Spo06002 (gene)

Overview
NameSpo06002
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHCP-like superfamily protein with MYND-type zinc finger
Locationchr1 : 48581502 .. 48583971 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAACTAGAAGAGGACTCTGTTATCCGAAAGTTCATGCTTCCGCCACAACCACCGCCACCATGACTCTCTCTTTTCTTAAGAATAAGCAGATGAAGGTGACGGTGAGGAAGAGGAGTAATGATAACAGAGCTTTTGTTAATGGCGGCGGCGGCGACGATAAAAAGAGATCGTTGTTGTTGCCGGAAAATGAGAAAAACGATTTTGTTTTTACTAGTTTTGATAAAGTAGACAGAGTTCCTTGCCGGAAAAGAGCGAGAATCTCGTCGGAGTTTACAGCCGGCGGTTCGGATTTCTTCGACGGGTTGCCGGACGATCTCGTCGTTTCTATTCTGTGCAAGCTCAGTTCTACCGCTTCTTGTCCTGCCGATTTTGTCAACGTTCTCTTAACGTATGTGTTGCCTATTCTCTCTCCCCCTCTGTGTATTTTCTCCTCTGAAATTCTGGAAACAATTGAAAATTCATGACCTAAAAATTGATTTTGTAACAGTTGCAAGAGATTCAACGGATTAGGTCTTAATTCAATGGTGTTATCGAAAGCTTCTCCGAAAACATTCGCCATTAAAGCTAAGAATTGGTCTGAATCTTCTCATCGCTTCCTAAGATCCTGCTCCGACTCCGGAAATGTCGAAGCTTGCTACACTCTCGGCATGGTAATTATCTCTTCTCCAAAAAAAACATTTGATTTTATTTCCAATTTTTCCTCCAATGATTTTTCTCAAAAAAACAGAAATACCGGAAAAAATTGATTTATTTCCTAACTTTTCTCCAACTATTTTTCTCAAAAAAATCAGCAAATTCCTAATTTTCTCTAATTTATTGTAATTTTATGAATTTTAGCAATAAATAATTGCTGAAAATGTTATGGTTTCCGTTGAACAGATTCGATTCTACTGTTTACAAAACCGAGGAAGCGGAGCGTCACTAATGGCTAAAGCAGCGATTAACTCTCACGCGCAAGCTCTCTACTCCTTAGCGGTGATCCAATTCAATGGAAGCGGAGGAACAAAGAGTGACAAAGACCTACGCGCAGGAGTCGCGTTATGTGCACGTGCCGCCTTCTTAGGCCACGTAGACGCCCTCCGCGAGCTCGGCCACTGCCTACAAGACGGATACGGCGTCCGCCAAAACGTCGCCGAAGGGCGTCGTTTCCTTGTTCAGGCCAACGCTCGTGAGCTCGCCGCCGCTCTCACGTGCTCCACCTCAGCTTCCTCCTATATTGTCTCATCTCAGCCAGTTGGAAACCGCCTTGTGTCAACCACCACCGGAACAATCGGTTGTCCTTTGCTGAGTGACTTCGGTTGTAATGTTCCGGCACCGGAAGGTCACCCGGCGAATCAGTTCTTAACCGAATGGTTTACCGGTCGGACCAGTGAAAATCCTGGACCGGGATTAAGGCTTTGTTCTCACGCCGGGTGCGGTAGACCGGAGACACGTAAGCACGAATTTCGACGGTGTTCAGTTTGCGGTGCCGTGAATTACTGTTCGCGTGCTTGTCAAGCGCTTGATTGGAAGTTGAGGCATAAGGGTGACTGCGCTCCTATGCCTAGGTGGGTTGAAGTTGATGAAGAAAACATTAACGCCGGTGACGTTAACGGTAACGATGTTAATAACGGAGACGCTGATATAAACGCTATGGAAATGGATGAGGACAGTTAACGGTGGACTGTGACTGTGACGGCCAACGGCCCGCCACATGAGTTTTTTGGTTGGGGTTGGAGATTTCATTTCCGGTTAAAGAAGAAAGAAAATGGAACAGTAAAAATGGTCATATTTCGGAAATTTTGCCGTATTTTAGCATTTTAGTAGGAAATTAGTTTGCAAAATGAGAAAGGTGGGGAATTAATTTTTAAATTTTTTATTTTATAATTTGGATGAAGGGTAAAGGGGTGTAGGAACTTTAATTTGGACTTGGGTGTTAATCTTTGGAAAAGAATCGAAAATGAATTTAGTTTTTTTTTTCTCCATTTGTGGAGAAATTTTTATTTTTTATGTATAGAGAAAAGGGATTAGTTCCCTATTGCGGAAATGATGTACGGAGTAGTTTTTTTTAAGCTAATTATTTGGCTTAATTACAAAAATTTCAATCAACAACTACATAGTCTACTACCTTGTCTTTTGTACTTAATTTATTTCATTTTTTCTTATAGAAAAATATGTAGTTATATTTTATTTTCGAGTTTTAAAAAATTAGTTGAAATAGTTGTGGATGTCACGTTGTAGTTAATGGTTTCTATGTGAGAAAATGGAGAAAATATTAGGTAAGTGGATTGGGATGAATTACCAAACAGGAAATTTGCTTAAGACCGCCATTTAACTTTGAGGGAAAGAGAAGTTATTAGTTTCTTCACTTCTTTAGCTTAATTGCTACAATAAGCTTGAAAATGTTTATAATTTCTAAATGGATTAAACACATGATATTAGGAATCGAGAAAAGAGAAAAGGATAAGTAAATAAAAAAGCACGGGT

mRNA sequence

ATGAGAACTAGAAGAGGACTCTGTTATCCGAAAGTTCATGCTTCCGCCACAACCACCGCCACCATGACTCTCTCTTTTCTTAAGAATAAGCAGATGAAGGTGACGGTGAGGAAGAGGAGTAATGATAACAGAGCTTTTGTTAATGGCGGCGGCGGCGACGATAAAAAGAGATCGTTGTTGTTGCCGGAAAATGAGAAAAACGATTTTGTTTTTACTAGTTTTGATAAAGTAGACAGAGTTCCTTGCCGGAAAAGAGCGAGAATCTCGTCGGAGTTTACAGCCGGCGGTTCGGATTTCTTCGACGGGTTGCCGGACGATCTCGTCGTTTCTATTCTGTGCAAGCTCAGTTCTACCGCTTCTTGTCCTGCCGATTTTGTCAACGTTCTCTTAACTTGCAAGAGATTCAACGGATTAGGTCTTAATTCAATGGTGTTATCGAAAGCTTCTCCGAAAACATTCGCCATTAAAGCTAAGAATTGGTCTGAATCTTCTCATCGCTTCCTAAGATCCTGCTCCGACTCCGGAAATGTCGAAGCTTGCTACACTCTCGGCATGATTCGATTCTACTGTTTACAAAACCGAGGAAGCGGAGCGTCACTAATGGCTAAAGCAGCGATTAACTCTCACGCGCAAGCTCTCTACTCCTTAGCGGTGATCCAATTCAATGGAAGCGGAGGAACAAAGAGTGACAAAGACCTACGCGCAGGAGTCGCGTTATGTGCACGTGCCGCCTTCTTAGGCCACGTAGACGCCCTCCGCGAGCTCGGCCACTGCCTACAAGACGGATACGGCGTCCGCCAAAACGTCGCCGAAGGGCGTCGTTTCCTTGTTCAGGCCAACGCTCGTGAGCTCGCCGCCGCTCTCACGTGCTCCACCTCAGCTTCCTCCTATATTGTCTCATCTCAGCCAGTTGGAAACCGCCTTGTGTCAACCACCACCGGAACAATCGGTTGTCCTTTGCTGAGTGACTTCGGTTGTAATGTTCCGGCACCGGAAGGTCACCCGGCGAATCAGTTCTTAACCGAATGGTTTACCGGTCGGACCAGTGAAAATCCTGGACCGGGATTAAGGCTTTGTTCTCACGCCGGGTGCGGTAGACCGGAGACACGTAAGCACGAATTTCGACGGTGTTCAGTTTGCGGTGCCGTGAATTACTGTTCGCGTGCTTGTCAAGCGCTTGATTGGAAGTTGAGGCATAAGGGTGACTGCGCTCCTATGCCTAGGTGGGTTGAAGTTGATGAAGAAAACATTAACGCCGGTGACGTTAACGGTAACGATGTTAATAACGGAGACGCTGATATAAACGCTATGGAAATGGATGAGGACAGTTAACGGTGGACTGTGACTGTGACGGCCAACGGCCCGCCACATGAGTTTTTTGGTTGGGGTTGGAGATTTCATTTCCGGTTAAAGAAGAAAGAAAATGGAACAGTAAAAATGGTCATATTTCGGAAATTTTGCCGTATTTTAGCATTTTAGTAGGAAATTAGTTTGCAAAATGAGAAAGGTGGGGAATTAATTTTTAAATTTTTTATTTTATAATTTGGATGAAGGGTAAAGGGGTGTAGGAACTTTAATTTGGACTTGGGTGTTAATCTTTGGAAAAGAATCGAAAATGAATTTAGTTTTTTTTTTCTCCATTTGTGGAGAAATTTTTATTTTTTATGTATAGAGAAAAGGGATTAGTTCCCTATTGCGGAAATGATGTACGGAGTAGTTTTTTTTAAGCTAATTATTTGGCTTAATTACAAAAATTTCAATCAACAACTACATAGTCTACTACCTTGTCTTTTGTACTTAATTTATTTCATTTTTTCTTATAGAAAAATATGTAGTTATATTTTATTTTCGAGTTTTAAAAAATTAGTTGAAATAGTTGTGGATGTCACGTTGTAGTTAATGGTTTCTATGTGAGAAAATGGAGAAAATATTAGGTAAGTGGATTGGGATGAATTACCAAACAGGAAATTTGCTTAAGACCGCCATTTAACTTTGAGGGAAAGAGAAGTTATTAGTTTCTTCACTTCTTTAGCTTAATTGCTACAATAAGCTTGAAAATGTTTATAATTTCTAAATGGATTAAACACATGATATTAGGAATCGAGAAAAGAGAAAAGGATAAGTAAATAAAAAAGCACGGGT

Coding sequence (CDS)

ATGAGAACTAGAAGAGGACTCTGTTATCCGAAAGTTCATGCTTCCGCCACAACCACCGCCACCATGACTCTCTCTTTTCTTAAGAATAAGCAGATGAAGGTGACGGTGAGGAAGAGGAGTAATGATAACAGAGCTTTTGTTAATGGCGGCGGCGGCGACGATAAAAAGAGATCGTTGTTGTTGCCGGAAAATGAGAAAAACGATTTTGTTTTTACTAGTTTTGATAAAGTAGACAGAGTTCCTTGCCGGAAAAGAGCGAGAATCTCGTCGGAGTTTACAGCCGGCGGTTCGGATTTCTTCGACGGGTTGCCGGACGATCTCGTCGTTTCTATTCTGTGCAAGCTCAGTTCTACCGCTTCTTGTCCTGCCGATTTTGTCAACGTTCTCTTAACTTGCAAGAGATTCAACGGATTAGGTCTTAATTCAATGGTGTTATCGAAAGCTTCTCCGAAAACATTCGCCATTAAAGCTAAGAATTGGTCTGAATCTTCTCATCGCTTCCTAAGATCCTGCTCCGACTCCGGAAATGTCGAAGCTTGCTACACTCTCGGCATGATTCGATTCTACTGTTTACAAAACCGAGGAAGCGGAGCGTCACTAATGGCTAAAGCAGCGATTAACTCTCACGCGCAAGCTCTCTACTCCTTAGCGGTGATCCAATTCAATGGAAGCGGAGGAACAAAGAGTGACAAAGACCTACGCGCAGGAGTCGCGTTATGTGCACGTGCCGCCTTCTTAGGCCACGTAGACGCCCTCCGCGAGCTCGGCCACTGCCTACAAGACGGATACGGCGTCCGCCAAAACGTCGCCGAAGGGCGTCGTTTCCTTGTTCAGGCCAACGCTCGTGAGCTCGCCGCCGCTCTCACGTGCTCCACCTCAGCTTCCTCCTATATTGTCTCATCTCAGCCAGTTGGAAACCGCCTTGTGTCAACCACCACCGGAACAATCGGTTGTCCTTTGCTGAGTGACTTCGGTTGTAATGTTCCGGCACCGGAAGGTCACCCGGCGAATCAGTTCTTAACCGAATGGTTTACCGGTCGGACCAGTGAAAATCCTGGACCGGGATTAAGGCTTTGTTCTCACGCCGGGTGCGGTAGACCGGAGACACGTAAGCACGAATTTCGACGGTGTTCAGTTTGCGGTGCCGTGAATTACTGTTCGCGTGCTTGTCAAGCGCTTGATTGGAAGTTGAGGCATAAGGGTGACTGCGCTCCTATGCCTAGGTGGGTTGAAGTTGATGAAGAAAACATTAACGCCGGTGACGTTAACGGTAACGATGTTAATAACGGAGACGCTGATATAAACGCTATGGAAATGGATGAGGACAGTTAA

Protein sequence

MRTRRGLCYPKVHASATTTATMTLSFLKNKQMKVTVRKRSNDNRAFVNGGGGDDKKRSLLLPENEKNDFVFTSFDKVDRVPCRKRARISSEFTAGGSDFFDGLPDDLVVSILCKLSSTASCPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRFLRSCSDSGNVEACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAALTCSTSASSYIVSSQPVGNRLVSTTTGTIGCPLLSDFGCNVPAPEGHPANQFLTEWFTGRTSENPGPGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKGDCAPMPRWVEVDEENINAGDVNGNDVNNGDADINAMEMDEDS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06002.1Spo06002.1mRNA


Homology
[Close]
BLAST of Spo06002.1 vs. NCBI nr
Match: gi|902237144|gb|KNA24654.1| (hypothetical protein SOVF_013430 [Spinacia oleracea])

HSP 1 Score: 896.0 bits (2314), Expect = 2.700e-257
Identity = 442/443 (99.77%), Postives = 442/443 (99.77%), Query Frame = 1 

		  

Query: 1   MRTRRGLCYPKVHASATTTATMTLSFLKNKQMKVTVRKRSNDNRAFVNGGGGDDKKRSLL 60
           MRTRRGLCYPKVHA ATTTATMTLSFLKNKQMKVTVRKRSNDNRAFVNGGGGDDKKRSLL
Sbjct: 1   MRTRRGLCYPKVHAPATTTATMTLSFLKNKQMKVTVRKRSNDNRAFVNGGGGDDKKRSLL 60

Query: 61  LPENEKNDFVFTSFDKVDRVPCRKRARISSEFTAGGSDFFDGLPDDLVVSILCKLSSTAS 120
           LPENEKNDFVFTSFDKVDRVPCRKRARISSEFTAGGSDFFDGLPDDLVVSILCKLSSTAS
Sbjct: 61  LPENEKNDFVFTSFDKVDRVPCRKRARISSEFTAGGSDFFDGLPDDLVVSILCKLSSTAS 120

Query: 121 CPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRFLRSCSDSGNVEAC 180
           CPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRFLRSCSDSGNVEAC
Sbjct: 121 CPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRFLRSCSDSGNVEAC 180

Query: 181 YTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGVALC 240
           YTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGVALC
Sbjct: 181 YTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGVALC 240

Query: 241 ARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAALTCSTSASSYIVS 300
           ARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAALTCSTSASSYIVS
Sbjct: 241 ARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAALTCSTSASSYIVS 300

Query: 301 SQPVGNRLVSTTTGTIGCPLLSDFGCNVPAPEGHPANQFLTEWFTGRTSENPGPGLRLCS 360
           SQPVGNRLVSTTTGTIGCPLLSDFGCNVPAPEGHPANQFLTEWFTGRTSENPGPGLRLCS
Sbjct: 301 SQPVGNRLVSTTTGTIGCPLLSDFGCNVPAPEGHPANQFLTEWFTGRTSENPGPGLRLCS 360

Query: 361 HAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKGDCAPMPRWVEVDEENINAG 420
           HAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKGDCAPMPRWVEVDEENINAG
Sbjct: 361 HAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKGDCAPMPRWVEVDEENINAG 420

Query: 421 DVNGNDVNNGDADINAMEMDEDS 444
           DVNGNDVNNGDADINAMEMDEDS
Sbjct: 421 DVNGNDVNNGDADINAMEMDEDS 443
[Close]
BLAST of Spo06002.1 vs. NCBI nr
Match: gi|731343196|ref|XP_010682773.1| (PREDICTED: F-box protein At1g67340-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 688.3 bits (1775), Expect = 8.600e-195
Identity = 360/457 (78.77%), Postives = 386/457 (84.46%), Query Frame = 1 

		  

Query: 1   MRTRRGLCYPKVHASATTTATMTLSFLKNKQMKVTVRKRSNDNRAFVNGGG-GDDKKRSL 60
           MRTRRGLCYP+VHAS TTT T++L   + KQMKV  +K    NR FVNGG   DDK RS 
Sbjct: 1   MRTRRGLCYPEVHASTTTTMTLSL---QKKQMKV--KKMMKKNRGFVNGGDKDDDKMRSF 60

Query: 61  LLPENEKNDFVFTSFDK--VDRVPCRKRARISSEFTAGGSDFFDGLPDDLVVSILCKLSS 120
             PEN   DFVFT+F+K  VD   CRKRA+IS EF  GGSDFFD LPDDLVV IL KLSS
Sbjct: 61  SSPEN---DFVFTNFEKEKVD-FRCRKRAKISPEFAGGGSDFFDSLPDDLVVCILAKLSS 120

Query: 121 TASCPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRFLRSCSDSGNV 180
           TASCPADF+NVL+TCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRFL+ CSD+GNV
Sbjct: 121 TASCPADFINVLITCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRFLKFCSDAGNV 180

Query: 181 EACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGV 240
           EACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGV
Sbjct: 181 EACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGV 240

Query: 241 ALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAALTCSTSASSY 300
           ALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELA ALTC++S SS 
Sbjct: 241 ALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELATALTCASSPSSC 300

Query: 301 IVSSQPVGNRLVSTTTGT----IGCPLLSDFGCNVPAPEGHPANQFLTEWFTGRTSE--- 360
            +SS P GNR VS+TT T    +GCPLLSDFGCNVPAPE HPAN+FL+EWF+ RT E   
Sbjct: 301 WLSSSPTGNRHVSSTTATTTTNVGCPLLSDFGCNVPAPEAHPANRFLSEWFSVRTGEINS 360

Query: 361 -----NPGPGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKGDCAP 420
                NPGPGLRLCSH GCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKG+CAP
Sbjct: 361 NENEKNPGPGLRLCSHIGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKGECAP 420

Query: 421 MPRWVEVDEENINAGDVNGNDVNNGDADINAMEMDED 443
           MPRW    EENINA  VNG+  +N D  IN M++D+D
Sbjct: 421 MPRWA---EENINA--VNGHGNDNDDGVINGMDVDDD 443
[Close]
BLAST of Spo06002.1 vs. NCBI nr
Match: gi|870855749|gb|KMT07465.1| (hypothetical protein BVRB_6g150830 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 652.5 bits (1682), Expect = 5.200e-184
Identity = 337/422 (79.86%), Postives = 359/422 (85.07%), Query Frame = 1 

		  

Query: 36  VRKRSNDNRAFVNGGG-GDDKKRSLLLPENEKNDFVFTSFDK--VDRVPCRKRARISSEF 95
           V+K    NR FVNGG   DDK RS   PEN   DFVFT+F+K  VD   CRKRA+IS EF
Sbjct: 3   VKKMMKKNRGFVNGGDKDDDKMRSFSSPEN---DFVFTNFEKEKVD-FRCRKRAKISPEF 62

Query: 96  TAGGSDFFDGLPDDLVVSILCKLSSTASCPADFVNVLLTCKRFNGLGLNSMVLSKASPKT 155
             GGSDFFD LPDDLVV IL KLSSTASCPADF+NVL+TCKRFNGLGLNSMVLSKASPKT
Sbjct: 63  AGGGSDFFDSLPDDLVVCILAKLSSTASCPADFINVLITCKRFNGLGLNSMVLSKASPKT 122

Query: 156 FAIKAKNWSESSHRFLRSCSDSGNVEACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQA 215
           FAIKAKNWSESSHRFL+ CSD+GNVEACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQA
Sbjct: 123 FAIKAKNWSESSHRFLKFCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQA 182

Query: 216 LYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEG 275
           LYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEG
Sbjct: 183 LYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEG 242

Query: 276 RRFLVQANARELAAALTCSTSASSYIVSSQPVGNRLVSTTTGT----IGCPLLSDFGCNV 335
           RRFLVQANARELA ALTC++S SS  +SS P GNR VS+TT T    +GCPLLSDFGCNV
Sbjct: 243 RRFLVQANARELATALTCASSPSSCWLSSSPTGNRHVSSTTATTTTNVGCPLLSDFGCNV 302

Query: 336 PAPEGHPANQFLTEWFTGRTSE--------NPGPGLRLCSHAGCGRPETRKHEFRRCSVC 395
           PAPE HPAN+FL+EWF+ RT E        NPGPGLRLCSH GCGRPETRKHEFRRCSVC
Sbjct: 303 PAPEAHPANRFLSEWFSVRTGEINSNENEKNPGPGLRLCSHIGCGRPETRKHEFRRCSVC 362

Query: 396 GAVNYCSRACQALDWKLRHKGDCAPMPRWVEVDEENINAGDVNGNDVNNGDADINAMEMD 443
           GAVNYCSRACQALDWKLRHKG+CAPMPRW    EENINA  VNG+  +N D  IN M++D
Sbjct: 363 GAVNYCSRACQALDWKLRHKGECAPMPRWA---EENINA--VNGHGNDNDDGVINGMDVD 415
[Close]
BLAST of Spo06002.1 vs. NCBI nr
Match: gi|747050320|ref|XP_011071226.1| (PREDICTED: F-box protein At1g67340 [Sesamum indicum])

HSP 1 Score: 539.7 bits (1389), Expect = 4.900e-150
Identity = 269/366 (73.50%), Postives = 301/366 (82.24%), Query Frame = 1 

		  

Query: 78  DRVPCRKRARISSEFTAGGSDFFDGLPDDLVVSILCKLSSTASCPADFVNVLLTCKRFNG 137
           D + CRKR + +S   AG  DFFD LPDDL++SILCKLSSTA+CPADF+NVL+TCKR NG
Sbjct: 34  DNLACRKRLK-TSPVVAGECDFFDALPDDLLLSILCKLSSTAACPADFINVLITCKRLNG 93

Query: 138 LGLNSMVLSKASPKTFAIKAKNWSESSHRFLRSCSDSGNVEACYTLGMIRFYCLQNRGSG 197
           LGL+S+VLS+AS K  A+KA+NWSESSHRFL+ C+DSGNVEACYTLGMIRFYCLQNRGSG
Sbjct: 94  LGLHSLVLSRASQKMLAVKAQNWSESSHRFLKLCADSGNVEACYTLGMIRFYCLQNRGSG 153

Query: 198 ASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGH 257
           ASLMAKAAI+SHA ALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGH
Sbjct: 154 ASLMAKAAISSHASALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGH 213

Query: 258 CLQDGYGVRQNVAEGRRFLVQANARELAAALTCSTSASSYIVSSQPVGNRLVSTTTGTIG 317
           CLQDGYGV+QN+AEGRRFLVQANARELA  L  + SA   +  S    N       G  G
Sbjct: 214 CLQDGYGVKQNIAEGRRFLVQANARELAIVLAANPSA--VVPRSWLTCNTHRHAAGG--G 273

Query: 318 CPLLSDFGCNVPAPEGHPANQFLTEWFTGRTSENPGPGLRLCSHAGCGRPETRKHEFRRC 377
           CPLLSDFGCNVPAPE HPAN+FL+EWF+GR    PGPGLRLCSH+GCGRPETR+HEFRRC
Sbjct: 274 CPLLSDFGCNVPAPEAHPANRFLSEWFSGRNGGIPGPGLRLCSHSGCGRPETRRHEFRRC 333

Query: 378 SVCGAVNYCSRACQALDWKLRHKGDCAPMPRWVEVDEENINAGDVNGNDVNNGDADINAM 437
           SVCGAVNYCSRACQALDWKLRHK +C P  RW + D EN       GN++ NG  ++N  
Sbjct: 334 SVCGAVNYCSRACQALDWKLRHKVECTPAERWADEDGEN------EGNNILNGGGNVNGE 388

Query: 438 EMDEDS 444
           E  E+S
Sbjct: 394 EAMEES 388
[Close]
BLAST of Spo06002.1 vs. NCBI nr
Match: gi|661883131|emb|CDP13339.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 536.6 bits (1381), Expect = 4.200e-149
Identity = 269/390 (68.97%), Postives = 311/390 (79.74%), Query Frame = 1 

		  

Query: 48  NGGGGDDKKRSLLLPENEKNDFVFTSFDKVDRVPCRKRARISSEFTAGGSDFFDGLPDDL 107
           +GG G    R  +   +  +     S+    R   R   R++     G  DFFD LPDDL
Sbjct: 11  DGGEGTTNGRKKIKLSSSSSSSSSLSWCSTGRQQERGGGRVAVLNGGGDCDFFDALPDDL 70

Query: 108 VVSILCKLSSTASCPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRF 167
           +VSILCKLSSTA+CP+DF+N L+TCKR NGLGL+SMVLSKAS K  A+KA NWS+S+HRF
Sbjct: 71  LVSILCKLSSTATCPSDFINALITCKRLNGLGLHSMVLSKASQKMLAVKANNWSDSAHRF 130

Query: 168 LRSCSDSGNVEACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGT 227
           L+ C+DSGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI+SHA ALYSL+VIQFNGSGG+
Sbjct: 131 LKLCADSGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLSVIQFNGSGGS 190

Query: 228 KSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAA 287
           K+DKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV+QNV+EGRRFLVQANARELAA 
Sbjct: 191 KTDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVSEGRRFLVQANARELAAV 250

Query: 288 LTCSTSASSYIVSSQPVGNRLV--STTTGTIGCPLLSDFGCNVPAPEGHPANQFLTEWFT 347
           L+ S SAS+   S+    N L     + G+ GCPLLSDFGCNVPAPE HPA++FLTEWF 
Sbjct: 251 LSTSPSASALTSSNWLTWNPLSHHRHSPGSGGCPLLSDFGCNVPAPEAHPASRFLTEWFA 310

Query: 348 GRTSENPGPGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKGDCAP 407
            R   +PGPGLRLCSH+GCGRPETR+HEFRRCSVCGAVNYCSRACQALDWK+RHK +CAP
Sbjct: 311 AR-GGSPGPGLRLCSHSGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKMRHKAECAP 370

Query: 408 MPRWVEVDEENINAGDVNGNDVNNGDADIN 436
           + RW++ D EN   G+ NGND  NGD  +N
Sbjct: 371 VERWLDEDGENEGNGNGNGND--NGDGVVN 397
[Close]
BLAST of Spo06002.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0F6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_013430 PE=4 SV=1)

HSP 1 Score: 896.0 bits (2314), Expect = 1.900e-257
Identity = 442/443 (99.77%), Postives = 442/443 (99.77%), Query Frame = 1 

		  

Query: 1   MRTRRGLCYPKVHASATTTATMTLSFLKNKQMKVTVRKRSNDNRAFVNGGGGDDKKRSLL 60
           MRTRRGLCYPKVHA ATTTATMTLSFLKNKQMKVTVRKRSNDNRAFVNGGGGDDKKRSLL
Sbjct: 1   MRTRRGLCYPKVHAPATTTATMTLSFLKNKQMKVTVRKRSNDNRAFVNGGGGDDKKRSLL 60

Query: 61  LPENEKNDFVFTSFDKVDRVPCRKRARISSEFTAGGSDFFDGLPDDLVVSILCKLSSTAS 120
           LPENEKNDFVFTSFDKVDRVPCRKRARISSEFTAGGSDFFDGLPDDLVVSILCKLSSTAS
Sbjct: 61  LPENEKNDFVFTSFDKVDRVPCRKRARISSEFTAGGSDFFDGLPDDLVVSILCKLSSTAS 120

Query: 121 CPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRFLRSCSDSGNVEAC 180
           CPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRFLRSCSDSGNVEAC
Sbjct: 121 CPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRFLRSCSDSGNVEAC 180

Query: 181 YTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGVALC 240
           YTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGVALC
Sbjct: 181 YTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGVALC 240

Query: 241 ARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAALTCSTSASSYIVS 300
           ARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAALTCSTSASSYIVS
Sbjct: 241 ARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAALTCSTSASSYIVS 300

Query: 301 SQPVGNRLVSTTTGTIGCPLLSDFGCNVPAPEGHPANQFLTEWFTGRTSENPGPGLRLCS 360
           SQPVGNRLVSTTTGTIGCPLLSDFGCNVPAPEGHPANQFLTEWFTGRTSENPGPGLRLCS
Sbjct: 301 SQPVGNRLVSTTTGTIGCPLLSDFGCNVPAPEGHPANQFLTEWFTGRTSENPGPGLRLCS 360

Query: 361 HAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKGDCAPMPRWVEVDEENINAG 420
           HAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKGDCAPMPRWVEVDEENINAG
Sbjct: 361 HAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKGDCAPMPRWVEVDEENINAG 420

Query: 421 DVNGNDVNNGDADINAMEMDEDS 444
           DVNGNDVNNGDADINAMEMDEDS
Sbjct: 421 DVNGNDVNNGDADINAMEMDEDS 443
[Close]
BLAST of Spo06002.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C123_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g150830 PE=4 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 3.600e-184
Identity = 337/422 (79.86%), Postives = 359/422 (85.07%), Query Frame = 1 

		  

Query: 36  VRKRSNDNRAFVNGGG-GDDKKRSLLLPENEKNDFVFTSFDK--VDRVPCRKRARISSEF 95
           V+K    NR FVNGG   DDK RS   PEN   DFVFT+F+K  VD   CRKRA+IS EF
Sbjct: 3   VKKMMKKNRGFVNGGDKDDDKMRSFSSPEN---DFVFTNFEKEKVD-FRCRKRAKISPEF 62

Query: 96  TAGGSDFFDGLPDDLVVSILCKLSSTASCPADFVNVLLTCKRFNGLGLNSMVLSKASPKT 155
             GGSDFFD LPDDLVV IL KLSSTASCPADF+NVL+TCKRFNGLGLNSMVLSKASPKT
Sbjct: 63  AGGGSDFFDSLPDDLVVCILAKLSSTASCPADFINVLITCKRFNGLGLNSMVLSKASPKT 122

Query: 156 FAIKAKNWSESSHRFLRSCSDSGNVEACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQA 215
           FAIKAKNWSESSHRFL+ CSD+GNVEACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQA
Sbjct: 123 FAIKAKNWSESSHRFLKFCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQA 182

Query: 216 LYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEG 275
           LYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEG
Sbjct: 183 LYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEG 242

Query: 276 RRFLVQANARELAAALTCSTSASSYIVSSQPVGNRLVSTTTGT----IGCPLLSDFGCNV 335
           RRFLVQANARELA ALTC++S SS  +SS P GNR VS+TT T    +GCPLLSDFGCNV
Sbjct: 243 RRFLVQANARELATALTCASSPSSCWLSSSPTGNRHVSSTTATTTTNVGCPLLSDFGCNV 302

Query: 336 PAPEGHPANQFLTEWFTGRTSE--------NPGPGLRLCSHAGCGRPETRKHEFRRCSVC 395
           PAPE HPAN+FL+EWF+ RT E        NPGPGLRLCSH GCGRPETRKHEFRRCSVC
Sbjct: 303 PAPEAHPANRFLSEWFSVRTGEINSNENEKNPGPGLRLCSHIGCGRPETRKHEFRRCSVC 362

Query: 396 GAVNYCSRACQALDWKLRHKGDCAPMPRWVEVDEENINAGDVNGNDVNNGDADINAMEMD 443
           GAVNYCSRACQALDWKLRHKG+CAPMPRW    EENINA  VNG+  +N D  IN M++D
Sbjct: 363 GAVNYCSRACQALDWKLRHKGECAPMPRWA---EENINA--VNGHGNDNDDGVINGMDVD 415
[Close]
BLAST of Spo06002.1 vs. UniProtKB/TrEMBL
Match: A0A068UYL5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038241001 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 2.900e-149
Identity = 269/390 (68.97%), Postives = 311/390 (79.74%), Query Frame = 1 

		  

Query: 48  NGGGGDDKKRSLLLPENEKNDFVFTSFDKVDRVPCRKRARISSEFTAGGSDFFDGLPDDL 107
           +GG G    R  +   +  +     S+    R   R   R++     G  DFFD LPDDL
Sbjct: 11  DGGEGTTNGRKKIKLSSSSSSSSSLSWCSTGRQQERGGGRVAVLNGGGDCDFFDALPDDL 70

Query: 108 VVSILCKLSSTASCPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRF 167
           +VSILCKLSSTA+CP+DF+N L+TCKR NGLGL+SMVLSKAS K  A+KA NWS+S+HRF
Sbjct: 71  LVSILCKLSSTATCPSDFINALITCKRLNGLGLHSMVLSKASQKMLAVKANNWSDSAHRF 130

Query: 168 LRSCSDSGNVEACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGT 227
           L+ C+DSGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI+SHA ALYSL+VIQFNGSGG+
Sbjct: 131 LKLCADSGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLSVIQFNGSGGS 190

Query: 228 KSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAA 287
           K+DKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV+QNV+EGRRFLVQANARELAA 
Sbjct: 191 KTDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVSEGRRFLVQANARELAAV 250

Query: 288 LTCSTSASSYIVSSQPVGNRLV--STTTGTIGCPLLSDFGCNVPAPEGHPANQFLTEWFT 347
           L+ S SAS+   S+    N L     + G+ GCPLLSDFGCNVPAPE HPA++FLTEWF 
Sbjct: 251 LSTSPSASALTSSNWLTWNPLSHHRHSPGSGGCPLLSDFGCNVPAPEAHPASRFLTEWFA 310

Query: 348 GRTSENPGPGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKGDCAP 407
            R   +PGPGLRLCSH+GCGRPETR+HEFRRCSVCGAVNYCSRACQALDWK+RHK +CAP
Sbjct: 311 AR-GGSPGPGLRLCSHSGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKMRHKAECAP 370

Query: 408 MPRWVEVDEENINAGDVNGNDVNNGDADIN 436
           + RW++ D EN   G+ NGND  NGD  +N
Sbjct: 371 VERWLDEDGENEGNGNGNGND--NGDGVVN 397
[Close]
BLAST of Spo06002.1 vs. UniProtKB/TrEMBL
Match: A0A067GQ94_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015393mg PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 1.200e-147
Identity = 277/388 (71.39%), Postives = 307/388 (79.12%), Query Frame = 1 

		  

Query: 60  LLPENEKNDFVFTSFDKVDRVPCRKRARISSEFTAGGSDFFDGLPDDLVVSILCKLSSTA 119
           ++P N+K    F+S +   +   RK+AR S +  AG SD FD LPDDLVVSILCKLSSTA
Sbjct: 21  VVPVNDKKRRGFSSGEP--KTTYRKKARFSPD-VAGKSDLFDALPDDLVVSILCKLSSTA 80

Query: 120 SCPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRFLRSCSDSGNVEA 179
            CP+DFVNVL+TCKR NGL LNS+VLSKAS KTFAIKA NWSES+HRFL+ C+D+GNVEA
Sbjct: 81  RCPSDFVNVLITCKRMNGLALNSLVLSKASKKTFAIKANNWSESAHRFLKLCADAGNVEA 140

Query: 180 CYTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGVAL 239
           CYTLGMIRFYCLQNRGSGASLMAKAAI+SHAQALYSLAVIQFNGSGG+K+DKDLRAGVAL
Sbjct: 141 CYTLGMIRFYCLQNRGSGASLMAKAAISSHAQALYSLAVIQFNGSGGSKNDKDLRAGVAL 200

Query: 240 CARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAALTCST----SAS 299
           CARAAFLGH+DALRELGHCLQDGYGVRQN+AEGRRFLVQANARELAA L+ +     S  
Sbjct: 201 CARAAFLGHIDALRELGHCLQDGYGVRQNIAEGRRFLVQANARELAAVLSSAACQGISTR 260

Query: 300 SYIV---SSQPVG-------NRLVSTTTGTIGCPLLSDFGCNVPAPEGHPANQFLTEWFT 359
           S++     SQP         N   +     IGCPLLSDFGCNVPAPE HPA++FL EWF 
Sbjct: 261 SWLTWNPLSQPHPAPHPRNQNPNHNGHVTGIGCPLLSDFGCNVPAPEAHPASRFLAEWFA 320

Query: 360 GRTSENPGPGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKGDCAP 419
            R    PGPGLRLCSH GCGRPETR+HEFRRCSVCGAVNYCSRACQALDWKLRHK DCAP
Sbjct: 321 ARGG-TPGPGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKADCAP 380

Query: 420 MPRWVEVDEENINAGDVNGNDVNNGDAD 434
             RW  +DEE     DV+ ND   G  D
Sbjct: 381 AERW--LDEEGNGDVDVDLNDAEGGGED 402
[Close]
BLAST of Spo06002.1 vs. UniProtKB/TrEMBL
Match: V4TN74_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031699mg PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 2.100e-147
Identity = 274/389 (70.44%), Postives = 307/389 (78.92%), Query Frame = 1 

		  

Query: 60  LLPENEKNDFVFTSFDKVDRVPCRKRARISSEFTAGGSDFFDGLPDDLVVSILCKLSSTA 119
           ++P N+K     +S +   +   RK+AR S +  AG SD FD LPDDLVVSILCKLSSTA
Sbjct: 21  VVPVNDKKRRGLSSGEP--KTTYRKKARFSPD-VAGKSDLFDALPDDLVVSILCKLSSTA 80

Query: 120 SCPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAIKAKNWSESSHRFLRSCSDSGNVEA 179
            CP+DFVNVL+TCKR NGL LNS+VLSKAS KTFAIKA NWSES+HRFL+ C+D+GNVEA
Sbjct: 81  RCPSDFVNVLITCKRMNGLALNSLVLSKASKKTFAIKANNWSESAHRFLKLCADAGNVEA 140

Query: 180 CYTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGVAL 239
           CYTLGMIRFYCLQNRGSGASLMAKAAI+SHAQALYSLAVIQFNGSGG+K+DKDLRAGVAL
Sbjct: 141 CYTLGMIRFYCLQNRGSGASLMAKAAISSHAQALYSLAVIQFNGSGGSKNDKDLRAGVAL 200

Query: 240 CARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAALT---CSTSASS 299
           CARAAFLGH+DALRELGHCLQDGYGVRQN+AEGRRFLVQANARELAA L+   C   ++ 
Sbjct: 201 CARAAFLGHIDALRELGHCLQDGYGVRQNIAEGRRFLVQANARELAAVLSSAACQGISTR 260

Query: 300 YIVSSQPVGNRLVST------------TTGTIGCPLLSDFGCNVPAPEGHPANQFLTEWF 359
            +++  P+     +              TG IGCPLLSDFGCNVPAPE HPA++FL EWF
Sbjct: 261 SLLTWNPLSQPHPAPHPRNPNPNHNGHVTG-IGCPLLSDFGCNVPAPEAHPASRFLAEWF 320

Query: 360 TGRTSENPGPGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKGDCA 419
             R    PGPGLRLCSH GCGRPETR+HEFRRCSVCGAVNYCSRACQALDWKLRHK DCA
Sbjct: 321 AARGG-TPGPGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKADCA 380

Query: 420 PMPRWVEVDEENINAGDVNGNDVNNGDAD 434
           P  RW  +DEE     DV+ ND   G  D
Sbjct: 381 PAERW--LDEEGNGDVDVDLNDAEGGGED 402
[Close]
BLAST of Spo06002.1 vs. ExPASy Swiss-Prot
Match: FB76_ARATH (F-box protein At1g67340 OS=Arabidopsis thaliana GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 2.300e-139
Identity = 246/337 (73.00%), Postives = 276/337 (81.90%), Query Frame = 1 

		  

Query: 96  GSDFFDGLPDDLVVSILCKLSSTASCPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAI 155
           G+D  D +PDDLV+SILCKL ST+ CPADF+NVLLTCKR  GL +N +VLS+ SPK  A+
Sbjct: 40  GADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAV 99

Query: 156 KAKNWSESSHRFLRSCSDSGNVEACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYS 215
           KA NWSE SHRFL+ C D+G++EACYTLGMIRFYCLQNRG+GASLMAKAAI+SHA ALYS
Sbjct: 100 KAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYS 159

Query: 216 LAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRF 275
           LAVIQFNGSGG+K+DKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGV QNV+EGRRF
Sbjct: 160 LAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRF 219

Query: 276 LVQANARELAAALTCSTSA-SSYIVSSQPVGNRLVSTTTGTIGCPLLSDFGCNVPAPEGH 335
           LVQANARELAA L+    A S+++  SQP     V    G   CPLLSDFGCNVPAPE H
Sbjct: 220 LVQANARELAAVLSSGIQARSTWLSLSQPPPP--VVPNHGQQTCPLLSDFGCNVPAPETH 279

Query: 336 PANQFLTEWFTGRTSENPGPGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALD 395
           PAN+FL +WF  R  + PG GLRLCSHAGCGRPETRKHEFRRCSVCG VNYCSRACQALD
Sbjct: 280 PANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALD 339

Query: 396 WKLRHKGDCAPMPRWVEVDEENINAGDVNGNDVNNGD 432
           WKLRHK DCAP+ RW+E  +       ++GN   NGD
Sbjct: 340 WKLRHKMDCAPVQRWLEEGDGGEGNVQIDGN--GNGD 372
[Close]
BLAST of Spo06002.1 vs. ExPASy Swiss-Prot
Match: FB342_ARATH (F-box protein At5g50450 OS=Arabidopsis thaliana GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 3.100e-104
Identity = 196/351 (55.84%), Postives = 252/351 (71.79%), Query Frame = 1 

		  

Query: 84  KRARISSEFTAGGSDFFDGLPDDLVVSILCKLSSTASCPADFVNVLLTCKRFNGLGLNSM 143
           K+ R+ +      ++ F+ L DDL++SIL KL+++AS P+DF+ VL TCKR N LGL+ +
Sbjct: 6   KKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPL 65

Query: 144 VLSKASPKTFAIKAKNWSESSHRFLRSCSDSGNVEACYTLGMIRFYCLQNRGSGASLMAK 203
           VLSKA  +T A+ A+ WS+SSH+FL+ C ++GN++A Y+LGMIRFYCLQN  SGASLMAK
Sbjct: 66  VLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAK 125

Query: 204 AAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGY 263
           AAI SHA ALYSL+VIQFNGSGG+K+DK+LRAGVALCAR+A+LGHVDALRELGHCLQDGY
Sbjct: 126 AAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGY 185

Query: 264 GVRQNVAEGRRFLVQANARELAAALTCSTSASSYIVSSQPVGNRLVSTTTGTIGCPLLSD 323
           GV ++V+EGRR L+QANARELA +L    S  S        G+   + T  ++       
Sbjct: 186 GVPRDVSEGRRLLIQANARELACSLRSYLSLKS--------GDENETLTDLSV------- 245

Query: 324 FGCNVPAPEGHPANQFLTEWF-TGRTSENPGPGLRLCSHAGCGRPETRKHEFRRCSVCGA 383
               VP  E HP N+FL EWF +GR   +   GLR+CSH GCGRPETR HEFRRCSVCG 
Sbjct: 246 ----VPVQEIHPVNRFLKEWFSSGRV--DLAEGLRMCSHGGCGRPETRAHEFRRCSVCGK 305

Query: 384 VNYCSRACQALDWKLRHKGDCAPMPRWVEVDEENINAGDVNGNDVNNGDAD 434
           VNYCSR CQALDW+ +HK +C P+  WV    E  + G+    ++++   +
Sbjct: 306 VNYCSRGCQALDWRAKHKVECTPLDLWVAAAAEIGDDGEAVAVEIDDNHGE 335
[Close]
BLAST of Spo06002.1 vs. TAIR (Arabidopsis)
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 496.9 bits (1278), Expect = 1.300e-140
Identity = 246/337 (73.00%), Postives = 276/337 (81.90%), Query Frame = 1 

		  

Query: 96  GSDFFDGLPDDLVVSILCKLSSTASCPADFVNVLLTCKRFNGLGLNSMVLSKASPKTFAI 155
           G+D  D +PDDLV+SILCKL ST+ CPADF+NVLLTCKR  GL +N +VLS+ SPK  A+
Sbjct: 40  GADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAV 99

Query: 156 KAKNWSESSHRFLRSCSDSGNVEACYTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYS 215
           KA NWSE SHRFL+ C D+G++EACYTLGMIRFYCLQNRG+GASLMAKAAI+SHA ALYS
Sbjct: 100 KAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYS 159

Query: 216 LAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRF 275
           LAVIQFNGSGG+K+DKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGV QNV+EGRRF
Sbjct: 160 LAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRF 219

Query: 276 LVQANARELAAALTCSTSA-SSYIVSSQPVGNRLVSTTTGTIGCPLLSDFGCNVPAPEGH 335
           LVQANARELAA L+    A S+++  SQP     V    G   CPLLSDFGCNVPAPE H
Sbjct: 220 LVQANARELAAVLSSGIQARSTWLSLSQPPPP--VVPNHGQQTCPLLSDFGCNVPAPETH 279

Query: 336 PANQFLTEWFTGRTSENPGPGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALD 395
           PAN+FL +WF  R  + PG GLRLCSHAGCGRPETRKHEFRRCSVCG VNYCSRACQALD
Sbjct: 280 PANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALD 339

Query: 396 WKLRHKGDCAPMPRWVEVDEENINAGDVNGNDVNNGD 432
           WKLRHK DCAP+ RW+E  +       ++GN   NGD
Sbjct: 340 WKLRHKMDCAPVQRWLEEGDGGEGNVQIDGN--GNGD 372
[Close]
BLAST of Spo06002.1 vs. TAIR (Arabidopsis)
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 380.2 bits (975), Expect = 1.800e-105
Identity = 196/351 (55.84%), Postives = 252/351 (71.79%), Query Frame = 1 

		  

Query: 84  KRARISSEFTAGGSDFFDGLPDDLVVSILCKLSSTASCPADFVNVLLTCKRFNGLGLNSM 143
           K+ R+ +      ++ F+ L DDL++SIL KL+++AS P+DF+ VL TCKR N LGL+ +
Sbjct: 6   KKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPL 65

Query: 144 VLSKASPKTFAIKAKNWSESSHRFLRSCSDSGNVEACYTLGMIRFYCLQNRGSGASLMAK 203
           VLSKA  +T A+ A+ WS+SSH+FL+ C ++GN++A Y+LGMIRFYCLQN  SGASLMAK
Sbjct: 66  VLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAK 125

Query: 204 AAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGY 263
           AAI SHA ALYSL+VIQFNGSGG+K+DK+LRAGVALCAR+A+LGHVDALRELGHCLQDGY
Sbjct: 126 AAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGY 185

Query: 264 GVRQNVAEGRRFLVQANARELAAALTCSTSASSYIVSSQPVGNRLVSTTTGTIGCPLLSD 323
           GV ++V+EGRR L+QANARELA +L    S  S        G+   + T  ++       
Sbjct: 186 GVPRDVSEGRRLLIQANARELACSLRSYLSLKS--------GDENETLTDLSV------- 245

Query: 324 FGCNVPAPEGHPANQFLTEWF-TGRTSENPGPGLRLCSHAGCGRPETRKHEFRRCSVCGA 383
               VP  E HP N+FL EWF +GR   +   GLR+CSH GCGRPETR HEFRRCSVCG 
Sbjct: 246 ----VPVQEIHPVNRFLKEWFSSGRV--DLAEGLRMCSHGGCGRPETRAHEFRRCSVCGK 305

Query: 384 VNYCSRACQALDWKLRHKGDCAPMPRWVEVDEENINAGDVNGNDVNNGDAD 434
           VNYCSR CQALDW+ +HK +C P+  WV    E  + G+    ++++   +
Sbjct: 306 VNYCSRGCQALDWRAKHKVECTPLDLWVAAAAEIGDDGEAVAVEIDDNHGE 335
The following BLAST results are available for this feature:
BLAST of Spo06002.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902237144|gb|KNA24654.1|2.7e-25799.7hypothetical protein SOVF_0134... [more]
gi|731343196|ref|XP_010682773.1|8.6e-19578.7PREDICTED: F-box protein At1g6... [more]
gi|870855749|gb|KMT07465.1|5.2e-18479.8hypothetical protein BVRB_6g15... [more]
gi|747050320|ref|XP_011071226.1|4.9e-15073.5PREDICTED: F-box protein At1g6... [more]
gi|661883131|emb|CDP13339.1|4.2e-14968.9unnamed protein product [Coffe... [more]
back to top
BLAST of Spo06002.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S0F6_SPIOL1.9e-25799.7Uncharacterized protein OS=Spi... [more]
A0A0J8C123_BETVU3.6e-18479.8Uncharacterized protein OS=Bet... [more]
A0A068UYL5_COFCA2.9e-14968.9Uncharacterized protein OS=Cof... [more]
A0A067GQ94_CITSI1.2e-14771.3Uncharacterized protein OS=Cit... [more]
V4TN74_9ROSI2.1e-14770.4Uncharacterized protein OS=Cit... [more]
back to top
BLAST of Spo06002.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
FB76_ARATH2.3e-13973.0F-box protein At1g67340 OS=Ara... [more]
FB342_ARATH3.1e-10455.8F-box protein At5g50450 OS=Ara... [more]
back to top
BLAST of Spo06002.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G67340.11.3e-14073.0HCP-like superfamily protein w... [more]
AT5G50450.11.8e-10555.8HCP-like superfamily protein w... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainunknownSSF81383F-box domaincoord: 93..153
score: 7.9
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 363..403
score: 1.
IPR002893Zinc finger, MYND-typePROFILEPS50865ZF_MYND_2coord: 361..403
score: 10
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 167..282
score: 3.5
NoneNo IPR availableGENE3D1.20.1280.50coord: 97..138
score: 4.
NoneNo IPR availablePANTHERPTHR12298PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATEDcoord: 78..421
score: 1.6E
NoneNo IPR availablePANTHERPTHR12298:SF7SUBFAMILY NOT NAMEDcoord: 78..421
score: 1.6E
NoneNo IPR availableunknownSSF144232HIT/MYND zinc finger-likecoord: 358..409
score: 8.72
NoneNo IPR availableunknownSSF81901HCP-likecoord: 164..280
score: 4.71

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006421 asparaginyl-tRNA aminoacylation
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0009088 threonine biosynthetic process
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0009414 response to water deprivation
biological_process GO:0009737 response to abscisic acid
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005576 extracellular region
cellular_component GO:0005739 mitochondrion
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005840 ribosome
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0005622 intracellular
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0004816 asparagine-tRNA ligase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0050661 NADP binding
molecular_function GO:0051287 NAD binding
molecular_function GO:0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity
molecular_function GO:0004073 aspartate-semialdehyde dehydrogenase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo111950.82Barchart | Table
Spo074170.77Barchart | Table
Spo035270.77Barchart | Table
Spo143800.76Barchart | Table
Spo102690.76Barchart | Table
Spo185050.75Barchart | Table
Spo249310.75Barchart | Table
Spo222910.74Barchart | Table
Spo209970.73Barchart | Table
Spo101470.73Barchart | Table
Spo095730.73Barchart | Table
Spo151500.72Barchart | Table
Spo118500.72Barchart | Table
Spo036260.72Barchart | Table
Spo136210.72Barchart | Table
Spo023970.71Barchart | Table
Spo154380.71Barchart | Table
Spo045270.71Barchart | Table
Spo050640.71Barchart | Table
Spo063180.71Barchart | Table
Spo144040.71Barchart | Table
Spo206470.71Barchart | Table
Spo078210.71Barchart | Table
Spo081240.71Barchart | Table
Spo101650.71Barchart | Table
Spo105530.70Barchart | Table
Spo105970.70Barchart | Table
Spo159610.70Barchart | Table
Spo176620.70Barchart | Table
Spo070160.70Barchart | Table
Spo179030.70Barchart | Table
Spo253610.70Barchart | Table
Spo157310.70Barchart | Table
Spo120640.69Barchart | Table
Spo010610.69Barchart | Table
Spo245730.69Barchart | Table
Spo237740.69Barchart | Table
Spo070170.69Barchart | Table
Spo257480.69Barchart | Table
Spo105990.69Barchart | Table
Spo134810.69Barchart | Table
Spo029280.69Barchart | Table
Spo216550.68Barchart | Table
Spo185740.68Barchart | Table
Spo050900.68Barchart | Table
Spo228910.68Barchart | Table
Spo164600.68Barchart | Table
Spo224010.68Barchart | Table
Spo189010.68Barchart | Table
Spo038020.67Barchart | Table
Spo116790.67Barchart | Table
Spo003750.67Barchart | Table
Spo105650.67Barchart | Table
Spo019990.67Barchart | Table
Spo036240.67Barchart | Table
Spo015350.67Barchart | Table
Spo060050.66Barchart | Table
Spo025180.66Barchart | Table
Spo033050.66Barchart | Table
Spo041370.66Barchart | Table
Spo069040.66Barchart | Table
Spo086910.66Barchart | Table
Spo103900.66Barchart | Table
Spo116430.66Barchart | Table
Spo135610.66Barchart | Table
Spo192000.66Barchart | Table
Spo194410.66Barchart | Table
Spo220230.66Barchart | Table
Spo224520.66Barchart | Table
Spo243950.66Barchart | Table
Spo230380.65Barchart | Table
Spo232410.65Barchart | Table
Spo217640.65Barchart | Table
Spo022870.65Barchart | Table
Spo200530.65Barchart | Table
Spo075370.65Barchart | Table
Spo003410.65Barchart | Table
Spo225050.65Barchart | Table