Spo05777 (gene)

Overview
NameSpo05777
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionLate embryogenesis abundant protein
LocationSpoScf_01833 : 85777 .. 87021 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACGGATTTAAAACGACCCTAAACGACCCTTAGAAGCCGTCAAGCCGAGGAAGAAACCTCCTGACTCCTGAGAGGCGCCTAATATTGACGCGGTCCTTTACTAACCCTACTGGGACGCCTTTGTTTCTCACCACTTGCTTTTTATTTTTTACAGCTGCATTTCTCAGCATCCTCTATATATACCCCCTTCACTCCCTCATCAAACCCCATCTCAACATTCAACACTCTCCCTCTTCATCAAAGCATACAAACAGAGCAACCAACAAAGAGGCAAAGCTTTTCCGACTTTTTCTCACCGCCGCCGTCGTCGTTAGAGGTTTTTGTGGACTAGAACTTCCTTCTACGGCGGCTTTTTTTTTACAAATAATAACAAAACTAATAATATCGATCAATGGCTCGCTCTCTTTCTAACGCTAAGGTCTTCTTCAACCTTGTTGCTGAAAATGTCTCCATTGCTTCTCAAAGGTAAGCTAAACTCGTCGTTTTTGTTACCCTTTTGATACAGGGAGGGGTATTCTTGTCTTTTACATTTTTATTAATGTAAAATTAAACTTGTTGATTGAACAGGCGAGGATACGCTGCAGCGTCACAAGGGGTTGCAGGGATAGGTGGAAGCGAGAAGAAATTGACCAAAGAAGAGATCGGACGGTCAGCAGAGAAGTCGTGGATCCCGGATCCAGTAACTGGATACTACAGGCCGGCTAATCGTGCGGTTGAGATTGATGTTGCTGAGCTCCGTGAAATATTCCTCAAGCAGAAGATTACATCTCACTAGATTTAATTATTTACGACTAAACAAATTAAAGGAAAAAAAAGAAATGATCAATGATGCCGGTTACGGTTTAGTATGTGACCGTCGGGTGAGATTATCAGATTGCGAACCAAAAAAAAGGAGAAGAATTGTGAGCTTTCGTTGTTTGTAATTCATGACTATTATGTCCTCTGTTCTTTTGAGAGTTTGAGTCACAATCAAGTTGTGACTTCTCATTTCAAAAATTATTATATATTAATGACAATACGAGTGTGTTTAATTACATCTTGCAATTACAATTTAGACAATTTTTTTTTTATTAATGTTGCAATTGTAGTAAAATCGAGGAGGTACATTACCACTCTGTATAAACTTTATGAATGTACAAATGTACAATATTTCTCGTAGACGTGTGCTTAATGAACATTGTACACGAACATAACTTACGGGCTTTAAATTTAAAAACATGAAATAGCATTACTTAAAGTGTAAAA

mRNA sequence

CACGGATTTAAAACGACCCTAAACGACCCTTAGAAGCCGTCAAGCCGAGGAAGAAACCTCCTGACTCCTGAGAGGCGCCTAATATTGACGCGGTCCTTTACTAACCCTACTGGGACGCCTTTGTTTCTCACCACTTGCTTTTTATTTTTTACAGCTGCATTTCTCAGCATCCTCTATATATACCCCCTTCACTCCCTCATCAAACCCCATCTCAACATTCAACACTCTCCCTCTTCATCAAAGCATACAAACAGAGCAACCAACAAAGAGGCAAAGCTTTTCCGACTTTTTCTCACCGCCGCCGTCGTCGTTAGAGGTTTTTGTGGACTAGAACTTCCTTCTACGGCGGCTTTTTTTTTACAAATAATAACAAAACTAATAATATCGATCAATGGCTCGCTCTCTTTCTAACGCTAAGGTCTTCTTCAACCTTGTTGCTGAAAATGTCTCCATTGCTTCTCAAAGGCGAGGATACGCTGCAGCGTCACAAGGGGTTGCAGGGATAGGTGGAAGCGAGAAGAAATTGACCAAAGAAGAGATCGGACGGTCAGCAGAGAAGTCGTGGATCCCGGATCCAGTAACTGGATACTACAGGCCGGCTAATCGTGCGGTTGAGATTGATGTTGCTGAGCTCCGTGAAATATTCCTCAAGCAGAAGATTACATCTCACTAGATTTAATTATTTACGACTAAACAAATTAAAGGAAAAAAAAGAAATGATCAATGATGCCGGTTACGGTTTAGTATGTGACCGTCGGGTGAGATTATCAGATTGCGAACCAAAAAAAAGGAGAAGAATTGTGAGCTTTCGTTGTTTGTAATTCATGACTATTATGTCCTCTGTTCTTTTGAGAGTTTGAGTCACAATCAAGTTGTGACTTCTCATTTCAAAAATTATTATATATTAATGACAATACGAGTGTGTTTAATTACATCTTGCAATTACAATTTAGACAATTTTTTTTTTATTAATGTTGCAATTGTAGTAAAATCGAGGAGGTACATTACCACTCTGTATAAACTTTATGAATGTACAAATGTACAATATTTCTCGTAGACGTGTGCTTAATGAACATTGTACACGAACATAACTTACGGGCTTTAAATTTAAAAACATGAAATAGCATTACTTAAAGTGTAAAA

Coding sequence (CDS)

ATGGCTCGCTCTCTTTCTAACGCTAAGGTCTTCTTCAACCTTGTTGCTGAAAATGTCTCCATTGCTTCTCAAAGGCGAGGATACGCTGCAGCGTCACAAGGGGTTGCAGGGATAGGTGGAAGCGAGAAGAAATTGACCAAAGAAGAGATCGGACGGTCAGCAGAGAAGTCGTGGATCCCGGATCCAGTAACTGGATACTACAGGCCGGCTAATCGTGCGGTTGAGATTGATGTTGCTGAGCTCCGTGAAATATTCCTCAAGCAGAAGATTACATCTCACTAG

Protein sequence

MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIPDPVTGYYRPANRAVEIDVAELREIFLKQKITSH
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo05777.1Spo05777.1mRNA


Homology
[Close]
BLAST of Spo05777.1 vs. NCBI nr
Match: gi|902204229|gb|KNA14821.1| (hypothetical protein SOVF_103990 [Spinacia oleracea])

HSP 1 Score: 180.6 bits (457), Expect = 1.200e-42
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP 60
          MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP
Sbjct: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP 60

Query: 61 DPVTGYYRPANRAVEIDVAELREIFLKQKITSH 94
          DPVTGYYRPANRAVEIDVAELREIFLKQKITSH
Sbjct: 61 DPVTGYYRPANRAVEIDVAELREIFLKQKITSH 93
[Close]
BLAST of Spo05777.1 vs. NCBI nr
Match: gi|731346245|ref|XP_010684355.1| (PREDICTED: late embryogenesis abundant protein Lea5 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 140.6 bits (353), Expect = 1.400e-30
Identity = 71/92 (77.17%), Postives = 79/92 (85.87%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP 60
          MARSLSNAKVFF+LV +N+S+ASQRRGYAAASQGVA +G    K  +EE GRSAE SW+P
Sbjct: 1  MARSLSNAKVFFSLVVDNISMASQRRGYAAASQGVAAVGRGSGKSGQEERGRSAENSWVP 60

Query: 61 DPVTGYYRPANRAVEIDVAELREIFLKQKITS 93
          DPVTGYYRPANRA EIDVAELRE+ LKQKI S
Sbjct: 61 DPVTGYYRPANRAAEIDVAELREMLLKQKIRS 92
[Close]
BLAST of Spo05777.1 vs. NCBI nr
Match: gi|310780836|gb|ADP23916.1| (late embryogenesis abundant protein [Sesuvium portulacastrum])

HSP 1 Score: 126.7 bits (317), Expect = 2.100e-26
Identity = 68/94 (72.34%), Postives = 74/94 (78.72%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEK----KLTKEEIGRSAEK 60
          MARSLSNAKVF +LV++N+SI   RRGYAAASQGVAG  G       K  KEE+GR  E 
Sbjct: 1  MARSLSNAKVFVSLVSDNLSIVLNRRGYAAASQGVAGTVGRGTGRIGKAGKEEVGRGGEN 60

Query: 61 SWIPDPVTGYYRPANRAVEIDVAELREIFLKQKI 91
          SW+PDPVTGYYRPANR  EIDVAELREIFLKQKI
Sbjct: 61 SWVPDPVTGYYRPANRPDEIDVAELREIFLKQKI 94
[Close]
BLAST of Spo05777.1 vs. NCBI nr
Match: gi|374719871|gb|AEZ67462.1| (late embryogenesis abundant proteins, partial [Haloxylon ammodendron])

HSP 1 Score: 104.8 bits (260), Expect = 8.500e-20
Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVA----GIGGSEKKLTKEEIGRSAEK 60
          MARS+SNAKV  +LVA+N+SIASQRRGYAAASQ VA         +K  TKEEIGRSAE+
Sbjct: 1  MARSISNAKVILSLVADNISIASQRRGYAAASQRVAVEVARAASGKKTTTKEEIGRSAEQ 60

Query: 61 SWIPDPVTGYYRPANRA 74
          SW+PDPVTGYYRPAN A
Sbjct: 61 SWVPDPVTGYYRPANHA 77
[Close]
BLAST of Spo05777.1 vs. NCBI nr
Match: gi|363497938|gb|AEW24432.1| (late embryogenesis abundant protein 3L-1 [Camellia sinensis])

HSP 1 Score: 97.8 bits (242), Expect = 1.000e-17
Identity = 56/98 (57.14%), Postives = 65/98 (66.33%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAG-----IGGSEKKLTKEEIGRSAE 60
          MARS SNAK+    V + +S+A  RRGYAAASQGVA       GG   K   EE   + +
Sbjct: 1  MARSFSNAKLLSAFVVDRISLAVTRRGYAAASQGVASGPVTARGGVMGKKDGEE--EATK 60

Query: 61 KSWIPDPVTGYYRPANRAVEIDVAELREIFLKQKITSH 94
           SW+PDPVTGYYRP N+A EIDVAELRE+ LK KI  H
Sbjct: 61 TSWVPDPVTGYYRPENKANEIDVAELREMLLKNKIRRH 96
[Close]
BLAST of Spo05777.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5N8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_103990 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 8.500e-43
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP 60
          MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP
Sbjct: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP 60

Query: 61 DPVTGYYRPANRAVEIDVAELREIFLKQKITSH 94
          DPVTGYYRPANRAVEIDVAELREIFLKQKITSH
Sbjct: 61 DPVTGYYRPANRAVEIDVAELREIFLKQKITSH 93
[Close]
BLAST of Spo05777.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BXX1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163660 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 9.800e-31
Identity = 71/92 (77.17%), Postives = 79/92 (85.87%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP 60
          MARSLSNAKVFF+LV +N+S+ASQRRGYAAASQGVA +G    K  +EE GRSAE SW+P
Sbjct: 1  MARSLSNAKVFFSLVVDNISMASQRRGYAAASQGVAAVGRGSGKSGQEERGRSAENSWVP 60

Query: 61 DPVTGYYRPANRAVEIDVAELREIFLKQKITS 93
          DPVTGYYRPANRA EIDVAELRE+ LKQKI S
Sbjct: 61 DPVTGYYRPANRAAEIDVAELREMLLKQKIRS 92
[Close]
BLAST of Spo05777.1 vs. UniProtKB/TrEMBL
Match: E3W6T3_SESPO (Late embryogenesis abundant protein OS=Sesuvium portulacastrum GN=Lea5 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.500e-26
Identity = 68/94 (72.34%), Postives = 74/94 (78.72%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEK----KLTKEEIGRSAEK 60
          MARSLSNAKVF +LV++N+SI   RRGYAAASQGVAG  G       K  KEE+GR  E 
Sbjct: 1  MARSLSNAKVFVSLVSDNLSIVLNRRGYAAASQGVAGTVGRGTGRIGKAGKEEVGRGGEN 60

Query: 61 SWIPDPVTGYYRPANRAVEIDVAELREIFLKQKI 91
          SW+PDPVTGYYRPANR  EIDVAELREIFLKQKI
Sbjct: 61 SWVPDPVTGYYRPANRPDEIDVAELREIFLKQKI 94
[Close]
BLAST of Spo05777.1 vs. UniProtKB/TrEMBL
Match: H6WP43_9CARY (Late embryogenesis abundant proteins (Fragment) OS=Haloxylon ammodendron GN=LEA3 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.900e-20
Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVA----GIGGSEKKLTKEEIGRSAEK 60
          MARS+SNAKV  +LVA+N+SIASQRRGYAAASQ VA         +K  TKEEIGRSAE+
Sbjct: 1  MARSISNAKVILSLVADNISIASQRRGYAAASQRVAVEVARAASGKKTTTKEEIGRSAEQ 60

Query: 61 SWIPDPVTGYYRPANRA 74
          SW+PDPVTGYYRPAN A
Sbjct: 61 SWVPDPVTGYYRPANHA 77
[Close]
BLAST of Spo05777.1 vs. UniProtKB/TrEMBL
Match: G9HVM5_CAMSI (Late embryogenesis abundant protein 3L-1 OS=Camellia sinensis GN=LEA3L-1 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.300e-18
Identity = 56/98 (57.14%), Postives = 65/98 (66.33%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAG-----IGGSEKKLTKEEIGRSAE 60
          MARS SNAK+    V + +S+A  RRGYAAASQGVA       GG   K   EE   + +
Sbjct: 1  MARSFSNAKLLSAFVVDRISLAVTRRGYAAASQGVASGPVTARGGVMGKKDGEE--EATK 60

Query: 61 KSWIPDPVTGYYRPANRAVEIDVAELREIFLKQKITSH 94
           SW+PDPVTGYYRP N+A EIDVAELRE+ LK KI  H
Sbjct: 61 TSWVPDPVTGYYRPENKANEIDVAELREMLLKNKIRRH 96
[Close]
BLAST of Spo05777.1 vs. ExPASy Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.300e-15
Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQ--GVAGIGGSEKK----LTKEEIGRSA 60
          MARSL  AK+    VA+ +S++  RRGYAAA+    ++  G  EK       +E+ G S+
Sbjct: 1  MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASS 60

Query: 61 EKSWIPDPVTGYYRPANRAVEIDVAELREIFLKQKITSH 94
            +W PDP+TGYYRP NRAVEID AELRE+ L  K+ +H
Sbjct: 61 --AWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 97
[Close]
BLAST of Spo05777.1 vs. ExPASy Swiss-Prot
Match: ARG2_VIGRR (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.200e-12
Identity = 47/97 (48.45%), Postives = 59/97 (60.82%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAAS-------QGVAGIGGSEKKLTKEEIGRS 60
          MARS +N KV   LVA+  S  + R G+AAA+       +G A IGG+    + EE  R 
Sbjct: 1  MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRG 60

Query: 61 AEK-SWIPDPVTGYYRPANRAVEIDVAELREIFLKQK 90
           EK SW+PDPVTGYYRP N   EIDVA++R   L +K
Sbjct: 61 GEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVLGKK 96
[Close]
BLAST of Spo05777.1 vs. ExPASy Swiss-Prot
Match: SAG21_ARATH (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana GN=SAG21 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.100e-11
Identity = 44/96 (45.83%), Postives = 56/96 (58.33%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAA-ASQGVAGIGG-----SEKKLTKEEIGRSA 60
          MARS+SN K+    V+  +S A  RRGYAA A+QG    GG     +   + K+ +  S 
Sbjct: 1  MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEEST 60

Query: 61 EK-SWIPDPVTGYYRPANRAVEIDVAELREIFLKQK 90
          +K SW+PDP TGYYRP   + EID AELR   L  K
Sbjct: 61 QKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96
[Close]
BLAST of Spo05777.1 vs. ExPASy Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.800e-9
Identity = 37/104 (35.58%), Postives = 55/104 (52.88%), Query Frame = 1 

		  

Query: 1   MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVA----GIGGSEKKLTKEEIGRSAEK 60
           MARS+S+ K+    + + + ++  RRGY+ A         G  G+  K+ + +  + +  
Sbjct: 1   MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSS 60

Query: 61  S--------WIPDPVTGYYRPANRAVEIDVAELREIFLKQKITS 93
           S        W PDPVTGYYRP N   EID AELRE+ L  ++ S
Sbjct: 61  SETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLLNHRVRS 104
[Close]
BLAST of Spo05777.1 vs. ExPASy Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.000e-9
Identity = 37/104 (35.58%), Postives = 54/104 (51.92%), Query Frame = 1 

		  

Query: 1   MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVA--------GIGGSEKKLTKEEIG- 60
           MARS+S+ K     V + + ++  RRGY+ A              +G  E++   +E   
Sbjct: 1   MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSS 60

Query: 61  ---RSAEKSWIPDPVTGYYRPANRAVEIDVAELREIFLKQKITS 93
              R+   +W PDPVTGYYRP N   EID A+LRE+ L  ++ S
Sbjct: 61  SETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMMLNHRVRS 104
[Close]
BLAST of Spo05777.1 vs. TAIR (Arabidopsis)
Match: AT4G15910.1 (drought-induced 21)

HSP 1 Score: 72.0 bits (175), Expect = 2.200e-13
Identity = 47/101 (46.53%), Postives = 59/101 (58.42%), Query Frame = 1 

		  

Query: 2   ARSLSNA-KVFFNLVAENVSIASQ-RRGYAAASQGVAGIGGSEKKLTKEEIGR------- 61
           ARSLS A K   +  + ++S +   RR Y A SQ V   G S+   T+  +G+       
Sbjct: 3   ARSLSGAVKSLCSAASGSLSCSIVLRRSYVATSQNVTAAGLSKGGSTRVMVGKMEQRGLD 62

Query: 62  -SAEKSWIPDPVTGYYRPANRAVEIDVAELREIFLKQKITS 93
             AE +W PDPVTGYYRP+NRA EID AELRE+ LK K  S
Sbjct: 63  QEAESAWGPDPVTGYYRPSNRAAEIDPAELRELLLKNKAKS 103
[Close]
BLAST of Spo05777.1 vs. TAIR (Arabidopsis)
Match: AT4G02380.1 (senescence-associated gene 21)

HSP 1 Score: 70.5 bits (171), Expect = 6.300e-13
Identity = 44/96 (45.83%), Postives = 56/96 (58.33%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAA-ASQGVAGIGG-----SEKKLTKEEIGRSA 60
          MARS+SN K+    V+  +S A  RRGYAA A+QG    GG     +   + K+ +  S 
Sbjct: 1  MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEEST 60

Query: 61 EK-SWIPDPVTGYYRPANRAVEIDVAELREIFLKQK 90
          +K SW+PDP TGYYRP   + EID AELR   L  K
Sbjct: 61 QKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96
[Close]
BLAST of Spo05777.1 vs. TAIR (Arabidopsis)
Match: AT1G02820.1 (Late embryogenesis abundant 3 (LEA3) family protein)

HSP 1 Score: 68.2 bits (165), Expect = 3.100e-12
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 1 

		  

Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKS-WI 60
          MARSL+NAK+     +E +S A  RRG+AAA++       S  ++ K     S+EK+ W+
Sbjct: 1  MARSLANAKIQSVFGSEKLSNAVFRRGFAAAAKTALDGSVSTAEMKKRAGEASSEKAPWV 60

Query: 61 PDPVTGYYRPANRAVEIDVAELREIFLKQK 90
          PDP TGYYRP   + EID AELR I L  K
Sbjct: 61 PDPKTGYYRPETVSEEIDPAELRAILLNNK 90
The following BLAST results are available for this feature:
BLAST of Spo05777.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902204229|gb|KNA14821.1|1.2e-42100.hypothetical protein SOVF_1039... [more]
gi|731346245|ref|XP_010684355.1|1.4e-3077.1PREDICTED: late embryogenesis ... [more]
gi|310780836|gb|ADP23916.1|2.1e-2672.3late embryogenesis abundant pr... [more]
gi|374719871|gb|AEZ67462.1|8.5e-2071.4late embryogenesis abundant pr... [more]
gi|363497938|gb|AEW24432.1|1.0e-1757.1late embryogenesis abundant pr... [more]
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BLAST of Spo05777.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R5N8_SPIOL8.5e-43100.Uncharacterized protein OS=Spi... [more]
A0A0J8BXX1_BETVU9.8e-3177.1Uncharacterized protein OS=Bet... [more]
E3W6T3_SESPO1.5e-2672.3Late embryogenesis abundant pr... [more]
H6WP43_9CARY5.9e-2071.4Late embryogenesis abundant pr... [more]
G9HVM5_CAMSI7.3e-1857.1Late embryogenesis abundant pr... [more]
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BLAST of Spo05777.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
LEA5_CITSI1.3e-1548.4Late embryogenesis abundant pr... [more]
ARG2_VIGRR2.2e-1248.4Indole-3-acetic acid-induced p... [more]
SAG21_ARATH1.1e-1145.8Protein SENESCENCE-ASSOCIATED ... [more]
LEA5D_GOSHI1.8e-935.5Late embryogenesis abundant pr... [more]
LEA5A_GOSHI4.0e-935.5Late embryogenesis abundant pr... [more]
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BLAST of Spo05777.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G15910.12.2e-1346.5drought-induced 21[more]
AT4G02380.16.3e-1345.8senescence-associated gene 21[more]
AT1G02820.13.1e-1246.6Late embryogenesis abundant 3 ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004926Late embryogenesis abundant protein, LEA5-typePFAMPF03242LEA_3coord: 1..86
score: 9.9
NoneNo IPR availablePANTHERPTHR33509FAMILY NOT NAMEDcoord: 1..93
score: 1.8
NoneNo IPR availablePANTHERPTHR33509:SF5LATE EMBRYOGENESIS ABUNDANT 3 (LEA3) FAMILY PROTEINcoord: 1..93
score: 1.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006950 response to stress
biological_process GO:0007020 microtubule nucleation
biological_process GO:0050992 dimethylallyl diphosphate biosynthetic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0010015 root morphogenesis
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0008361 regulation of cell size
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0007389 pattern specification process
biological_process GO:0042545 cell wall modification
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0016132 brassinosteroid biosynthetic process
biological_process GO:0009926 auxin polar transport
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0000302 response to reactive oxygen species
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0031425 chloroplast RNA processing
biological_process GO:0010207 photosystem II assembly
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0009416 response to light stimulus
biological_process GO:1901401 regulation of tetrapyrrole metabolic process
biological_process GO:0019216 regulation of lipid metabolic process
biological_process GO:0031408 oxylipin biosynthetic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0008152 metabolic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0009902 chloroplast relocation
biological_process GO:0009821 alkaloid biosynthetic process
biological_process GO:0006103 2-oxoglutarate metabolic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0042793 plastid transcription
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0042742 defense response to bacterium
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0046856 phosphatidylinositol dephosphorylation
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0046686 response to cadmium ion
biological_process GO:0006552 leucine catabolic process
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0018874 benzoate metabolic process
biological_process GO:0010043 response to zinc ion
biological_process GO:0009744 response to sucrose
biological_process GO:0033591 response to L-ascorbic acid
biological_process GO:0046680 response to DDT
biological_process GO:0009646 response to absence of light
biological_process GO:0006554 lysine catabolic process
biological_process GO:0006013 mannose metabolic process
biological_process GO:0019853 L-ascorbic acid biosynthetic process
biological_process GO:0009298 GDP-mannose biosynthetic process
biological_process GO:0006000 fructose metabolic process
biological_process GO:0042908 xenobiotic transport
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0046251 limonene catabolic process
biological_process GO:0019482 beta-alanine metabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0030001 metal ion transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006468 protein phosphorylation
biological_process GO:0055085 transmembrane transport
biological_process GO:0006568 tryptophan metabolic process
biological_process GO:0006857 oligopeptide transport
biological_process GO:0006574 valine catabolic process
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0009507 chloroplast
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005622 intracellular
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0048046 apoplast
cellular_component GO:0016020 membrane
cellular_component GO:0009505 plant-type cell wall
molecular_function GO:0005524 ATP binding
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016887 ATPase activity
molecular_function GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0030247 polysaccharide binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0048529 magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity
molecular_function GO:0046914 transition metal ion binding
molecular_function GO:0080130 L-phenylalanine:2-oxoglutarate aminotransferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0004476 mannose-6-phosphate isomerase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0008422 beta-glucosidase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005215 transporter activity
molecular_function GO:0050321 tau-protein kinase activity
molecular_function GO:0004300 enoyl-CoA hydratase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016853 isomerase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo001990.82Barchart | Table
Spo208370.80Barchart | Table
Spo036380.80Barchart | Table
Spo179860.80Barchart | Table
Spo029790.79Barchart | Table
Spo003140.78Barchart | Table
Spo229210.78Barchart | Table
Spo236260.78Barchart | Table
Spo153080.76Barchart | Table
Spo253240.76Barchart | Table
Spo173450.76Barchart | Table
Spo206510.75Barchart | Table
Spo170440.75Barchart | Table
Spo126880.75Barchart | Table
Spo241450.74Barchart | Table
Spo016860.74Barchart | Table
Spo244250.74Barchart | Table
Spo008950.74Barchart | Table
Spo161880.74Barchart | Table
Spo217910.74Barchart | Table
Spo187020.74Barchart | Table
Spo055080.74Barchart | Table
Spo024640.74Barchart | Table
Spo046150.73Barchart | Table
Spo182310.73Barchart | Table
Spo185890.73Barchart | Table
Spo194420.73Barchart | Table
Spo178600.73Barchart | Table
Spo014480.73Barchart | Table
Spo036500.73Barchart | Table
Spo267030.73Barchart | Table
Spo115730.73Barchart | Table
Spo159490.72Barchart | Table
Spo231060.72Barchart | Table
Spo044060.72Barchart | Table
Spo053390.72Barchart | Table
Spo202220.72Barchart | Table
Spo171970.72Barchart | Table
Spo146550.71Barchart | Table
Spo104490.71Barchart | Table
Spo261460.71Barchart | Table
Spo001650.71Barchart | Table
Spo148300.71Barchart | Table
Spo093780.71Barchart | Table
Spo136400.71Barchart | Table
Spo116350.71Barchart | Table
Spo118540.71Barchart | Table
Spo100860.71Barchart | Table
Spo133560.71Barchart | Table
Spo077730.71Barchart | Table
Spo180750.71Barchart | Table
Spo129990.70Barchart | Table
Spo267900.70Barchart | Table
Spo198120.70Barchart | Table
Spo205240.70Barchart | Table
Spo222720.70Barchart | Table
Spo043000.70Barchart | Table
Spo042980.70Barchart | Table
Spo019250.70Barchart | Table
Spo190690.70Barchart | Table
Spo167890.70Barchart | Table
Spo154470.70Barchart | Table
Spo159900.70Barchart | Table
Spo230350.69Barchart | Table
Spo011350.69Barchart | Table
Spo073020.69Barchart | Table
Spo083370.69Barchart | Table
Spo089910.69Barchart | Table
Spo109900.69Barchart | Table
Spo115770.69Barchart | Table
Spo146380.69Barchart | Table
Spo172260.69Barchart | Table
Spo194310.69Barchart | Table
Spo212470.69Barchart | Table
Spo233100.69Barchart | Table
Spo233110.69Barchart | Table
Spo005290.68Barchart | Table
Spo126660.68Barchart | Table
Spo086540.68Barchart | Table
Spo194230.68Barchart | Table
Spo076030.68Barchart | Table
Spo058170.68Barchart | Table
Spo202480.68Barchart | Table
Spo208950.68Barchart | Table
Spo214840.68Barchart | Table
Spo028250.68Barchart | Table
Spo024430.68Barchart | Table
Spo012760.68Barchart | Table
Spo145580.68Barchart | Table
Spo139280.68Barchart | Table
Spo131140.68Barchart | Table
Spo251700.67Barchart | Table
Spo238540.67Barchart | Table
Spo194440.67Barchart | Table
Spo196680.67Barchart | Table
Spo096630.67Barchart | Table
Spo192590.67Barchart | Table
Spo103730.67Barchart | Table
Spo175770.67Barchart | Table
Spo043460.67Barchart | Table
Spo190170.67Barchart | Table
Spo089350.67Barchart | Table
Spo055670.67Barchart | Table
Spo116300.67Barchart | Table
Spo232580.67Barchart | Table
Spo102990.67Barchart | Table
Spo281460.67Barchart | Table
Spo040930.66Barchart | Table
Spo033350.66Barchart | Table
Spo159520.66Barchart | Table
Spo089330.66Barchart | Table
Spo234630.66Barchart | Table
Spo080090.66Barchart | Table
Spo026490.66Barchart | Table
Spo010720.66Barchart | Table
Spo061480.66Barchart | Table
Spo136450.66Barchart | Table
Spo205230.66Barchart | Table
Spo056570.66Barchart | Table
Spo212080.66Barchart | Table
Spo267390.66Barchart | Table
Spo212740.66Barchart | Table
Spo012910.66Barchart | Table
Spo049440.66Barchart | Table
Spo219660.66Barchart | Table
Spo224720.66Barchart | Table
Spo163260.66Barchart | Table
Spo112160.66Barchart | Table
Spo263480.66Barchart | Table
Spo099040.66Barchart | Table
Spo184500.66Barchart | Table
Spo050130.65Barchart | Table
Spo096380.65Barchart | Table
Spo083390.65Barchart | Table
Spo157500.65Barchart | Table
Spo015920.65Barchart | Table
Spo191390.65Barchart | Table
Spo170380.65Barchart | Table
Spo219600.65Barchart | Table