Spo06053 (gene)

Overview
NameSpo06053
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionNADH ubiquinone oxidoreductase B22-like subunit
LocationSpoScf_00962 : 137956 .. 142448 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCAAATTACCAACTCAACAAATAGGTTAGCTAATAGTTAAAGTCCAAGATTAGTTTTATACTATATAACATACCAATTCGCATTCCTACGATCCAAACGCCCCCTACGATCTCAACCTCTATTTCCAATCTCAACCTCTATTTCTCAAATTCGCATTCGTACGATCCAAACGCCACCTTAGGAGACATATGGGTAAATGTCTAAATGATCGGTTGGAACTTAGAACCACAAATGATGAGATGATCCTAATTTACCTTCAGAATTTCATACTCCTACGACGTCGTTGAGTGTAACCCACCCCATTGTTGGTTGCAAATCCTCTCTCTAGAAAGAAAGAATAAAAAAGAAAGAGAGGAAAGTTGAAACAACAAAAACCAGAGGAGAGAGAAAATGAGCTTGTCGACGGCGTCGTTTTTGGCGAGAAGAGCAGCACAGAAACAGAAGGTCCGACTTCTCTACCGCCGTTGTCTCCGGGATACTCTCAATTGGGCCGTTCATCGTCATCTCTTCTACGAAGATGTAATCTAATTTCCCCCATCTCAAAACCCTAATTTCATCCCCATTTCCAATTCATTTCTAGGGTTTCGATCCGATCCTGTGATTTTAACCTTGCTTTCTGCCAATCTTTTTGTTTTTCAGGCTGATGAGCTCCGGAAAAAGTTCGAGGCTAACAAAAATCTGGTATTTTTAATTTATTTTTGGTATAATGTAGGAATTAGGAATTTATTTAACTACATTTAGTCTGAAATTTGCGTTTACTGATTAATACGATATGGTGCAAATTCACATGTTTTTTGATTTTTTTGGGTACCAATTGTTCAAAGTAAGGTTCGATGTCGTGATTAGATGGATGCAGTAGCTGAATTAGAGTGTATGAGTAGTGATATTTGGGATTGACGGTCCTCTGAATATTTTAATGTTTCCATTTGCGATAATCAGTAAATTTGTGTGCTTTTGTATATGAAGATGGTGCAGTTGAATTCAGTTTAGTGCATTTGTATAGGGGAGGGGCGAGTGAGGTTAATTGTTGTAGGCAAACAGGTTTTGGTATTGTTTTTGATTTGATTTGTGTGAATCTTACCGAGATGCTTTTTATGATGTTATAGCAAGATCCTGATGCAATTGACAAAATGATTGCTGTTGGTGAATCTGAGTACAATAAGTGGAGGCACCCTGATCCTTATATTGGTAAGCAATGCATAACCATCGGCTTGTTACATTATTTTTTATTTTCTTTGTGATAGTGTCCCATATACATTGATCTGATTGTCATATATGTTGTATGTGTGTCTTAGCGTTAGTGTGAGACTTCATTGAATGTTTAAGAATCCACTTATTACCTTTGCGACCTTCATTGGCGCAGTGCATTTTAATGAATAGGCTAGTGTAACTTTCACATCATGTTCTGAATGAGGAGTAAGAAGAAAAGGGATACAAGAAAGACCTTTGATCGTTAGTTTGATTTGTACTTTGAGGATAGAATTTGTCTATTTTAGGCAATTCTCTTCAACAGACTACACTAACTGCGAAATCATGGCTAGACTAGTGATTTCTTGGAAATCCTTACGAAGTATAACATTATGTATGGGAAATCCTTCTTTTTGCCTATCAAACCACATATGTAAACAGAGTTTCTTCACTTATCTTTTCTATTGCTCTCCATTTTCCCCTTTGCCCAGCCTATCCATCCCTCTTTATTGCTTGGAGTGGGTAGACTGTGGAGACTGGAGAGTAAGATAAATTATACAGGGATTTCTGGCATACATAAAGTGGGTCAATGTTATTAAGTTTTTTTTATTACAGTTTACATAATGTGAATGCCCTAGTGCACCTGCAGGATAAGTTAATGAAGGGTTGTTTTTGTATCTTATAGTATCGTAACTTGTTTATTATGGACACTCTGTATCTCATGTATTTTCAACCTCCTCTGCAGTTCCATGGGCTCCTGGCGGTTCAAAGTTCTGCAGAAACCCAGAGCCACCTAAAGGGGTATGTGCTCTTCTTGCTCTGGTTTAATAATGTTTTACTTTTTACTTTGGCACAATTATTTTGTTTTTACCTCAGGATACATGCATTTTCTGATTCTTGGCATCCTATTGCTAGTATTTTGCCCGAGTGAAATGGAATGAGAAAATTGCTCTATATCTTGTATTCCAACAATAACTTTTCGGCTATTAGTTAATGTAAATGTAGGCTATTGTGTAATATAGTTCATCACTTGTACCATTGACGGTTTGTGTGAACGTGACTTGATGTGTTTAATATTTGTTAGTACTAAGCTCCAATGGATTCAGATTGTAACTGATATCTACCACTATCAGGCTCCTTTGGTTGATTACAATAATATGTAATATATTGTCCCACATTTTTAGGGCATACTTTTTTTAGGAATCTCCCAAAATAATAGACCACTTTTGATTGTAGTGAGTTAGTTTATGAGTTTTCTAAAATTTTACTTTGTTTAGGTTTTGTTTGTAGTATCATAATAAGATATTTGTTCTCAACAATTGTATAAATTATCAGGAGTGAAGTGGTATTTCGAGCAGAAAATTTTAAAATGATCTTTGACGATTTGACCAAGTGTGGTCTATTAAAGTGGCAAGAAGGGAGTATTGTCGTTCTTTGTGGAATGACAATTCCTCTTTTATGCTTTATCGGAGAAGAAATATCTCGTAAAGACTCTTGCATTTGCAAATACTAGCCGTGGACACCATTCGGTTATATTATTATTATATGATTGTGGCATGATGTAGGACCCATTTTTGCTTTGGTTATACAGAATGTTGTCTCTCTTTTTCGTTTGACCTTAAACTTCACTTGTAACTGTTGGTTGTGCACGTGTGCGTAAGGTTAAGGGTATTTCTATTCAGCTTGTTGATTTGACAAAACAATTTCCCCTTCCTTGCCCCCCATGGAAGGGGGTGGGGGGCATTATTTTTCTCAGTTTTTTATTTTCTTGATCATTGGAGGAAAATTACTTTCAGTTGGTTAGGGCTTTGTGGTGCTGGTTGTTTCCTTTGATTTCATTTTCTGAAGTACCCTTCAGCAGGGTAGGTCGTTGAACAGTTCCCTTGAGTAATTAGGTTGTAATGAATAAAACTGAAGACTGATATTTGCTATGGCAACCCTCAAATCATATTATCTACTTTTCCATAGCTCAATGCTGATATAAGTTTGTTGGTTAATATGGTTTAAATACTTACCGAATACTTTGGAGCATTATTTGGATTTCGTACTTTTTCTTTCTGCTTTGTTACAAAGATCTTGAATTTGATTGGTCCTTAATTTTGAATTCTGATTTCTTCATGCCTTGCGGCTTCATAAATTTGACTAATGCAGATTGAGATTATTTACGACTATGGCCAAGAAGAGGTCGAGCCAAGGTAGCTGCATATCTTTAATGCAGTAAGTAAGGTAATGTGCGTAGTCAACCCTTTTTGCTTCTGAGCTTGTTGACTTAATTTTGAAAGGGAAATTAAGAAGTGATTTGTTTTAAAAACATTTTAACTTAACCTTTGTATTATGATTCTAGTCTTATATGTTGGTCTGACTGGATGTTGCAGATGAAAATTACCCTGGCCGTGGTGGGTAGATAATGATGAAGAGTCATCTTCCCGTTTGCATTTACCTGCGTTTCAAACATTTGAGATATTGAGTTTCTCGTTTTGTAATTTACTTAGGTTGTTTGCAGTCCGCAGTTGATGTTAGCTGTTGGGGAAAATTTGTGCACATGATTTGTTGATCTTCTAAAGAATTGAATAATTTACTCGAATGAAAATAAGTTTGACCTTTCTAAAGGCATCAGCCCATGGGTTTTGTAGTAGCGGATCGGTGGTGGTGACTCAGGATTTTATCCATTTTGACTTAAAGAGTAGCCAGATTGTTAACTCCTAGAATGGTGGGACAGGGAAAACTGTCCTAATTGCCATGAAACCTCATTGTTGTGAAAACACATACAGCTTGACTGCTAGGAAGTTGTCAACACTCGGAGTCTTTAGGCTCACGACGGGAAATGGGAAATGGGAAATGCGAAATGGTTGATGAAACCTGAAAGTTGCGGTAAATTTGAGAATATCTTGTAAAATGATGGTGGTAGAGAATAGACCTGGTTATTGGACAGGGTAGTCCAATGGATATAGGGTTAGTGTCAAGTTAATAGGGCTTTTATTGGGTAGGGCTCTTATTGGACAGGACCTTTATTGGACAGGGTCATTATAGGGTCAAACTTATACTACAATTATTTTGAAAATAAAAATAGTAATGATACAAAAAATTACGTGCATAGCTTCGTATTTAATTGTACTTGCACATGGCTCTTTTGTTTTTCATTTTTCATTGCTCGTTTATTGACCCGCCCACTAATGACCCGCTATTGACCCGCGACCCGCTTTTGACCCGCCTATTATCGACCCTTTAAAAATGACCCTTTCAATACCCGACCCTCTTTTGACCCGCACCGACCCTGACCCGCCCCGCCCGATAACCAGGTCTA

mRNA sequence

GTCAAATTACCAACTCAACAAATAGGTTAGCTAATAGTTAAAGTCCAAGATTAGTTTTATACTATATAACATACCAATTCGCATTCCTACGATCCAAACGCCCCCTACGATCTCAACCTCTATTTCCAATCTCAACCTCTATTTCTCAAATTCGCATTCGTACGATCCAAACGCCACCTTAGGAGACATATGGGTAAATGTCTAAATGATCGGTTGGAACTTAGAACCACAAATGATGAGATGATCCTAATTTACCTTCAGAATTTCATACTCCTACGACGTCGTTGAGTGTAACCCACCCCATTGTTGGTTGCAAATCCTCTCTCTAGAAAGAAAGAATAAAAAAGAAAGAGAGGAAAGTTGAAACAACAAAAACCAGAGGAGAGAGAAAATGAGCTTGTCGACGGCGTCGTTTTTGGCGAGAAGAGCAGCACAGAAACAGAAGGTCCGACTTCTCTACCGCCGTTGTCTCCGGGATACTCTCAATTGGGCCGTTCATCGTCATCTCTTCTACGAAGATGCTGATGAGCTCCGGAAAAAGTTCGAGGCTAACAAAAATCTGCAAGATCCTGATGCAATTGACAAAATGATTGCTGTTGGTGAATCTGAGTACAATAAGTGGAGGCACCCTGATCCTTATATTGTTCCATGGGCTCCTGGCGGTTCAAAGTTCTGCAGAAACCCAGAGCCACCTAAAGGGATTGAGATTATTTACGACTATGGCCAAGAAGAGGTCGAGCCAAGGTAGCTGCATATCTTTAATGCAGTAAGTAAGGTAATATGAAAATTACCCTGGCCGTGGTGGGTAGATAATGATGAAGAGTCATCTTCCCGTTTGCATTTACCTGCGTTTCAAACATTTGAGATATTGAGTTTCTCGTTTTGTAATTTACTTAGGTTGTTTGCAGTCCGCAGTTGATGTTAGCTGTTGGGGAAAATTTGTGCACATGATTTGTTGATCTTCTAAAGAATTGAATAATTTACTCGAATGAAAATAAGTTTGACCTTTCTAAAGGCATCAGCCCATGGGTTTTGTAGTAGCGGATCGGTGGTGGTGACTCAGGATTTTATCCATTTTGACTTAAAGAGTAGCCAGATTGTTAACTCCTAGAATGGTGGGACAGGGAAAACTGTCCTAATTGCCATGAAACCTCATTGTTGTGAAAACACATACAGCTTGACTGCTAGGAAGTTGTCAACACTCGGAGTCTTTAGGCTCACGACGGGAAATGGGAAATGGGAAATGCGAAATGGTTGATGAAACCTGAAAGTTGCGGTAAATTTGAGAATATCTTGTAAAATGATGGTGGTAGAGAATAGACCTGGTTATTGGACAGGGTAGTCCAATGGATATAGGGTTAGTGTCAAGTTAATAGGGCTTTTATTGGGTAGGGCTCTTATTGGACAGGACCTTTATTGGACAGGGTCATTATAGGGTCAAACTTATACTACAATTATTTTGAAAATAAAAATAGTAATGATACAAAAAATTACGTGCATAGCTTCGTATTTAATTGTACTTGCACATGGCTCTTTTGTTTTTCATTTTTCATTGCTCGTTTATTGACCCGCCCACTAATGACCCGCTATTGACCCGCGACCCGCTTTTGACCCGCCTATTATCGACCCTTTAAAAATGACCCTTTCAATACCCGACCCTCTTTTGACCCGCACCGACCCTGACCCGCCCCGCCCGATAACCAGGTCTA

Coding sequence (CDS)

ATGAGCTTGTCGACGGCGTCGTTTTTGGCGAGAAGAGCAGCACAGAAACAGAAGGTCCGACTTCTCTACCGCCGTTGTCTCCGGGATACTCTCAATTGGGCCGTTCATCGTCATCTCTTCTACGAAGATGCTGATGAGCTCCGGAAAAAGTTCGAGGCTAACAAAAATCTGCAAGATCCTGATGCAATTGACAAAATGATTGCTGTTGGTGAATCTGAGTACAATAAGTGGAGGCACCCTGATCCTTATATTGTTCCATGGGCTCCTGGCGGTTCAAAGTTCTGCAGAAACCCAGAGCCACCTAAAGGGATTGAGATTATTTACGACTATGGCCAAGAAGAGGTCGAGCCAAGGTAG

Protein sequence

MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDPDAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEEVEPR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06053.1Spo06053.1mRNA


Homology
[Close]
BLAST of Spo06053.1 vs. NCBI nr
Match: gi|902236632|gb|KNA24471.1| (hypothetical protein SOVF_015350 [Spinacia oleracea])

HSP 1 Score: 249.6 bits (636), Expect = 2.700e-63
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1 

		  

Query: 1   MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDP 60
           MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDP
Sbjct: 1   MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDP 60

Query: 61  DAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEEVEPR 119
           DAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEEVEPR
Sbjct: 61  DAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEEVEPR 118
[Close]
BLAST of Spo06053.1 vs. NCBI nr
Match: gi|731358449|ref|XP_010690756.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 221.5 bits (563), Expect = 7.900e-55
Identity = 102/116 (87.93%), Postives = 111/116 (95.69%), Query Frame = 1 

		  

Query: 1   MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDP 60
           MSLSTAS+LARRAAQKQ+VR+LYR+ LR+TLNWAVHRHLFYEDADELRKKFE NKNLQD 
Sbjct: 1   MSLSTASYLARRAAQKQRVRILYRKALRETLNWAVHRHLFYEDADELRKKFEVNKNLQDL 60

Query: 61  DAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEEVE 117
           DAID+MIA GE+E+NKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIY+YGQEE E
Sbjct: 61  DAIDRMIAAGEAEHNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYNYGQEEAE 116
[Close]
BLAST of Spo06053.1 vs. NCBI nr
Match: gi|747090340|ref|XP_011092854.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 198.7 bits (504), Expect = 5.500e-48
Identity = 88/114 (77.19%), Postives = 104/114 (91.23%), Query Frame = 1 

		  

Query: 1   MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDP 60
           MSL+TAS+LARRAAQK++VR+LYRR L+DTLNWAVHRHLFY DAD LR+KFE N+N++D 
Sbjct: 1   MSLATASYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYPDADALREKFETNRNVEDI 60

Query: 61  DAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEE 115
           + ID+MIA GE+ YNKWRHPDPYIVPWAPGG+KFCRNP PP GIEIIYDYG+E+
Sbjct: 61  ELIDRMIAAGEATYNKWRHPDPYIVPWAPGGTKFCRNPTPPPGIEIIYDYGRED 114
[Close]
BLAST of Spo06053.1 vs. NCBI nr
Match: gi|747082352|ref|XP_011088493.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 195.7 bits (496), Expect = 4.700e-47
Identity = 86/114 (75.44%), Postives = 104/114 (91.23%), Query Frame = 1 

		  

Query: 1   MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDP 60
           MS++TAS+L RRAAQK++VR+LYRR L+DTLNWAVHRHLFY DAD LR+KFEAN+N++D 
Sbjct: 1   MSVATASYLVRRAAQKERVRILYRRALKDTLNWAVHRHLFYPDADALREKFEANRNVEDI 60

Query: 61  DAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEE 115
           + ID+MIA GE+ YNKWRHPDPYIVPWAPGG+KFCRNP PP GIEIIY+YG+E+
Sbjct: 61  ELIDRMIAAGEATYNKWRHPDPYIVPWAPGGTKFCRNPTPPPGIEIIYNYGRED 114
[Close]
BLAST of Spo06053.1 vs. NCBI nr
Match: gi|743793493|ref|XP_011047299.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 194.9 bits (494), Expect = 7.900e-47
Identity = 85/114 (74.56%), Postives = 104/114 (91.23%), Query Frame = 1 

		  

Query: 1   MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDP 60
           MS++ A +LARRAAQK++VR+LYRR L+DTLNWAVHRHLFYEDAD LR +FE NK+++DP
Sbjct: 1   MSVAAAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYEDADRLRARFENNKHVEDP 60

Query: 61  DAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEE 115
           D ID+MIA GE++YNKWRHPDPYIVPWAPGGSKF RNP PP+GIEI+Y+YG+E+
Sbjct: 61  DTIDRMIADGEAQYNKWRHPDPYIVPWAPGGSKFTRNPTPPEGIEIVYNYGRED 114
[Close]
BLAST of Spo06053.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RY72_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_015350 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.900e-63
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1 

		  

Query: 1   MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDP 60
           MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDP
Sbjct: 1   MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDP 60

Query: 61  DAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEEVEPR 119
           DAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEEVEPR
Sbjct: 61  DAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEEVEPR 118
[Close]
BLAST of Spo06053.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BH62_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g216410 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 5.500e-55
Identity = 102/116 (87.93%), Postives = 111/116 (95.69%), Query Frame = 1 

		  

Query: 1   MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDP 60
           MSLSTAS+LARRAAQKQ+VR+LYR+ LR+TLNWAVHRHLFYEDADELRKKFE NKNLQD 
Sbjct: 1   MSLSTASYLARRAAQKQRVRILYRKALRETLNWAVHRHLFYEDADELRKKFEVNKNLQDL 60

Query: 61  DAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEEVE 117
           DAID+MIA GE+E+NKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIY+YGQEE E
Sbjct: 61  DAIDRMIAAGEAEHNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYNYGQEEAE 116
[Close]
BLAST of Spo06053.1 vs. UniProtKB/TrEMBL
Match: B9HRF5_POPTR (Complex 1 family protein OS=Populus trichocarpa GN=POPTR_0009s12750g PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 9.400e-47
Identity = 85/114 (74.56%), Postives = 104/114 (91.23%), Query Frame = 1 

		  

Query: 1   MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDP 60
           MS++ A +LARRAAQK++VR+LYRR L+DTLNWAVHRHLFYEDAD LR +FE NK+++DP
Sbjct: 1   MSVAAAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYEDADLLRSRFENNKHVEDP 60

Query: 61  DAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEE 115
           D ID+MI+ GE++YNKWRHPDPYIVPWAPGGSKF RNP PP+GIEI+Y+YG+EE
Sbjct: 61  DTIDRMISDGEAQYNKWRHPDPYIVPWAPGGSKFTRNPTPPEGIEIVYNYGREE 114
[Close]
BLAST of Spo06053.1 vs. UniProtKB/TrEMBL
Match: A0A068TLX8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014193001 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.200e-46
Identity = 87/114 (76.32%), Postives = 102/114 (89.47%), Query Frame = 1 

		  

Query: 1   MSLSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDP 60
           MSL +AS+LARRAAQK++VR+LYRR L+DTLNWAVHRHLFY DAD LR+KFEANK++QD 
Sbjct: 1   MSLGSASYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYPDADALREKFEANKDVQDL 60

Query: 61  DAIDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEE 115
           + ID+MIA GE  YNKWRHPDPY+VPWAPGGSKF RNP PP GIEI+YDYG+E+
Sbjct: 61  ETIDRMIAAGEVTYNKWRHPDPYVVPWAPGGSKFHRNPTPPSGIEILYDYGRED 114
[Close]
BLAST of Spo06053.1 vs. UniProtKB/TrEMBL
Match: A0A0D2RT13_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G248500 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.600e-46
Identity = 86/111 (77.48%), Postives = 101/111 (90.99%), Query Frame = 1 

		  

Query: 4   STASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDPDAI 63
           STA++LARRAAQK++VR+LYRR L+DTLNWAVHRHLFY+DA +LR+KFEANK+++D D I
Sbjct: 5   STAAYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYQDASDLREKFEANKHVEDLDTI 64

Query: 64  DKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEE 115
           DKMI  GE+ YNKWRHPDPYIVPWAPGGSKF RNP PP GIEI+YDYG+EE
Sbjct: 65  DKMIDAGEATYNKWRHPDPYIVPWAPGGSKFTRNPVPPSGIEILYDYGREE 115
[Close]
BLAST of Spo06053.1 vs. ExPASy Swiss-Prot
Match: NDUB9_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Arabidopsis thaliana GN=CIB22 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 7.900e-47
Identity = 81/112 (72.32%), Postives = 100/112 (89.29%), Query Frame = 1 

		  

Query: 3   LSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDPDA 62
           +STA++ ARRAAQK++VR+LYRR L+DTLNWAVHRH+FY DA +LR+KF  N++++D D 
Sbjct: 4   VSTAAYFARRAAQKERVRILYRRALKDTLNWAVHRHIFYRDASDLREKFNVNQDVEDVDR 63

Query: 63  IDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEE 115
           IDK+IA GE+EYNKWRHPDPYIVPWAPGGSKFCRNP PP GIEI+Y+YG E+
Sbjct: 64  IDKLIAHGEAEYNKWRHPDPYIVPWAPGGSKFCRNPTPPAGIEIVYNYGLED 115
[Close]
BLAST of Spo06053.1 vs. ExPASy Swiss-Prot
Match: NDUB9_MOUSE (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Mus musculus GN=Ndufb9 PE=1 SV=3)

HSP 1 Score: 62.0 bits (149), Expect = 5.000e-9
Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = 1 

		  

Query: 16 KQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDPDAIDKMIAVGESEYN 75
          +QKV  LY+R LR   +W +HR  +   A  +R +FE +KN +D     +++   E E+ 
Sbjct: 13 QQKVLRLYKRALRHLESWCIHRDKYRYFACLMRARFEEHKNEKDMMRATQLLREAEEEFW 72

Query: 76 KWRHPDPYIVPWAPGGSKFCR 97
          + +HP PYI P +PGG+ F R
Sbjct: 73 QNQHPQPYIFPDSPGGTSFER 93
[Close]
BLAST of Spo06053.1 vs. ExPASy Swiss-Prot
Match: NDUB9_BOVIN (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Bos taurus GN=NDUFB9 PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 1.500e-8
Identity = 33/94 (35.11%), Postives = 53/94 (56.38%), Query Frame = 1 

		  

Query: 3  LSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDPDA 62
          LS+ ++L  +    QKV  LY+R LR   +W +HR  +   A  LR +F+ +KN +D   
Sbjct: 4  LSSGAYLTHQ----QKVLRLYKRALRHLESWCIHRDKYRYFACLLRARFDEHKNEKDMVK 63

Query: 63 IDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCR 97
            +++   E E+   +HP PYI P +PGG+ + R
Sbjct: 64 ATQLLREAEEEFWHGQHPQPYIFPESPGGTSYER 93
[Close]
BLAST of Spo06053.1 vs. ExPASy Swiss-Prot
Match: NDUB9_GORGO (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Gorilla gorilla gorilla GN=NDUFB9 PE=2 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 5.600e-8
Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 1 

		  

Query: 7  SFLA--RRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDPDAID 66
          +FLA  R    +QKV  LY+R LR   +W V R  +   A  +R +FE +KN +D     
Sbjct: 2  AFLASGRYLTHQQKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKDMAKAT 61

Query: 67 KMIAVGESEYNKWRHPDPYIVPWAPGGSKFCR 97
          +++   E E+   +HP PYI P +PGG+ + R
Sbjct: 62 QLLKEAEEEFWYRQHPQPYIFPDSPGGTSYER 93
[Close]
BLAST of Spo06053.1 vs. ExPASy Swiss-Prot
Match: NDUB9_PONAB (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Pongo abelii GN=NDUFB9 PE=2 SV=3)

HSP 1 Score: 58.2 bits (139), Expect = 7.300e-8
Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 1 

		  

Query: 7  SFLARRA--AQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDPDAID 66
          +FLA  A    +QKV  LY+R LR   +W V R  +   A  +R +FE +KN +D     
Sbjct: 2  AFLASGAYLTHRQKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKDMVRAT 61

Query: 67 KMIAVGESEYNKWRHPDPYIVPWAPGGSKFCR 97
          +++   E E+   +HP PYI P +PGG+ + R
Sbjct: 62 QLLKEAEEEFWYRQHPQPYIFPDSPGGTSYER 93
[Close]
BLAST of Spo06053.1 vs. TAIR (Arabidopsis)
Match: AT4G34700.1 (LYR family of Fe/S cluster biogenesis protein)

HSP 1 Score: 187.6 bits (475), Expect = 4.500e-48
Identity = 81/112 (72.32%), Postives = 100/112 (89.29%), Query Frame = 1 

		  

Query: 3   LSTASFLARRAAQKQKVRLLYRRCLRDTLNWAVHRHLFYEDADELRKKFEANKNLQDPDA 62
           +STA++ ARRAAQK++VR+LYRR L+DTLNWAVHRH+FY DA +LR+KF  N++++D D 
Sbjct: 4   VSTAAYFARRAAQKERVRILYRRALKDTLNWAVHRHIFYRDASDLREKFNVNQDVEDVDR 63

Query: 63  IDKMIAVGESEYNKWRHPDPYIVPWAPGGSKFCRNPEPPKGIEIIYDYGQEE 115
           IDK+IA GE+EYNKWRHPDPYIVPWAPGGSKFCRNP PP GIEI+Y+YG E+
Sbjct: 64  IDKLIAHGEAEYNKWRHPDPYIVPWAPGGSKFCRNPTPPAGIEIVYNYGLED 115
The following BLAST results are available for this feature:
BLAST of Spo06053.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902236632|gb|KNA24471.1|2.7e-63100.hypothetical protein SOVF_0153... [more]
gi|731358449|ref|XP_010690756.1|7.9e-5587.9PREDICTED: NADH dehydrogenase ... [more]
gi|747090340|ref|XP_011092854.1|5.5e-4877.1PREDICTED: NADH dehydrogenase ... [more]
gi|747082352|ref|XP_011088493.1|4.7e-4775.4PREDICTED: NADH dehydrogenase ... [more]
gi|743793493|ref|XP_011047299.1|7.9e-4774.5PREDICTED: NADH dehydrogenase ... [more]
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BLAST of Spo06053.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RY72_SPIOL1.9e-63100.Uncharacterized protein OS=Spi... [more]
A0A0J8BH62_BETVU5.5e-5587.9Uncharacterized protein OS=Bet... [more]
B9HRF5_POPTR9.4e-4774.5Complex 1 family protein OS=Po... [more]
A0A068TLX8_COFCA1.2e-4676.3Uncharacterized protein OS=Cof... [more]
A0A0D2RT13_GOSRA1.6e-4677.4Uncharacterized protein OS=Gos... [more]
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BLAST of Spo06053.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
NDUB9_ARATH7.9e-4772.3NADH dehydrogenase [ubiquinone... [more]
NDUB9_MOUSE5.0e-938.2NADH dehydrogenase [ubiquinone... [more]
NDUB9_BOVIN1.5e-835.1NADH dehydrogenase [ubiquinone... [more]
NDUB9_GORGO5.6e-836.9NADH dehydrogenase [ubiquinone... [more]
NDUB9_PONAB7.3e-836.9NADH dehydrogenase [ubiquinone... [more]
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BLAST of Spo06053.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G34700.14.5e-4872.3LYR family of Fe/S cluster bio... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 18..73
score: 4.6
NoneNo IPR availablePANTHERPTHR12868NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNITcoord: 3..114
score: 4.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0007033 vacuole organization
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0009853 photorespiration
biological_process GO:0008152 metabolic process
biological_process GO:0043248 proteasome assembly
biological_process GO:0019521 D-gluconate metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0006094 gluconeogenesis
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006096 glycolytic process
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0051788 response to misfolded protein
biological_process GO:0009651 response to salt stress
biological_process GO:0009407 toxin catabolic process
biological_process GO:0006486 protein glycosylation
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0007030 Golgi organization
biological_process GO:0006782 protoporphyrinogen IX biosynthetic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0001510 RNA methylation
biological_process GO:0042545 cell wall modification
biological_process GO:0006412 translation
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0000902 cell morphogenesis
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0016049 cell growth
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005829 cytosol
cellular_component GO:0009507 chloroplast
cellular_component GO:0005576 extracellular region
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005634 nucleus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0000502 proteasome complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005618 cell wall
cellular_component GO:0009506 plasmodesma
cellular_component GO:0022627 cytosolic small ribosomal subunit
molecular_function GO:0050661 NADP binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005515 protein binding
molecular_function GO:0004298 threonine-type endopeptidase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0004853 uroporphyrinogen decarboxylase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo057310.77Barchart | Table
Spo252300.76Barchart | Table
Spo271020.74Barchart | Table
Spo096740.73Barchart | Table
Spo097520.73Barchart | Table
Spo064320.73Barchart | Table
Spo273740.72Barchart | Table
Spo230710.72Barchart | Table
Spo245900.71Barchart | Table
Spo231480.71Barchart | Table
Spo198740.70Barchart | Table
Spo020850.70Barchart | Table
Spo087720.70Barchart | Table
Spo140840.70Barchart | Table
Spo081970.70Barchart | Table
Spo064650.70Barchart | Table
Spo191720.70Barchart | Table
Spo087990.69Barchart | Table
Spo123760.69Barchart | Table
Spo229550.69Barchart | Table
Spo059900.69Barchart | Table
Spo227600.68Barchart | Table
Spo149800.68Barchart | Table
Spo150870.68Barchart | Table
Spo063140.68Barchart | Table
Spo020680.68Barchart | Table
Spo258380.67Barchart | Table
Spo042540.67Barchart | Table
Spo053410.67Barchart | Table
Spo055310.67Barchart | Table
Spo220520.67Barchart | Table
Spo231230.67Barchart | Table
Spo019140.67Barchart | Table
Spo038670.67Barchart | Table
Spo076190.67Barchart | Table
Spo089970.67Barchart | Table
Spo115430.67Barchart | Table
Spo131070.67Barchart | Table
Spo300130.67Barchart | Table
Spo149420.67Barchart | Table
Spo235180.66Barchart | Table
Spo013970.66Barchart | Table
Spo024070.66Barchart | Table
Spo069620.66Barchart | Table
Spo073900.66Barchart | Table
Spo096040.66Barchart | Table
Spo119110.66Barchart | Table
Spo134900.66Barchart | Table
Spo154200.66Barchart | Table
Spo173860.66Barchart | Table
Spo200710.66Barchart | Table
Spo206860.66Barchart | Table
Spo216910.66Barchart | Table
Spo006150.66Barchart | Table
Spo012610.65Barchart | Table
Spo151490.65Barchart | Table
Spo123640.65Barchart | Table
Spo075860.65Barchart | Table
Spo259080.65Barchart | Table
Spo057280.65Barchart | Table
Spo014370.65Barchart | Table
Spo154260.65Barchart | Table