Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACCCCTTGTGTGTTGACACCGGAAAATTGGGTTATGTCGACTAGTGTCGCATTTGCTCCCTGTGCGTTGTTTGTGTCACCAGGTACGTTAAACCTTTTATACAAGAAATCATTTACTGTCACTTCATTTGGGTTCTTGCAAAGCCTCCCGTTAACAACAACTGCAAATTGTTCATTAAAGTACATATTAAGTAACAATTAACAAAAGATTTAGTATAAGCAACAACATCAGTGACTCAGTGAGTATCTTATTTGGTTTGTTTCTATATATAGATTTAAGATATAAACTTTTTTAATTGTTTAAAAAATTAAGAATACTCGGAAATATCGATGATAAAACAAATATAAAACAGTGTAAAAAGGTATAAAATCTTTTTAGGTGCACAACTGAGGCGTTTAAAGGAAAATAGATAAATGATAATATTTTAAGAAACAACAAAAGTATGTGTATGGGTAGCCCTACCGGTATGCCGGTAGGACAACCCATAACAGCTGTAACATAGACATATACTCACAAGAAGCACCAAAGGTGCAGTCGGCATCCAGGGTTTACAAACCCAGTCGGCAGTTCTCTGACATCATCTGCCTATCAGAGCCGAAAGGGAGGATCCGGAACCAACGGGTAATAACCCGGGTCCTCCGTACAAATAACCCGTCTATATATACGGACCCCCATCAATGCCAAAGGTACGCAATTCCAATCCAATCATTCTTATGAGCATTTATTACAGAGCTATCAGCATAATCTGACTTAAGCATCGGAGGGGTAATTCTCGGATCACCCCCGAGGCTAGTTAACGGCTTCACTGTGCAGGCCGGATCCAGTCAGCAACCTCAGTCGGGAGTCAGTCATCCTTTTCCTGTTCCGAGTCCGCGGCCGGAACAGTATGTAAGCAAGAAAATGTTTTACCTGCAGAATTAGGATTATTGACGCCCACACAAAAATCTTGAAGGGGTGTAGGATCGGAAGCATTTGCCACGTAAATTATCGTAGCAAAGGCGGCCATGCAAAAAGTTGTCATGACCAGTTTTGGTATGCGACCTCTCTTAATATTTACCATATTTAAGCGAGACAAGTAATGTATAAGTTAATTATAATTGAGATTATATTTTGTGAAGAACTTTTTCTTTTTGGTGCAATATTTTGTGAAGAACAAATGATATATTAAAGCGTATATATAGTTGAGATGGCCATAATCAAATGTGTTTTTTCATACAAAAGTCATAATGTAATAGTATATTTGAGAAAAAATCATTATATTTGGAAATGGAAAAGTTAGACTTTGCTGTAATTTTGGAATGCTAAAAATAAATTCAATTCGATCATGCTTAGAAATAAAAATTACGTAAGCAATTAGTTAAGTAATTATTCAACTATTCAAGTCTAAATTTGCTGATTTTCTTGTAACAGTTACCATACTACAATGTTGTATAATTGTATTTATGATGTTTTTTTTGTTAATAAATTAAGTATATTGCACGAGATCAAAACTAATCATGATCATGACACATAAAAAGAGCCGATACAGAGTTTTATAGTATATTTACGTACATAAGTATTCTGTTTCACAATAGATATTACTCTATTTTATAATGATTTTCTATACTATTTATATATAAACTTTGGCAATCAATATATTTAATTACATATTATTTCAATTATAAAAGTTAGATATTTTAAAAATATATATTAAGATTAATCCATTAATAATTAAAAATAAAAATTTGTCTTTATTAATAATAAAATAATTGGTGAAAGTTAGTAAATGAATAGCGCAAAAGTCAAAATGATGTATTTATTACAAACCATAAGAGGTACTCCCTCAATCCCAGAATACTCGCACCGCTTTCCTTATAAGGTCGTCCCGGAATACTTGCATTGTTTCTATAAATGACATATTTTTCTAATTTTATAATCTTTATCTCACTTACCTAAGGTACCACTTGTATTCCTAACATCTAAAAAAACATTTGAAAAATTCACCCCCACTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNAATATCAATTACCACCTAATTAAATAATGAGAGTGATGGGTAGCTCAGTTGGTTAGAGCTTCCATCCCGATTTCAGGTGATCTGTGATCGATTCTCATCCCCGTCCTTGTGGCTCATTTACACCCAAAAATCCTAATTAAATAATAAGTTAATTAAATTGTTTTAAACTATATATCAGTCAAACTGATGCGAGTATTCCGAAACGGAGGGAGTACGACATAAAGATCAGATCTGAACATGAGTCCAATCCTAATTAATTGTGTCGGCTGCCTTTCAAGCTTAAGGACAAAATCTCCATAAACTACCCAAATTACAAGTCAAGCCGTGCAAAGTTGATTATCTCTAGACATATGTTACATATGTATAAGTGTATATATGTTACCATGCATGATCATCCCTATCTAGCTTAGGTCCTGTTCTTCTGAATTTTATTTGGCTGAACTGAGCTGAACTGAACTTAATGAAGCTGAACTGAACTAAACTGAACTGAACTAAACTAAATTTAATGGAGCTGAATGGAGCTGAACTGAACTGAATGAATAGTAAATAATAAATAATAAATAATAAATAATAAATACTCCTAATAACAATAATGTTAATATTTATAACAATACTCATAATAATATTTATAACATTCGTTAGTGGTTCTTTCTTATACTAAATCATTCGTTAGTTGGTACTTAATATTTATTACATTTTGCAGTGGTTGTTAATGGGAGGCTTTGTAAAAACCCAAATGACGTCACAATAAATGATTTCTTGTATAAAAGGTTTAACGTACCTGGAGACACAAACAACGCCCAGGGAGCAAATGCAACACTAGTCGACATAAACCAATTTCCCGGTGTCAACACACAAGGGGTGGCCATGGTTCGGGTAGACTTTGCACCCTATGGCCTAAATACCCCTCACTTGCATCCTCGTGGCTCGGAGATTTTTGCCGTGGTGGAGGGAACTATGTATGCTGGCTTTGTGACCTCCAGTTACAAGCTATATGACACGATACTTAAGAAGGGTGATGTTATTGTGTTCCCTCAAAGTCTAATCCATTTCCAATTAAATCTTGGTAAGACAGACGCTTTGGCTTATGCCTCATTTGGGAGCCAAAATCCAGGGCGAGTCAATGTCGCTGATAGTGTGTTTGCGACTACCCCACATATTCTAGACAATGTTCTTACCAAGGGGTTTCAGGTGGACGAGATGGTGATTGAGCAACTTCACTCCCAATTCTCCGCAGAAAACATATCAGTCAACACCGGGAGATCGATCTTAAAACTGTTATCTCAAACTTAA ATGGCCACCCCTTGTGTGTTGACACCGGAAAATTGGGTTATGTCGACTAGTGTCGCATTTGCTCCCTGTGCGTTGTTTGTGTCACCAGTGGTTGTTAATGGGAGGCTTTGTAAAAACCCAAATGACGTCACAATAAATGATTTCTTGTATAAAAGGTTTAACGTACCTGGAGACACAAACAACGCCCAGGGAGCAAATGCAACACTAGTCGACATAAACCAATTTCCCGGTGTCAACACACAAGGGGTGGCCATGGTTCGGGTAGACTTTGCACCCTATGGCCTAAATACCCCTCACTTGCATCCTCGTGGCTCGGAGATTTTTGCCGTGGTGGAGGGAACTATGTATGCTGGCTTTGTGACCTCCAGTTACAAGCTATATGACACGATACTTAAGAAGGGTGATGTTATTGTGTTCCCTCAAAGTCTAATCCATTTCCAATTAAATCTTGGTAAGACAGACGCTTTGGCTTATGCCTCATTTGGGAGCCAAAATCCAGGGCGAGTCAATGTCGCTGATAGTGTGTTTGCGACTACCCCACATATTCTAGACAATGTTCTTACCAAGGGGTTTCAGGTGGACGAGATGGTGATTGAGCAACTTCACTCCCAATTCTCCGCAGAAAACATATCAGTCAACACCGGGAGATCGATCTTAAAACTGTTATCTCAAACTTAA ATGGCCACCCCTTGTGTGTTGACACCGGAAAATTGGGTTATGTCGACTAGTGTCGCATTTGCTCCCTGTGCGTTGTTTGTGTCACCAGTGGTTGTTAATGGGAGGCTTTGTAAAAACCCAAATGACGTCACAATAAATGATTTCTTGTATAAAAGGTTTAACGTACCTGGAGACACAAACAACGCCCAGGGAGCAAATGCAACACTAGTCGACATAAACCAATTTCCCGGTGTCAACACACAAGGGGTGGCCATGGTTCGGGTAGACTTTGCACCCTATGGCCTAAATACCCCTCACTTGCATCCTCGTGGCTCGGAGATTTTTGCCGTGGTGGAGGGAACTATGTATGCTGGCTTTGTGACCTCCAGTTACAAGCTATATGACACGATACTTAAGAAGGGTGATGTTATTGTGTTCCCTCAAAGTCTAATCCATTTCCAATTAAATCTTGGTAAGACAGACGCTTTGGCTTATGCCTCATTTGGGAGCCAAAATCCAGGGCGAGTCAATGTCGCTGATAGTGTGTTTGCGACTACCCCACATATTCTAGACAATGTTCTTACCAAGGGGTTTCAGGTGGACGAGATGGTGATTGAGCAACTTCACTCCCAATTCTCCGCAGAAAACATATCAGTCAACACCGGGAGATCGATCTTAAAACTGTTATCTCAAACTTAA MATPCVLTPENWVMSTSVAFAPCALFVSPVVVNGRLCKNPNDVTINDFLYKRFNVPGDTNNAQGANATLVDINQFPGVNTQGVAMVRVDFAPYGLNTPHLHPRGSEIFAVVEGTMYAGFVTSSYKLYDTILKKGDVIVFPQSLIHFQLNLGKTDALAYASFGSQNPGRVNVADSVFATTPHILDNVLTKGFQVDEMVIEQLHSQFSAENISVNTGRSILKLLSQT Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05676.1 vs. NCBI nr
Match: gi|902212510|gb|KNA17005.1| (hypothetical protein SOVF_084030 [Spinacia oleracea]) HSP 1 Score: 384.0 bits (985), Expect = 1.800e-103 Identity = 190/198 (95.96%), Postives = 194/198 (97.98%), Query Frame = 1
BLAST of Spo05676.1 vs. NCBI nr
Match: gi|902197677|gb|KNA13495.1| (hypothetical protein SOVF_116280 [Spinacia oleracea]) HSP 1 Score: 367.1 bits (941), Expect = 2.200e-98 Identity = 183/198 (92.42%), Postives = 188/198 (94.95%), Query Frame = 1
BLAST of Spo05676.1 vs. NCBI nr
Match: gi|731312093|ref|XP_010672571.1| (PREDICTED: putative germin-like protein 2-1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 332.4 bits (851), Expect = 6.100e-88 Identity = 162/234 (69.23%), Postives = 190/234 (81.20%), Query Frame = 1
BLAST of Spo05676.1 vs. NCBI nr
Match: gi|731312085|ref|XP_010672543.1| (PREDICTED: putative germin-like protein 2-1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 330.5 bits (846), Expect = 2.300e-87 Identity = 161/230 (70.00%), Postives = 188/230 (81.74%), Query Frame = 1
BLAST of Spo05676.1 vs. NCBI nr
Match: gi|731312087|ref|XP_010672553.1| (PREDICTED: putative germin-like protein 2-1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 330.1 bits (845), Expect = 3.000e-87 Identity = 154/198 (77.78%), Postives = 177/198 (89.39%), Query Frame = 1
BLAST of Spo05676.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RC10_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_084030 PE=3 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 1.200e-103 Identity = 190/198 (95.96%), Postives = 194/198 (97.98%), Query Frame = 1
BLAST of Spo05676.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1W1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_116280 PE=3 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 1.600e-98 Identity = 183/198 (92.42%), Postives = 188/198 (94.95%), Query Frame = 1
BLAST of Spo05676.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FYF9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g006560 PE=3 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 4.200e-88 Identity = 162/234 (69.23%), Postives = 190/234 (81.20%), Query Frame = 1
BLAST of Spo05676.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D4C1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g006520 PE=3 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 1.600e-87 Identity = 161/230 (70.00%), Postives = 188/230 (81.74%), Query Frame = 1
BLAST of Spo05676.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D8U9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g006530 PE=3 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 2.100e-87 Identity = 154/198 (77.78%), Postives = 177/198 (89.39%), Query Frame = 1
BLAST of Spo05676.1 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 1.900e-49 Identity = 88/181 (48.62%), Postives = 127/181 (70.17%), Query Frame = 1
BLAST of Spo05676.1 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 5.600e-49 Identity = 86/181 (47.51%), Postives = 130/181 (71.82%), Query Frame = 1
BLAST of Spo05676.1 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 5.600e-49 Identity = 87/181 (48.07%), Postives = 127/181 (70.17%), Query Frame = 1
BLAST of Spo05676.1 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2) HSP 1 Score: 194.5 bits (493), Expect = 1.200e-48 Identity = 86/181 (47.51%), Postives = 127/181 (70.17%), Query Frame = 1
BLAST of Spo05676.1 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 8.000e-48 Identity = 89/183 (48.63%), Postives = 127/183 (69.40%), Query Frame = 1
BLAST of Spo05676.1 vs. TAIR (Arabidopsis)
Match: AT5G39130.1 (RmlC-like cupins superfamily protein) HSP 1 Score: 197.2 bits (500), Expect = 1.100e-50 Identity = 88/181 (48.62%), Postives = 127/181 (70.17%), Query Frame = 1
BLAST of Spo05676.1 vs. TAIR (Arabidopsis)
Match: AT5G39190.1 (germin-like protein 2) HSP 1 Score: 195.7 bits (496), Expect = 3.100e-50 Identity = 87/181 (48.07%), Postives = 127/181 (70.17%), Query Frame = 1
BLAST of Spo05676.1 vs. TAIR (Arabidopsis)
Match: AT5G39160.1 (RmlC-like cupins superfamily protein) HSP 1 Score: 194.5 bits (493), Expect = 7.000e-50 Identity = 86/181 (47.51%), Postives = 127/181 (70.17%), Query Frame = 1
BLAST of Spo05676.1 vs. TAIR (Arabidopsis)
Match: AT3G05950.1 (RmlC-like cupins superfamily protein) HSP 1 Score: 191.8 bits (486), Expect = 4.500e-49 Identity = 89/183 (48.63%), Postives = 127/183 (69.40%), Query Frame = 1
BLAST of Spo05676.1 vs. TAIR (Arabidopsis)
Match: AT3G04200.1 (RmlC-like cupins superfamily protein) HSP 1 Score: 188.7 bits (478), Expect = 3.800e-48 Identity = 90/189 (47.62%), Postives = 124/189 (65.61%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05676.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05676.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05676.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo05676.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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