Spo05412 (gene)

Overview
NameSpo05412
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A1 (1.97.1.12) (PSI-A) (PsaA)
Locationchr5 : 65613940 .. 65614709 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAGGCCAGTTCAGTCCTTTGAGATTGAGATTCAACTTGCTTACAAGGCCTGCAGGAATTTGTTGGGTATTTGGAATAATTGGAATAAATAGAAGTATAAGTAGTCAAAAATTTGTATCTTTATTTACATTTTTTGTTTGGAAAAGAATCTGTTTTTATGTTATTTCGTACTGTACAAATTCTTTGTTTGTGTAATCGTTTTCCCACAAGGGGTAATGAAAAGAATTTTAGAATGGATTGATACCTATGTCTAGAAATGGGAATTTTTTTCGTACCCTTCGCTTTAGGGCGTCCTCAAGATATGTTTTCAGATACCGCTATACAATTACAACCTGTCTTCGCTCAATGGATACAAAACACCCATGCTTTAGCGCCTAGTGCAACGACTCCGGGTGCAACAGCAAGCACCAGTTTGACTTGGGGAGGTAGTGATTTAGTAGCAGTGGGTGGAAAAGTAGCCTTGTTACCCATTCCACTAGGGACCGCTGATTTTTTAGTCCACCACATTCATGCTTTTACAATTTATGTGACGATACTAATACTTCTAAAAGGTGTTCTATTTGCTCGTAGCTCTCGTTTGATACCGGATAAAGCAAATCTTGGGTTTCGCTTCCCTTGCGATGGACCTGGAAGAGGGGGAACATGCCAAGTATCCGCGTGGGATCATGTATGCTTAGGGCTATTCTGGATGTACAACGCAATTTCGGATGGAATTCTAGGATTCCGCCTTGGAGAAAATACTTTTATGCATACCTCTTCCGGTTGA

mRNA sequence

ATGGTTAGGCCAGTTCAGTCCTTTGAGATTGAGATTCAACTTGCTTACAAGGCCTGCAGGAATTTGTTGGGGCGTCCTCAAGATATGTTTTCAGATACCGCTATACAATTACAACCTGTCTTCGCTCAATGGATACAAAACACCCATGCTTTAGCGCCTAGTGCAACGACTCCGGGTGCAACAGCAAGCACCAGTTTGACTTGGGGAGGTAGTGATTTAGTAGCAGTGGGTGGAAAAGTAGCCTTGTTACCCATTCCACTAGGGACCGCTGATTTTTTAGTCCACCACATTCATGCTTTTACAATTTATGTGACGATACTAATACTTCTAAAAGGTGTTCTATTTGCTCGTAGCTCTCGTTTGATACCGGATAAAGCAAATCTTGGGTTTCGCTTCCCTTGCGATGGACCTGGAAGAGGGGGAACATGCCAAGTATCCGCGTGGGATCATGTATGCTTAGGGCTATTCTGGATGTACAACGCAATTTCGGATGGAATTCTAGGATTCCGCCTTGGAGAAAATACTTTTATGCATACCTCTTCCGGTTGA

Coding sequence (CDS)

ATGGTTAGGCCAGTTCAGTCCTTTGAGATTGAGATTCAACTTGCTTACAAGGCCTGCAGGAATTTGTTGGGGCGTCCTCAAGATATGTTTTCAGATACCGCTATACAATTACAACCTGTCTTCGCTCAATGGATACAAAACACCCATGCTTTAGCGCCTAGTGCAACGACTCCGGGTGCAACAGCAAGCACCAGTTTGACTTGGGGAGGTAGTGATTTAGTAGCAGTGGGTGGAAAAGTAGCCTTGTTACCCATTCCACTAGGGACCGCTGATTTTTTAGTCCACCACATTCATGCTTTTACAATTTATGTGACGATACTAATACTTCTAAAAGGTGTTCTATTTGCTCGTAGCTCTCGTTTGATACCGGATAAAGCAAATCTTGGGTTTCGCTTCCCTTGCGATGGACCTGGAAGAGGGGGAACATGCCAAGTATCCGCGTGGGATCATGTATGCTTAGGGCTATTCTGGATGTACAACGCAATTTCGGATGGAATTCTAGGATTCCGCCTTGGAGAAAATACTTTTATGCATACCTCTTCCGGTTGA

Protein sequence

MVRPVQSFEIEIQLAYKACRNLLGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVALLPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVCLGLFWMYNAISDGILGFRLGENTFMHTSSG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo05412.1Spo05412.1mRNA


Homology
[Close]
BLAST of Spo05412.1 vs. NCBI nr
Match: gi|11497525|ref|NP_054933.1| (photosystem I P700 chlorophyll a apoprotein A1 [Spinacia oleracea])

HSP 1 Score: 282.7 bits (722), Expect = 4.500e-73
Identity = 138/147 (93.88%), Postives = 141/147 (95.92%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSAT PGATASTSLTWGGSDLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYN+IS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNSISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. NCBI nr
Match: gi|630716135|ref|YP_009027970.1| (photosystem I P700 chlorophyll a (chloroplast) (chloroplast) [Chrysobalanus icaco])

HSP 1 Score: 282.3 bits (721), Expect = 5.800e-73
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAP AT PGATASTSLTWGGSDLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPDATAPGATASTSLTWGGSDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. NCBI nr
Match: gi|456330990|ref|YP_007476351.1| (PsaA (chloroplast) [Trithuria inconspicua])

HSP 1 Score: 282.3 bits (721), Expect = 5.800e-73
Identity = 137/147 (93.20%), Postives = 141/147 (95.92%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQP+FAQWIQNTHALAPSAT PGATASTSLTWGGSDLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPIFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKG+LFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGLLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISIVIFHF 608
[Close]
BLAST of Spo05412.1 vs. NCBI nr
Match: gi|749404156|gb|AJF20616.1| (PsaA [Chrysanthemum indicum])

HSP 1 Score: 282.3 bits (721), Expect = 5.800e-73
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSAT PGATASTSLTWGG DLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. NCBI nr
Match: gi|748994210|gb|AJE74609.1| (photosystem I P700 chlorophyll a (plastid) [Lygodesmia juncea])

HSP 1 Score: 282.3 bits (721), Expect = 5.800e-73
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSAT PGATASTSLTWGG DLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. UniProtKB/TrEMBL
Match: A0A023T0U9_9ROSI (Photosystem I P700 chlorophyll a apoprotein A1 OS=Hirtella physophora GN=psaA PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.100e-73
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAP AT PGATASTSLTWGGSDLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPDATAPGATASTSLTWGGSDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. UniProtKB/TrEMBL
Match: A0A023T1I4_9ROSI (Photosystem I P700 chlorophyll a apoprotein A1 OS=Licania alba GN=psaA PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.100e-73
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAP AT PGATASTSLTWGGSDLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPDATAPGATASTSLTWGGSDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. UniProtKB/TrEMBL
Match: A0A0A0PJZ8_9ASTR (Photosystem I P700 chlorophyll a apoprotein A1 OS=Artemisia montana GN=psaA PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.100e-73
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSAT PGATASTSLTWGG DLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. UniProtKB/TrEMBL
Match: M1FKX4_9ASTR (Photosystem I P700 chlorophyll a apoprotein A1 OS=Artemisia frigida GN=psaA PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.100e-73
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSAT PGATASTSLTWGG DLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. UniProtKB/TrEMBL
Match: A0A023T0K8_9ROSI (Photosystem I P700 chlorophyll a apoprotein A1 OS=Licania heteromorpha GN=psaA PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.100e-73
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAP AT PGATASTSLTWGGSDLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPDATAPGATASTSLTWGGSDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. ExPASy Swiss-Prot
Match: PSAA_SPIOL (Photosystem I P700 chlorophyll a apoprotein A1 OS=Spinacia oleracea GN=psaA PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.800e-75
Identity = 138/147 (93.88%), Postives = 141/147 (95.92%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSAT PGATASTSLTWGGSDLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYN+IS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNSISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. ExPASy Swiss-Prot
Match: PSAA_CALFG (Photosystem I P700 chlorophyll a apoprotein A1 OS=Calycanthus floridus var. glaucus GN=psaA PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 6.200e-75
Identity = 136/147 (92.52%), Postives = 140/147 (95.24%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQP+FAQW+QNTHALAPSAT PGATASTSLTWGG DLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPIFAQWVQNTHALAPSATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. ExPASy Swiss-Prot
Match: PSAA_EUCGG (Photosystem I P700 chlorophyll a apoprotein A1 OS=Eucalyptus globulus subsp. globulus GN=psaA PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 8.100e-75
Identity = 137/147 (93.20%), Postives = 140/147 (95.24%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAP+AT PGATASTSLTWGG DLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPAATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. ExPASy Swiss-Prot
Match: PSAA_DAUCA (Photosystem I P700 chlorophyll a apoprotein A1 OS=Daucus carota GN=psaA PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.100e-74
Identity = 137/147 (93.20%), Postives = 139/147 (94.56%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSAT PGAT STSLTWGG DLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATTSTSLTWGGGDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. ExPASy Swiss-Prot
Match: PSAA_NICSY (Photosystem I P700 chlorophyll a apoprotein A1 OS=Nicotiana sylvestris GN=psaA PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.100e-74
Identity = 137/147 (93.20%), Postives = 139/147 (94.56%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAP AT PGATASTSLTWGG DLVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPGATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. TAIR (Arabidopsis)
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 275.8 bits (704), Expect = 1.900e-74
Identity = 134/147 (91.16%), Postives = 137/147 (93.20%), Query Frame = 1 

		  

Query: 23  LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATTPGATASTSLTWGGSDLVAVGGKVAL 82
           LGRPQDMFSDTAIQLQPVFAQWIQNTHALAP  T PG TASTSLTWGG +LVAVGGKVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPGVTAPGETASTSLTWGGGELVAVGGKVAL 521

Query: 83  LPIPLGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 142
           LPIPLGTADFLVHHIHAFTI+VT+LILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 143 CQVSAWDHVCLGLFWMYNAISDGILGF 170
           CQVSAWDHV LGLFWMYNAIS  I  F
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHF 608
[Close]
BLAST of Spo05412.1 vs. TAIR (Arabidopsis)
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 119.8 bits (299), Expect = 1.800e-27
Identity = 63/136 (46.32%), Postives = 81/136 (59.56%), Query Frame = 1 

		  

Query: 35  IQLQPVFAQWIQNTHA--------LAPSATTPGATASTSLTWGGSDLVAVGGKVALLPIP 94
           I ++P+FAQWIQ+ H         L  S + P   A  S+ W    L A+      L + 
Sbjct: 453 ILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSI-WLPGWLNAINENSNSLFLT 512

Query: 95  LGTADFLVHHIHAFTIYVTILILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVS 154
           +G  DFLVHH  A  ++ T LIL+KG L AR S+L+PDK + G+ FPCDGPGRGGTC +S
Sbjct: 513 IGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDIS 572

Query: 155 AWDHVCLGLFWMYNAI 163
           AWD   L +FWM N I
Sbjct: 573 AWDAFYLAVFWMLNTI 587
The following BLAST results are available for this feature:
BLAST of Spo05412.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|11497525|ref|NP_054933.1|4.5e-7393.8photosystem I P700 chlorophyll... [more]
gi|630716135|ref|YP_009027970.1|5.8e-7393.8photosystem I P700 chlorophyll... [more]
gi|456330990|ref|YP_007476351.1|5.8e-7393.2PsaA (chloroplast) [Trithuria ... [more]
gi|749404156|gb|AJF20616.1|5.8e-7393.8PsaA [Chrysanthemum indicum][more]
gi|748994210|gb|AJE74609.1|5.8e-7393.8photosystem I P700 chlorophyll... [more]
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BLAST of Spo05412.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A023T0U9_9ROSI4.1e-7393.8Photosystem I P700 chlorophyll... [more]
A0A023T1I4_9ROSI4.1e-7393.8Photosystem I P700 chlorophyll... [more]
A0A0A0PJZ8_9ASTR4.1e-7393.8Photosystem I P700 chlorophyll... [more]
M1FKX4_9ASTR4.1e-7393.8Photosystem I P700 chlorophyll... [more]
A0A023T0K8_9ROSI4.1e-7393.8Photosystem I P700 chlorophyll... [more]
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BLAST of Spo05412.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PSAA_SPIOL2.8e-7593.8Photosystem I P700 chlorophyll... [more]
PSAA_CALFG6.2e-7592.5Photosystem I P700 chlorophyll... [more]
PSAA_EUCGG8.1e-7593.2Photosystem I P700 chlorophyll... [more]
PSAA_DAUCA1.1e-7493.2Photosystem I P700 chlorophyll... [more]
PSAA_NICSY1.1e-7493.2Photosystem I P700 chlorophyll... [more]
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BLAST of Spo05412.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
ATCG00350.11.9e-7491.1Photosystem I, PsaA/PsaB prote... [more]
ATCG00340.11.8e-2746.3Photosystem I, PsaA/PsaB prote... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001280Photosystem I PsaA/PsaBPRINTSPR00257PHOTSYSPSAABcoord: 123..143
score: 1.0E-25coord: 150..171
score: 1.0E-25coord: 92..110
score: 1.0
IPR001280Photosystem I PsaA/PsaBGENE3D1.20.1130.10coord: 23..163
score: 1.1
IPR001280Photosystem I PsaA/PsaBPFAMPF00223PsaA_PsaBcoord: 22..166
score: 2.2
IPR001280Photosystem I PsaA/PsaBunknownSSF81558Photosystem I subunits PsaA/PsaBcoord: 23..169
score: 8.5
IPR020586Photosystem I PsaA/PsaB, conserved sitePROSITEPS00419PHOTOSYSTEM_I_PSAABcoord: 134..143
scor
NoneNo IPR availablePANTHERPTHR30128OUTER MEMBRANE PROTEIN, OMPA-RELATEDcoord: 23..161
score: 6.1
NoneNo IPR availablePANTHERPTHR30128:SF8PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1coord: 23..161
score: 6.1

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0015979 photosynthesis
biological_process GO:0009772 photosynthetic electron transport in photosystem II
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0018298 protein-chromophore linkage
cellular_component GO:0009522 photosystem I
cellular_component GO:0009579 thylakoid
cellular_component GO:0030076 light-harvesting complex
cellular_component GO:0005840 ribosome
cellular_component GO:0009507 chloroplast
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0005739 mitochondrion
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function GO:0046872 metal ion binding
RNA-Seq Expression