Spo06123 (gene) | SpinachBase

Overview


Name	Spo06123
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 (Protein ORGAN BOUNDARY 10)
Location	SpoScf_00032 : 656772 .. 657579 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGACAAAAGGAGGAGAGGAAAAGAAAGCAACGAACCAAAAAAAGCACCCTCTTATTTCAAAAATGGGGTCCATACAAATATTGTCTGATCTTCTCCCCTCTCAAATCTTAAGATGTGACCTCCATCATCTTCTTCCCCCACTTCCATTACCCTCATTCACCATTTCTTGTCTCCTCCCCTCTTTCCTTTAATTCAAATATTTATTATTAAAGAAAATCTCAATTTTTTAACTAATAATTAATATGTCCAACATCACCAATTTCTCAGACGAACAACCCTCTGTACATGTAGTACAAATGATGTGTCCTGAAAACCACCAACAGGCCGTGGCGACTCCACCAGCCGCCCCGACACTAAGCCGATACGAGTCTCAGAAGCGGAGAGACTGGAACACTTTTGGGCAGTACTTAAGGAACATGAGGCCACCCGTGGCTGTAACACACTGCACGTGCCATCACGTGTTGGAGTTCCTTAGGTACCTTGATCAGTTTGGAAAAACTAAGGTTCACTTAAATGGTTGTACTTTTTTTGGGCAGCCTGACCCTCCTGCTCCTTGTAGCTGCCCGCTCCGGCAAGCTTGGGGTAGTCTCGATGCACTGATCGGACGGTTGCGAGCTGCGTACGAGGAACATGGTGGATCTCCTGAGTCGAACCCGTTTGGAAATGGGACGATCAGGGTTTACTTAAGGGAGGTCAAGGATTGTCAAGCTAAAGCAAGAGGAATTCCTTACAAGAAGAAAAAGAAGAAGAGGAAGGTTTTAAAATCATGTGATAATGGATCTTCTTCGAATCGTCGATTTTAA

mRNA sequence

ATGAGAGACAAAAGGAGGAGAGGAAAAGAAAGCAACGAACCAAAAAAAGCACCCTCTTATTTCAAAAATGGGGTCCATACAAATATTGTCTGATCTTCTCCCCTCTCAAATCTTAAGATGTGACCTCCATCATCTTCTTCCCCCACTTCCATTACCCTCATTCACCATTTCTTGTCTCCTCCCCTCTTTCCTTTAATTCAAATATTTATTATTAAAGAAAATCTCAATTTTTTAACTAATAATTAATATGTCCAACATCACCAATTTCTCAGACGAACAACCCTCTGTACATGTAGTACAAATGATGTGTCCTGAAAACCACCAACAGGCCGTGGCGACTCCACCAGCCGCCCCGACACTAAGCCGATACGAGTCTCAGAAGCGGAGAGACTGGAACACTTTTGGGCAGTACTTAAGGAACATGAGGCCACCCGTGGCTGTAACACACTGCACGTGCCATCACGTGTTGGAGTTCCTTAGGTACCTTGATCAGTTTGGAAAAACTAAGGTTCACTTAAATGGTTGTACTTTTTTTGGGCAGCCTGACCCTCCTGCTCCTTGTAGCTGCCCGCTCCGGCAAGCTTGGGGTAGTCTCGATGCACTGATCGGACGGTTGCGAGCTGCGTACGAGGAACATGGTGGATCTCCTGAGTCGAACCCGTTTGGAAATGGGACGATCAGGGTTTACTTAAGGGAGGTCAAGGATTGTCAAGCTAAAGCAAGAGGAATTCCTTACAAGAAGAAAAAGAAGAAGAGGAAGGTTTTAAAATCATGTGATAATGGATCTTCTTCGAATCGTCGATTTTAA

Coding sequence (CDS)

ATGTCCAACATCACCAATTTCTCAGACGAACAACCCTCTGTACATGTAGTACAAATGATGTGTCCTGAAAACCACCAACAGGCCGTGGCGACTCCACCAGCCGCCCCGACACTAAGCCGATACGAGTCTCAGAAGCGGAGAGACTGGAACACTTTTGGGCAGTACTTAAGGAACATGAGGCCACCCGTGGCTGTAACACACTGCACGTGCCATCACGTGTTGGAGTTCCTTAGGTACCTTGATCAGTTTGGAAAAACTAAGGTTCACTTAAATGGTTGTACTTTTTTTGGGCAGCCTGACCCTCCTGCTCCTTGTAGCTGCCCGCTCCGGCAAGCTTGGGGTAGTCTCGATGCACTGATCGGACGGTTGCGAGCTGCGTACGAGGAACATGGTGGATCTCCTGAGTCGAACCCGTTTGGAAATGGGACGATCAGGGTTTACTTAAGGGAGGTCAAGGATTGTCAAGCTAAAGCAAGAGGAATTCCTTACAAGAAGAAAAAGAAGAAGAGGAAGGTTTTAAAATCATGTGATAATGGATCTTCTTCGAATCGTCGATTTTAA

Protein sequence

MSNITNFSDEQPSVHVVQMMCPENHQQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQFGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNGTIRVYLREVKDCQAKARGIPYKKKKKKRKVLKSCDNGSSSNRRF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo06123.1	Spo06123.1	mRNA

Homology

[Close]

BLAST of Spo06123.1 vs. NCBI nr
Match: gi|902197086|gb|KNA13305.1| (hypothetical protein SOVF_117950 [Spinacia oleracea])

HSP 1 Score: 361.7 bits (927), Expect = 7.700e-97
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1


		  
Query: 19  MMCPENHQQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLR 78
           MMCPENHQQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLR
Sbjct: 1   MMCPENHQQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLR 60

Query: 79  YLDQFGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNP 138
           YLDQFGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNP
Sbjct: 61  YLDQFGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNP 120

Query: 139 FGNGTIRVYLREVKDCQAKARGIPYKKKKKKRKVLKSCDNGSSSNRRF 187
           FGNGTIRVYLREVKDCQAKARGIPYKKKKKKRKVLKSCDNGSSSNRRF
Sbjct: 121 FGNGTIRVYLREVKDCQAKARGIPYKKKKKKRKVLKSCDNGSSSNRRF 168

[Close]

BLAST of Spo06123.1 vs. NCBI nr
Match: gi|870852497|gb|KMT04412.1| (hypothetical protein BVRB_8g180880 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 318.9 bits (816), Expect = 5.800e-84
Identity = 155/192 (80.73%), Postives = 166/192 (86.46%), Query Frame = 1


		  
Query: 1   MSNITNFSDEQPSVHVVQMMCPENH-QQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNM 60
           M  IT F+ E P +  V  +CP+NH     A  P+ PTLSRYESQKRRDWNTFGQYLRNM
Sbjct: 1   METITKFATEPPPLPPV--ICPDNHIHHQAAAQPSTPTLSRYESQKRRDWNTFGQYLRNM 60

Query: 61  RPPVAVTHCTCHHVLEFLRYLDQFGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDAL 120
           RPP++VT CTCHHVLEFLRYLDQFGKTKVHL+GCTFFG PDPPAPCSCPLRQAWGSLDAL
Sbjct: 61  RPPISVTQCTCHHVLEFLRYLDQFGKTKVHLHGCTFFGMPDPPAPCSCPLRQAWGSLDAL 120

Query: 121 IGRLRAAYEEHGGSPESNPFGNGTIRVYLREVKDCQAKARGIPYKKKKKKRKVLK----- 180
           IGRLRAAYEEHGGSPESNPFGNGTIRVYLREVKDCQAKARGIPYKKKKKK++VLK     
Sbjct: 121 IGRLRAAYEEHGGSPESNPFGNGTIRVYLREVKDCQAKARGIPYKKKKKKKRVLKTITTT 180

Query: 181 SCDNGSSSNRRF 187
           +CD GSSSNRRF
Sbjct: 181 TCD-GSSSNRRF 189

[Close]

BLAST of Spo06123.1 vs. NCBI nr
Match: gi|661898802|emb|CDO96796.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 273.1 bits (697), Expect = 3.600e-70
Identity = 125/152 (82.24%), Postives = 137/152 (90.13%), Query Frame = 1


		  
Query: 23  ENHQQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQ 82
           ENHQQ    P    TLSRYESQKRRDWNTFGQYL+N RPPV+++ C C+HVLEFLRYLDQ
Sbjct: 26  ENHQQQ---PQTTTTLSRYESQKRRDWNTFGQYLKNQRPPVSLSQCNCNHVLEFLRYLDQ 85

Query: 83  FGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNG 142
           FGKTKVHL+GC FFGQPDPPAPC+CPLRQAWGSLDALIGRLRAAYEE+GGSPE+NPFGNG
Sbjct: 86  FGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNPFGNG 145

Query: 143 TIRVYLREVKDCQAKARGIPYKKKKKKRKVLK 175
            IRVYLREVK+CQAKARGIPYKKKKKK+  +K
Sbjct: 146 AIRVYLREVKECQAKARGIPYKKKKKKKNPIK 174

[Close]

BLAST of Spo06123.1 vs. NCBI nr
Match: gi|747077714|ref|XP_011085992.1| (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Sesamum indicum])

HSP 1 Score: 272.7 bits (696), Expect = 4.700e-70
Identity = 123/141 (87.23%), Postives = 133/141 (94.33%), Query Frame = 1


		  
Query: 30  ATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQFGKTKVH 89
           A+  A+P LSRYESQKRRDWNTFGQYL+N RPPV+++HC C+HVLEFLRYLDQFGKTKVH
Sbjct: 15  ASDQASPPLSRYESQKRRDWNTFGQYLKNQRPPVSLSHCNCNHVLEFLRYLDQFGKTKVH 74

Query: 90  LNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNGTIRVYLR 149
           L+GC FFGQPDPPAPC+CPLRQAWGSLDALIGRLRAAYEEHGGSPE+NPFGNG IRVYLR
Sbjct: 75  LHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLR 134

Query: 150 EVKDCQAKARGIPYKKKKKKR 171
           EVKD QAKARGIPYKKKKKKR
Sbjct: 135 EVKDSQAKARGIPYKKKKKKR 155

[Close]

BLAST of Spo06123.1 vs. NCBI nr
Match: gi|802786856|ref|XP_012091774.1| (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Jatropha curcas])

HSP 1 Score: 270.8 bits (691), Expect = 1.800e-69
Identity = 123/160 (76.88%), Postives = 140/160 (87.50%), Query Frame = 1


		  
Query: 23  ENHQQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQ 82
           ++H Q    P  AP LSRYESQKRRDWNTFGQYL+N RPPV+++ C C+HVL+FLRYLDQ
Sbjct: 19  DHHHQQQQLPQPAP-LSRYESQKRRDWNTFGQYLKNQRPPVSLSQCNCNHVLDFLRYLDQ 78

Query: 83  FGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNG 142
           FGKTKVHL+GC FFGQPDPPAPC+CPLRQAWGSLDALIGRLRAAYEEHGGSPE+NPFGNG
Sbjct: 79  FGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNG 138

Query: 143 TIRVYLREVKDCQAKARGIPYKKKKKKRKVLKSCDNGSSS 183
            IRVYLREV++CQAKARGIPYKKKKKK+  +K  ++   S
Sbjct: 139 AIRVYLREVRECQAKARGIPYKKKKKKKNQIKPREDAKPS 177

[Close]

BLAST of Spo06123.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1B2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_117950 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 5.400e-97
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1


		  
Query: 19  MMCPENHQQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLR 78
           MMCPENHQQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLR
Sbjct: 1   MMCPENHQQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLR 60

Query: 79  YLDQFGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNP 138
           YLDQFGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNP
Sbjct: 61  YLDQFGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNP 120

Query: 139 FGNGTIRVYLREVKDCQAKARGIPYKKKKKKRKVLKSCDNGSSSNRRF 187
           FGNGTIRVYLREVKDCQAKARGIPYKKKKKKRKVLKSCDNGSSSNRRF
Sbjct: 121 FGNGTIRVYLREVKDCQAKARGIPYKKKKKKRKVLKSCDNGSSSNRRF 168

[Close]

BLAST of Spo06123.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BTE8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g180880 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.000e-84
Identity = 155/192 (80.73%), Postives = 166/192 (86.46%), Query Frame = 1


		  
Query: 1   MSNITNFSDEQPSVHVVQMMCPENH-QQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNM 60
           M  IT F+ E P +  V  +CP+NH     A  P+ PTLSRYESQKRRDWNTFGQYLRNM
Sbjct: 1   METITKFATEPPPLPPV--ICPDNHIHHQAAAQPSTPTLSRYESQKRRDWNTFGQYLRNM 60

Query: 61  RPPVAVTHCTCHHVLEFLRYLDQFGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDAL 120
           RPP++VT CTCHHVLEFLRYLDQFGKTKVHL+GCTFFG PDPPAPCSCPLRQAWGSLDAL
Sbjct: 61  RPPISVTQCTCHHVLEFLRYLDQFGKTKVHLHGCTFFGMPDPPAPCSCPLRQAWGSLDAL 120

Query: 121 IGRLRAAYEEHGGSPESNPFGNGTIRVYLREVKDCQAKARGIPYKKKKKKRKVLK----- 180
           IGRLRAAYEEHGGSPESNPFGNGTIRVYLREVKDCQAKARGIPYKKKKKK++VLK     
Sbjct: 121 IGRLRAAYEEHGGSPESNPFGNGTIRVYLREVKDCQAKARGIPYKKKKKKKRVLKTITTT 180

Query: 181 SCDNGSSSNRRF 187
           +CD GSSSNRRF
Sbjct: 181 TCD-GSSSNRRF 189

[Close]

BLAST of Spo06123.1 vs. UniProtKB/TrEMBL
Match: A0A068TKT1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00013930001 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.500e-70
Identity = 125/152 (82.24%), Postives = 137/152 (90.13%), Query Frame = 1


		  
Query: 23  ENHQQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQ 82
           ENHQQ    P    TLSRYESQKRRDWNTFGQYL+N RPPV+++ C C+HVLEFLRYLDQ
Sbjct: 26  ENHQQQ---PQTTTTLSRYESQKRRDWNTFGQYLKNQRPPVSLSQCNCNHVLEFLRYLDQ 85

Query: 83  FGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNG 142
           FGKTKVHL+GC FFGQPDPPAPC+CPLRQAWGSLDALIGRLRAAYEE+GGSPE+NPFGNG
Sbjct: 86  FGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNPFGNG 145

Query: 143 TIRVYLREVKDCQAKARGIPYKKKKKKRKVLK 175
            IRVYLREVK+CQAKARGIPYKKKKKK+  +K
Sbjct: 146 AIRVYLREVKECQAKARGIPYKKKKKKKNPIK 174

[Close]

BLAST of Spo06123.1 vs. UniProtKB/TrEMBL
Match: A0A0D2S2A7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G162300 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.300e-69
Identity = 120/142 (84.51%), Postives = 133/142 (93.66%), Query Frame = 1


		  
Query: 33  PAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQFGKTKVHLNG 92
           P +P LSRYESQKRRDWNTFGQYL+N RPPVA++ C C+HVLEFLRYLDQFGKTKVHL+G
Sbjct: 47  PQSPPLSRYESQKRRDWNTFGQYLKNQRPPVALSQCNCNHVLEFLRYLDQFGKTKVHLHG 106

Query: 93  CTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNGTIRVYLREVK 152
           C FFGQPDPPAPC+CPLRQAWGSLDALIGRLRAAY+EHGGSPE+NPFGNG IRVYLREV+
Sbjct: 107 CVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYDEHGGSPETNPFGNGAIRVYLREVR 166

Query: 153 DCQAKARGIPYKKKKKKRKVLK 175
           DCQAKARGIPY+KKKKK+  +K
Sbjct: 167 DCQAKARGIPYRKKKKKKTQIK 188

[Close]

BLAST of Spo06123.1 vs. UniProtKB/TrEMBL
Match: A0A067JBB2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21567 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.300e-69
Identity = 123/160 (76.88%), Postives = 140/160 (87.50%), Query Frame = 1


		  
Query: 23  ENHQQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQ 82
           ++H Q    P  AP LSRYESQKRRDWNTFGQYL+N RPPV+++ C C+HVL+FLRYLDQ
Sbjct: 19  DHHHQQQQLPQPAP-LSRYESQKRRDWNTFGQYLKNQRPPVSLSQCNCNHVLDFLRYLDQ 78

Query: 83  FGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNG 142
           FGKTKVHL+GC FFGQPDPPAPC+CPLRQAWGSLDALIGRLRAAYEEHGGSPE+NPFGNG
Sbjct: 79  FGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNG 138

Query: 143 TIRVYLREVKDCQAKARGIPYKKKKKKRKVLKSCDNGSSS 183
            IRVYLREV++CQAKARGIPYKKKKKK+  +K  ++   S
Sbjct: 139 AIRVYLREVRECQAKARGIPYKKKKKKKNQIKPREDAKPS 177

[Close]

BLAST of Spo06123.1 vs. ExPASy Swiss-Prot
Match: LSH10_ARATH (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana GN=LSH10 PE=1 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.200e-66
Identity = 112/139 (80.58%), Postives = 128/139 (92.09%), Query Frame = 1


		  
Query: 32  PPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQFGKTKVHLN 91
           PP  P  SRYESQKRRDWNTFGQYL+N RPPV ++HC+C+HVL+FLRYLDQFGKTKVH+ 
Sbjct: 19  PPVTP--SRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVP 78

Query: 92  GCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNGTIRVYLREV 151
           GC F+GQP+PPAPC+CPLRQAWGSLDALIGRLRAAYEE+GG PE+NPF +G IRVYLREV
Sbjct: 79  GCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREV 138

Query: 152 KDCQAKARGIPYKKKKKKR 171
           ++CQAKARGIPYKKKKKK+
Sbjct: 139 RECQAKARGIPYKKKKKKK 155

[Close]

BLAST of Spo06123.1 vs. ExPASy Swiss-Prot
Match: G1L7_ORYSJ (Protein G1-like7 OS=Oryza sativa subsp. japonica GN=G1L7 PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.400e-60
Identity = 108/144 (75.00%), Postives = 120/144 (83.33%), Query Frame = 1


		  
Query: 28  AVATPPAAPT-LSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQFGKT 87
           AVA  P  P  LSRYESQKRRDWNTF QYLRN RPP+ +  C+  HV+EFLRYLDQFGKT
Sbjct: 18  AVAAAPQPPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVIEFLRYLDQFGKT 77

Query: 88  KVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNGTIRV 147
           KVH +GC F+GQP PP PC CPLRQAWGSLDALIGRLRAAYEE GG+PESNPF    +R+
Sbjct: 78  KVHASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGGTPESNPFAARAVRI 137

Query: 148 YLREVKDCQAKARGIPYKKKKKKR 171
           YLREV+D QAKARGIPY+KKK+KR
Sbjct: 138 YLREVRDSQAKARGIPYEKKKRKR 161

[Close]

BLAST of Spo06123.1 vs. ExPASy Swiss-Prot
Match: G1L7_ORYSI (Protein G1-like7 OS=Oryza sativa subsp. indica GN=OsI_10694 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.400e-60
Identity = 108/144 (75.00%), Postives = 120/144 (83.33%), Query Frame = 1


		  
Query: 28  AVATPPAAPT-LSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQFGKT 87
           AVA  P  P  LSRYESQKRRDWNTF QYLRN RPP+ +  C+  HV+EFLRYLDQFGKT
Sbjct: 18  AVAAAPQPPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVIEFLRYLDQFGKT 77

Query: 88  KVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNGTIRV 147
           KVH +GC F+GQP PP PC CPLRQAWGSLDALIGRLRAAYEE GG+PESNPF    +R+
Sbjct: 78  KVHASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGGTPESNPFAARAVRI 137

Query: 148 YLREVKDCQAKARGIPYKKKKKKR 171
           YLREV+D QAKARGIPY+KKK+KR
Sbjct: 138 YLREVRDSQAKARGIPYEKKKRKR 161

[Close]

BLAST of Spo06123.1 vs. ExPASy Swiss-Prot
Match: G1L2_ORYSJ (Protein G1-like2 OS=Oryza sativa subsp. japonica GN=G1L2 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 6.400e-59
Identity = 104/148 (70.27%), Postives = 122/148 (82.43%), Query Frame = 1


		  
Query: 35  APTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQFGKTKVHLNGCT 94
           AP  SRYESQKRRDW+TFGQYLRN RPP+ ++ C+  HVLEFLRYLDQFGKTKVH  GC 
Sbjct: 17  APRPSRYESQKRRDWHTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAAGCP 76

Query: 95  FFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNGTIRVYLREVKDC 154
           FFG P PPAPC CPLRQAWGSLDAL+GRLRAA+EEHGG PE+NPFG   +R+YLREV+D 
Sbjct: 77  FFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPEANPFGARAVRLYLREVRDS 136

Query: 155 QAKARGIPYKKKKKKRKVLKSCDNGSSS 183
           QAKARGI Y+KK++KR    S  + +++
Sbjct: 137 QAKARGIAYEKKRRKRPPTSSSSSQAAA 164

[Close]

BLAST of Spo06123.1 vs. ExPASy Swiss-Prot
Match: G1L2_ORYSI (Protein G1-like2 OS=Oryza sativa subsp. indica GN=OsI_24078 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 6.400e-59
Identity = 104/148 (70.27%), Postives = 122/148 (82.43%), Query Frame = 1


		  
Query: 35  APTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQFGKTKVHLNGCT 94
           AP  SRYESQKRRDW+TFGQYLRN RPP+ ++ C+  HVLEFLRYLDQFGKTKVH  GC 
Sbjct: 17  APRPSRYESQKRRDWHTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAAGCP 76

Query: 95  FFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNGTIRVYLREVKDC 154
           FFG P PPAPC CPLRQAWGSLDAL+GRLRAA+EEHGG PE+NPFG   +R+YLREV+D 
Sbjct: 77  FFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPEANPFGARAVRLYLREVRDS 136

Query: 155 QAKARGIPYKKKKKKRKVLKSCDNGSSS 183
           QAKARGI Y+KK++KR    S  + +++
Sbjct: 137 QAKARGIAYEKKRRKRPPTSSSSSQAAA 164

[Close]

BLAST of Spo06123.1 vs. TAIR (Arabidopsis)
Match: AT2G42610.1 (Protein of unknown function (DUF640))

HSP 1 Score: 252.7 bits (644), Expect = 1.800e-67
Identity = 112/139 (80.58%), Postives = 128/139 (92.09%), Query Frame = 1


		  
Query: 32  PPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQFGKTKVHLN 91
           PP  P  SRYESQKRRDWNTFGQYL+N RPPV ++HC+C+HVL+FLRYLDQFGKTKVH+ 
Sbjct: 19  PPVTP--SRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVP 78

Query: 92  GCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNGTIRVYLREV 151
           GC F+GQP+PPAPC+CPLRQAWGSLDALIGRLRAAYEE+GG PE+NPF +G IRVYLREV
Sbjct: 79  GCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREV 138

Query: 152 KDCQAKARGIPYKKKKKKR 171
           ++CQAKARGIPYKKKKKK+
Sbjct: 139 RECQAKARGIPYKKKKKKK 155

[Close]

BLAST of Spo06123.1 vs. TAIR (Arabidopsis)
Match: AT1G78815.1 (Protein of unknown function (DUF640))

HSP 1 Score: 228.4 bits (581), Expect = 3.600e-60
Identity = 103/150 (68.67%), Postives = 125/150 (83.33%), Query Frame = 1


		  
Query: 22  PENHQQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLD 81
           P+ HQ    +PP  P LSRYESQKRRDWNTF QYLRN +PPV ++ C  +H+L+FL+YLD
Sbjct: 24  PQPHQPQ--SPPNPPALSRYESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLD 83

Query: 82  QFGKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGN 141
           QFGKTKVH++GC FFGQ +P   C+CPL+QAWGSLDALIGRLRAA+EE+GG PE NPF  
Sbjct: 84  QFGKTKVHIHGCVFFGQVEPAGQCNCPLKQAWGSLDALIGRLRAAFEENGGLPERNPFAG 143

Query: 142 GTIRVYLREVKDCQAKARGIPYKKKKKKRK 172
           G IRV+LREV+D QAKARG+PYKK+KK++K
Sbjct: 144 GGIRVFLREVRDSQAKARGVPYKKRKKRKK 171

[Close]

BLAST of Spo06123.1 vs. TAIR (Arabidopsis)
Match: AT3G23290.2 (Protein of unknown function (DUF640))

HSP 1 Score: 228.4 bits (581), Expect = 3.600e-60
Identity = 103/133 (77.44%), Postives = 120/133 (90.23%), Query Frame = 1


		  
Query: 38  LSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQFGKTKVHLNGCTFFG 97
           LSRYE+QKRRDWNTFGQYLRN RPP++++ C+  HVLEFLRYLDQFGKTKVH + C FFG
Sbjct: 46  LSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFG 105

Query: 98  QPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNGTIRVYLREVKDCQAK 157
            P+PPAPC+CPLRQAWGSLDALIGRLRAA+EE+GGSPE+NPFG   +R+YLREV+D QAK
Sbjct: 106 HPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAK 165

Query: 158 ARGIPYKKKKKKR 171
           ARGI Y+KKK+KR
Sbjct: 166 ARGISYEKKKRKR 178

[Close]

BLAST of Spo06123.1 vs. TAIR (Arabidopsis)
Match: AT2G31160.1 (Protein of unknown function (DUF640))

HSP 1 Score: 225.7 bits (574), Expect = 2.300e-59
Identity = 102/144 (70.83%), Postives = 123/144 (85.42%), Query Frame = 1


		  
Query: 39  SRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQFGKTKVHLNGCTFFGQ 98
           SRYE+QKRRDWNTFGQYLRN RPP++++ C+  HVLEFLRYLDQFGKTKVH N C F+G 
Sbjct: 53  SRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGH 112

Query: 99  PDPPAPCSCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGNGTIRVYLREVKDCQAKA 158
           P+PPAPC CPLRQAWGSLDALIGRLRAA+EE+GG PE+NPFG   +R+YLREV+D Q+KA
Sbjct: 113 PNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDMQSKA 172

Query: 159 RGIPYKKKKKKRKVLKSCDNGSSS 183
           RG+ Y+KKK+KR +  S  + SS+
Sbjct: 173 RGVSYEKKKRKRPLPSSSTSSSSA 196

[Close]

BLAST of Spo06123.1 vs. TAIR (Arabidopsis)
Match: AT4G18610.1 (Protein of unknown function (DUF640))

HSP 1 Score: 224.2 bits (570), Expect = 6.800e-59
Identity = 109/170 (64.12%), Postives = 131/170 (77.06%), Query Frame = 1


		  
Query: 24  NHQQAVATPPAAPTLSRYESQKRRDWNTFGQYLRNMRPPVAVTHCTCHHVLEFLRYLDQF 83
           +H+Q +   P  P LSRYESQKRRDWNTF QYL++  PP+ ++     HVL FLRYLDQF
Sbjct: 22  HHKQPLPPQPQQP-LSRYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQF 81

Query: 84  GKTKVHLNGCTFFGQPDPPAPCSCPLRQAWGSLDALIGRLRAAYEEH-GGSPESNPFGNG 143
           GKTKVH   C FFGQPDPP PC+CPL+QAWGSLDALIGRLRAAYEEH GGSP++NPF NG
Sbjct: 82  GKTKVHHQACVFFGQPDPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANG 141

Query: 144 TIRVYLREVKDCQAKARGIPYKKKKKKRK------VLKSCDNGSSSNRRF 187
           +IRV+LREV++ QAKARGIPY+KKK+++       V K   N S+ N+ F
Sbjct: 142 SIRVHLREVRESQAKARGIPYRKKKRRKTKNEVVVVKKDVANSSTPNQSF 190

The following BLAST results are available for this feature:

BLAST of Spo06123.1 vs. NCBI nr
BLAST of Spo06123.1 vs. UniProtKB/TrEMBL
BLAST of Spo06123.1 vs. ExPASy Swiss-Prot
BLAST of Spo06123.1 vs. TAIR (Arabidopsis)

BLAST of Spo06123.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902197086\|gb\|KNA13305.1\|	7.7e-97	100.	hypothetical protein SOVF_1179...	[more]
gi\|870852497\|gb\|KMT04412.1\|	5.8e-84	80.7	hypothetical protein BVRB_8g18...	[more]
gi\|661898802\|emb\|CDO96796.1\|	3.6e-70	82.2	unnamed protein product [Coffe...	[more]
gi\|747077714\|ref\|XP_011085992.1\|	4.7e-70	87.2	PREDICTED: protein LIGHT-DEPEN...	[more]
gi\|802786856\|ref\|XP_012091774.1\|	1.8e-69	76.8	PREDICTED: protein LIGHT-DEPEN...	[more]

BLAST of Spo06123.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R1B2_SPIOL	5.4e-97	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BTE8_BETVU	4.0e-84	80.7	Uncharacterized protein OS=Bet...	[more]
A0A068TKT1_COFCA	2.5e-70	82.2	Uncharacterized protein OS=Cof...	[more]
A0A0D2S2A7_GOSRA	1.3e-69	84.5	Uncharacterized protein OS=Gos...	[more]
A0A067JBB2_JATCU	1.3e-69	76.8	Uncharacterized protein OS=Jat...	[more]

BLAST of Spo06123.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
LSH10_ARATH	3.2e-66	80.5	Protein LIGHT-DEPENDENT SHORT ...	[more]
G1L7_ORYSJ	3.4e-60	75.0	Protein G1-like7 OS=Oryza sati...	[more]
G1L7_ORYSI	3.4e-60	75.0	Protein G1-like7 OS=Oryza sati...	[more]
G1L2_ORYSJ	6.4e-59	70.2	Protein G1-like2 OS=Oryza sati...	[more]
G1L2_ORYSI	6.4e-59	70.2	Protein G1-like2 OS=Oryza sati...	[more]

BLAST of Spo06123.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G42610.1	1.8e-67	80.5	Protein of unknown function (D...	[more]
AT1G78815.1	3.6e-60	68.6	Protein of unknown function (D...	[more]
AT3G23290.2	3.6e-60	77.4	Protein of unknown function (D...	[more]
AT2G31160.1	2.3e-59	70.8	Protein of unknown function (D...	[more]
AT4G18610.1	6.8e-59	64.1	Protein of unknown function (D...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 35..153 score: 4.2
IPR006936	ALOG domain	PROFILE	PS51697	ALOG	coord: 40..167 score: 74
None	No IPR available	PANTHER	PTHR31165	FAMILY NOT NAMED	coord: 38..175 score: 2.2E
None	No IPR available	PANTHER	PTHR31165:SF8	SUBFAMILY NOT NAMED	coord: 38..175 score: 2.2E

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo06393	0.69	Barchart \| Table