Spo05431 (gene)

Overview
NameSpo05431
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00408 : 359072 .. 360656 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCGCTGAGGTATGTATATTTTGCAAGAGGAATCTATTGATTGTTCGGCTAAAATACAAATCTCCCTATTGGTGCCGAACTTTTTATCGTGAAACAGGTTTCCCCTAAATTTATTGTCTTTTTCTTGGTATTCAGGTTCAAGTTTTGAGCCATACAACATTCTTGGTTTGGAGCCTGGAGCTTCTGATTCAGAAATTAAAAAGGCTTATAGGAAACTTTCTATTCTGTACCATCATGACAAAAACCCAGATCCTGGTAGATGTTGTTTGTGCAGATGCTACTTTATTTTTTCTTGTTGATTTATATGCCTACCTATTCCTAATGTGCTGGTGTATTTTGTTTTCTTTGCAGAGGTTATCAAGTATTTTGTGGAGTTTATTTCAAAAGCTTACCCGGCCTTGACTGATCCCGTTTCCCGCGAGAATTATGAAAAGTATGGTCATCTAGATGGCATACGGATACATTCTCTTATCCTAACACTTATAAAGCCATGAACTTTGTTTACTATTCACGCAATAGTTAGATTACTGAAATACCCCCACAATCCTTCATGGTTTTTTTTTGTCTTTTCCTTAACAATAGTGTGATTACAATTTTAGCCTCGTTTGTGTTAGGCTGCCACGTGCTCTTATGCTTCCCTGAATCCCTGGTCTCTATGAGCTACTGAGCTCCTCTCCCTTTTTTTTCTTTTTCTTTTTCTTTTGACCTTCTCTCCTTTTTCTGATATTTTCTCCCCGTTCATTCGACTCCAGAGTCCTAGCTTCTTTTTCTTTACTTTCTTCTCCCTTCCATTCGAGCCTGCTCCATCTCTCCTCCCCCTCTGTATTCCTGTTCGTTTTCCTGTTCGTGTTTCCCTTCTCCTCTCTCTCCAACATCATTAACACTCCCTAACTATTCAATTTGTGTTGTTGATTTTTACATTTCTCATCTTCCCCGGGTTAGAATGAGGTGAGTTTCAATCTCAATTTGAATCAGGCTTTGATTCGATTTTTTTGGAAAAATTTGATTTCATAACAGCTATTTTGTATTAATCTCTTCCGTTGATTGTATCCCTTCTCCTGGGTCAGTTTGAGGGATTTTGCTGTGAATGAAGAAGCGATGAAGCGGTTGAATGCGCCTCTTGCTTAGAGATCGGTGTGAGGGGTTTGCTAAGGTAATTGTTAATTAATTTTTTTTAATTTGTTTTGATTTGTTAAATTGATTGAAGTTTCATGAGATTTGATCGTTAATTGTATTAATTTCTATCGGTTTTTGACATCAGTGTTCTTCAGATGAATGTCCATTCTCCTAATGAAGAGGTTTTTTTACGTTTCTCTAATTTTCTAGGTTTTTTTCATGATTGAATTTTGATGTGTGTTACCTTCAACTTGTGGGGGTGAGTTACAATTTGAGAATTTCTAGAAGAGATGATAACTCCATTGTTGGATTCGCCACAATTGAGGTCACTTTTGCTTTTGTTTCTTCTGATGGTTGAGGATTTTCGCTGAAATTGATGACAATTTTGGTAAAAGTAAGAGGGTTGATTGCTTTTTCTTGCTTTCTTTGCAGGGCAATACTGTATATGGTGCATTGCGGGCATTAG

mRNA sequence

ATGAGCGCTGAGCTTCTTTTTCTTTACTTTCTTCTCCCTTCCATTCGAGCCTGCTCCATCTCTCCTCCCCCTCTGTATTCCTGTTCGTTTTCCTGTTCGTGTTTCCCTTCTCCTCTCTCTCCAACATCATTAACACTCCCTAACTATTCAATTTGTGTTGTTGATTTTTACATTTCTCATCTTCCCCGGGTTAGAATGAGAAGCGATGAAGCGGTTGAATGCGCCTCTTGCTTAGAGATCGGTGTGAGGGGTTTGCTAAGGGCAATACTGTATATGGTGCATTGCGGGCATTAG

Coding sequence (CDS)

ATGAGCGCTGAGCTTCTTTTTCTTTACTTTCTTCTCCCTTCCATTCGAGCCTGCTCCATCTCTCCTCCCCCTCTGTATTCCTGTTCGTTTTCCTGTTCGTGTTTCCCTTCTCCTCTCTCTCCAACATCATTAACACTCCCTAACTATTCAATTTGTGTTGTTGATTTTTACATTTCTCATCTTCCCCGGGTTAGAATGAGAAGCGATGAAGCGGTTGAATGCGCCTCTTGCTTAGAGATCGGTGTGAGGGGTTTGCTAAGGGCAATACTGTATATGGTGCATTGCGGGCATTAG

Protein sequence

MSAELLFLYFLLPSIRACSISPPPLYSCSFSCSCFPSPLSPTSLTLPNYSICVVDFYISHLPRVRMRSDEAVECASCLEIGVRGLLRAILYMVHCGH
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo05431.1Spo05431.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo05431.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo05431.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo05431.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo05431.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0016310 phosphorylation
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0032259 methylation
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0007033 vacuole organization
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0007030 Golgi organization
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016049 cell growth
biological_process GO:0015979 photosynthesis
biological_process GO:0009058 biosynthetic process
biological_process GO:0016311 dephosphorylation
cellular_component GO:0005777 peroxisome
cellular_component GO:0005829 cytosol
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009523 photosystem II
cellular_component GO:0009507 chloroplast
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0008531 riboflavin kinase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0047617 acyl-CoA hydrolase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008967 phosphoglycolate phosphatase activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003919 FMN adenylyltransferase activity
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0005198 structural molecule activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo146780.79Barchart | Table
Spo208690.79Barchart | Table
Spo130290.78Barchart | Table
Spo228110.77Barchart | Table
Spo280580.76Barchart | Table
Spo205440.76Barchart | Table
Spo088500.76Barchart | Table
Spo270810.76Barchart | Table
Spo029320.76Barchart | Table
Spo012610.75Barchart | Table
Spo050730.74Barchart | Table
Spo015790.74Barchart | Table
Spo251590.74Barchart | Table
Spo156390.73Barchart | Table
Spo037570.73Barchart | Table
Spo243430.73Barchart | Table
Spo142250.72Barchart | Table
Spo119610.72Barchart | Table
Spo261170.72Barchart | Table
Spo175780.72Barchart | Table
Spo060040.72Barchart | Table
Spo062930.72Barchart | Table
Spo092900.72Barchart | Table
Spo248570.72Barchart | Table
Spo149440.71Barchart | Table
Spo087130.71Barchart | Table
Spo260450.71Barchart | Table
Spo131840.71Barchart | Table
Spo188280.70Barchart | Table
Spo171610.70Barchart | Table
Spo252300.70Barchart | Table
Spo140870.70Barchart | Table
Spo143420.70Barchart | Table
Spo236750.69Barchart | Table
Spo235490.69Barchart | Table
Spo231480.69Barchart | Table
Spo019340.69Barchart | Table
Spo254830.69Barchart | Table
Spo051350.69Barchart | Table
Spo227600.69Barchart | Table
Spo258760.69Barchart | Table
Spo187820.69Barchart | Table
Spo267890.69Barchart | Table
Spo132020.69Barchart | Table
Spo133730.69Barchart | Table
Spo201520.69Barchart | Table
Spo135180.69Barchart | Table
Spo160790.69Barchart | Table
Spo025730.69Barchart | Table
Spo198700.69Barchart | Table
Spo156300.69Barchart | Table
Spo240460.69Barchart | Table
Spo018580.69Barchart | Table
Spo251070.68Barchart | Table
Spo004980.68Barchart | Table
Spo054020.68Barchart | Table
Spo057280.68Barchart | Table
Spo057310.68Barchart | Table
Spo096050.68Barchart | Table
Spo103160.68Barchart | Table
Spo119460.68Barchart | Table
Spo131930.68Barchart | Table
Spo144160.68Barchart | Table
Spo185020.68Barchart | Table
Spo185750.68Barchart | Table
Spo210670.68Barchart | Table
Spo211550.68Barchart | Table
Spo239070.68Barchart | Table
Spo206950.67Barchart | Table
Spo093350.67Barchart | Table
Spo123020.67Barchart | Table
Spo014260.67Barchart | Table
Spo248080.67Barchart | Table
Spo069720.67Barchart | Table
Spo172500.67Barchart | Table
Spo225290.67Barchart | Table
Spo158810.67Barchart | Table
Spo112130.66Barchart | Table
Spo136140.66Barchart | Table
Spo210460.66Barchart | Table
Spo001140.66Barchart | Table
Spo069490.66Barchart | Table
Spo253470.66Barchart | Table
Spo069190.66Barchart | Table
Spo271020.66Barchart | Table
Spo059900.66Barchart | Table
Spo050930.66Barchart | Table
Spo034380.66Barchart | Table
Spo031950.66Barchart | Table
Spo169960.66Barchart | Table
Spo117330.66Barchart | Table
Spo113170.66Barchart | Table
Spo089690.65Barchart | Table
Spo201870.65Barchart | Table
Spo206860.65Barchart | Table
Spo134900.65Barchart | Table
Spo128940.65Barchart | Table
Spo003440.65Barchart | Table
Spo149420.65Barchart | Table
Spo246130.65Barchart | Table
Spo253900.65Barchart | Table
Spo021070.65Barchart | Table