Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAATTAGTACACTAAAGTTAGAAATGGTCCCATTTAGCATTTGCTATGATTGTGGAAACAATAGCAAATGAAATAACTTCACTTTCAAGACCAATCTACTCTCCCACTACTCCCATCTTTAGCATAAAGCCACCTATATTATTTGTCCCTTTCTTTTCCTCTCTCCTAAAGTAGAAACCAATTCAACCAACCAAAAAAAAAAACCCAATTAGGGTGCTTTTTCTTTGTTTTGTTCTATTCTTAATTGAATTATTTTTGCATTTAAAACTTTACTCTCTTTTTTTCTTCCCTTAATCTCTTCTTCTAAAAAGGAAATTAGTACACTAATCATGAAAAACATGAAGAAGGTGTTCGTTTGTTTAGGCATGGGTTCATGTGTTTCTACCAAAACTGTTGAACCTCCTTCTAATCTCACCTTGGAAAAAGCACTCGATTCTGCTCAATCCCCTGTTTGGGAACTTCCAGGTAATTTTTATTCTTTTGGGTGTACTATCCGGTCATCCGGTTCACCCTTAGAGCTAATCCGGATTCGGGACGAGTTCTGAGTGGTTAAGTTCCATTCCCCTCCCAGTTGTTGTTGCGGGGATCGAACACGGGTCCTCCCTACCAAGTTCAGCCTCAATCACCACTGAAACAACAATCAATTGGTTAATTGATCAACTAAATTGAGTTCCAGTGTATGATATTTGAAAAAAGAATTAGTATAAGGAAAAGTTGGTTGTTTTCTTTTGGTAGGATTAATTAGCTGGCATGATCATGATAATTAGTGAGCTTAATCATAGTGTTTAATTCTTTATGAATTATGAAGTTGCAGGTAGTAAAGAGGAAGCCTTTTTTGATTCGAAGCCTTGGCTAGAGTCGGATGATGAACAAGATTTCTATAGCGTCAATGGTGGTAAGAACAACATCAATTACAAGAATAATGATTACATTGATTTTTTGAATTTTTTTTTAGATTATACAAAATTCATGCTTAATTCGTATAGTATATAGTCAGATTTTTTATTCATACCCTTTTTTTTTTGGTGAGGAGAAAATACCCGAGTTGATTTTTATTGGTATGTTATAATCTATTACTCCGGAGTAGTGTTTATGCACGTGATGCATGCGTGACATTTTATAAGAATATCATAAAGTATAATAGGATTGTTTTTCCATTTTAGAAAATTTTAACAGTTTATTAAGGTATTACAGGAACTTCAATAGAGAGACACGAAGTCCTCAAATGTTGCCTTATAAAACAAGGTTTTTTAGGGAAAAGTTAGTTATAATCTTATACTTTGTATAATAGAGTTTAACGTGACATGAATTAGAGAAGTTGTATCTACTACTCGAACTATCAATACATAAAGTGCTAATCAAGCTCCTTGATATGATTTTTTCGTCAATCAAGGAGCTTGATTAGCAATTTAAATGACATTTTCGAAAATAAATCGGAAAATTAAATATAAAGTATTTTCTTTTCTTCTATTTATTTTTATTTTCTTTAAAATCGATTAGACATTTAGACTGTATATTGCTAGAAATTTTTCGCCAATCAAGAAGATTGACTAGGCAACCCTGTATTAATATGCCTGTGGAATAAGGAAAATCACAAGTTAGTTACTTAGTGGACCCACTTTTGCTAGACAAGACAAAAAGTTTAGGTAGGTTAGTTATCGGTTCATCATAAATTAGTAGGCAAAATAGTTTTTTTTTTAGGTAAGTTGATATTTTAGGAATATTTTGAACTAGAAACTACTACAAGTGCCAACTACCAAGTGTTTTTGATTGAAATCCCTTCATTTTAGTTCAAATACTTGTGTTAGATATTCAGGCTCATTTTAAACTATAATTATAAAATTTGTAAAATAATAAATCGGACAATTGAATACGTATTCATGTCAGACACGAGTATTAGGGGAGAAGAAGTGATAGATTATGGATGTCTGGATGATATTTTTCTATGGGTAGATATTGGATTACACAATGATTGATCCTGCTAAAAGGGGTATGAATGGTGAATGATCATTGCGGATACCCCCTTATTTCATTCATTTAAGAGGCCCACCTTGTCACTTATAAGTCAAAGTAGTGTAAATTCAGCAAATTGACATGAATTGGGCCTAGCCACAGGCCCACAGGCCCACAGCCCACAATATTGAAGTTGTAGGACGATATTTAAGGTCGTTAATAATGTCCATGTGCATAAATACATACGAAGTACTACGTACAAAGTACAAAGTACAAAGTACTCCGTACTATATAGGGCCTCTATACATGGGTGTGTCATGCACAAACACACACACTCTGTATCACAAAAAACAAACATACTCCGTATATGACATGTTTGGTAATTTGCGGTTAACTTGTTTGACTAGCTGTTAGATATTACTTTGTATTAGCTGGTTTGGTTAGTTGGTCGAATTAGCTGCTTATATAAAGTGTTTGACAAATGAGCCGTTAGTTGCTTCATGGTTAAAATGAAAATTATAAACATTGATATAAAATGACGTAGGTACTAGGTAGGTAAGAGTTGTAATTTGTCATTTACTACTAATTCTTCAAACCCTCAATTTGAAAAGGCTCTTATATTGAACTTTTTTCAAAATTAGCTTTTTCATCTCAAAACTCTCCCAACTAAACACTCCCTTCGACTTTTTAAAATGGGACAAACCTAAACTACTTTTTTTTTTCCAAACCTCTCATAGTCAAACACCCCCTATATACTCTCTAGTAGGGGTGTATAGCTCATTAATTAGTTAGCACCTCTATCTTATACCTTGGTGTAGAATATCATGCACACGCTAAAGTGCATGTTATTTTTGTTTATTTATTTATTAAATAGCTACAAGGTCTTAACAGGGGCTTATGTCATTGTTGTACCAATGGTGGGCTATCTGCTCACATGTTCATTTTTTTGTGAGCAGGTCCTTTTTAAACCATTGGAGTTGCTCTAACACCATTTTAATTAATCATGATGTTCAGATATCCCGCCATATAGGCAATCGGATAAGAATGGAGATGACCACGAAGGAAGGAGGCTATCCGAACTATTCAAAGAAAGTAGCTTTAATAGCGAAAGCCAAACAAGTGCGAAAGCAAGAAGTGAAGCGAAAGGAAAAGACGATGAAGAAATACCAACATTTGCAAATACTCCTAGTAAAATTGAGAATGGGAAATCTGGTAGATCTGTTAATCGTTGTTTGCCAAGTTTAGTTAGAAGTTTAAGTTGTGGTGATCGTAAAAAGAGGCCAAATCCTGCCCATATTGCTGTTGTGGGTTGATGGAGTTTTTTATGGTACTGTATTTATTTTTATGCGGATGAGCCACACGGGCAATATAAATTACAAATGGATGATGGATGATGGATGATGGATGATGGATGATGGATTCAAATCGGTGTACACAAGGCTACTAGTCCTGAATTTTAACCACTAGACCAAGAGTTTATTGGTCGGTTGATGGGTCTATAAGCAGTTTGCCTTTAGTAGGTTGATATAAATGGCAATTGTAAAGAGTAGTAAGTTATTTATGAGAGTAAGAGGAGTGTTTAATTTATTTGAGATCTTGTCAATACATATTTAAAATAATAAATCAATATATATAATGCTAATCAAATGTAAATTTCACTTTGTTTTAGTTATATAAAATGTTTCGTAAAATTAAATTTAAAGG TGAATTAGTACACTAAAGTTAGAAATGGTCCCATTTAGCATTTGCTATGATTGTGGAAACAATAGCAAATGAAATAACTTCACTTTCAAGACCAATCTACTCTCCCACTACTCCCATCTTTAGCATAAAGCCACCTATATTATTTGTCCCTTTCTTTTCCTCTCTCCTAAAGTAGAAACCAATTCAACCAACCAAAAAAAAAAACCCAATTAGGGTGCTTTTTCTTTGTTTTGTTCTATTCTTAATTGAATTATTTTTGCATTTAAAACTTTACTCTCTTTTTTTCTTCCCTTAATCTCTTCTTCTAAAAAGGAAATTAGTACACTAATCATGAAAAACATGAAGAAGGTGTTCGTTTGTTTAGGCATGGGTTCATGTGTTTCTACCAAAACTGTTGAACCTCCTTCTAATCTCACCTTGGAAAAAGCACTCGATTCTGCTCAATCCCCTGTTTGGGAACTTCCAGGTAGTAAAGAGGAAGCCTTTTTTGATTCGAAGCCTTGGCTAGAGTCGGATGATGAACAAGATTTCTATAGCGTCAATGGTGATATCCCGCCATATAGGCAATCGGATAAGAATGGAGATGACCACGAAGGAAGGAGGCTATCCGAACTATTCAAAGAAAGTAGCTTTAATAGCGAAAGCCAAACAAGTGCGAAAGCAAGAAGTGAAGCGAAAGGAAAAGACGATGAAGAAATACCAACATTTGCAAATACTCCTAGTAAAATTGAGAATGGGAAATCTGGTAGATCTGTTAATCGTTGTTTGCCAAGTTTAGTTAGAAGTTTAAGTTGTGGTGATCGTAAAAAGAGGCCAAATCCTGCCCATATTGCTGTTGTGGGTTGATGGAGTTTTTTATGGTACTGTATTTATTTTTATGCGGATGAGCCACACGGGCAATATAAATTACAAATGGATGATGGATGATGGATGATGGATGATGGATGATGGATTCAAATCGGTGTACACAAGGCTACTAGTCCTGAATTTTAACCACTAGACCAAGAGTTTATTGGTCGGTTGATGGGTCTATAAGCAGTTTGCCTTTAGTAGGTTGATATAAATGGCAATTGTAAAGAGTAGTAAGTTATTTATGAGAGTAAGAGGAGTGTTTAATTTATTTGAGATCTTGTCAATACATATTTAAAATAATAAATCAATATATATAATGCTAATCAAATGTAAATTTCACTTTGTTTTAGTTATATAAAATGTTTCGTAAAATTAAATTTAAAGG ATGAAAAACATGAAGAAGGTGTTCGTTTGTTTAGGCATGGGTTCATGTGTTTCTACCAAAACTGTTGAACCTCCTTCTAATCTCACCTTGGAAAAAGCACTCGATTCTGCTCAATCCCCTGTTTGGGAACTTCCAGGTAGTAAAGAGGAAGCCTTTTTTGATTCGAAGCCTTGGCTAGAGTCGGATGATGAACAAGATTTCTATAGCGTCAATGGTGATATCCCGCCATATAGGCAATCGGATAAGAATGGAGATGACCACGAAGGAAGGAGGCTATCCGAACTATTCAAAGAAAGTAGCTTTAATAGCGAAAGCCAAACAAGTGCGAAAGCAAGAAGTGAAGCGAAAGGAAAAGACGATGAAGAAATACCAACATTTGCAAATACTCCTAGTAAAATTGAGAATGGGAAATCTGGTAGATCTGTTAATCGTTGTTTGCCAAGTTTAGTTAGAAGTTTAAGTTGTGGTGATCGTAAAAAGAGGCCAAATCCTGCCCATATTGCTGTTGTGGGTTGA MKNMKKVFVCLGMGSCVSTKTVEPPSNLTLEKALDSAQSPVWELPGSKEEAFFDSKPWLESDDEQDFYSVNGDIPPYRQSDKNGDDHEGRRLSELFKESSFNSESQTSAKARSEAKGKDDEEIPTFANTPSKIENGKSGRSVNRCLPSLVRSLSCGDRKKRPNPAHIAVVG Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05884.1 vs. NCBI nr
Match: gi|902216984|gb|KNA17576.1| (hypothetical protein SOVF_078120 [Spinacia oleracea]) HSP 1 Score: 334.3 bits (856), Expect = 1.200e-88 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1
BLAST of Spo05884.1 vs. NCBI nr
Match: gi|731343262|ref|XP_010682806.1| (PREDICTED: uncharacterized protein At3g27210-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 235.7 bits (600), Expect = 5.900e-59 Identity = 122/170 (71.76%), Postives = 141/170 (82.94%), Query Frame = 1
BLAST of Spo05884.1 vs. NCBI nr
Match: gi|870855771|gb|KMT07487.1| (hypothetical protein BVRB_6g151040 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 219.5 bits (558), Expect = 4.400e-54 Identity = 114/158 (72.15%), Postives = 130/158 (82.28%), Query Frame = 1
BLAST of Spo05884.1 vs. NCBI nr
Match: gi|848853595|ref|XP_012844326.1| (PREDICTED: uncharacterized protein At3g27210-like isoform X1 [Erythranthe guttata]) HSP 1 Score: 66.6 bits (161), Expect = 4.700e-8 Identity = 55/155 (35.48%), Postives = 75/155 (48.39%), Query Frame = 1
BLAST of Spo05884.1 vs. NCBI nr
Match: gi|848853597|ref|XP_012844331.1| (PREDICTED: uncharacterized protein At3g27210-like isoform X2 [Erythranthe guttata]) HSP 1 Score: 66.2 bits (160), Expect = 6.200e-8 Identity = 59/171 (34.50%), Postives = 83/171 (48.54%), Query Frame = 1
BLAST of Spo05884.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RDH0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_078120 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 8.500e-89 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1
BLAST of Spo05884.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C1Z1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g151040 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 3.000e-54 Identity = 114/158 (72.15%), Postives = 130/158 (82.28%), Query Frame = 1
BLAST of Spo05884.1 vs. UniProtKB/TrEMBL
Match: A0A022S2A0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013394mg PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 4.300e-8 Identity = 59/171 (34.50%), Postives = 83/171 (48.54%), Query Frame = 1
BLAST of Spo05884.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HFV3_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 9.600e-8 Identity = 62/203 (30.54%), Postives = 85/203 (41.87%), Query Frame = 1
BLAST of Spo05884.1 vs. UniProtKB/TrEMBL
Match: K4BDS7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.300e-7 Identity = 68/203 (33.50%), Postives = 87/203 (42.86%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05884.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05884.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05884.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo05884.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
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