

|
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCATCTAAGGTGATGCCTTCAACCTCCAATTCTACAAATTCGGATCTCAATTATAATCATCATAATCATAATCTTAATCTTAATAATCATCATTATTATACTAAGAATTCTTCATCGTCTTCTCAAATGATCTCCGATTTTGCCCCCGCAAACGTTGTTTACGCCGATAATCCGGTTGAATCGGGGATGGATACGGCGTTGCTTGATGCGGAGATTACCCTGATTGACGCGGCGGGGGCAATTTCTGCAATTGGGGCTGAGGAGGAGGAGACGGTGGCGATACGACGGCAGACTGGCGAGAGGAAGACGGCGGAAGAGGTTTGGAGGGAGATTGTAGCGGGGAAGAGTGAGAGGAAGGAGTTTAAGGTGGAGGCGGTGGATGAGATGATGACTTTGGAGGATTTTCTGGCGAAGGCAGGGGCGGAGATGGAGGGAGAAGTGGCGGAGGAGGTGGTGGAGGAGGACGTGAAGGTTGGGGTTTCTGGGGATTTGGAGATGAGTGATAGTGGAGGGCTGTTTGATTTTGATCAGTCGTTGGTTCAGTGTTCTTATCCACCACAACCGCAGCCGATGGAAGCTGCCTTGGGTGGTGTGATGGTGTATGGGAATGGTAGTGGTGGTGTAGGAGGAGGGATGGAGGTGATGGGTGGAGTGAGAGGGAAGAGAAGAGGTGGGCCCATTATGGAGCCGTTGGATAAGGCTGCTCAGCAGAGGCAAAGGAGGATGATCAAGAATCGGGAGTCTGCTGCCAGGTCTAGGGAGCGCAAGCAGGTATATCTCTCTCTTTTCTGTAATTTTTGATGAAATTGAGAACTGATTGAATTTCTACTTTTGGAATTGGGTTGGTAGGAATTTAAATCATCAATGAGAACTTCTACTATTTTTTGTTTTGATAGTTGTGGGAACTTCTACTTAGATGGGAGGAGTGTTAACTAAGAAAAGAAAAGATAGGAGGAGTGTTACGGTGTTACCTAATTCACGGAGCGGGTAAGCCGTGTAGGGGAACACGATTCACTATTTGACTTTGTTAAAATGGTTCAAAAGGGTTCCATTGTATCAGTTCGTGGTTCGTACGGTCTTAGCAAATTAGGTAACACTGGGTGGAAGAAGCAACTGTATATCCAGTCTAGAGAGAAAAAGTGGGTGTCTTTTGTTATTTCCCTTGTATATTTTGCTCTATGTTTGTAGTGTTTTATTTGCTTTTTTACATTTGGAATGTGTAGGCTTATCAAGTTGAGTTGGAATCGTTGGCTTTGAAGTTGGAGGAAGAGAATGAACAGCTATTGAGAGAAAAGATGGCGTCATCTAAGGTGATGCCTTCAACCTCCAATTCTACAAATTCGGATCTCAATTATAATCATCATAATCATAATCTTAATCTTAATAATCATCATTATTATACTAAGAATTCTTCATCGTCTTCTCAAATGATCTCCGATTTTGCCCCCGCAAACGTTGTTTACGCCGATAATCCGGTTGAATCGGGGATGGATACGGCGTTGCTTGATGCGGAGATTACCCTGATTGACGCGGCGGGGGCAATTTCTGCAATTGGGGCTGAGGAGGAGGAGACGGTGGCGATACGACGGCAGACTGGCGAGAGGAAGACGGCGGAAGAGGTTTGGAGGGAGATTGTAGCGGGGAAGAGTGAGAGGAAGGAGTTTAAGGTGGAGGCGGTGGATGAGATGATGACTTTGGAGGATTTTCTGGCGAAGGCAGGGGCGGAGATGGAGGGAGAAGTGGCGGAGGAGGTGGTGGAGGAGGACGTGAAGGTTGGGGTTTCTGGGGATTTGGAGATGAGTGATAGTGGAGGGCTGTTTGATTTTGATCAGTCGTTGGTTCAGTGTTCTTATCCACCACAACCGCAGCCGATGGAAGCTGCCTTGGGTGGTGTGATGGTGTATGGGAATGGTAGTGGTGGTGTAGGAGGAGGGATGGAGGTGATGGGTGGAGTGAGAGGGAAGAGAAGAGGTGGGCCCATTATGGAGCCGTTGGATAAGGCTGCTCAGCAGAGGCAAAGGAGGATGATCAAGAATCGGGAGTCTGCTGCCAGGTCTAGGGAGCGCAAGCAGGCTTATCAAGTTGAGTTGGAATCGTTGGCTTTGAAGTTGGAGGAAGAGAATGAACAGCTATTGAGAGAAAAG ATGGCGTCATCTAAGGTGATGCCTTCAACCTCCAATTCTACAAATTCGGATCTCAATTATAATCATCATAATCATAATCTTAATCTTAATAATCATCATTATTATACTAAGAATTCTTCATCGTCTTCTCAAATGATCTCCGATTTTGCCCCCGCAAACGTTGTTTACGCCGATAATCCGGTTGAATCGGGGATGGATACGGCGTTGCTTGATGCGGAGATTACCCTGATTGACGCGGCGGGGGCAATTTCTGCAATTGGGGCTGAGGAGGAGGAGACGGTGGCGATACGACGGCAGACTGGCGAGAGGAAGACGGCGGAAGAGGTTTGGAGGGAGATTGTAGCGGGGAAGAGTGAGAGGAAGGAGTTTAAGGTGGAGGCGGTGGATGAGATGATGACTTTGGAGGATTTTCTGGCGAAGGCAGGGGCGGAGATGGAGGGAGAAGTGGCGGAGGAGGTGGTGGAGGAGGACGTGAAGGTTGGGGTTTCTGGGGATTTGGAGATGAGTGATAGTGGAGGGCTGTTTGATTTTGATCAGTCGTTGGTTCAGTGTTCTTATCCACCACAACCGCAGCCGATGGAAGCTGCCTTGGGTGGTGTGATGGTGTATGGGAATGGTAGTGGTGGTGTAGGAGGAGGGATGGAGGTGATGGGTGGAGTGAGAGGGAAGAGAAGAGGTGGGCCCATTATGGAGCCGTTGGATAAGGCTGCTCAGCAGAGGCAAAGGAGGATGATCAAGAATCGGGAGTCTGCTGCCAGGTCTAGGGAGCGCAAGCAGGCTTATCAAGTTGAGTTGGAATCGTTGGCTTTGAAGTTGGAGGAAGAGAATGAACAGCTATTGAGAGAAAAG MASSKVMPSTSNSTNSDLNYNHHNHNLNLNNHHYYTKNSSSSSQMISDFAPANVVYADNPVESGMDTALLDAEITLIDAAGAISAIGAEEEETVAIRRQTGERKTAEEVWREIVAGKSERKEFKVEAVDEMMTLEDFLAKAGAEMEGEVAEEVVEEDVKVGVSGDLEMSDSGGLFDFDQSLVQCSYPPQPQPMEAALGGVMVYGNGSGGVGGGMEVMGGVRGKRRGGPIMEPLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLALKLEEENEQLLREK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05515.1 vs. NCBI nr
Match: gi|902226413|gb|KNA20359.1| (hypothetical protein SOVF_053150 [Spinacia oleracea]) HSP 1 Score: 434.5 bits (1116), Expect = 1.400e-118 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1
BLAST of Spo05515.1 vs. NCBI nr
Match: gi|731313547|ref|XP_010680820.1| (PREDICTED: G-box-binding factor 4-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 317.8 bits (813), Expect = 1.900e-83 Identity = 208/309 (67.31%), Postives = 232/309 (75.08%), Query Frame = 1
BLAST of Spo05515.1 vs. NCBI nr
Match: gi|870868743|gb|KMT19546.1| (hypothetical protein BVRB_1g011670 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 276.9 bits (707), Expect = 3.800e-71 Identity = 174/239 (72.80%), Postives = 191/239 (79.92%), Query Frame = 1
BLAST of Spo05515.1 vs. NCBI nr
Match: gi|1009138161|ref|XP_015886437.1| (PREDICTED: G-box-binding factor 4-like [Ziziphus jujuba]) HSP 1 Score: 167.5 bits (423), Expect = 3.300e-38 Identity = 151/301 (50.17%), Postives = 178/301 (59.14%), Query Frame = 1
BLAST of Spo05515.1 vs. NCBI nr
Match: gi|225460656|ref|XP_002266826.1| (PREDICTED: G-box-binding factor 4 [Vitis vinifera]) HSP 1 Score: 161.8 bits (408), Expect = 1.800e-36 Identity = 142/284 (50.00%), Postives = 170/284 (59.86%), Query Frame = 1
BLAST of Spo05515.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RN73_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_053150 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 1.000e-118 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1
BLAST of Spo05515.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FV49_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g011670 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 2.700e-71 Identity = 174/239 (72.80%), Postives = 191/239 (79.92%), Query Frame = 1
BLAST of Spo05515.1 vs. UniProtKB/TrEMBL
Match: F6GY42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0072g00470 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.200e-36 Identity = 142/284 (50.00%), Postives = 170/284 (59.86%), Query Frame = 1
BLAST of Spo05515.1 vs. UniProtKB/TrEMBL
Match: A0A067GVK3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025985mg PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.700e-36 Identity = 117/221 (52.94%), Postives = 147/221 (66.52%), Query Frame = 1
BLAST of Spo05515.1 vs. UniProtKB/TrEMBL
Match: A0A067H7S8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025985mg PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.700e-36 Identity = 117/221 (52.94%), Postives = 147/221 (66.52%), Query Frame = 1
BLAST of Spo05515.1 vs. ExPASy Swiss-Prot
Match: GBF4_ARATH (G-box-binding factor 4 OS=Arabidopsis thaliana GN=GBF4 PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.600e-21 Identity = 110/282 (39.01%), Postives = 151/282 (53.55%), Query Frame = 1
BLAST of Spo05515.1 vs. ExPASy Swiss-Prot
Match: AI5L5_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.600e-8 Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 1
BLAST of Spo05515.1 vs. ExPASy Swiss-Prot
Match: ABI5_ARATH (Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana GN=ABI5 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.500e-8 Identity = 49/95 (51.58%), Postives = 61/95 (64.21%), Query Frame = 1
BLAST of Spo05515.1 vs. ExPASy Swiss-Prot
Match: AI5L2_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.500e-8 Identity = 75/218 (34.40%), Postives = 106/218 (48.62%), Query Frame = 1
BLAST of Spo05515.1 vs. ExPASy Swiss-Prot
Match: AI5L3_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana GN=DPBF4 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.900e-7 Identity = 67/186 (36.02%), Postives = 91/186 (48.92%), Query Frame = 1
BLAST of Spo05515.1 vs. TAIR (Arabidopsis)
Match: AT5G44080.1 (Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 116.3 bits (290), Expect = 3.000e-26 Identity = 124/302 (41.06%), Postives = 160/302 (52.98%), Query Frame = 1
BLAST of Spo05515.1 vs. TAIR (Arabidopsis)
Match: AT1G03970.1 (G-box binding factor 4) HSP 1 Score: 104.8 bits (260), Expect = 9.200e-23 Identity = 110/282 (39.01%), Postives = 151/282 (53.55%), Query Frame = 1
BLAST of Spo05515.1 vs. TAIR (Arabidopsis)
Match: AT3G56850.1 (ABA-responsive element binding protein 3) HSP 1 Score: 60.5 bits (145), Expect = 2.000e-9 Identity = 75/218 (34.40%), Postives = 106/218 (48.62%), Query Frame = 1
BLAST of Spo05515.1 vs. TAIR (Arabidopsis)
Match: AT2G36270.1 (Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 60.5 bits (145), Expect = 2.000e-9 Identity = 49/95 (51.58%), Postives = 61/95 (64.21%), Query Frame = 1
BLAST of Spo05515.1 vs. TAIR (Arabidopsis)
Match: AT2G41070.1 (Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 57.0 bits (136), Expect = 2.200e-8 Identity = 67/186 (36.02%), Postives = 91/186 (48.92%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05515.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05515.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05515.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo05515.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|