Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAATGTTGACGATGGACTGGAACAACAATGGCTCGAGGAATATTACTCCGGTGAGTTTTACTCATTTCATCTCATTTTTTTTTATACTTCAGATTATTTCCTTTAAAAACAATCACTTATGCAAATTCGAGATATTAAGAGTCAGTCAAGTCATCGTGTGTTATAGAGTGTAAAAGTTAACATGATTCAATATTCAAAGAACGGGTATTTTTCTTTTACATTAATACTCCTCCGTTTTATAAAAATCTTTATGGTTACTATTTGCACAAATATTGAGACAAAAGTTAAAAAGTTGGTTGAATATAATAAAAGATGGATAAAGTAAGAGAAATGTATAAAAATGTGGTTGAGTGATAGAGCATAAAACTAATATTAGGACTTCAACCATCTGCTTAAGTTTTTAGTTGGGTTGGTTCTTTGACACCGAGTGTAAGAAAAAATGAATAAAATAAGTGAATTTTTAAATATTATTAGGTTAAAAGGGTGATGTTTATGTACGGAAATAAAATAAAACAAAGTGTAAAAAATATTATAAAACGAAATGAAACGAAAAGTAGTATAGAGTTGTGTTATTTGATGGTCAATGAACATCGGGGGCTTGCGTCAATAGTGCAGATTCTAGATTTTATCGCCTAGACTCATCCGGTATGTCCGACACTCCTACGGGTCCTACCCACCATGTGGCTGGGTGGATATTGACCCACGAAGATACAAAAAACGAAAATGTGGGCTCTTGATTTTGACAGCATCTTTTGTAAATTCCTGCTTTCTACCTGTTCTACACGTGAGGCACTAAGGCTCTTGTTTACATGATTTGGACAGCATGTATGTTCATTATACGAGTAGTTATGCACATCAACTAATTGAATTCTATACATACCGTTTACTTCTCAACGGTTGGACTTGTAAAGAGAAGTATTAATTATCATTTATCAATATTGCCAATTTGTCATAATCACGAATGTGATGGGATCCTATTAATCAACATAAATGAAGAAAAACAAGTCATAGAGTTTATAATTTAGTAAACTTCTTCAAGATTGTGACTTATGGAGAATTTCTCAGTTAGAAACTTAAATGTTTAGTATTCAGTTGTTATCGTTTTATCAATCAACACTGAAATAATGATCACTATCACCCTTGGTAGATTCAGAGATTAAAATATATGTAAAACAATGTTCTGTGTTATATGTAACATATGAACCATAAAAGCTAGCCGAACCCATCATATTGTCAAATTGGTATATAAAAATAAGTGTTTCTGTCATTGGGTTTTGGACTTTTGCCTTCATGACTTCATCATCAACACATTCTGGAGTTTGAATTGATTATGACCTTGACTTTTTAAATTACTTTGGGTCGAAACATTCAAGATTTTAAAAGTTGTTCAGTCTTGAACTGAAGTGTTGTTAAATGCTAATGCTTATTTTTCCTGCAGGGTGCACATTACAGACACTTCTCAGAATCCTCACCATTGAACACCAGCAAAGAAGGCACTGAACCCATACCAATGTGGCCATGGTTCCTCTTTTTAGCAGGCGCAATGTGTTGCTTAGTTTTCAGCTCAATCTCTCACCTCCTCGCCTGCCATTCAAAGCGTCTAACCCTCTTCTTCTGGCGTTTAGACTACGCAGGAATCTCAGTCATGATAGTCTGCTCTTTCTATGCACCAGTTTACTACTCCTTCTATTGCCAACCTTTGTTTAGCCTCTTCTACCTCACTTCCATAACCATTCTAGGCATTCTTGCTACCACTACTCTCATCACTCCCTCTCTTTGTTCCCCACGTTTCCGGGCTTTTCGGGCCACCCTTTTCCTTGGCATGGGTTTCTTCGGGCTGATACCTGCTCTTCATGCAGCTGCACTCCATTGGGATCATCCACAGATGTTAATAGCCCTTGTGTATGAGGTACTTATGGGTATCTTGTATGCAACTGGAGCTTGGTTTTATGTTAGTAGGGTCCCTGAACGTTGGAAACCAGGTGTTTTTGATCTTGCTGGTCACAGTCATCAGATTTTTCATATGTTTGTTGTTGGTGGTGCTCTCACTCACAGTGCAGCTATTATGATTATTCTGCACTGGAGACAGGGAATGGCTACTTGTTTTTAG ATGACAATGTTGACGATGGACTGGAACAACAATGGCTCGAGGAATATTACTCCGGGTGCACATTACAGACACTTCTCAGAATCCTCACCATTGAACACCAGCAAAGAAGGCACTGAACCCATACCAATGTGGCCATGGTTCCTCTTTTTAGCAGGCGCAATGTGTTGCTTAGTTTTCAGCTCAATCTCTCACCTCCTCGCCTGCCATTCAAAGCGTCTAACCCTCTTCTTCTGGCGTTTAGACTACGCAGGAATCTCAGTCATGATAGTCTGCTCTTTCTATGCACCAGTTTACTACTCCTTCTATTGCCAACCTTTGTTTAGCCTCTTCTACCTCACTTCCATAACCATTCTAGGCATTCTTGCTACCACTACTCTCATCACTCCCTCTCTTTGTTCCCCACGTTTCCGGGCTTTTCGGGCCACCCTTTTCCTTGGCATGGGTTTCTTCGGGCTGATACCTGCTCTTCATGCAGCTGCACTCCATTGGGATCATCCACAGATGTTAATAGCCCTTGTGTATGAGGTACTTATGGGTATCTTGTATGCAACTGGAGCTTGGTTTTATGTTAGTAGGGTCCCTGAACGTTGGAAACCAGGTGTTTTTGATCTTGCTGGTCACAGTCATCAGATTTTTCATATGTTTGTTGTTGGTGGTGCTCTCACTCACAGTGCAGCTATTATGATTATTCTGCACTGGAGACAGGGAATGGCTACTTGTTTTTAG ATGACAATGTTGACGATGGACTGGAACAACAATGGCTCGAGGAATATTACTCCGGGTGCACATTACAGACACTTCTCAGAATCCTCACCATTGAACACCAGCAAAGAAGGCACTGAACCCATACCAATGTGGCCATGGTTCCTCTTTTTAGCAGGCGCAATGTGTTGCTTAGTTTTCAGCTCAATCTCTCACCTCCTCGCCTGCCATTCAAAGCGTCTAACCCTCTTCTTCTGGCGTTTAGACTACGCAGGAATCTCAGTCATGATAGTCTGCTCTTTCTATGCACCAGTTTACTACTCCTTCTATTGCCAACCTTTGTTTAGCCTCTTCTACCTCACTTCCATAACCATTCTAGGCATTCTTGCTACCACTACTCTCATCACTCCCTCTCTTTGTTCCCCACGTTTCCGGGCTTTTCGGGCCACCCTTTTCCTTGGCATGGGTTTCTTCGGGCTGATACCTGCTCTTCATGCAGCTGCACTCCATTGGGATCATCCACAGATGTTAATAGCCCTTGTGTATGAGGTACTTATGGGTATCTTGTATGCAACTGGAGCTTGGTTTTATGTTAGTAGGGTCCCTGAACGTTGGAAACCAGGTGTTTTTGATCTTGCTGGTCACAGTCATCAGATTTTTCATATGTTTGTTGTTGGTGGTGCTCTCACTCACAGTGCAGCTATTATGATTATTCTGCACTGGAGACAGGGAATGGCTACTTGTTTTTAG MTMLTMDWNNNGSRNITPGAHYRHFSESSPLNTSKEGTEPIPMWPWFLFLAGAMCCLVFSSISHLLACHSKRLTLFFWRLDYAGISVMIVCSFYAPVYYSFYCQPLFSLFYLTSITILGILATTTLITPSLCSPRFRAFRATLFLGMGFFGLIPALHAAALHWDHPQMLIALVYEVLMGILYATGAWFYVSRVPERWKPGVFDLAGHSHQIFHMFVVGGALTHSAAIMIILHWRQGMATCF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo06064.1 vs. NCBI nr
Match: gi|902227736|gb|KNA20819.1| (hypothetical protein SOVF_049150 [Spinacia oleracea]) HSP 1 Score: 499.6 bits (1285), Expect = 3.100e-138 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1
BLAST of Spo06064.1 vs. NCBI nr
Match: gi|731352660|ref|XP_010687652.1| (PREDICTED: heptahelical transmembrane protein 2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 397.5 bits (1020), Expect = 1.600e-107 Identity = 191/241 (79.25%), Postives = 213/241 (88.38%), Query Frame = 1
BLAST of Spo06064.1 vs. NCBI nr
Match: gi|225445767|ref|XP_002274323.1| (PREDICTED: heptahelical transmembrane protein 2 [Vitis vinifera]) HSP 1 Score: 313.5 bits (802), Expect = 3.100e-82 Identity = 147/238 (61.76%), Postives = 183/238 (76.89%), Query Frame = 1
BLAST of Spo06064.1 vs. NCBI nr
Match: gi|147816024|emb|CAN61543.1| (hypothetical protein VITISV_008489 [Vitis vinifera]) HSP 1 Score: 312.0 bits (798), Expect = 9.100e-82 Identity = 147/238 (61.76%), Postives = 182/238 (76.47%), Query Frame = 1
BLAST of Spo06064.1 vs. NCBI nr
Match: gi|1000948121|ref|XP_002528385.2| (PREDICTED: heptahelical transmembrane protein 2 [Ricinus communis]) HSP 1 Score: 309.3 bits (791), Expect = 5.900e-81 Identity = 145/235 (61.70%), Postives = 184/235 (78.30%), Query Frame = 1
BLAST of Spo06064.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RPJ9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_049150 PE=4 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 2.100e-138 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1
BLAST of Spo06064.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BPX8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g191750 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 1.100e-107 Identity = 191/241 (79.25%), Postives = 213/241 (88.38%), Query Frame = 1
BLAST of Spo06064.1 vs. UniProtKB/TrEMBL
Match: F6HYM5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00860 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 2.200e-82 Identity = 147/238 (61.76%), Postives = 183/238 (76.89%), Query Frame = 1
BLAST of Spo06064.1 vs. UniProtKB/TrEMBL
Match: A5BLW0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008489 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 6.300e-82 Identity = 147/238 (61.76%), Postives = 182/238 (76.47%), Query Frame = 1
BLAST of Spo06064.1 vs. UniProtKB/TrEMBL
Match: B9SQW6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1404930 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 4.100e-81 Identity = 145/235 (61.70%), Postives = 184/235 (78.30%), Query Frame = 1
BLAST of Spo06064.1 vs. ExPASy Swiss-Prot
Match: HHP2_ARATH (Heptahelical transmembrane protein 2 OS=Arabidopsis thaliana GN=HHP2 PE=2 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 2.200e-75 Identity = 134/202 (66.34%), Postives = 164/202 (81.19%), Query Frame = 1
BLAST of Spo06064.1 vs. ExPASy Swiss-Prot
Match: HHP3_ARATH (Heptahelical transmembrane protein 3 OS=Arabidopsis thaliana GN=HHP3 PE=2 SV=2) HSP 1 Score: 265.0 bits (676), Expect = 8.000e-70 Identity = 124/202 (61.39%), Postives = 153/202 (75.74%), Query Frame = 1
BLAST of Spo06064.1 vs. ExPASy Swiss-Prot
Match: ADPO2_ORYSJ (Heptahelical transmembrane protein ADIPOR2 OS=Oryza sativa subsp. japonica GN=ADIPOR2 PE=2 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 5.200e-61 Identity = 112/202 (55.45%), Postives = 144/202 (71.29%), Query Frame = 1
BLAST of Spo06064.1 vs. ExPASy Swiss-Prot
Match: HHP1_ARATH (Heptahelical transmembrane protein 1 OS=Arabidopsis thaliana GN=HHP1 PE=1 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 1.400e-58 Identity = 110/215 (51.16%), Postives = 143/215 (66.51%), Query Frame = 1
BLAST of Spo06064.1 vs. ExPASy Swiss-Prot
Match: HHP4_ARATH (Heptahelical transmembrane protein 4 OS=Arabidopsis thaliana GN=HHP4 PE=2 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 3.900e-56 Identity = 107/195 (54.87%), Postives = 129/195 (66.15%), Query Frame = 1
BLAST of Spo06064.1 vs. TAIR (Arabidopsis)
Match: AT4G30850.1 (heptahelical transmembrane protein2) HSP 1 Score: 283.5 bits (724), Expect = 1.200e-76 Identity = 134/202 (66.34%), Postives = 164/202 (81.19%), Query Frame = 1
BLAST of Spo06064.1 vs. TAIR (Arabidopsis)
Match: AT2G24150.1 (heptahelical protein 3) HSP 1 Score: 265.0 bits (676), Expect = 4.500e-71 Identity = 124/202 (61.39%), Postives = 153/202 (75.74%), Query Frame = 1
BLAST of Spo06064.1 vs. TAIR (Arabidopsis)
Match: AT5G20270.1 (heptahelical transmembrane protein1) HSP 1 Score: 227.6 bits (579), Expect = 8.000e-60 Identity = 110/215 (51.16%), Postives = 143/215 (66.51%), Query Frame = 1
BLAST of Spo06064.1 vs. TAIR (Arabidopsis)
Match: AT4G37680.1 (heptahelical protein 4) HSP 1 Score: 219.5 bits (558), Expect = 2.200e-57 Identity = 107/195 (54.87%), Postives = 129/195 (66.15%), Query Frame = 1
BLAST of Spo06064.1 vs. TAIR (Arabidopsis)
Match: AT4G38320.1 (heptahelical protein 5) HSP 1 Score: 208.4 bits (529), Expect = 5.000e-54 Identity = 103/187 (55.08%), Postives = 124/187 (66.31%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06064.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo06064.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo06064.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo06064.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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