Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCCTTATTCTAATGAAGAAGTAGCACCAGCACCTCGGCAGCTCCGGTGGTTCTTTTCCCAGTCTCCGCTGCTCCGACAACCGGACGATGATAAAAGCTCTTCCATAACTATTCACATAATGAGAAATATTAGTTACTTGGATGAATCAAATGTTGATCCCCAACAAGATTGGCTTCCTATCACTGAATCTAGAAATGGTAACGCCTTCTACGCTGCCTTTCATACCATTTCTTCAGGGATTGGTTTCCAAGCTCTTATGCTTCCCTTAGCCTTCGCATCGCTTGGTTGGTACGTAATTAATTAGTTTCACTTCTTAATCTATAATTAATTAAGTTGCCTAAACATCGACCATTTACTACGGAGTAATATATTATTCTTCAACTATTCAATACGTAGTACGTACGTAGTAGTATGGAGCATATACATATACAAAAATACAATTATACAGTACGTTGGGCAATGGGCATGCATGTACTAGTATATAATTTAACTAACCTATTACGGAGTGAGTACTAACTTTACAATAAACTATAATCTCATACTTCCTCTGATTTTAATACTCACAACGTTTGTTACTTTTACGCATGTCAATGCAGAACTTTGGTCATTTATATCTTAAATTCTCTTTGTGCAAAAATCATAAAAAATTGATATTTTGAAAATACACATTAAGACGAATCTAACAAGATCTCACATGACTATGTTTTATCTTATATAAAAAAAACACTAAAAATAGTCAAAGTAGTTTATATAAATAGTGTAAAAAGTCTAAAAAGTTACGAATATTAAAAAACGGAAGATTTTAGTTACATTGTGTTTAAGGATGGTGTATGTTTTGAGGTAAAGATGTTAAGTTTAACATACATTTCTGTTTATCTTAAACAGGATTTGGGGCATAACATGTCTTTCGTTGGGTTACGTATGGCAGTTGTACACAATATGGTTGCTAATTCAACTCCATGAATCGGAGAACGGCACACGCTATAGTAGATACCTTCGCCTATCCATGGCAGCCTTTGGTGAGCTCAGCTTAAATTCTTTCTATATATCTACTCCAAAAAATATTGAAATCGTAAGTAAGAAATTACACAAATTCTTATTTACAATGGGTGCACAATAAATATTGTACACCGGAGTAAAAGTTGACTCAAAATGCTTAAAAGTTACATTTATATATGTAAAAGTTATCTATTTTTTAATGATAAATTTTTTCATTTGAATAAAAATTATTTCTTCAAAATCACTAATAATGTATAAATTAATCGTTTGACCCTTTAAAATGTTTATCTAACTTTATAATATAAAAGTTACAGAAAAATAGGTTAAAGTTACGAAAATTTACATAAAAGTTATCTTGGTGTACAATAAATTTATTGTACACCTTGTACGCGCAAGACCTTTTGAAGAAATTATTCATATCGAAATTTTACAACCTACTCTCTTTGTCCCTTAATACTCGCACCATTTTGATTTTTTGCACTATTCACAAAACTCACTACCATTTTGACTCTATTTTATTTATAATATATGAAAACAAATGTTAGTATATAATATAATATATTGTTGGCTTCATAATATATATTTTTAAAATATTAATATTTTTATAAGTTTTTATAATATATAGTTAAATATATTGGTGGTCAACGTTGTGCATTGGCAAGCGTATGCGTGGCCAGTCAAAACGGTGCAAGTATTAAGTGACAGAGGGAGTAAGTTCTAAAAATGAGTGGGCAACCATTCTAGGAAGGACTCCCCAATGGACGTACTAATTAATACAACTTGACACAAGTTCATTATCGATGATCTGTAATGCTATTGTTATTATTATGGTCTCCCAAACTGGTCGTAACATAAAATATTATCGAACAAACCAGTACATGATATGTTCATCAATTTCCAACTTAAAACATCCAAGAACACTAAAGCAACTTAGAAAAGTACGTTAATTTCCTTTACACGCAAGATCAACTTGAAAATATGAATTAGTCCATTAAAAGGGCCTAAAACTTTTATGTTTGAACAACTTTTTAAAGCAGCTTCCTTGATAATGTAATGTAGGTGAAAATCTAGGGAAAATGCTATCCTTGTTCCCAGTCATGTACTTATCAGGTGGCACTTGTGTGGCTCTAATTATGTTTGGAGGTGGGACCATCAAGATCTTCTTCGAAACCTTATGTGGGCCCACTTGTAACCCGTTAACCACTATAGAATGGTACATGGTCTTCACTTCTTGTGCCGCGATCATGGCACAGCTGCCCAACTTAAACTCAATCGCCTGGGTCTCCTTCGTCGGATCAGTAACCGCAGTAGGATATTGTACCCTAATATGGGTCGTATCCGTATGCAAAGACCGACCCACAAGTATGTCATACGGGCCGACCCATGTTTGGTTTCATGCTGATAGGGTTTGTGAGGTACTCAATGCAATTGGGATGATTGCTTTGGCTTTTAGAGGGCACAACTTAGTGCTTGAAATACAGGTAAAAGAGATGATAATAAGGGTCAATTATTATAATTTCACATTTTTTTGGATAGAAAAAGCTCAAAAATAAATGATATAGACGGAATTCTATCCCAGAATTTAACGCAAATGCGTGTTTTTGGTACAGGGAACTATGCCAAGCAGTATAAAGCAACCATCAAGAATAGCAATGTGGCGAGGGGTGAAGTTTGCCTACATGGTCATTGGGTTGTGCTTGTTTCCCGTCGCAATTGGCGGATACTGGGCCTATGGAAACTTGGTTCGTACAAACATCAATTTTTGTTCCTGATAATATGCCTGGTGTTTAAGTTCAAACGTGTTTGGTTGAGAATTTGGGAAGGAAGAAGGAAGAAGGAAGGGAAGAGAGAAAAAAGGCAAGGGAAATGGATGATAATATGACATTCCTTTTTAAATTGGAAAAGTTTTTCCAATGTCAAAGCGGTCTTGTCATCCAACACAAGCCGGGCTTATACCGAGCTTTCACCTTACCTGCACCAAAAACTAAAAGGAACAATGGGGAAAACTAATTTTAACTGTTTTCTTTCCAACCAAACACATACACTCTACATGCTTTTTACATCGAATTTTTTTTTATGAAAACTTAACACAGAAAAAATATTAAATAGGCGTCACTTGGAACCAGAAGAAAAATTAACTCTGCCATTACCTTCACCTGCTATAAGTAACCTTTTCGTTTCTTCTAATTTGTGTTGTATTTCTACAGATTATACCTACAAATGAGGGGCTACTACGAGTCTTGTATGAATACCATGGGAATGACACATCCAAGTTTGCACTGTGTCTCACAAGCTTACTTGTAGTGATACATTGTCTGTGCTCATTCCAGATATATGCAATGCCAGTGTTTGACAACCTGGAGTTTCGATTCACAAGCAGCAAGAAGAAACCATGTCCTCGTTGGTTGAGATCAGGAATACGAGCTTTCTTTGGATGCTTAACAGTCTTCATAGCATCTGCACTACCATTCTTGCCGAGTTTGGCAGGTCTATTAGGGGGCCTTGCTCTGTCTCTCACCTTAGCATATCCCTGTCTTATGTGGATACAGATTAAGAAACCTCAAGAGTTGAGTTTTATGTGGTACCTTAACATTCTGCTAGGGTGTTTTGGGATACTTCTGAGCATTCTGCTTGTGACTGGAGCCATATGGAGTATGTCCATCAAAGGGATCCCAGTCCACTTCTTCAACCCAGATGAAACAAGATAG ATGATGCCTTATTCTAATGAAGAAGTAGCACCAGCACCTCGGCAGCTCCGGTGGTTCTTTTCCCAGTCTCCGCTGCTCCGACAACCGGACGATGATAAAAGCTCTTCCATAACTATTCACATAATGAGAAATATTAGTTACTTGGATGAATCAAATGTTGATCCCCAACAAGATTGGCTTCCTATCACTGAATCTAGAAATGGTAACGCCTTCTACGCTGCCTTTCATACCATTTCTTCAGGGATTGGTTTCCAAGCTCTTATGCTTCCCTTAGCCTTCGCATCGCTTGGTTGGATTTGGGGCATAACATGTCTTTCGTTGGGTTACGTATGGCAGTTGTACACAATATGGTTGCTAATTCAACTCCATGAATCGGAGAACGGCACACGCTATAGTAGATACCTTCGCCTATCCATGGCAGCCTTTGGTGAAAATCTAGGGAAAATGCTATCCTTGTTCCCAGTCATGTACTTATCAGGTGGCACTTGTGTGGCTCTAATTATGTTTGGAGGTGGGACCATCAAGATCTTCTTCGAAACCTTATGTGGGCCCACTTGTAACCCGTTAACCACTATAGAATGGTACATGGTCTTCACTTCTTGTGCCGCGATCATGGCACAGCTGCCCAACTTAAACTCAATCGCCTGGGTCTCCTTCGTCGGATCAGTAACCGCAGTAGGATATTGTACCCTAATATGGGTCGTATCCGGAACTATGCCAAGCAGTATAAAGCAACCATCAAGAATAGCAATGTGGCGAGGGGTGAAGTTTGCCTACATGGTCATTGGGTTGTGCTTGTTTCCCGTCGCAATTGGCGGATACTGGGCCTATGGAAACTTGATTATACCTACAAATGAGGGGCTACTACGAGTCTTGTATGAATACCATGGGAATGACACATCCAAGTTTGCACTGTGTCTCACAAGCTTACTTGTAGTGATACATTGTCTGTGCTCATTCCAGATATATGCAATGCCAGTGTTTGACAACCTGGAGTTTCGATTCACAAGCAGCAAGAAGAAACCATGTCCTCGTTGGTTGAGATCAGGAATACGAGCTTTCTTTGGATGCTTAACAGTCTTCATAGCATCTGCACTACCATTCTTGCCGAGTTTGGCAGGTCTATTAGGGGGCCTTGCTCTGTCTCTCACCTTAGCATATCCCTGTCTTATGTGGATACAGATTAAGAAACCTCAAGAGTTGAGTTTTATGTGGTACCTTAACATTCTGCTAGGGTGTTTTGGGATACTTCTGAGCATTCTGCTTGTGACTGGAGCCATATGGAGTATGTCCATCAAAGGGATCCCAGTCCACTTCTTCAACCCAGATGAAACAAGATAG ATGATGCCTTATTCTAATGAAGAAGTAGCACCAGCACCTCGGCAGCTCCGGTGGTTCTTTTCCCAGTCTCCGCTGCTCCGACAACCGGACGATGATAAAAGCTCTTCCATAACTATTCACATAATGAGAAATATTAGTTACTTGGATGAATCAAATGTTGATCCCCAACAAGATTGGCTTCCTATCACTGAATCTAGAAATGGTAACGCCTTCTACGCTGCCTTTCATACCATTTCTTCAGGGATTGGTTTCCAAGCTCTTATGCTTCCCTTAGCCTTCGCATCGCTTGGTTGGATTTGGGGCATAACATGTCTTTCGTTGGGTTACGTATGGCAGTTGTACACAATATGGTTGCTAATTCAACTCCATGAATCGGAGAACGGCACACGCTATAGTAGATACCTTCGCCTATCCATGGCAGCCTTTGGTGAAAATCTAGGGAAAATGCTATCCTTGTTCCCAGTCATGTACTTATCAGGTGGCACTTGTGTGGCTCTAATTATGTTTGGAGGTGGGACCATCAAGATCTTCTTCGAAACCTTATGTGGGCCCACTTGTAACCCGTTAACCACTATAGAATGGTACATGGTCTTCACTTCTTGTGCCGCGATCATGGCACAGCTGCCCAACTTAAACTCAATCGCCTGGGTCTCCTTCGTCGGATCAGTAACCGCAGTAGGATATTGTACCCTAATATGGGTCGTATCCGGAACTATGCCAAGCAGTATAAAGCAACCATCAAGAATAGCAATGTGGCGAGGGGTGAAGTTTGCCTACATGGTCATTGGGTTGTGCTTGTTTCCCGTCGCAATTGGCGGATACTGGGCCTATGGAAACTTGATTATACCTACAAATGAGGGGCTACTACGAGTCTTGTATGAATACCATGGGAATGACACATCCAAGTTTGCACTGTGTCTCACAAGCTTACTTGTAGTGATACATTGTCTGTGCTCATTCCAGATATATGCAATGCCAGTGTTTGACAACCTGGAGTTTCGATTCACAAGCAGCAAGAAGAAACCATGTCCTCGTTGGTTGAGATCAGGAATACGAGCTTTCTTTGGATGCTTAACAGTCTTCATAGCATCTGCACTACCATTCTTGCCGAGTTTGGCAGGTCTATTAGGGGGCCTTGCTCTGTCTCTCACCTTAGCATATCCCTGTCTTATGTGGATACAGATTAAGAAACCTCAAGAGTTGAGTTTTATGTGGTACCTTAACATTCTGCTAGGGTGTTTTGGGATACTTCTGAGCATTCTGCTTGTGACTGGAGCCATATGGAGTATGTCCATCAAAGGGATCCCAGTCCACTTCTTCAACCCAGATGAAACAAGATAG MMPYSNEEVAPAPRQLRWFFSQSPLLRQPDDDKSSSITIHIMRNISYLDESNVDPQQDWLPITESRNGNAFYAAFHTISSGIGFQALMLPLAFASLGWIWGITCLSLGYVWQLYTIWLLIQLHESENGTRYSRYLRLSMAAFGENLGKMLSLFPVMYLSGGTCVALIMFGGGTIKIFFETLCGPTCNPLTTIEWYMVFTSCAAIMAQLPNLNSIAWVSFVGSVTAVGYCTLIWVVSGTMPSSIKQPSRIAMWRGVKFAYMVIGLCLFPVAIGGYWAYGNLIIPTNEGLLRVLYEYHGNDTSKFALCLTSLLVVIHCLCSFQIYAMPVFDNLEFRFTSSKKKPCPRWLRSGIRAFFGCLTVFIASALPFLPSLAGLLGGLALSLTLAYPCLMWIQIKKPQELSFMWYLNILLGCFGILLSILLVTGAIWSMSIKGIPVHFFNPDETR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05410.1 vs. NCBI nr
Match: gi|734406048|gb|KHN33817.1| (Lysine histidine transporter-like 8 [Glycine soja]) HSP 1 Score: 540.4 bits (1391), Expect = 2.900e-150 Identity = 266/392 (67.86%), Postives = 312/392 (79.59%), Query Frame = 1
BLAST of Spo05410.1 vs. NCBI nr
Match: gi|902201984|gb|KNA14144.1| (hypothetical protein SOVF_110100 [Spinacia oleracea]) HSP 1 Score: 483.8 bits (1244), Expect = 3.200e-133 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1
BLAST of Spo05410.1 vs. NCBI nr
Match: gi|702368328|ref|XP_010061144.1| (PREDICTED: lysine histidine transporter-like 8 [Eucalyptus grandis]) HSP 1 Score: 474.2 bits (1219), Expect = 2.600e-130 Identity = 252/450 (56.00%), Postives = 308/450 (68.44%), Query Frame = 1
BLAST of Spo05410.1 vs. NCBI nr
Match: gi|604297269|gb|EYU17533.1| (hypothetical protein MIMGU_mgv1a020550mg [Erythranthe guttata]) HSP 1 Score: 472.2 bits (1214), Expect = 9.700e-130 Identity = 249/450 (55.33%), Postives = 307/450 (68.22%), Query Frame = 1
BLAST of Spo05410.1 vs. NCBI nr
Match: gi|255539144|ref|XP_002510637.1| (PREDICTED: lysine histidine transporter-like 8 [Ricinus communis]) HSP 1 Score: 462.2 bits (1188), Expect = 1.000e-126 Identity = 252/474 (53.16%), Postives = 310/474 (65.40%), Query Frame = 1
BLAST of Spo05410.1 vs. UniProtKB/TrEMBL
Match: A0A0B2RPS4_GLYSO (Lysine histidine transporter-like 8 OS=Glycine soja GN=glysoja_013823 PE=4 SV=1) HSP 1 Score: 540.4 bits (1391), Expect = 2.000e-150 Identity = 266/392 (67.86%), Postives = 312/392 (79.59%), Query Frame = 1
BLAST of Spo05410.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5E3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_110100 PE=4 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 2.300e-133 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1
BLAST of Spo05410.1 vs. UniProtKB/TrEMBL
Match: A0A022PRU2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020550mg PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 6.800e-130 Identity = 249/450 (55.33%), Postives = 307/450 (68.22%), Query Frame = 1
BLAST of Spo05410.1 vs. UniProtKB/TrEMBL
Match: B9R8J4_RICCO (Amino acid transporter, putative OS=Ricinus communis GN=RCOM_1600220 PE=4 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 7.000e-127 Identity = 252/474 (53.16%), Postives = 310/474 (65.40%), Query Frame = 1
BLAST of Spo05410.1 vs. UniProtKB/TrEMBL
Match: A0A059BPN2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01731 PE=4 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 9.200e-127 Identity = 248/450 (55.11%), Postives = 306/450 (68.00%), Query Frame = 1
BLAST of Spo05410.1 vs. ExPASy Swiss-Prot
Match: LHTL8_ARATH (Lysine histidine transporter-like 8 OS=Arabidopsis thaliana GN=AATL1 PE=1 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 5.300e-67 Identity = 119/200 (59.50%), Postives = 158/200 (79.00%), Query Frame = 1
BLAST of Spo05410.1 vs. ExPASy Swiss-Prot
Match: LHTL7_ARATH (Lysine histidine transporter-like 7 OS=Arabidopsis thaliana GN=At4g35180 PE=2 SV=2) HSP 1 Score: 206.1 bits (523), Expect = 8.200e-52 Identity = 139/448 (31.03%), Postives = 223/448 (49.78%), Query Frame = 1
BLAST of Spo05410.1 vs. ExPASy Swiss-Prot
Match: LHT1_ARATH (Lysine histidine transporter 1 OS=Arabidopsis thaliana GN=LHT1 PE=1 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.400e-30 Identity = 69/182 (37.91%), Postives = 106/182 (58.24%), Query Frame = 1
BLAST of Spo05410.1 vs. ExPASy Swiss-Prot
Match: LHTL2_ARATH (Lysine histidine transporter-like 2 OS=Arabidopsis thaliana GN=At1g67640 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.100e-30 Identity = 75/214 (35.05%), Postives = 118/214 (55.14%), Query Frame = 1
BLAST of Spo05410.1 vs. ExPASy Swiss-Prot
Match: LHT2_ARATH (Lysine histidine transporter 2 OS=Arabidopsis thaliana GN=LHT2 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 2.600e-29 Identity = 67/187 (35.83%), Postives = 108/187 (57.75%), Query Frame = 1
BLAST of Spo05410.1 vs. TAIR (Arabidopsis)
Match: AT1G47670.1 (Transmembrane amino acid transporter family protein) HSP 1 Score: 256.5 bits (654), Expect = 3.000e-68 Identity = 119/200 (59.50%), Postives = 158/200 (79.00%), Query Frame = 1
BLAST of Spo05410.1 vs. TAIR (Arabidopsis)
Match: AT4G35180.1 (LYS/HIS transporter 7) HSP 1 Score: 206.1 bits (523), Expect = 4.600e-53 Identity = 139/448 (31.03%), Postives = 223/448 (49.78%), Query Frame = 1
BLAST of Spo05410.1 vs. TAIR (Arabidopsis)
Match: AT5G40780.1 (lysine histidine transporter 1) HSP 1 Score: 135.6 bits (340), Expect = 7.600e-32 Identity = 69/182 (37.91%), Postives = 106/182 (58.24%), Query Frame = 1
BLAST of Spo05410.1 vs. TAIR (Arabidopsis)
Match: AT1G67640.1 (Transmembrane amino acid transporter family protein) HSP 1 Score: 133.7 bits (335), Expect = 2.900e-31 Identity = 75/214 (35.05%), Postives = 118/214 (55.14%), Query Frame = 1
BLAST of Spo05410.1 vs. TAIR (Arabidopsis)
Match: AT1G24400.1 (lysine histidine transporter 2) HSP 1 Score: 131.3 bits (329), Expect = 1.400e-30 Identity = 67/187 (35.83%), Postives = 108/187 (57.75%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05410.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05410.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05410.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo05410.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
|