Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTTTCAATCGGTCGGGTCCAAAACGGGTTCGGTCGGATTTTGACCCATTCCTTTTCGGATTGCTCGGGTTCGTATAAAACGAATTACGGGTCACAAAATCTTGTTTAGGATCCAGTGGCAGTATTTTCGGGTCAGGTTCGGATCGGTTTTCGGATCGGGTCGATTTTTGACAGCTCTAGGTAGTGCCGTCCTTCTCCCTATTCACGCCAATCACCCCGCACATCGCATCCCAATCCCGCAATAACGCCGCACACTCGTTCGTACTTCGTAGCATAAGTACTTCGCAGTTCACTGCATAACTCCTTACCTCTTAGATACTTAGATCTAACTATCTAACTTCCCTTCTCTCTCTCTCTGTCTCTCAAATAATGGCACGCAGCAAAACCCAAAAACCCTTAACAGAGGACCCACCGGAGGCGGACTCCTCCGAAGAGGTCACCGGCTCTTCTTCCTCCGGCGAAGAAGGCGAAGAACCCGAGGAAGAAGTCTCCAACACTGGTTCCTCCTCCGGCGAAGAGGAGGAAGAAGAAACCCCATCAACCCCTGTACCACCGCCTTCCTTCAAGAAAATCCCTCTTTCCGCCGCCGCCACTAAGAGACCCCTCTCCGAGGATGACTTCGACGATGATACCAGCGACGATTCACCGTTGCACACCTTAAAGTCTGCCTCAAAGCCCGCCATTGAAACCCCTTCTAAGCCCAGATCTAAGTCTACCGTCGCCGCCGAGAAACGCCCATCGGAGACAGAACTCAAGACGTCTTCTAAAAAACCGAGAAAAGAGAAATTAGTAAGTGGGGCCGCTCCTGCTGCTGCTGCTTCCCCTGTCGTTCACGAAGAGGCTTCAAAGAAGCTGTTTCAGAGGGTGTTTAGTGAAGGCGATGAAATTGAGATTCTGAAAGGTATGATTGAATATAGGGCTAAAAGAGGGGCTGACCCTATGGTTGAAATTGATGATTTTTATGGGTTTGTGAAAAAATCTGTGCATGTTGATGTTAATAAAGGTCAAATTGTTGATAAAGTCCGTAGGCTTAAAAAGAAGTTCTTTAATGCTAAGAAGAAGAAGCTCAATAACCCTCATGAAATTCATGCTTTTGAATTGTCTAAAAAGATTTGGGATATTAATGGAGGTGATGATGTTATGGAGGATGACAAGATAAACAATGTGACTATTGCTGAATATAATAACAATCACAACAATAATGTTGGGTCGAAACCGAACTCCAAACCTAGGGTTCTGAAGCTTAAAACCAAAGTTGGTGTTGGTGTTGGTGGTGGCGGTGGTGGTGGTGGTATTAGTAGTGGTAATGGGGTTGTTGTTATGGAGGATAACGAGGGCGAAAAGGGTGGTGGAAAGGTGTCTGACATTGTTGAGAAAGATGTTGAGTTTGAGGTTGGAGAAGCTGTAGCTTGGGAGAAGTTGAGGAAGAGAGGTTTGACAATGATGGGAGCGAAGGCGAGGGCCGAGATTGATGAGATGTGGGAGAAGGTAGCAATGAAGCAAGCTGAGGCGAAGATCATGCGTTCTGAAGTTGAACGAGAAGAGACTAGGAGGATTATGGAAGCTCTTAGGTCTGGTAAGAATTAG ATGATTTTCAATCGGTCGGGTCCAAAACGGGTTCGGTCGGATTTTGACCCATTCCTTTTCGGATTGCTCGGATCTAACTATCTAACTTCCCTTCTCTCTCTCTCTGTCTCTCAAATAATGGCACGCAGCAAAACCCAAAAACCCTTAACAGAGGACCCACCGGAGGCGGACTCCTCCGAAGAGGTCACCGGCTCTTCTTCCTCCGGCGAAGAAGGCGAAGAACCCGAGGAAGAAGTCTCCAACACTGGTTCCTCCTCCGGCGAAGAGGAGGAAGAAGAAACCCCATCAACCCCTGTACCACCGCCTTCCTTCAAGAAAATCCCTCTTTCCGCCGCCGCCACTAAGAGACCCCTCTCCGAGGATGACTTCGACGATGATACCAGCGACGATTCACCGTTGCACACCTTAAAGTCTGCCTCAAAGCCCGCCATTGAAACCCCTTCTAAGCCCAGATCTAAGTCTACCGTCGCCGCCGAGAAACGCCCATCGGAGACAGAACTCAAGACGTCTTCTAAAAAACCGAGAAAAGAGAAATTAGTAAGTGGGGCCGCTCCTGCTGCTGCTGCTTCCCCTGTCGTTCACGAAGAGGCTTCAAAGAAGCTGTTTCAGAGGGTGTTTAGTGAAGGCGATGAAATTGAGATTCTGAAAGGTATGATTGAATATAGGGCTAAAAGAGGGGCTGACCCTATGGTTGAAATTGATGATTTTTATGGGTTTGTGAAAAAATCTGTGCATGTTGATGTTAATAAAGGTCAAATTGTTGATAAAGTCCGTAGGCTTAAAAAGAAGTTCTTTAATGCTAAGAAGAAGAAGCTCAATAACCCTCATGAAATTCATGCTTTTGAATTGTCTAAAAAGATTTGGGATATTAATGGAGGTGATGATGTTATGGAGGATGACAAGATAAACAATGTGACTATTGCTGAATATAATAACAATCACAACAATAATGTTGGGTCGAAACCGAACTCCAAACCTAGGGTTCTGAAGCTTAAAACCAAAGTTGGTGTTGGTGTTGGTGGTGGCGGTGGTGGTGGTGGTATTAGTAGTGGTAATGGGGTTGTTGTTATGGAGGATAACGAGGGCGAAAAGGGTGGTGGAAAGGTGTCTGACATTGTTGAGAAAGATGTTGAGTTTGAGGTTGGAGAAGCTGTAGCTTGGGAGAAGTTGAGGAAGAGAGGTTTGACAATGATGGGAGCGAAGGCGAGGGCCGAGATTGATGAGATGTGGGAGAAGGTAGCAATGAAGCAAGCTGAGGCGAAGATCATGCGTTCTGAAGTTGAACGAGAAGAGACTAGGAGGATTATGGAAGCTCTTAGGTCTGGTAAGAATTAG ATGATTTTCAATCGGTCGGGTCCAAAACGGGTTCGGTCGGATTTTGACCCATTCCTTTTCGGATTGCTCGGATCTAACTATCTAACTTCCCTTCTCTCTCTCTCTGTCTCTCAAATAATGGCACGCAGCAAAACCCAAAAACCCTTAACAGAGGACCCACCGGAGGCGGACTCCTCCGAAGAGGTCACCGGCTCTTCTTCCTCCGGCGAAGAAGGCGAAGAACCCGAGGAAGAAGTCTCCAACACTGGTTCCTCCTCCGGCGAAGAGGAGGAAGAAGAAACCCCATCAACCCCTGTACCACCGCCTTCCTTCAAGAAAATCCCTCTTTCCGCCGCCGCCACTAAGAGACCCCTCTCCGAGGATGACTTCGACGATGATACCAGCGACGATTCACCGTTGCACACCTTAAAGTCTGCCTCAAAGCCCGCCATTGAAACCCCTTCTAAGCCCAGATCTAAGTCTACCGTCGCCGCCGAGAAACGCCCATCGGAGACAGAACTCAAGACGTCTTCTAAAAAACCGAGAAAAGAGAAATTAGTAAGTGGGGCCGCTCCTGCTGCTGCTGCTTCCCCTGTCGTTCACGAAGAGGCTTCAAAGAAGCTGTTTCAGAGGGTGTTTAGTGAAGGCGATGAAATTGAGATTCTGAAAGGTATGATTGAATATAGGGCTAAAAGAGGGGCTGACCCTATGGTTGAAATTGATGATTTTTATGGGTTTGTGAAAAAATCTGTGCATGTTGATGTTAATAAAGGTCAAATTGTTGATAAAGTCCGTAGGCTTAAAAAGAAGTTCTTTAATGCTAAGAAGAAGAAGCTCAATAACCCTCATGAAATTCATGCTTTTGAATTGTCTAAAAAGATTTGGGATATTAATGGAGGTGATGATGTTATGGAGGATGACAAGATAAACAATGTGACTATTGCTGAATATAATAACAATCACAACAATAATGTTGGGTCGAAACCGAACTCCAAACCTAGGGTTCTGAAGCTTAAAACCAAAGTTGGTGTTGGTGTTGGTGGTGGCGGTGGTGGTGGTGGTATTAGTAGTGGTAATGGGGTTGTTGTTATGGAGGATAACGAGGGCGAAAAGGGTGGTGGAAAGGTGTCTGACATTGTTGAGAAAGATGTTGAGTTTGAGGTTGGAGAAGCTGTAGCTTGGGAGAAGTTGAGGAAGAGAGGTTTGACAATGATGGGAGCGAAGGCGAGGGCCGAGATTGATGAGATGTGGGAGAAGGTAGCAATGAAGCAAGCTGAGGCGAAGATCATGCGTTCTGAAGTTGAACGAGAAGAGACTAGGAGGATTATGGAAGCTCTTAGGTCTGGTAAGAATTAG MIFNRSGPKRVRSDFDPFLFGLLGSNYLTSLLSLSVSQIMARSKTQKPLTEDPPEADSSEEVTGSSSSGEEGEEPEEEVSNTGSSSGEEEEEETPSTPVPPPSFKKIPLSAAATKRPLSEDDFDDDTSDDSPLHTLKSASKPAIETPSKPRSKSTVAAEKRPSETELKTSSKKPRKEKLVSGAAPAAAASPVVHEEASKKLFQRVFSEGDEIEILKGMIEYRAKRGADPMVEIDDFYGFVKKSVHVDVNKGQIVDKVRRLKKKFFNAKKKKLNNPHEIHAFELSKKIWDINGGDDVMEDDKINNVTIAEYNNNHNNNVGSKPNSKPRVLKLKTKVGVGVGGGGGGGGISSGNGVVVMEDNEGEKGGGKVSDIVEKDVEFEVGEAVAWEKLRKRGLTMMGAKARAEIDEMWEKVAMKQAEAKIMRSEVEREETRRIMEALRSGKN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05967.1 vs. NCBI nr
Match: gi|902209212|gb|KNA16147.1| (hypothetical protein SOVF_091830 [Spinacia oleracea]) HSP 1 Score: 742.3 bits (1915), Expect = 5.000e-211 Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 1
BLAST of Spo05967.1 vs. NCBI nr
Match: gi|902038529|gb|KNA02725.1| (hypothetical protein SOVF_215960, partial [Spinacia oleracea]) HSP 1 Score: 465.7 bits (1197), Expect = 9.100e-128 Identity = 269/319 (84.33%), Postives = 279/319 (87.46%), Query Frame = 1
BLAST of Spo05967.1 vs. NCBI nr
Match: gi|731351234|ref|XP_010686932.1| (PREDICTED: mediator-associated protein 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 305.1 bits (780), Expect = 2.100e-79 Identity = 217/412 (52.67%), Postives = 274/412 (66.50%), Query Frame = 1
BLAST of Spo05967.1 vs. NCBI nr
Match: gi|902042628|gb|KNA02774.1| (hypothetical protein SOVF_215480, partial [Spinacia oleracea]) HSP 1 Score: 167.2 bits (422), Expect = 6.700e-38 Identity = 100/112 (89.29%), Postives = 103/112 (91.96%), Query Frame = 1
BLAST of Spo05967.1 vs. NCBI nr
Match: gi|590611745|ref|XP_007022191.1| (DNA-binding storekeeper protein-related transcriptional regulator, putative [Theobroma cacao]) HSP 1 Score: 156.0 bits (393), Expect = 1.500e-34 Identity = 151/425 (35.53%), Postives = 212/425 (49.88%), Query Frame = 1
BLAST of Spo05967.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBK2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_091830 PE=4 SV=1) HSP 1 Score: 742.3 bits (1915), Expect = 3.500e-211 Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 1
BLAST of Spo05967.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q6Q3_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_215960 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 6.300e-128 Identity = 269/319 (84.33%), Postives = 279/319 (87.46%), Query Frame = 1
BLAST of Spo05967.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVC8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g186660 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 1.400e-79 Identity = 217/412 (52.67%), Postives = 274/412 (66.50%), Query Frame = 1
BLAST of Spo05967.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q6T1_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_215480 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 4.700e-38 Identity = 100/112 (89.29%), Postives = 103/112 (91.96%), Query Frame = 1
BLAST of Spo05967.1 vs. UniProtKB/TrEMBL
Match: A0A061F9M7_THECC (DNA-binding storekeeper protein-related transcriptional regulator, putative OS=Theobroma cacao GN=TCM_032355 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 1.100e-34 Identity = 151/425 (35.53%), Postives = 212/425 (49.88%), Query Frame = 1
BLAST of Spo05967.1 vs. ExPASy Swiss-Prot
Match: MDA1_ARATH (Mediator-associated protein 1 OS=Arabidopsis thaliana GN=At4g25210 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 8.500e-9 Identity = 121/426 (28.40%), Postives = 178/426 (41.78%), Query Frame = 1
BLAST of Spo05967.1 vs. TAIR (Arabidopsis)
Match: AT1G44810.1 (DNA-binding storekeeper protein-related transcriptional regulator) HSP 1 Score: 83.2 bits (204), Expect = 4.500e-16 Identity = 87/255 (34.12%), Postives = 133/255 (52.16%), Query Frame = 1
BLAST of Spo05967.1 vs. TAIR (Arabidopsis)
Match: AT4G00390.1 (DNA-binding storekeeper protein-related transcriptional regulator) HSP 1 Score: 75.5 bits (184), Expect = 9.300e-14 Identity = 94/291 (32.30%), Postives = 136/291 (46.74%), Query Frame = 1
BLAST of Spo05967.1 vs. TAIR (Arabidopsis)
Match: AT1G61730.1 (DNA-binding storekeeper protein-related transcriptional regulator) HSP 1 Score: 73.9 bits (180), Expect = 2.700e-13 Identity = 120/416 (28.85%), Postives = 198/416 (47.60%), Query Frame = 1
BLAST of Spo05967.1 vs. TAIR (Arabidopsis)
Match: AT3G04930.1 (DNA-binding storekeeper protein-related transcriptional regulator) HSP 1 Score: 68.6 bits (166), Expect = 1.100e-11 Identity = 84/299 (28.09%), Postives = 139/299 (46.49%), Query Frame = 1
BLAST of Spo05967.1 vs. TAIR (Arabidopsis)
Match: AT2G01370.1 (DNA-binding storekeeper protein-related transcriptional regulator) HSP 1 Score: 68.6 bits (166), Expect = 1.100e-11 Identity = 43/136 (31.62%), Postives = 67/136 (49.26%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05967.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05967.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05967.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo05967.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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