Spo05438 (gene)

Overview
NameSpo05438
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRibosomal protein L34e superfamily protein, putative
LocationSpoScf_00408 : 286267 .. 286944 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATATCACAATTCTTCAATTGATCAATCTACTAGAATGACTGTTTCGATGAGTATTACTGACCCTTATCTGAAACCAAAACAAATTAATCAAATTTCGAAAAATCGAAAAATGCCCAATTCATCAAATCATCAGATTTCGTCGAGTTGTTGTGAATCTCGTTTAGCTGTTCTTGATATGGTTATGTTGATATCTGCAATTGGTGCAATTGGGTATTTGGTGTTTCCCTATGTTAGTTTTACATACATGAAAGTGGCAGAGATTGGTGGTTTAGTTTGCTCGACTCTGAGGGATGAAATATATGAGAATCCGGTTATTTACGGATCGTTGGGGTTTAGTATGGTATGTGTAGGGATGGCTGCTTGGGGGATTGTGATGTGTACAACTCGAAAGTGTGGCAATCCAAGTTGCCGAGGTCTTTGGAAGGCGGCTGAGTTCGACATACAGCTTGAGACGGAGGAATGTGTAAAGAACTCGAATTCAATGGTAAAGGATGGTGTTAAGAAGGGGTTATTCGAGTTGCCGCGTGATCATCATCGTGAACTGGAGGCAGAGCTTAAGAAAATTGCACCCCCAAATGGAAGGGCGGTTCTCGTGTTTCGTGCTAGGTGTGGATGTTCTGTTGGTAGGATGGAGGTTCCAGGTCAGAGGAAGCCTCGAAAGATCAAGAAGTAG

mRNA sequence

ATGGTATATCACAATTCTTCAATTGATCAATCTACTAGAATGACTGTTTCGATGAGTATTACTGACCCTTATCTGAAACCAAAACAAATTAATCAAATTTCGAAAAATCGAAAAATGCCCAATTCATCAAATCATCAGATTTCGTCGAGTTGTTGTGAATCTCGTTTAGCTGTTCTTGATATGGTTATGTTGATATCTGCAATTGGTGCAATTGGGTATTTGGTGTTTCCCTATGTTAGTTTTACATACATGAAAGTGGCAGAGATTGGTGGTTTAGTTTGCTCGACTCTGAGGGATGAAATATATGAGAATCCGGTTATTTACGGATCGTTGGGGTTTAGTATGGTATGTGTAGGGATGGCTGCTTGGGGGATTGTGATGTGTACAACTCGAAAGTGTGGCAATCCAAGTTGCCGAGGTCTTTGGAAGGCGGCTGAGTTCGACATACAGCTTGAGACGGAGGAATGTGTAAAGAACTCGAATTCAATGGTAAAGGATGGTGTTAAGAAGGGGTTATTCGAGTTGCCGCGTGATCATCATCGTGAACTGGAGGCAGAGCTTAAGAAAATTGCACCCCCAAATGGAAGGGCGGTTCTCGTGTTTCGTGCTAGGTGTGGATGTTCTGTTGGTAGGATGGAGGTTCCAGGTCAGAGGAAGCCTCGAAAGATCAAGAAGTAG

Coding sequence (CDS)

ATGGTATATCACAATTCTTCAATTGATCAATCTACTAGAATGACTGTTTCGATGAGTATTACTGACCCTTATCTGAAACCAAAACAAATTAATCAAATTTCGAAAAATCGAAAAATGCCCAATTCATCAAATCATCAGATTTCGTCGAGTTGTTGTGAATCTCGTTTAGCTGTTCTTGATATGGTTATGTTGATATCTGCAATTGGTGCAATTGGGTATTTGGTGTTTCCCTATGTTAGTTTTACATACATGAAAGTGGCAGAGATTGGTGGTTTAGTTTGCTCGACTCTGAGGGATGAAATATATGAGAATCCGGTTATTTACGGATCGTTGGGGTTTAGTATGGTATGTGTAGGGATGGCTGCTTGGGGGATTGTGATGTGTACAACTCGAAAGTGTGGCAATCCAAGTTGCCGAGGTCTTTGGAAGGCGGCTGAGTTCGACATACAGCTTGAGACGGAGGAATGTGTAAAGAACTCGAATTCAATGGTAAAGGATGGTGTTAAGAAGGGGTTATTCGAGTTGCCGCGTGATCATCATCGTGAACTGGAGGCAGAGCTTAAGAAAATTGCACCCCCAAATGGAAGGGCGGTTCTCGTGTTTCGTGCTAGGTGTGGATGTTCTGTTGGTAGGATGGAGGTTCCAGGTCAGAGGAAGCCTCGAAAGATCAAGAAGTAG

Protein sequence

MVYHNSSIDQSTRMTVSMSITDPYLKPKQINQISKNRKMPNSSNHQISSSCCESRLAVLDMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLRDEIYENPVIYGSLGFSMVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVKNSNSMVKDGVKKGLFELPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQRKPRKIKK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo05438.1Spo05438.1mRNA


Homology
[Close]
BLAST of Spo05438.1 vs. NCBI nr
Match: gi|731363111|ref|XP_010693251.1| (PREDICTED: uncharacterized protein At5g19025 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 387.5 bits (994), Expect = 1.600e-104
Identity = 189/228 (82.89%), Postives = 208/228 (91.23%), Query Frame = 1 

		  

Query: 1   MVYHNS---SIDQSTRMTVSMSITDPYLKPKQINQISKNRKMPNSSNHQISSSCCESRLA 60
           MVYHN+   SI+QS  MTVSMS+++P LK KQINQI KNR++PNSSNHQ+SSSCCESRLA
Sbjct: 1   MVYHNTVCKSIEQSNTMTVSMSLSEPDLKSKQINQIQKNRRLPNSSNHQVSSSCCESRLA 60

Query: 61  VLDMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLRDEIYENPVIYGSLGFSMVC 120
           VLD++MLI+AIGAIG+L++PYVS+ Y+KVAEIG LVC  L+DEIYENP+IYGSLG SMVC
Sbjct: 61  VLDVIMLIAAIGAIGFLLYPYVSYAYVKVAEIGSLVCCILKDEIYENPMIYGSLGLSMVC 120

Query: 121 VGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVKNSNSMVKDGVKKGLFELPR 180
           V MAAW IVMCTTRKC NPSCRGLWKAAEFDIQLETEECVKNSNS  KDGVK+GLFELPR
Sbjct: 121 VAMAAWAIVMCTTRKCANPSCRGLWKAAEFDIQLETEECVKNSNSPSKDGVKRGLFELPR 180

Query: 181 DHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQRKPRKIKK 226
           DHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPG RK RKIKK
Sbjct: 181 DHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGPRKARKIKK 228
[Close]
BLAST of Spo05438.1 vs. NCBI nr
Match: gi|902145326|gb|KNA04967.1| (hypothetical protein SOVF_194770 [Spinacia oleracea])

HSP 1 Score: 384.0 bits (985), Expect = 1.800e-103
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

		  

Query: 39  MPNSSNHQISSSCCESRLAVLDMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLR 98
           MPNSSNHQISSSCCESRLAVLDMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLR
Sbjct: 1   MPNSSNHQISSSCCESRLAVLDMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLR 60

Query: 99  DEIYENPVIYGSLGFSMVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVK 158
           DEIYENPVIYGSLGFSMVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVK
Sbjct: 61  DEIYENPVIYGSLGFSMVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVK 120

Query: 159 NSNSMVKDGVKKGLFELPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQR 218
           NSNSMVKDGVKKGLFELPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQR
Sbjct: 121 NSNSMVKDGVKKGLFELPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQR 180

Query: 219 KPRKIKK 226
           KPRKIKK
Sbjct: 181 KPRKIKK 187
[Close]
BLAST of Spo05438.1 vs. NCBI nr
Match: gi|870846751|gb|KMS99247.1| (hypothetical protein BVRB_2g046840 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 374.4 bits (960), Expect = 1.400e-100
Identity = 180/212 (84.91%), Postives = 197/212 (92.92%), Query Frame = 1 

		  

Query: 14  MTVSMSITDPYLKPKQINQISKNRKMPNSSNHQISSSCCESRLAVLDMVMLISAIGAIGY 73
           MTVSMS+++P LK KQINQI KNR++PNSSNHQ+SSSCCESRLAVLD++MLI+AIGAIG+
Sbjct: 1   MTVSMSLSEPDLKSKQINQIQKNRRLPNSSNHQVSSSCCESRLAVLDVIMLIAAIGAIGF 60

Query: 74  LVFPYVSFTYMKVAEIGGLVCSTLRDEIYENPVIYGSLGFSMVCVGMAAWGIVMCTTRKC 133
           L++PYVS+ Y+KVAEIG LVC  L+DEIYENP+IYGSLG SMVCV MAAW IVMCTTRKC
Sbjct: 61  LLYPYVSYAYVKVAEIGSLVCCILKDEIYENPMIYGSLGLSMVCVAMAAWAIVMCTTRKC 120

Query: 134 GNPSCRGLWKAAEFDIQLETEECVKNSNSMVKDGVKKGLFELPRDHHRELEAELKKIAPP 193
            NPSCRGLWKAAEFDIQLETEECVKNSNS  KDGVK+GLFELPRDHHRELEAELKKIAPP
Sbjct: 121 ANPSCRGLWKAAEFDIQLETEECVKNSNSPSKDGVKRGLFELPRDHHRELEAELKKIAPP 180

Query: 194 NGRAVLVFRARCGCSVGRMEVPGQRKPRKIKK 226
           NGRAVLVFRARCGCSVGRMEVPG RK RKIKK
Sbjct: 181 NGRAVLVFRARCGCSVGRMEVPGPRKARKIKK 212
[Close]
BLAST of Spo05438.1 vs. NCBI nr
Match: gi|645249493|ref|XP_008230777.1| (PREDICTED: uncharacterized protein At5g19025 [Prunus mume])

HSP 1 Score: 293.1 bits (749), Expect = 4.100e-76
Identity = 145/231 (62.77%), Postives = 176/231 (76.19%), Query Frame = 1 

		  

Query: 1   MVYHNSSI------DQSTRMTVSMSITDPYLKPKQINQISKNRKMPNSSNHQISSSCCES 60
           MVY +SSI      DQ T M  SMS+TDP  K KQ N + ++RK+PNS N     +C  S
Sbjct: 1   MVYFHSSISVCNSVDQPTPMADSMSLTDPGAKSKQTNHVHRSRKIPNSPNCSKIPACHRS 60

Query: 61  RLAVLDMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLRDEIYENPVIYGSLGFS 120
           R A +D+V+ I+ +GA GYL+FPYV    +K  EI G++   LR+EI   P++YG +G S
Sbjct: 61  RSAAIDVVLFIAVVGAFGYLLFPYVKIISVKTIEIVGIIMYVLREEISHAPLVYGCMGLS 120

Query: 121 MVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVKNSNSMVKDGVKKGLFE 180
           + C  +AAW ++ CT+RKCGNP+C+GL KAAEFDIQLETEECVKNS SM KDGVKKGLFE
Sbjct: 121 ICCAALAAWALLACTSRKCGNPNCKGLRKAAEFDIQLETEECVKNSASMFKDGVKKGLFE 180

Query: 181 LPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQRKPRKIKK 226
           LPRDHHRELEAELKK+APPNGRAVLVFRARCGCSVGR+EVPG +K +KIKK
Sbjct: 181 LPRDHHRELEAELKKMAPPNGRAVLVFRARCGCSVGRLEVPGPKKLKKIKK 231
[Close]
BLAST of Spo05438.1 vs. NCBI nr
Match: gi|595942538|ref|XP_007215917.1| (hypothetical protein PRUPE_ppa010896mg [Prunus persica])

HSP 1 Score: 292.7 bits (748), Expect = 5.300e-76
Identity = 144/231 (62.34%), Postives = 176/231 (76.19%), Query Frame = 1 

		  

Query: 1   MVYHNSSI------DQSTRMTVSMSITDPYLKPKQINQISKNRKMPNSSNHQISSSCCES 60
           MVY +SSI      DQ T M  SMS+TDP  K KQ N + + RK+PNS N     +C  S
Sbjct: 1   MVYFHSSISVCNSVDQPTPMADSMSLTDPGAKSKQTNHVHRGRKIPNSPNCSKIPACHRS 60

Query: 61  RLAVLDMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLRDEIYENPVIYGSLGFS 120
           R A +D+V+ I+ +GA GYL+FPYV    +K  EI G++   LR+E+   P++YG +G S
Sbjct: 61  RSAAIDVVLFIAVVGAFGYLLFPYVKIISVKTIEIVGIIMYVLREEVSHAPLVYGCMGLS 120

Query: 121 MVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVKNSNSMVKDGVKKGLFE 180
           + C  +AAW ++ CT+RKCGNP+C+GL KAAEFDIQLETEECVKNS S+VKDGVKKGLFE
Sbjct: 121 ICCAALAAWALLACTSRKCGNPNCKGLRKAAEFDIQLETEECVKNSASVVKDGVKKGLFE 180

Query: 181 LPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQRKPRKIKK 226
           LPRDHHRELEAELKK+APPNGRAVLVFRARCGCSVGR+EVPG +K +KIKK
Sbjct: 181 LPRDHHRELEAELKKMAPPNGRAVLVFRARCGCSVGRLEVPGPKKLKKIKK 231
[Close]
BLAST of Spo05438.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCG6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_194770 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.200e-103
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

		  

Query: 39  MPNSSNHQISSSCCESRLAVLDMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLR 98
           MPNSSNHQISSSCCESRLAVLDMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLR
Sbjct: 1   MPNSSNHQISSSCCESRLAVLDMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLR 60

Query: 99  DEIYENPVIYGSLGFSMVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVK 158
           DEIYENPVIYGSLGFSMVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVK
Sbjct: 61  DEIYENPVIYGSLGFSMVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVK 120

Query: 159 NSNSMVKDGVKKGLFELPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQR 218
           NSNSMVKDGVKKGLFELPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQR
Sbjct: 121 NSNSMVKDGVKKGLFELPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQR 180

Query: 219 KPRKIKK 226
           KPRKIKK
Sbjct: 181 KPRKIKK 187
[Close]
BLAST of Spo05438.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BGR5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g046840 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 9.700e-101
Identity = 180/212 (84.91%), Postives = 197/212 (92.92%), Query Frame = 1 

		  

Query: 14  MTVSMSITDPYLKPKQINQISKNRKMPNSSNHQISSSCCESRLAVLDMVMLISAIGAIGY 73
           MTVSMS+++P LK KQINQI KNR++PNSSNHQ+SSSCCESRLAVLD++MLI+AIGAIG+
Sbjct: 1   MTVSMSLSEPDLKSKQINQIQKNRRLPNSSNHQVSSSCCESRLAVLDVIMLIAAIGAIGF 60

Query: 74  LVFPYVSFTYMKVAEIGGLVCSTLRDEIYENPVIYGSLGFSMVCVGMAAWGIVMCTTRKC 133
           L++PYVS+ Y+KVAEIG LVC  L+DEIYENP+IYGSLG SMVCV MAAW IVMCTTRKC
Sbjct: 61  LLYPYVSYAYVKVAEIGSLVCCILKDEIYENPMIYGSLGLSMVCVAMAAWAIVMCTTRKC 120

Query: 134 GNPSCRGLWKAAEFDIQLETEECVKNSNSMVKDGVKKGLFELPRDHHRELEAELKKIAPP 193
            NPSCRGLWKAAEFDIQLETEECVKNSNS  KDGVK+GLFELPRDHHRELEAELKKIAPP
Sbjct: 121 ANPSCRGLWKAAEFDIQLETEECVKNSNSPSKDGVKRGLFELPRDHHRELEAELKKIAPP 180

Query: 194 NGRAVLVFRARCGCSVGRMEVPGQRKPRKIKK 226
           NGRAVLVFRARCGCSVGRMEVPG RK RKIKK
Sbjct: 181 NGRAVLVFRARCGCSVGRMEVPGPRKARKIKK 212
[Close]
BLAST of Spo05438.1 vs. UniProtKB/TrEMBL
Match: M5WV55_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010896mg PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.700e-76
Identity = 144/231 (62.34%), Postives = 176/231 (76.19%), Query Frame = 1 

		  

Query: 1   MVYHNSSI------DQSTRMTVSMSITDPYLKPKQINQISKNRKMPNSSNHQISSSCCES 60
           MVY +SSI      DQ T M  SMS+TDP  K KQ N + + RK+PNS N     +C  S
Sbjct: 1   MVYFHSSISVCNSVDQPTPMADSMSLTDPGAKSKQTNHVHRGRKIPNSPNCSKIPACHRS 60

Query: 61  RLAVLDMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLRDEIYENPVIYGSLGFS 120
           R A +D+V+ I+ +GA GYL+FPYV    +K  EI G++   LR+E+   P++YG +G S
Sbjct: 61  RSAAIDVVLFIAVVGAFGYLLFPYVKIISVKTIEIVGIIMYVLREEVSHAPLVYGCMGLS 120

Query: 121 MVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVKNSNSMVKDGVKKGLFE 180
           + C  +AAW ++ CT+RKCGNP+C+GL KAAEFDIQLETEECVKNS S+VKDGVKKGLFE
Sbjct: 121 ICCAALAAWALLACTSRKCGNPNCKGLRKAAEFDIQLETEECVKNSASVVKDGVKKGLFE 180

Query: 181 LPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQRKPRKIKK 226
           LPRDHHRELEAELKK+APPNGRAVLVFRARCGCSVGR+EVPG +K +KIKK
Sbjct: 181 LPRDHHRELEAELKKMAPPNGRAVLVFRARCGCSVGRLEVPGPKKLKKIKK 231
[Close]
BLAST of Spo05438.1 vs. UniProtKB/TrEMBL
Match: F6H5U4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0108g00970 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.200e-70
Identity = 137/231 (59.31%), Postives = 171/231 (74.03%), Query Frame = 1 

		  

Query: 1   MVYHNSSI------DQSTRMTVSMSITDPYLKPKQINQISKNRKMPNSSNHQISSSCCES 60
           MVY +SSI      DQS  M  S++  +   K +Q N   +NRK PNS N      C  S
Sbjct: 1   MVYFHSSISVCNSVDQSGIMASSLNSGEACSKSRQNNHACRNRKTPNSPNSAKIPDCSRS 60

Query: 61  RLAVLDMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLRDEIYENPVIYGSLGFS 120
           R A++D+VMLI+ +GA G+L+FPYV     +  ++ G +    ++E+   P++YGSLG S
Sbjct: 61  RSAMIDLVMLIAVVGACGFLLFPYVKVVANEFVKLVGAIIYLTKEEVSRAPMVYGSLGVS 120

Query: 121 MVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVKNSNSMVKDGVKKGLFE 180
           ++   +A WGI++CT+RKCG P+CRGL KAAEFDIQLETEECVKNS+S+VKDG+KKGLFE
Sbjct: 121 VLFAAIAVWGILICTSRKCGKPNCRGLRKAAEFDIQLETEECVKNSSSLVKDGLKKGLFE 180

Query: 181 LPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQRKPRKIKK 226
           LPRDHHRELEAELKK+APPNGRAVLVFRARCGCSVGRMEVPG +K RK KK
Sbjct: 181 LPRDHHRELEAELKKMAPPNGRAVLVFRARCGCSVGRMEVPGPKKLRKFKK 231
[Close]
BLAST of Spo05438.1 vs. UniProtKB/TrEMBL
Match: B9H0C0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s12110g PE=4 SV=2)

HSP 1 Score: 258.8 bits (660), Expect = 6.000e-66
Identity = 131/235 (55.74%), Postives = 169/235 (71.91%), Query Frame = 1 

		  

Query: 1   MVYHNSSI------DQSTRMTVSMSITDPYLKPKQI---NQISKNRKMPNSSNHQISSSC 60
           MVY +SSI      DQS+  +++ S+      PK     N + KNRK  N SN +    C
Sbjct: 1   MVYFHSSISVCNSFDQSSTASMANSVNSSEFNPKSRHNNNHVHKNRKTVNGSNCKTIPVC 60

Query: 61  CESRLAVLDMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLRDEIYENPVIYGSL 120
             S+ AV+D+V+LI+ IGA G+L+FPY+    +   E    +   +++E+  NPVIYGS+
Sbjct: 61  DRSQSAVIDVVILIAVIGACGFLLFPYIRIVTLGFIEFVAAIHYVVKEEVMRNPVIYGSI 120

Query: 121 GFSMVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVKNSN-SMVKDGVKK 180
           G S +C  + AW +++C  RKCGNP+C+GL KAAEFDIQLETEECVKNSN ++VKDG+K+
Sbjct: 121 GISSLCAAIVAWIVILCAARKCGNPNCKGLRKAAEFDIQLETEECVKNSNGTLVKDGLKR 180

Query: 181 GLFELPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQRKPRKIKK 226
           GLFELP DHHRELEAELKK+AP NGRAVLVFRARCGCSVGR+EVPG +K +KIKK
Sbjct: 181 GLFELPHDHHRELEAELKKMAPTNGRAVLVFRARCGCSVGRLEVPGPKKTKKIKK 235
[Close]
BLAST of Spo05438.1 vs. ExPASy Swiss-Prot
Match: Y5902_ARATH (Uncharacterized protein At5g19025 OS=Arabidopsis thaliana GN=At5g19025 PE=2 SV=3)

HSP 1 Score: 95.5 bits (236), Expect = 7.800e-19
Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 1 

		  

Query: 110 SLGFSMVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVKNSNSMVKDGVK 169
           S+ F  +C G  +        RKC NP C+G+ KA EFD+QL+TEECVK+ +    D + 
Sbjct: 138 SIAFLDLCCGSRS--------RKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLP 197

Query: 170 -KGLFELPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQRKPRKIKK 226
            KG  E   D+   L AEL+K+AP NGRAVL+FR++CGC + ++E  G ++ R+ KK
Sbjct: 198 WKGGSESNPDYEC-LRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKK 245
[Close]
BLAST of Spo05438.1 vs. TAIR (Arabidopsis)
Match: AT5G15260.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 217.6 bits (553), Expect = 7.700e-57
Identity = 122/235 (51.91%), Postives = 159/235 (67.66%), Query Frame = 1 

		  

Query: 1   MVYHNSSIDQSTRMTVSMSITDPYLKPKQINQISKNRKMPNSSNHQISSSCCE-SRLAVL 60
           MVY  +SI    +  +     D +   KQ    S NRK  +SS     S CC+ SR A +
Sbjct: 1   MVYFQNSISLVDQSPIMAHSPDFHHHSKQSRTSSSNRKSSSSSCSSNFSVCCDGSRSAAI 60

Query: 61  DMVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLRDEIYEN--PVIYGSLGFSMVC 120
           D+V+LI+ I + G+L+FPY+ F  +K  EI   +   +++EI  N  P++YG +  S+ C
Sbjct: 61  DVVILIAVITSSGFLIFPYIKFITIKSVEIFSELSCLVKEEILRNPDPIVYGLIALSISC 120

Query: 121 VGMAAWGIV--MCTTRKCGNPSCRGLWKA-AEFDIQLETEECVKNSNSMVKDGVKKGLFE 180
             ++AW IV  +C+  +CG P+C+GL KA AEFDIQLETE+CVK+SNS  K   KKGLFE
Sbjct: 121 TALSAWMIVILLCSRHRCGKPNCKGLRKANAEFDIQLETEDCVKSSNS-GKSVSKKGLFE 180

Query: 181 LPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQRK----PRKIKK 226
           LPRDHHRELEAELKK+APPNGRAVLVFRA+CGCSVGR+EVPG +K     RK+KK
Sbjct: 181 LPRDHHRELEAELKKMAPPNGRAVLVFRAKCGCSVGRLEVPGPKKQQLQQRKVKK 234
[Close]
BLAST of Spo05438.1 vs. TAIR (Arabidopsis)
Match: AT3G01170.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 200.3 bits (508), Expect = 1.300e-51
Identity = 113/227 (49.78%), Postives = 151/227 (66.52%), Query Frame = 1 

		  

Query: 1   MVYHNSSIDQSTRMTVSMSITDPYLKPKQINQISKNRKMPNSSNHQISSSCCESRLAVLD 60
           MVY +SSI  S   +V   I   +  PK  N  +K+   P  S   +   C  S+ A +D
Sbjct: 1   MVYLHSSI--SVCNSVDPMIMS-HSSPKSRNTRNKSSSSPTCSKFPV---CDGSQSAAID 60

Query: 61  MVMLISAIGAIGYLVFPYVSFTYMKVAEIGGLVCSTLRDEIYENPVIYGSLGFSMVCVGM 120
           +V+LI+ I A G+L FPYV    +K  E+   +   ++ EI +NP++YGSL  S+ C  +
Sbjct: 61  VVILIAVITACGFLFFPYVKLITLKSIEVFSDLSLLVKQEILQNPIVYGSLALSIFCAAI 120

Query: 121 AAWGIVM-CTTRKCGNPSCRGLWKAAEFDIQLETEECVKNSNSMVKDGVKKGLFELPRDH 180
           + W +++ CT ++CG P+C+GL KA EFDIQLETEECVK+S++      K+G+FELPR H
Sbjct: 121 STWLVILLCTMQRCGKPNCKGLRKAVEFDIQLETEECVKSSSN------KRGMFELPRVH 180

Query: 181 HRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQRK-PRKIKK 226
           HRELEAELKK+APPNGRAVLVFRARCGCSV R+ V G +K  RKIKK
Sbjct: 181 HRELEAELKKMAPPNGRAVLVFRARCGCSVRRLVVSGPKKQQRKIKK 215
[Close]
BLAST of Spo05438.1 vs. TAIR (Arabidopsis)
Match: AT3G06180.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 107.8 bits (268), Expect = 8.600e-24
Identity = 75/203 (36.95%), Postives = 111/203 (54.68%), Query Frame = 1 

		  

Query: 41  NSSNHQISSS--------CCESRLAVLDMVMLISAIGAIGYLVFPYVSFTYMKVA----- 100
           ++SNH  SSS        C  S  A LD+++LI  + +  +L+  Y S+ +   +     
Sbjct: 27  SASNHSSSSSSSSSSLHLCKHSPSATLDLLILILVLFSGAFLLSSYFSYLFHSFSLLSSH 86

Query: 101 --EIGGLVCSTLRDEIYENPVIYGSLGFSMVCVGMAAWGIVMC--TTRKCGNPSCRGLWK 160
              +  L+ S   D     P  Y    F++      A+  + C   +RKC NP C+GL K
Sbjct: 87  FPSLSSLIFSDDEDLSSIPPASY-FFAFAVFFAASIAFLDLCCGPRSRKCRNPKCKGLKK 146

Query: 161 AAEFDIQLETEECVKNSNSMVKDGVK-KGLFELPRDHHRELEAELKKIAPPNGRAVLVFR 220
           A EFD+QL+TEECVK+  +   D +  KG  E   D+   L AEL+++APPNGRAVL+FR
Sbjct: 147 AMEFDLQLQTEECVKSGATKEIDRLPWKGGSESNPDYEC-LRAELRRMAPPNGRAVLLFR 206

Query: 221 ARCGCSVGRMEVPGQRKPRKIKK 226
           +RCGC V ++E  G ++ R+ KK
Sbjct: 207 SRCGCPVAKLEGWGPKRGRRHKK 227
[Close]
BLAST of Spo05438.1 vs. TAIR (Arabidopsis)
Match: AT5G19025.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 95.5 bits (236), Expect = 4.400e-20
Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 1 

		  

Query: 110 SLGFSMVCVGMAAWGIVMCTTRKCGNPSCRGLWKAAEFDIQLETEECVKNSNSMVKDGVK 169
           S+ F  +C G  +        RKC NP C+G+ KA EFD+QL+TEECVK+ +    D + 
Sbjct: 138 SIAFLDLCCGSRS--------RKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLP 197

Query: 170 -KGLFELPRDHHRELEAELKKIAPPNGRAVLVFRARCGCSVGRMEVPGQRKPRKIKK 226
            KG  E   D+   L AEL+K+AP NGRAVL+FR++CGC + ++E  G ++ R+ KK
Sbjct: 198 WKGGSESNPDYEC-LRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKK 245
The following BLAST results are available for this feature:
BLAST of Spo05438.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731363111|ref|XP_010693251.1|1.6e-10482.8PREDICTED: uncharacterized pro... [more]
gi|902145326|gb|KNA04967.1|1.8e-103100.hypothetical protein SOVF_1947... [more]
gi|870846751|gb|KMS99247.1|1.4e-10084.9hypothetical protein BVRB_2g04... [more]
gi|645249493|ref|XP_008230777.1|4.1e-7662.7PREDICTED: uncharacterized pro... [more]
gi|595942538|ref|XP_007215917.1|5.3e-7662.3hypothetical protein PRUPE_ppa... [more]
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BLAST of Spo05438.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QCG6_SPIOL1.2e-103100.Uncharacterized protein OS=Spi... [more]
A0A0J8BGR5_BETVU9.7e-10184.9Uncharacterized protein OS=Bet... [more]
M5WV55_PRUPE3.7e-7662.3Uncharacterized protein OS=Pru... [more]
F6H5U4_VITVI5.2e-7059.3Putative uncharacterized prote... [more]
B9H0C0_POPTR6.0e-6655.7Uncharacterized protein OS=Pop... [more]
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BLAST of Spo05438.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5902_ARATH7.8e-1944.4Uncharacterized protein At5g19... [more]
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BLAST of Spo05438.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G15260.17.7e-5751.9Ribosomal protein L34e superfa... [more]
AT3G01170.11.3e-5149.7Ribosomal protein L34e superfa... [more]
AT3G06180.18.6e-2436.9Ribosomal protein L34e superfa... [more]
AT5G19025.14.4e-2044.4Ribosomal protein L34e superfa... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 178..225
score: 1.4E-91coord: 7..160
score: 1.4
NoneNo IPR availablePANTHERPTHR10759:SF8SUBFAMILY NOT NAMEDcoord: 7..160
score: 1.4E-91coord: 178..225
score: 1.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006580 ethanolamine metabolic process
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0006412 translation
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0008152 metabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0000785 chromatin
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016831 carboxy-lyase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0008886 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0043531 ADP binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo213780.76Barchart | Table
Spo011740.75Barchart | Table
Spo078130.74Barchart | Table
Spo200430.73Barchart | Table
Spo001350.73Barchart | Table
Spo043920.72Barchart | Table
Spo217910.71Barchart | Table
Spo172030.71Barchart | Table
Spo157070.71Barchart | Table
Spo068520.71Barchart | Table
Spo128890.71Barchart | Table
Spo217490.71Barchart | Table
Spo159900.70Barchart | Table
Spo060120.70Barchart | Table
Spo254440.70Barchart | Table
Spo102800.70Barchart | Table
Spo121080.70Barchart | Table
Spo126560.70Barchart | Table
Spo136430.70Barchart | Table
Spo047900.69Barchart | Table
Spo157030.69Barchart | Table
Spo267390.69Barchart | Table
Spo136470.69Barchart | Table
Spo207830.69Barchart | Table
Spo256110.68Barchart | Table
Spo063300.68Barchart | Table
Spo153350.68Barchart | Table
Spo043000.68Barchart | Table
Spo010870.67Barchart | Table
Spo145580.67Barchart | Table
Spo067830.67Barchart | Table
Spo213500.67Barchart | Table
Spo017960.67Barchart | Table
Spo101420.67Barchart | Table
Spo112010.67Barchart | Table
Spo201330.67Barchart | Table
Spo216170.67Barchart | Table
Spo126660.67Barchart | Table
Spo267900.67Barchart | Table
Spo212470.66Barchart | Table
Spo015330.66Barchart | Table
Spo024430.66Barchart | Table
Spo050200.66Barchart | Table
Spo082890.66Barchart | Table
Spo098210.66Barchart | Table
Spo109570.66Barchart | Table
Spo114410.66Barchart | Table
Spo152930.66Barchart | Table
Spo153070.66Barchart | Table
Spo157290.66Barchart | Table
Spo160560.66Barchart | Table
Spo173450.66Barchart | Table
Spo180460.66Barchart | Table
Spo183790.66Barchart | Table
Spo186360.66Barchart | Table
Spo191390.66Barchart | Table
Spo223630.66Barchart | Table
Spo238540.66Barchart | Table
Spo263350.66Barchart | Table
Spo245090.65Barchart | Table
Spo093010.65Barchart | Table
Spo254780.65Barchart | Table
Spo083090.65Barchart | Table
Spo012300.65Barchart | Table
Spo264390.65Barchart | Table
Spo208910.65Barchart | Table
Spo265030.65Barchart | Table
Spo073010.65Barchart | Table