 PE=3 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 5.500e-134 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1
BLAST of Spo05365.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CT55_BETVU (Glutathione peroxidase OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g044150 PE=3 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 1.200e-107 Identity = 204/243 (83.95%), Postives = 220/243 (90.53%), Query Frame = 1
BLAST of Spo05365.1 vs. UniProtKB/TrEMBL
Match: M5XTR8_PRUPE (Glutathione peroxidase OS=Prunus persica GN=PRUPE_ppa010584mg PE=3 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 6.200e-93 Identity = 182/246 (73.98%), Postives = 205/246 (83.33%), Query Frame = 1
BLAST of Spo05365.1 vs. UniProtKB/TrEMBL
Match: W9SDB3_9ROSA (Glutathione peroxidase OS=Morus notabilis GN=L484_025494 PE=3 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 9.900e-91 Identity = 176/237 (74.26%), Postives = 197/237 (83.12%), Query Frame = 1
BLAST of Spo05365.1 vs. UniProtKB/TrEMBL
Match: A0A0D2N2X5_GOSRA (Glutathione peroxidase OS=Gossypium raimondii GN=B456_001G038600 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 3.700e-90 Identity = 174/244 (71.31%), Postives = 197/244 (80.74%), Query Frame = 1
BLAST of Spo05365.1 vs. ExPASy Swiss-Prot
Match: GPX7_ARATH (Putative glutathione peroxidase 7, chloroplastic OS=Arabidopsis thaliana GN=GPX7 PE=3 SV=2) HSP 1 Score: 313.5 bits (802), Expect = 2.000e-84 Identity = 166/244 (68.03%), Postives = 194/244 (79.51%), Query Frame = 1
BLAST of Spo05365.1 vs. ExPASy Swiss-Prot
Match: GPX1_ARATH (Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic OS=Arabidopsis thaliana GN=GPX1 PE=2 SV=2) HSP 1 Score: 310.5 bits (794), Expect = 1.700e-83 Identity = 161/242 (66.53%), Postives = 189/242 (78.10%), Query Frame = 1
BLAST of Spo05365.1 vs. ExPASy Swiss-Prot
Match: GPX1_PEA (Phospholipid hydroperoxide glutathione peroxidase, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 5.400e-82 Identity = 159/243 (65.43%), Postives = 189/243 (77.78%), Query Frame = 1
BLAST of Spo05365.1 vs. ExPASy Swiss-Prot
Match: GPX4_CITSI (Probable phospholipid hydroperoxide glutathione peroxidase OS=Citrus sinensis GN=CSA PE=1 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 4.900e-67 Identity = 119/160 (74.38%), Postives = 137/160 (85.62%), Query Frame = 1
BLAST of Spo05365.1 vs. ExPASy Swiss-Prot
Match: GPX6_ARATH (Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial OS=Arabidopsis thaliana GN=GPX6 PE=2 SV=2) HSP 1 Score: 253.8 bits (647), Expect = 1.900e-66 Identity = 139/226 (61.50%), Postives = 165/226 (73.01%), Query Frame = 1
BLAST of Spo05365.1 vs. TAIR (Arabidopsis)
Match: AT4G31870.1 (glutathione peroxidase 7) HSP 1 Score: 313.5 bits (802), Expect = 1.100e-85 Identity = 166/244 (68.03%), Postives = 194/244 (79.51%), Query Frame = 1
BLAST of Spo05365.1 vs. TAIR (Arabidopsis)
Match: AT2G25080.1 (glutathione peroxidase 1) HSP 1 Score: 310.5 bits (794), Expect = 9.400e-85 Identity = 161/242 (66.53%), Postives = 189/242 (78.10%), Query Frame = 1
BLAST of Spo05365.1 vs. TAIR (Arabidopsis)
Match: AT4G11600.1 (glutathione peroxidase 6) HSP 1 Score: 253.8 bits (647), Expect = 1.000e-67 Identity = 139/226 (61.50%), Postives = 165/226 (73.01%), Query Frame = 1
BLAST of Spo05365.1 vs. TAIR (Arabidopsis)
Match: AT2G43350.1 (glutathione peroxidase 3) HSP 1 Score: 242.7 bits (618), Expect = 2.400e-64 Identity = 112/159 (70.44%), Postives = 131/159 (82.39%), Query Frame = 1
BLAST of Spo05365.1 vs. TAIR (Arabidopsis)
Match: AT2G31570.1 (glutathione peroxidase 2) HSP 1 Score: 235.0 bits (598), Expect = 5.000e-62 Identity = 108/158 (68.35%), Postives = 131/158 (82.91%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05365.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05365.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05365.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo05365.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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