Spo05761 (gene)

Overview
NameSpo05761
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionF-box family protein
LocationSpoScf_00250 : 257389 .. 260289 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAAGTATCTCCTAAAGAAAAGGAATTAAAAACTCCCAAACAGAAAAGACGATCCCGGACTTCAAACAATAAGTATTTAAGACCGGGAGCACTAGCTCAGCTCCGGTACAGCAAGGCTACCTCTACAAAGTCTTGCACTGATCTAGGGAAGAAAAGGGTTGCATTATCTGATTCCAAGAAGGTGGATGATGGTGAATTGGTAATTGCTCAGAAGGCTGTTCCCATTCAACAGACCCCTATGCTGATGTCACCTGAACGGTTCATGTTTCCTAGTGTGGCATCACCTCTCGATTTAGTGAAACAAAATAGTCTTCTTAAGACTCCGAAGACTCCCCGCTTTGAAGACTGTGATTCTGAGTCCAGGCTCGAGGCTCTTCCTATGGATTTGTTGGTATGCTCCTTATCTATTAGTTTCATTCCAATTTTTCGCATTTATAATGCTTTTATTCGTTTGCATTGACTATACTGTTTCTCATCAATCAGTTTACTGTGCTATTGCAAGAACTGAACTTGAAACTTCTGATTGTTTCCTTGTCGACTGAAAGGACAATATTTGGTCAAAAGTTACCTTTTGCAAAAGAACTCTCTTCAGTGATATTAATTGTCTCTTTCACTCATCATTCCGTGCTCTCATCAAAGTGCCTTTTTCTTTTATGGTGTATAGAGAAAGCAAAATAAGTTGCTTGCATTTATTTTCAATATGCCGAAAGCTGTAAAAGATAAACTTGCAGACTCTACTGGTGTTGAATTGTTGATGTTCTATAAGCTGAAAACACTTCGGCTGACGAAGTTCTAAGTCTACTTGGATCTTATTTATTGTAAATAACTGAATACCTGCTAATGGGTCACATCACCGTCACCTAGAAGTTAGTAGTATATTGCCCTGAGCCCTGAGGTGAGAGGGGTCAATTGCTTATTGACATGCTCGTGTCATTCAAAATGCATTTCTACTACAAGTAAGAAAATTTCCCTTTTAATTGTAGCCCAAAAGATTCATTGCTCAACCAAAATGGACCAGAAAATTGTTCGTGCTTTCTTCTTATTGTCGAGTACTCACCTCTCTAACTGTCTAACACGATAGGTTGCACATAGCTAATATCACTCCGTATCCTGATAAGGTGTCTGGTGTTGATGTTAGTATGTTTTGTTAATCAAGTTCTTTAGTGTGATAATCTGGAGGGTCTTAGTGCTTGGAGACATGTCATTTAATATACCCTGACTCAGACTTATCTGTAATGGACCCAACTAATGAGGCCCATTTGGTTGAGTTCTTTACATTATCCTTGTCAGTTGGGGTAATACTTGTGTGCTGTTTAATATACGCTGACTAAACTTAGCCTTGTCATTTGGGAGTATATTTGTGTAAAAGGTCGGAGCAAGAACATTCCAGTATTTCGTGTCATGAGTTTTAAGTTTTTTACCCACTCTAGATTATCTCCCAAATTGTCTTGGTCTATTGTTTGGAGTTGCTCCCCAATCTTAGTCTATCTCTAGTTTGGTAGGTGTGGTGGCCTGGTGGGAAATTGAGTCTGTAGTATCTTTTGGTTTTTGTCTCTTTTCTGCATTTTTGAGAACCCATGGAGTTTGAAGTGATTCGTCTTACAAAAAAAAAACCAAGATGTATTACGTTGTAAATAAAGTTTTAATTTGATTATATGGAGCACCCTAGTGACCTCATACTCTTGATAATTAAGTGTTGGAGGCGCAGTTCTTTACTGTATTTGCATCTATATTATTTTTAAAATTCAATTACCTTGAGACTTGAGTATATGTTCTGTTTTGTTTAACCTTATTAATCCCATTATGCCTAATTTTATGTGGTGTTGTTCAGGTTAAAGTCCTTTGTCACCTGCACCATGATCAGCTAAAGGCAGTTTTTCATGTTTCGCAAAGGATCAGAATGGGGGTGAGTCCCTGTCTACTACCTTTCTTCCTGGTTTATTGATGTTTCCCCTTGCTTATTTTTCTTTACCCCTTTCTGTGTTTTAAAGCCGTTTTATTGTATTGATTTTTGTGTGGATATAATTGTGGCAGGTCGTTCTTGCTAGACAGTTTCACTTTAATTATACCACTCCAGATCGATCTCGCCAGGAAATGTTGAGTACAATGACTCCACTTGCAACAGAACACTGGCCATTCTTTAGGTTTGTTTGCTGAAATTATCAATTATAAATTATCAATAAACCAATGTTCAAATCCTAAAACATTGTTTGTCCATTGCAGCAAGGGAGAGAGAAGGGGATTCCGGTTGGCAAGCCCACACACCCCAAAAGCACCAAGGCATGGTCCTCGGCCACCTTCACGTTTAAAGTATACAGAGATGAGGCAGGTTGCTGCTGCTTTGTTTCAAGAAGCATCACTGCCTTCAAGGTGCATGGTCCCATCTGTTCTGTCTAAACCCCTCTGCAAAAACCGAGTTCTATTCTATGAGGATGAACTATGTCAAGCTGTGGCTCAGAACAAACTTCGTTGATTTGATGCTTGCTTGTGTATAGTTTGTCTTCAATTCCTTAGGGGTCGCCTCGTCCCCTTTGTGTATTTTTGTTAAGAGTCTTTCTTTGTTTGTTTGTTTGCTTGCTTGGTGTTAGGTTATCTGAGGTGAAGTAGGAGGAGCATGCTGTTTTGTAGTGTGAGAGGAGTATACTAGGGTTTTTTAGTGACCTTGTTTTTTTGTTGGGTTGAGTTGAGGTCATGTTTAATATAGAGAATAACGGAATAGCTGCCTGTATATATTAAGCTATGAGTATAATATATCTATGTATAAGTCGATGAAAGGTTCCTTTGTTTTCTGTAGAAGCCTTTATTTTTTATGCAGTTTTTAATTTGTTTCTTGAATTCTGAATGCAGTTTAAACCCGTATAATCTTTACCTGAGTGTCGATTGTTTTACCTGAGGA

mRNA sequence

ATGGGGAAAGTATCTCCTAAAGAAAAGGAATTAAAAACTCCCAAACAGAAAAGACGATCCCGGACTTCAAACAATAAGTATTTAAGACCGGGAGCACTAGCTCAGCTCCGGTACAGCAAGGCTACCTCTACAAAGTCTTGCACTGATCTAGGGAAGAAAAGGGTTGCATTATCTGATTCCAAGAAGGTGGATGATGGTGAATTGGTAATTGCTCAGAAGGCTGTTCCCATTCAACAGACCCCTATGCTGATGTCACCTGAACGGTTCATGTTTCCTAGTGTGGCATCACCTCTCGATTTAGTGAAACAAAATAGTCTTCTTAAGACTCCGAAGACTCCCCGCTTTGAAGACTGTGATTCTGAGTCCAGGCTCGAGGCTCTTCCTATGGATTTGTTGGTTAAAGTCCTTTGTCACCTGCACCATGATCAGCTAAAGGCAGTTTTTCATGTTTCGCAAAGGATCAGAATGGGGGTCGTTCTTGCTAGACAGTTTCACTTTAATTATACCACTCCAGATCGATCTCGCCAGGAAATGTTGAGTACAATGACTCCACTTGCAACAGAACACTGGCCATTCTTTAGCAAGGGAGAGAGAAGGGGATTCCGGTTGGCAAGCCCACACACCCCAAAAGCACCAAGGCATGGTCCTCGGCCACCTTCACGTTTAAAGTATACAGAGATGAGGCAGGTTGCTGCTGCTTTGTTTCAAGAAGCATCACTGCCTTCAAGGTGCATGGTCCCATCTGTTCTGTCTAAACCCCTCTGCAAAAACCGAGTTCTATTCTATGAGGATGAACTATGTCAAGCTGTGGCTCAGAACAAACTTCGTTGATTTGATGCTTGCTTGTGTATAGTTTGTCTTCAATTCCTTAGGGGTCGCCTCGTCCCCTTTGTGTATTTTTGTTAAGAGTCTTTCTTTGTTTGTTTGTTTGCTTGCTTGGTGTTAGGTTATCTGAGGTGAAGTAGGAGGAGCATGCTGTTTTGTAGTGTGAGAGGAGTATACTAGGGTTTTTTAGTGACCTTGTTTTTTTGTTGGGTTGAGTTGAGGTCATGTTTAATATAGAGAATAACGGAATAGCTGCCTGTATATATTAAGCTATGAGTATAATATATCTATGTATAAGTCGATGAAAGGTTCCTTTGTTTTCTGTAGAAGCCTTTATTTTTTATGCAGTTTTTAATTTGTTTCTTGAATTCTGAATGCAGTTTAAACCCGTATAATCTTTACCTGAGTGTCGATTGTTTTACCTGAGGA

Coding sequence (CDS)

ATGGGGAAAGTATCTCCTAAAGAAAAGGAATTAAAAACTCCCAAACAGAAAAGACGATCCCGGACTTCAAACAATAAGTATTTAAGACCGGGAGCACTAGCTCAGCTCCGGTACAGCAAGGCTACCTCTACAAAGTCTTGCACTGATCTAGGGAAGAAAAGGGTTGCATTATCTGATTCCAAGAAGGTGGATGATGGTGAATTGGTAATTGCTCAGAAGGCTGTTCCCATTCAACAGACCCCTATGCTGATGTCACCTGAACGGTTCATGTTTCCTAGTGTGGCATCACCTCTCGATTTAGTGAAACAAAATAGTCTTCTTAAGACTCCGAAGACTCCCCGCTTTGAAGACTGTGATTCTGAGTCCAGGCTCGAGGCTCTTCCTATGGATTTGTTGGTTAAAGTCCTTTGTCACCTGCACCATGATCAGCTAAAGGCAGTTTTTCATGTTTCGCAAAGGATCAGAATGGGGGTCGTTCTTGCTAGACAGTTTCACTTTAATTATACCACTCCAGATCGATCTCGCCAGGAAATGTTGAGTACAATGACTCCACTTGCAACAGAACACTGGCCATTCTTTAGCAAGGGAGAGAGAAGGGGATTCCGGTTGGCAAGCCCACACACCCCAAAAGCACCAAGGCATGGTCCTCGGCCACCTTCACGTTTAAAGTATACAGAGATGAGGCAGGTTGCTGCTGCTTTGTTTCAAGAAGCATCACTGCCTTCAAGGTGCATGGTCCCATCTGTTCTGTCTAAACCCCTCTGCAAAAACCGAGTTCTATTCTATGAGGATGAACTATGTCAAGCTGTGGCTCAGAACAAACTTCGTTGA

Protein sequence

MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDSKKVDDGELVIAQKAVPIQQTPMLMSPERFMFPSVASPLDLVKQNSLLKTPKTPRFEDCDSESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRSRQEMLSTMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASLPSRCMVPSVLSKPLCKNRVLFYEDELCQAVAQNKLR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo05761.1Spo05761.1mRNA


Homology
[Close]
BLAST of Spo05761.1 vs. NCBI nr
Match: gi|902195807|gb|KNA12959.1| (hypothetical protein SOVF_121490 [Spinacia oleracea])

HSP 1 Score: 545.0 bits (1403), Expect = 7.300e-152
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 1 

		  

Query: 1   MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS 60
           MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS
Sbjct: 1   MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS 60

Query: 61  KKVDDGELVIAQKAVPIQQTPMLMSPERFMFPSVASPLDLVKQNSLLKTPKTPRFEDCDS 120
           KKVDDGELVIAQKAVPIQQTPMLMSPERFMFPSVASPLDLVKQNSLLKTPKTPRFEDCDS
Sbjct: 61  KKVDDGELVIAQKAVPIQQTPMLMSPERFMFPSVASPLDLVKQNSLLKTPKTPRFEDCDS 120

Query: 121 ESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRSRQEMLS 180
           ESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRSRQEMLS
Sbjct: 121 ESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRSRQEMLS 180

Query: 181 TMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL 240
           TMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL
Sbjct: 181 TMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL 240

Query: 241 PSRCMVPSVLSKPLCKNRVLFYEDELCQAVAQNKLR 277
           PSRCMVPSVLSKPLCKNRVLFYEDELCQAVAQNKLR
Sbjct: 241 PSRCMVPSVLSKPLCKNRVLFYEDELCQAVAQNKLR 276
[Close]
BLAST of Spo05761.1 vs. NCBI nr
Match: gi|731337614|ref|XP_010679881.1| (PREDICTED: F-box protein At4g35930 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 492.3 bits (1266), Expect = 5.600e-136
Identity = 245/276 (88.77%), Postives = 261/276 (94.57%), Query Frame = 1 

		  

Query: 1   MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS 60
           MGKVSPK+KE KTPKQ+RR+R SNNKYLRPGALAQLRY+KA+STKSCTDLGKKR+ LSDS
Sbjct: 1   MGKVSPKDKESKTPKQRRRTRASNNKYLRPGALAQLRYTKASSTKSCTDLGKKRIVLSDS 60

Query: 61  KKVDDGELVIAQKAVPIQQTPMLMSPERFMFPSVASPLDLVKQNSLLKTPKTPRFEDCDS 120
           KK D  ELVIAQK VPIQ+T  +MSPE+F F +V+SPLDLVKQNSLLKTPKTPRFE CDS
Sbjct: 61  KKGDSNELVIAQKVVPIQETSSMMSPEKFGFSAVSSPLDLVKQNSLLKTPKTPRFEGCDS 120

Query: 121 ESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRSRQEMLS 180
           ESRLEALPMDLLVKVLCHLHHDQL+AVFHVSQRIRM V++ARQFHFNYTTPDRSRQEML+
Sbjct: 121 ESRLEALPMDLLVKVLCHLHHDQLRAVFHVSQRIRMAVIVARQFHFNYTTPDRSRQEMLT 180

Query: 181 TMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL 240
           TMTPLATEHWPFFSKGE RGFRL SPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL
Sbjct: 181 TMTPLATEHWPFFSKGEGRGFRLPSPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL 240

Query: 241 PSRCMVPSVLSKPLCKNRVLFYEDELCQAVAQNKLR 277
           PSRCMVPSVLSKP+CKNRVLFYEDELCQAVAQNKLR
Sbjct: 241 PSRCMVPSVLSKPVCKNRVLFYEDELCQAVAQNKLR 276
[Close]
BLAST of Spo05761.1 vs. NCBI nr
Match: gi|147766634|emb|CAN71843.1| (hypothetical protein VITISV_036263 [Vitis vinifera])

HSP 1 Score: 391.3 bits (1004), Expect = 1.400e-105
Identity = 205/279 (73.48%), Postives = 232/279 (83.15%), Query Frame = 1 

		  

Query: 1   MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS 60
           MGKVSPKE+ +KTPKQKRR R S+NKYLRPGALAQLRYSKA +TKSCTDL KK+VA+ DS
Sbjct: 191 MGKVSPKERGMKTPKQKRRQRNSSNKYLRPGALAQLRYSKA-ATKSCTDLVKKQVAVLDS 250

Query: 61  KKVDDGELVIAQKAVPIQQTPMLMSPERFMFPSVASPLDLVKQNSLLKTPKTPRFEDCDS 120
           KK D     IA     I ++  + SPE+F F  V   L   KQ+SL+ TP+TPR ++C+S
Sbjct: 251 KKADSD---IALGGEAIDESLPIASPEKFGFSPVIGQL---KQSSLMGTPRTPRVDECES 310

Query: 121 ESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRSRQEMLS 180
           ES+LE+LPMDLLVK+LCHLHHDQL+AVFHVSQRIR  V+LARQFHFNYTTPDRSRQEML 
Sbjct: 311 ESKLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR 370

Query: 181 TMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL 240
           TMTPL TEHWPF SKG+ +G  LASPHTPKAPRHGPRPPSRLK TEMRQ+AA LFQE++L
Sbjct: 371 TMTPLPTEHWPFVSKGDGKGVFLASPHTPKAPRHGPRPPSRLKVTEMRQIAAVLFQESAL 430

Query: 241 PSRCMVPSVLSKPLCK----NRVLFYEDELCQAVAQNKL 276
           PSRCMVPS+L KPLCK    NRVLFYEDELCQAVAQNKL
Sbjct: 431 PSRCMVPSILPKPLCKSLASNRVLFYEDELCQAVAQNKL 462
[Close]
BLAST of Spo05761.1 vs. NCBI nr
Match: gi|743899721|ref|XP_011043150.1| (PREDICTED: F-box protein At4g35930 [Populus euphratica])

HSP 1 Score: 390.2 bits (1001), Expect = 3.000e-105
Identity = 198/290 (68.28%), Postives = 239/290 (82.41%), Query Frame = 1 

		  

Query: 1   MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS 60
           MGKVSPK+  LKTPKQKRR R+S+++YL+PGALAQL+YSKA++ KSCTDLGKKRVA+  +
Sbjct: 1   MGKVSPKDGNLKTPKQKRRLRSSSSRYLKPGALAQLQYSKASAAKSCTDLGKKRVAVFGN 60

Query: 61  KKV-DDGELVIAQKAVPIQQTPMLMSPERFM---------FPSVASPLDLVKQNSLLKTP 120
           KKV DD ELV+ ++A+   ++P+L+SP              P + SP+DL+KQN L +TP
Sbjct: 61  KKVGDDNELVVEERAM--DKSPLLLSPVGLCKQHHPTIDKSPLMLSPVDLLKQNHLARTP 120

Query: 121 KTPRFEDCDSESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTT 180
           KTPR EDCD+ESRLE+LPM+LLVK+LCHLHHDQL+AVFHVSQR+R  V+LARQFHFNYTT
Sbjct: 121 KTPRIEDCDTESRLESLPMELLVKILCHLHHDQLRAVFHVSQRVRKAVLLARQFHFNYTT 180

Query: 181 PDRSRQEMLSTMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQV 240
           PDRSRQEML TMTP  TEHWPF SKG  +G  +++PHTPKAPRHGPRPPSR+K TEM+ +
Sbjct: 181 PDRSRQEMLLTMTPRPTEHWPFMSKGSGKGIFMSTPHTPKAPRHGPRPPSRIKITEMKSI 240

Query: 241 AAALFQEASLPSRCMVPSVLSKPLCK----NRVLFYEDELCQAVAQNKLR 277
           AA LFQ+++L SRCMVPS L KPLCK    NRVLFYE+ELCQAVAQNKLR
Sbjct: 241 AAVLFQDSTLSSRCMVPSTLPKPLCKSVASNRVLFYEEELCQAVAQNKLR 288
[Close]
BLAST of Spo05761.1 vs. NCBI nr
Match: gi|566170745|ref|XP_006383065.1| (hypothetical protein POPTR_0005s11220g [Populus trichocarpa])

HSP 1 Score: 389.0 bits (998), Expect = 6.700e-105
Identity = 198/290 (68.28%), Postives = 238/290 (82.07%), Query Frame = 1 

		  

Query: 1   MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS 60
           MGKVSPK+  LKTPKQKRR R+S+++YL+PGALAQL+YSKA++ KSCTDLGKKRVA+  +
Sbjct: 1   MGKVSPKDGNLKTPKQKRRLRSSSSRYLKPGALAQLQYSKASAAKSCTDLGKKRVAVFGN 60

Query: 61  KKV-DDGELVIAQKAVPIQQTPMLMSPERFM---------FPSVASPLDLVKQNSLLKTP 120
           KKV DD ELV+  +A+   ++P+L+SP              P + SP+DL+KQN L +TP
Sbjct: 61  KKVGDDDELVVEDRAM--DKSPLLLSPVGLCKQHHPTIDKSPLMLSPVDLLKQNHLARTP 120

Query: 121 KTPRFEDCDSESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTT 180
           KTPR EDCD+ESRLE+LPM+LLVK+LCHLHHDQL+AVFHVSQR+R  V+LARQFHFNYTT
Sbjct: 121 KTPRIEDCDTESRLESLPMELLVKILCHLHHDQLRAVFHVSQRVRKAVLLARQFHFNYTT 180

Query: 181 PDRSRQEMLSTMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQV 240
           PDRSRQEML TMTP  TEHWPF SKG  +G  +++PHTPKAPRHGPRPPSR+K TEM+ +
Sbjct: 181 PDRSRQEMLLTMTPRPTEHWPFMSKGSGKGIFMSTPHTPKAPRHGPRPPSRIKITEMKSI 240

Query: 241 AAALFQEASLPSRCMVPSVLSKPLCK----NRVLFYEDELCQAVAQNKLR 277
           AA LFQ+++L SRCMVPS L KPLCK    NRVLFYE+ELCQAVAQNKLR
Sbjct: 241 AAVLFQDSTLSSRCMVPSTLPKPLCKSVASNRVLFYEEELCQAVAQNKLR 288
[Close]
BLAST of Spo05761.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1Z9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_121490 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 5.100e-152
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 1 

		  

Query: 1   MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS 60
           MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS
Sbjct: 1   MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS 60

Query: 61  KKVDDGELVIAQKAVPIQQTPMLMSPERFMFPSVASPLDLVKQNSLLKTPKTPRFEDCDS 120
           KKVDDGELVIAQKAVPIQQTPMLMSPERFMFPSVASPLDLVKQNSLLKTPKTPRFEDCDS
Sbjct: 61  KKVDDGELVIAQKAVPIQQTPMLMSPERFMFPSVASPLDLVKQNSLLKTPKTPRFEDCDS 120

Query: 121 ESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRSRQEMLS 180
           ESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRSRQEMLS
Sbjct: 121 ESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRSRQEMLS 180

Query: 181 TMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL 240
           TMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL
Sbjct: 181 TMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL 240

Query: 241 PSRCMVPSVLSKPLCKNRVLFYEDELCQAVAQNKLR 277
           PSRCMVPSVLSKPLCKNRVLFYEDELCQAVAQNKLR
Sbjct: 241 PSRCMVPSVLSKPLCKNRVLFYEDELCQAVAQNKLR 276
[Close]
BLAST of Spo05761.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CBJ8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g130140 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 3.900e-136
Identity = 245/276 (88.77%), Postives = 261/276 (94.57%), Query Frame = 1 

		  

Query: 1   MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS 60
           MGKVSPK+KE KTPKQ+RR+R SNNKYLRPGALAQLRY+KA+STKSCTDLGKKR+ LSDS
Sbjct: 1   MGKVSPKDKESKTPKQRRRTRASNNKYLRPGALAQLRYTKASSTKSCTDLGKKRIVLSDS 60

Query: 61  KKVDDGELVIAQKAVPIQQTPMLMSPERFMFPSVASPLDLVKQNSLLKTPKTPRFEDCDS 120
           KK D  ELVIAQK VPIQ+T  +MSPE+F F +V+SPLDLVKQNSLLKTPKTPRFE CDS
Sbjct: 61  KKGDSNELVIAQKVVPIQETSSMMSPEKFGFSAVSSPLDLVKQNSLLKTPKTPRFEGCDS 120

Query: 121 ESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRSRQEMLS 180
           ESRLEALPMDLLVKVLCHLHHDQL+AVFHVSQRIRM V++ARQFHFNYTTPDRSRQEML+
Sbjct: 121 ESRLEALPMDLLVKVLCHLHHDQLRAVFHVSQRIRMAVIVARQFHFNYTTPDRSRQEMLT 180

Query: 181 TMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL 240
           TMTPLATEHWPFFSKGE RGFRL SPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL
Sbjct: 181 TMTPLATEHWPFFSKGEGRGFRLPSPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL 240

Query: 241 PSRCMVPSVLSKPLCKNRVLFYEDELCQAVAQNKLR 277
           PSRCMVPSVLSKP+CKNRVLFYEDELCQAVAQNKLR
Sbjct: 241 PSRCMVPSVLSKPVCKNRVLFYEDELCQAVAQNKLR 276
[Close]
BLAST of Spo05761.1 vs. UniProtKB/TrEMBL
Match: A5AZ75_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036263 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 9.400e-106
Identity = 205/279 (73.48%), Postives = 232/279 (83.15%), Query Frame = 1 

		  

Query: 1   MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS 60
           MGKVSPKE+ +KTPKQKRR R S+NKYLRPGALAQLRYSKA +TKSCTDL KK+VA+ DS
Sbjct: 191 MGKVSPKERGMKTPKQKRRQRNSSNKYLRPGALAQLRYSKA-ATKSCTDLVKKQVAVLDS 250

Query: 61  KKVDDGELVIAQKAVPIQQTPMLMSPERFMFPSVASPLDLVKQNSLLKTPKTPRFEDCDS 120
           KK D     IA     I ++  + SPE+F F  V   L   KQ+SL+ TP+TPR ++C+S
Sbjct: 251 KKADSD---IALGGEAIDESLPIASPEKFGFSPVIGQL---KQSSLMGTPRTPRVDECES 310

Query: 121 ESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRSRQEMLS 180
           ES+LE+LPMDLLVK+LCHLHHDQL+AVFHVSQRIR  V+LARQFHFNYTTPDRSRQEML 
Sbjct: 311 ESKLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR 370

Query: 181 TMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQVAAALFQEASL 240
           TMTPL TEHWPF SKG+ +G  LASPHTPKAPRHGPRPPSRLK TEMRQ+AA LFQE++L
Sbjct: 371 TMTPLPTEHWPFVSKGDGKGVFLASPHTPKAPRHGPRPPSRLKVTEMRQIAAVLFQESAL 430

Query: 241 PSRCMVPSVLSKPLCK----NRVLFYEDELCQAVAQNKL 276
           PSRCMVPS+L KPLCK    NRVLFYEDELCQAVAQNKL
Sbjct: 431 PSRCMVPSILPKPLCKSLASNRVLFYEDELCQAVAQNKL 462
[Close]
BLAST of Spo05761.1 vs. UniProtKB/TrEMBL
Match: B9MXD0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s11220g PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 4.700e-105
Identity = 198/290 (68.28%), Postives = 238/290 (82.07%), Query Frame = 1 

		  

Query: 1   MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS 60
           MGKVSPK+  LKTPKQKRR R+S+++YL+PGALAQL+YSKA++ KSCTDLGKKRVA+  +
Sbjct: 1   MGKVSPKDGNLKTPKQKRRLRSSSSRYLKPGALAQLQYSKASAAKSCTDLGKKRVAVFGN 60

Query: 61  KKV-DDGELVIAQKAVPIQQTPMLMSPERFM---------FPSVASPLDLVKQNSLLKTP 120
           KKV DD ELV+  +A+   ++P+L+SP              P + SP+DL+KQN L +TP
Sbjct: 61  KKVGDDDELVVEDRAM--DKSPLLLSPVGLCKQHHPTIDKSPLMLSPVDLLKQNHLARTP 120

Query: 121 KTPRFEDCDSESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTT 180
           KTPR EDCD+ESRLE+LPM+LLVK+LCHLHHDQL+AVFHVSQR+R  V+LARQFHFNYTT
Sbjct: 121 KTPRIEDCDTESRLESLPMELLVKILCHLHHDQLRAVFHVSQRVRKAVLLARQFHFNYTT 180

Query: 181 PDRSRQEMLSTMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRLKYTEMRQV 240
           PDRSRQEML TMTP  TEHWPF SKG  +G  +++PHTPKAPRHGPRPPSR+K TEM+ +
Sbjct: 181 PDRSRQEMLLTMTPRPTEHWPFMSKGSGKGIFMSTPHTPKAPRHGPRPPSRIKITEMKSI 240

Query: 241 AAALFQEASLPSRCMVPSVLSKPLCK----NRVLFYEDELCQAVAQNKLR 277
           AA LFQ+++L SRCMVPS L KPLCK    NRVLFYE+ELCQAVAQNKLR
Sbjct: 241 AAVLFQDSTLSSRCMVPSTLPKPLCKSVASNRVLFYEEELCQAVAQNKLR 288
[Close]
BLAST of Spo05761.1 vs. UniProtKB/TrEMBL
Match: A0A068U0L4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00037037001 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 4.400e-103
Identity = 195/298 (65.44%), Postives = 237/298 (79.53%), Query Frame = 1 

		  

Query: 1   MGKVSPKEKELKTPKQKRRSRTSNNKYLRPGALAQLRYSKATSTKSCTDLGKKRVALSDS 60
           MGKVSPK++E KT KQKRR R+S+NKYLRPGALAQLRY+KA++ KSCTDLGKKRVAL D+
Sbjct: 1   MGKVSPKDRETKTGKQKRRPRSSSNKYLRPGALAQLRYNKASAAKSCTDLGKKRVALVDA 60

Query: 61  KKVDDGELVIAQKAVPIQQTPMLMSPERFMF-------PSVASPL-----------DLVK 120
            K    ++++  K   I ++P ++SP +F F       P++ SP+           D  K
Sbjct: 61  DK-QKNDVILENKI--INRSPTILSPVKFGFGSAMEKSPTILSPIRSGIGPLFGAIDSFK 120

Query: 121 QNSLLKTPKTPRFEDCDSESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLAR 180
           QN+L KTPKTPR E+C SESR+E+LPMDLLVK++CHLHHDQL+AVFHVSQ+IR  V+ AR
Sbjct: 121 QNNLQKTPKTPRAEECKSESRIESLPMDLLVKIMCHLHHDQLRAVFHVSQKIRKAVIQAR 180

Query: 181 QFHFNYTTPDRSRQEMLSTMTPLATEHWPFFSKGERRGFRLASPHTPKAPRHGPRPPSRL 240
           QFHFNYTTPDR+RQEML TMTPL T+HWPF SKG+ +G  + SPHTPKAPRHGPRPPSRL
Sbjct: 181 QFHFNYTTPDRTRQEMLRTMTPLPTDHWPFMSKGDGKGIWIPSPHTPKAPRHGPRPPSRL 240

Query: 241 KYTEMRQVAAALFQEASLPSRCMVPSVLSKPLCK----NRVLFYEDELCQAVAQNKLR 277
           K+TEMRQ+AA LFQE++ PSRC+VPS LS+P+CK    NR LFYE+ELCQAVAQNKLR
Sbjct: 241 KFTEMRQIAAVLFQESAFPSRCLVPSALSQPICKSLASNRALFYEEELCQAVAQNKLR 295
[Close]
BLAST of Spo05761.1 vs. ExPASy Swiss-Prot
Match: FB248_ARATH (F-box protein At4g35930 OS=Arabidopsis thaliana GN=At4g35930 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.000e-65
Identity = 123/192 (64.06%), Postives = 148/192 (77.08%), Query Frame = 1 

		  

Query: 92  PSVASPLDLVKQNSLLKTPKTPRFEDCDSESRLEALPMDLLVKVLCHLHHDQLKAVFHVS 151
           P + SP+ +V QN+LL+TPKTP+ + C SES+LE+LPMDLLVK++CHLHHDQLKAVFHVS
Sbjct: 130 PLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHDQLKAVFHVS 189

Query: 152 QRIRMGVVLARQFHFNYTTPDRSRQEMLSTMTPLATEHWPFFSKGERRGFRLASPHTPKA 211
           QRIRM  +LARQ+HFNYTTPDRSRQEML  MTP+    WP F +G+     ++SPHTPKA
Sbjct: 190 QRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWP-FRRGDGNPTMVSSPHTPKA 249

Query: 212 PRHGPRPPSRLKYTEMRQVAAALFQEAS-LPSRCMVPSVLSKPLC-------KNRVLFYE 271
           P+H PRPPSR K  EM+Q+ A LFQ+ +  PSRC+VPSVL +P           RVLFYE
Sbjct: 250 PKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAPKHPRVLFYE 309

Query: 272 DELCQAVAQNKL 276
           DELCQAVAQN L
Sbjct: 310 DELCQAVAQNNL 320
[Close]
BLAST of Spo05761.1 vs. ExPASy Swiss-Prot
Match: FB316_ARATH (F-box protein At1g61340 OS=Arabidopsis thaliana GN=At1g61340 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.800e-8
Identity = 42/137 (30.66%), Postives = 73/137 (53.28%), Query Frame = 1 

		  

Query: 50  LGKKRVA-----LSDSKKVDDGELVIAQKAVPIQQTPMLMSPERFMFPSVASPLDLVKQN 109
           LGKKR+      L   + VD+G L +  + V  ++       +R +  S         ++
Sbjct: 3   LGKKRIVTQKPNLRQRRDVDNGGLGLGLEFVQYKRG---FGRKRILISSGDE-----MED 62

Query: 110 SLLKTPKTPRFED------CDSESR-LEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMG 169
           S+  +P   +  D       + +SR LE LP+D+LV+++C + H+ LK +FHVS+ IR  
Sbjct: 63  SIFTSPVGKKLCDDKTTSVAEGQSRELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREA 122

Query: 170 VVLARQFHFNYTTPDRS 175
            ++A+Q HF Y+TP ++
Sbjct: 123 TMIAKQSHFAYSTPRKT 131
[Close]
BLAST of Spo05761.1 vs. ExPASy Swiss-Prot
Match: SKI27_ARATH (F-box protein SKIP27 OS=Arabidopsis thaliana GN=SKIP27 PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 1.300e-7
Identity = 26/55 (47.27%), Postives = 40/55 (72.73%), Query Frame = 1 

		  

Query: 121 ESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRSR 176
           +SRLE LP DLL++V+C + H+ LK++  VS+ IR   ++A+  HF YTTP ++R
Sbjct: 121 KSRLECLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAKTLHFAYTTPKKTR 175
[Close]
BLAST of Spo05761.1 vs. ExPASy Swiss-Prot
Match: FB220_ARATH (F-box protein At4g05010 OS=Arabidopsis thaliana GN=At4g05010 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.400e-7
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 1 

		  

Query: 107 LKTPKTPRFEDCDSESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHF 166
           +K P     E C   S LE L  D+L++VLCH+ H+ L  +  VS+ IR  V+ A++ HF
Sbjct: 49  VKRPSHETTESC--RSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHF 108

Query: 167 NYTTPDR 174
           +Y+TP +
Sbjct: 109 DYSTPKK 113
[Close]
BLAST of Spo05761.1 vs. TAIR (Arabidopsis)
Match: AT4G35930.1 (F-box family protein)

HSP 1 Score: 249.6 bits (636), Expect = 2.200e-66
Identity = 123/192 (64.06%), Postives = 148/192 (77.08%), Query Frame = 1 

		  

Query: 92  PSVASPLDLVKQNSLLKTPKTPRFEDCDSESRLEALPMDLLVKVLCHLHHDQLKAVFHVS 151
           P + SP+ +V QN+LL+TPKTP+ + C SES+LE+LPMDLLVK++CHLHHDQLKAVFHVS
Sbjct: 130 PLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHDQLKAVFHVS 189

Query: 152 QRIRMGVVLARQFHFNYTTPDRSRQEMLSTMTPLATEHWPFFSKGERRGFRLASPHTPKA 211
           QRIRM  +LARQ+HFNYTTPDRSRQEML  MTP+    WP F +G+     ++SPHTPKA
Sbjct: 190 QRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWP-FRRGDGNPTMVSSPHTPKA 249

Query: 212 PRHGPRPPSRLKYTEMRQVAAALFQEAS-LPSRCMVPSVLSKPLC-------KNRVLFYE 271
           P+H PRPPSR K  EM+Q+ A LFQ+ +  PSRC+VPSVL +P           RVLFYE
Sbjct: 250 PKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAPKHPRVLFYE 309

Query: 272 DELCQAVAQNKL 276
           DELCQAVAQN L
Sbjct: 310 DELCQAVAQNNL 320
[Close]
BLAST of Spo05761.1 vs. TAIR (Arabidopsis)
Match: AT4G21510.1 (F-box family protein)

HSP 1 Score: 58.5 bits (140), Expect = 7.300e-9
Identity = 26/55 (47.27%), Postives = 40/55 (72.73%), Query Frame = 1 

		  

Query: 121 ESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRSR 176
           +SRLE LP DLL++V+C + H+ LK++  VS+ IR   ++A+  HF YTTP ++R
Sbjct: 121 KSRLECLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAKTLHFAYTTPKKTR 175
[Close]
BLAST of Spo05761.1 vs. TAIR (Arabidopsis)
Match: AT4G05010.1 (F-box family protein)

HSP 1 Score: 55.8 bits (133), Expect = 4.800e-8
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 1 

		  

Query: 107 LKTPKTPRFEDCDSESRLEALPMDLLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHF 166
           +K P     E C   S LE L  D+L++VLCH+ H+ L  +  VS+ IR  V+ A++ HF
Sbjct: 49  VKRPSHETTESC--RSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHF 108

Query: 167 NYTTPDR 174
           +Y+TP +
Sbjct: 109 DYSTPKK 113
[Close]
BLAST of Spo05761.1 vs. TAIR (Arabidopsis)
Match: AT1G61340.2 (F-box family protein)

HSP 1 Score: 48.5 bits (114), Expect = 7.600e-6
Identity = 18/44 (40.91%), Postives = 33/44 (75.00%), Query Frame = 1 

		  

Query: 131 LLVKVLCHLHHDQLKAVFHVSQRIRMGVVLARQFHFNYTTPDRS 175
           ++V+++C + H+ LK +FHVS+ IR   ++A+Q HF Y+TP ++
Sbjct: 134 VIVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 177
The following BLAST results are available for this feature:
BLAST of Spo05761.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902195807|gb|KNA12959.1|7.3e-152100.hypothetical protein SOVF_1214... [more]
gi|731337614|ref|XP_010679881.1|5.6e-13688.7PREDICTED: F-box protein At4g3... [more]
gi|147766634|emb|CAN71843.1|1.4e-10573.4hypothetical protein VITISV_03... [more]
gi|743899721|ref|XP_011043150.1|3.0e-10568.2PREDICTED: F-box protein At4g3... [more]
gi|566170745|ref|XP_006383065.1|6.7e-10568.2hypothetical protein POPTR_000... [more]
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BLAST of Spo05761.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R1Z9_SPIOL5.1e-152100.Uncharacterized protein OS=Spi... [more]
A0A0J8CBJ8_BETVU3.9e-13688.7Uncharacterized protein OS=Bet... [more]
A5AZ75_VITVI9.4e-10673.4Putative uncharacterized prote... [more]
B9MXD0_POPTR4.7e-10568.2Uncharacterized protein OS=Pop... [more]
A0A068U0L4_COFCA4.4e-10365.4Uncharacterized protein OS=Cof... [more]
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BLAST of Spo05761.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
FB248_ARATH4.0e-6564.0F-box protein At4g35930 OS=Ara... [more]
FB316_ARATH5.8e-830.6F-box protein At1g61340 OS=Ara... [more]
SKI27_ARATH1.3e-747.2F-box protein SKIP27 OS=Arabid... [more]
FB220_ARATH8.4e-740.3F-box protein At4g05010 OS=Ara... [more]
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BLAST of Spo05761.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT4G35930.12.2e-6664.0F-box family protein[more]
AT4G21510.17.3e-947.2F-box family protein[more]
AT4G05010.14.8e-840.3F-box family protein[more]
AT1G61340.27.6e-640.9F-box family protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34049FAMILY NOT NAMEDcoord: 1..276
score: 1.2E
NoneNo IPR availablePANTHERPTHR34049:SF2SUBFAMILY NOT NAMEDcoord: 1..276
score: 1.2E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006457 protein folding
biological_process GO:0048478 replication fork protection
biological_process GO:0006974 cellular response to DNA damage stimulus
biological_process GO:0007049 cell cycle
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0006412 translation
biological_process GO:0030001 metal ion transport
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006396 RNA processing
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006421 asparaginyl-tRNA aminoacylation
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0006448 regulation of translational elongation
cellular_component GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0005840 ribosome
cellular_component GO:0005634 nucleus
cellular_component GO:0005618 cell wall
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005737 cytoplasm
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0004816 asparagine-tRNA ligase activity
RNA-Seq Expression