Spo06135 (gene) | SpinachBase

Overview


Name	Spo06135
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Multidrug resistance protein ABC transporter family
Location	chr4 : 12329432 .. 12330791 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATCTAGCTTCGAGTTATTCGCCAATTCTCACTGTGACAACGTCAATTGCGGTGATCGTAGTGTTTGTGTTCATTTTATGGTAAATGTATGAACTGGAAAATCTCTCTCTCTCTCTCTCTCTCCTTTTCAGTTTCGGAAATTGTTTCGATCTTGATTATTTTTTCTACACTAGCGTTTTTGAATTTAAATTTGAGTTTTGTTTTCTGAATAAATCTTGTTCTTGTTTGTATTTGAGTGGATTAAAAATATGAACTTTGATTGTTATAATTATGGAATTGGTTGTGTTTGGAGTCTTTGGATGATGCTAGGAAAATGGGATAAAATGTGAAAGAATGTTGCTTGTAATTGATTATGACGGCACAATTTATACGATTTACATTTGAGTTTGTATCATTGAAGCAGTTGACAGAAACATCGAGTTCAACTTGCGCGTGCTTTGTATCAAAATTCAGACATATATCTCTTGTATGATCCATTTAGTGATGTGGATGCGCATACTGCAACCAATCTGTTCAATGTAAACTTAATGTTTTCTCTTTTTGGATTTAATTTCTCTTATGTAGTAGTAGTACCGTTCTCTAAAAGAAGTGTATCTTGAATTGTACTAGCAATATATGAAGGTAGCGGCTATGAGGGAAGACGATTTTTCTTGTGACCCATCAAGTTGACTTCCTTCCCAAATTCGACACAATTTTGGTCAGTCGTAATGTTAAAGAAATTATGGTTTGTAAATTGTAATTATCCTCAATAAAATTAGCAAGGTTATTTTTCTTCTTGCTCCATTATCTATAGACGGACAATTTGTCATACTTTTAAGAGTTATTCTTTGTGAACATGTTGCGTCTGAGAATAAGACTAAGAAAATATTTACTGCGTTTAAGAATGAGTCTTTATGAATATTTTTCCCTAGCTAGAACTAACTTCCATGGTGTTTCTTGCTCTTCCAGCTTGTATCCGAGGGAAAGATCGTAAGAGCTTCTTACCATGAGTTGCTTATGACAAGTGAAGCATTTCAAAACCTTGTCAATAAATATGATACTACTGCTTCTCAGAACTCCAAAGAAGTGTTACGTGATACAGCTAAGACAGTAACATCAAAGATACTTCAGGAGGACACCAAAGAGAATTTGAATGTTAGTGATCAATTGATTAAGCGAGAAGAAAGAGAAATGGGAGATGCTGGAATCCAGCCTCACCTACAATATCTTAAATATGGAAATGCTTTTCTATACTTTCCACTATCAAATTTCATGCAATGTGTGTTTTTTCTGGGGCAGTTTGCCCAAAGTTGCTTGTTCGCTGCTAACCTTCAAGAATCTAGCACCATCAGCGAACCCATCATTATTGTACTTTAA

mRNA sequence

ATGTTATCTAGCTTCGAGTTATTCGCCAATTCTCACTGTGACAACGTCAATTGCGGTGATCGTAGTGTTTGTGTTCATTTTATGGTAAATCTTGTATCCGAGGGAAAGATCGTAAGAGCTTCTTACCATGAGTTGCTTATGACAAGTGAAGCATTTCAAAACCTTGTCAATAAATATGATACTACTGCTTCTCAGAACTCCAAAGAAGTGTTACGTGATACAGCTAAGACAGTAACATCAAAGATACTTCAGGAGGACACCAAAGAGAATTTGAATGTTAGTGATCAATTGATTAAGCGAGAAGAAAGAGAAATGGGAGATGCTGGAATCCAGCCTCACCTACAATATCTTAAATATGGAAATGCTTTTCTATACTTTCCACTATCAAATTTCATGCAATGTGTGTTTTTTCTGGGGCAGTTTGCCCAAAGTTGCTTGTTCGCTGCTAACCTTCAAGAATCTAGCACCATCAGCGAACCCATCATTATTGTACTTTAA

Coding sequence (CDS)

ATGTTATCTAGCTTCGAGTTATTCGCCAATTCTCACTGTGACAACGTCAATTGCGGTGATCGTAGTGTTTGTGTTCATTTTATGGTAAATCTTGTATCCGAGGGAAAGATCGTAAGAGCTTCTTACCATGAGTTGCTTATGACAAGTGAAGCATTTCAAAACCTTGTCAATAAATATGATACTACTGCTTCTCAGAACTCCAAAGAAGTGTTACGTGATACAGCTAAGACAGTAACATCAAAGATACTTCAGGAGGACACCAAAGAGAATTTGAATGTTAGTGATCAATTGATTAAGCGAGAAGAAAGAGAAATGGGAGATGCTGGAATCCAGCCTCACCTACAATATCTTAAATATGGAAATGCTTTTCTATACTTTCCACTATCAAATTTCATGCAATGTGTGTTTTTTCTGGGGCAGTTTGCCCAAAGTTGCTTGTTCGCTGCTAACCTTCAAGAATCTAGCACCATCAGCGAACCCATCATTATTGTACTTTAA

Protein sequence

MLSSFELFANSHCDNVNCGDRSVCVHFMVNLVSEGKIVRASYHELLMTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDTKENLNVSDQLIKREEREMGDAGIQPHLQYLKYGNAFLYFPLSNFMQCVFFLGQFAQSCLFAANLQESSTISEPIIIVL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo06135.1	Spo06135.1	mRNA

Homology

[Close]

BLAST of Spo06135.1 vs. NCBI nr
Match: gi|902236541|gb|KNA24427.1| (hypothetical protein SOVF_015800 isoform A [Spinacia oleracea])

HSP 1 Score: 254.2 bits (648), Expect = 1.500e-64
Identity = 131/133 (98.50%), Postives = 131/133 (98.50%), Query Frame = 1


		  
Query: 1   MLSSFELFANSHCDNVNCGDRSVCVHFMVNLVSEGKIVRASYHELLMTSEAFQNLVNKYD 60
           MLSSFELFANSHCDNVNCGDRSVCVHFM  LVSEGKIVRASYHELLMTSEAFQNLVNKYD
Sbjct: 1   MLSSFELFANSHCDNVNCGDRSVCVHFM--LVSEGKIVRASYHELLMTSEAFQNLVNKYD 60

Query: 61  TTASQNSKEVLRDTAKTVTSKILQEDTKENLNVSDQLIKREEREMGDAGIQPHLQYLKYG 120
           TTASQNSKEVLRDTAKTVTSKILQEDTKENLNVSDQLIKREEREMGDAGIQPHLQYLKYG
Sbjct: 61  TTASQNSKEVLRDTAKTVTSKILQEDTKENLNVSDQLIKREEREMGDAGIQPHLQYLKYG 120

Query: 121 NAFLYFPLSNFMQ 134
           NAFLYFPLSNFMQ
Sbjct: 121 NAFLYFPLSNFMQ 131

[Close]

BLAST of Spo06135.1 vs. NCBI nr
Match: gi|902210047|gb|KNA16333.1| (hypothetical protein SOVF_090010 [Spinacia oleracea])

HSP 1 Score: 212.2 bits (539), Expect = 6.700e-52
Identity = 111/135 (82.22%), Postives = 124/135 (91.85%), Query Frame = 1


		  
Query: 31  LVSEGKIVRASYHELLMTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDTKEN 90
           LVSEGKIVR SY+ELLMTSEAF+NLVNKYD+ ASQN+KEVLRDTA T TSKI QEDTKEN
Sbjct: 798 LVSEGKIVRGSYNELLMTSEAFRNLVNKYDSAASQNTKEVLRDTALTGTSKIFQEDTKEN 857

Query: 91  LNVSDQLIKREEREMGDAGIQPHLQYLKYGNAFLYFPLSNFMQCVFFLGQFAQSCLFAAN 150
           LN SDQLIKREERE+GDAGI+P+LQYLK+GNA LYF LSNFMQC+F LGQFAQS L AAN
Sbjct: 858 LNASDQLIKREERELGDAGIKPYLQYLKHGNALLYFSLSNFMQCLFLLGQFAQSVLLAAN 917

Query: 151 LQESSTISEPIIIVL 166
           L+ESSTIS+P+I+VL
Sbjct: 918 LRESSTISKPLILVL 932

[Close]

BLAST of Spo06135.1 vs. NCBI nr
Match: gi|870860691|gb|KMT11999.1| (hypothetical protein BVRB_5g099610 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 170.2 bits (430), Expect = 2.900e-39
Identity = 88/138 (63.77%), Postives = 112/138 (81.16%), Query Frame = 1


		  
Query: 28  MVNLVSEGKIVRASYHELLMTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDT 87
           + NL+SEGKI+RASY+ELL+TSE F++LV   D  ASQNS+EVL + A T   +I +ED 
Sbjct: 765 LFNLISEGKIIRASYNELLVTSETFRSLVKHDDIIASQNSREVLLNEAST---EIPREDR 824

Query: 88  KENLNVSDQLIKREEREMGDAGIQPHLQYLKYGNAFLYFPLSNFMQCVFFLGQFAQSCLF 147
            E+LN +DQL+K+EERE+GDAGI+PHLQYLK+G A LYF LSNFM C+F LGQFAQSCL 
Sbjct: 825 NEHLNANDQLVKQEEREIGDAGIKPHLQYLKHGKALLYFSLSNFMHCLFILGQFAQSCLL 884

Query: 148 AANLQESSTISEPIIIVL 166
           A NL+ESS++S PI+I +
Sbjct: 885 ATNLRESSSVSRPIVIAV 899

[Close]

BLAST of Spo06135.1 vs. NCBI nr
Match: gi|902236542|gb|KNA24428.1| (hypothetical protein SOVF_015800 isoform B [Spinacia oleracea])

HSP 1 Score: 168.7 bits (426), Expect = 8.500e-39
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1


		  
Query: 47  MTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDTKENLNVSDQLIKREEREMG 106
           MTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDTKENLNVSDQLIKREEREMG
Sbjct: 1   MTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDTKENLNVSDQLIKREEREMG 60

Query: 107 DAGIQPHLQYLKYGNAFLYFPLSNFMQ 134
           DAGIQPHLQYLKYGNAFLYFPLSNFMQ
Sbjct: 61  DAGIQPHLQYLKYGNAFLYFPLSNFMQ 87

[Close]

BLAST of Spo06135.1 vs. NCBI nr
Match: gi|731332008|ref|XP_010676960.1| (PREDICTED: ABC transporter C family member 10-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 167.9 bits (424), Expect = 1.500e-38
Identity = 87/137 (63.50%), Postives = 111/137 (81.02%), Query Frame = 1


		  
Query: 29  VNLVSEGKIVRASYHELLMTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDTK 88
           + L+SEGKI+RASY+ELL+TSE F++LV   D  ASQNS+EVL + A T   +I +ED  
Sbjct: 795 IMLISEGKIIRASYNELLVTSETFRSLVKHDDIIASQNSREVLLNEAST---EIPREDRN 854

Query: 89  ENLNVSDQLIKREEREMGDAGIQPHLQYLKYGNAFLYFPLSNFMQCVFFLGQFAQSCLFA 148
           E+LN +DQL+K+EERE+GDAGI+PHLQYLK+G A LYF LSNFM C+F LGQFAQSCL A
Sbjct: 855 EHLNANDQLVKQEEREIGDAGIKPHLQYLKHGKALLYFSLSNFMHCLFILGQFAQSCLLA 914

Query: 149 ANLQESSTISEPIIIVL 166
            NL+ESS++S PI+I +
Sbjct: 915 TNLRESSSVSRPIVIAV 928

[Close]

BLAST of Spo06135.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZX3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_015800 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.100e-64
Identity = 131/133 (98.50%), Postives = 131/133 (98.50%), Query Frame = 1


		  
Query: 1   MLSSFELFANSHCDNVNCGDRSVCVHFMVNLVSEGKIVRASYHELLMTSEAFQNLVNKYD 60
           MLSSFELFANSHCDNVNCGDRSVCVHFM  LVSEGKIVRASYHELLMTSEAFQNLVNKYD
Sbjct: 1   MLSSFELFANSHCDNVNCGDRSVCVHFM--LVSEGKIVRASYHELLMTSEAFQNLVNKYD 60

Query: 61  TTASQNSKEVLRDTAKTVTSKILQEDTKENLNVSDQLIKREEREMGDAGIQPHLQYLKYG 120
           TTASQNSKEVLRDTAKTVTSKILQEDTKENLNVSDQLIKREEREMGDAGIQPHLQYLKYG
Sbjct: 61  TTASQNSKEVLRDTAKTVTSKILQEDTKENLNVSDQLIKREEREMGDAGIQPHLQYLKYG 120

Query: 121 NAFLYFPLSNFMQ 134
           NAFLYFPLSNFMQ
Sbjct: 121 NAFLYFPLSNFMQ 131

[Close]

BLAST of Spo06135.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9Z2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_090010 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.700e-52
Identity = 111/135 (82.22%), Postives = 124/135 (91.85%), Query Frame = 1


		  
Query: 31  LVSEGKIVRASYHELLMTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDTKEN 90
           LVSEGKIVR SY+ELLMTSEAF+NLVNKYD+ ASQN+KEVLRDTA T TSKI QEDTKEN
Sbjct: 798 LVSEGKIVRGSYNELLMTSEAFRNLVNKYDSAASQNTKEVLRDTALTGTSKIFQEDTKEN 857

Query: 91  LNVSDQLIKREEREMGDAGIQPHLQYLKYGNAFLYFPLSNFMQCVFFLGQFAQSCLFAAN 150
           LN SDQLIKREERE+GDAGI+P+LQYLK+GNA LYF LSNFMQC+F LGQFAQS L AAN
Sbjct: 858 LNASDQLIKREERELGDAGIKPYLQYLKHGNALLYFSLSNFMQCLFLLGQFAQSVLLAAN 917

Query: 151 LQESSTISEPIIIVL 166
           L+ESSTIS+P+I+VL
Sbjct: 918 LRESSTISKPLILVL 932

[Close]

BLAST of Spo06135.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CIV3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g099610 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.000e-39
Identity = 88/138 (63.77%), Postives = 112/138 (81.16%), Query Frame = 1


		  
Query: 28  MVNLVSEGKIVRASYHELLMTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDT 87
           + NL+SEGKI+RASY+ELL+TSE F++LV   D  ASQNS+EVL + A T   +I +ED 
Sbjct: 765 LFNLISEGKIIRASYNELLVTSETFRSLVKHDDIIASQNSREVLLNEAST---EIPREDR 824

Query: 88  KENLNVSDQLIKREEREMGDAGIQPHLQYLKYGNAFLYFPLSNFMQCVFFLGQFAQSCLF 147
            E+LN +DQL+K+EERE+GDAGI+PHLQYLK+G A LYF LSNFM C+F LGQFAQSCL 
Sbjct: 825 NEHLNANDQLVKQEEREIGDAGIKPHLQYLKHGKALLYFSLSNFMHCLFILGQFAQSCLL 884

Query: 148 AANLQESSTISEPIIIVL 166
           A NL+ESS++S PI+I +
Sbjct: 885 ATNLRESSSVSRPIVIAV 899

[Close]

BLAST of Spo06135.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RY92_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_015800 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.900e-39
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1


		  
Query: 47  MTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDTKENLNVSDQLIKREEREMG 106
           MTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDTKENLNVSDQLIKREEREMG
Sbjct: 1   MTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDTKENLNVSDQLIKREEREMG 60

Query: 107 DAGIQPHLQYLKYGNAFLYFPLSNFMQ 134
           DAGIQPHLQYLKYGNAFLYFPLSNFMQ
Sbjct: 61  DAGIQPHLQYLKYGNAFLYFPLSNFMQ 87

[Close]

BLAST of Spo06135.1 vs. UniProtKB/TrEMBL
Match: M5X0E5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000192mg PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.200e-16
Identity = 51/130 (39.23%), Postives = 83/130 (63.85%), Query Frame = 1


		  
Query: 31  LVSEGKIVRAS-YHELLMTSEAFQNLVNKYDTTAS--QNSKEVLRDTAKTVTSKILQEDT 90
           ++S GKI+RA+ Y ELL +S+ FQ+LVN ++ TA   +  +   +  + T   + ++ + 
Sbjct: 826 MMSSGKILRAAPYKELLASSQEFQDLVNAHNDTAGCGKQKEPTRKQNSSTQEIEKVKTEV 885

Query: 91  KENLNVSDQLIKREEREMGDAGIQPHLQYLKYGNAFLYFPLSNFMQCVFFLGQFAQSCLF 150
           ++  +  DQLIK+EERE GD G++P++QYLK+   FLYF L++F   +F +GQ  QS   
Sbjct: 886 QQTESSGDQLIKQEERETGDTGLKPYIQYLKHSTGFLYFSLTSFFHLIFIVGQLVQSYWL 945

Query: 151 AANLQESSTI 158
           A+ LQ  S +
Sbjct: 946 ASKLQVLSRV 955

[Close]

BLAST of Spo06135.1 vs. ExPASy Swiss-Prot
Match: AB10C_ARATH (ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 2.000e-11
Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = 1


		  
Query: 29  VNLVSEGKIVRA-SYHELLMTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDT 88
           V L+S+G+I  A +Y ELL  S  FQ+LVN +  TA       + +  K V        +
Sbjct: 795 VLLMSDGEITEADTYQELLARSRDFQDLVNAHRETAGSERVVAVENPTKPVKEINRVISS 854

Query: 89  KENLNVSDQLIKREEREMGDAGIQPHLQYLKYGNAFLYFPLSNFMQCVFFLGQFAQSCLF 148
           +  +    +LIK+EERE GD G++P++QY+     +++F +++  Q  F +GQ  Q+   
Sbjct: 855 QSKVLKPSRLIKQEEREKGDTGLRPYIQYMNQNKGYIFFFIASLAQVTFAVGQILQNSWM 914

Query: 149 AANLQESSTISEPIIIV 165
           AAN+      +  +I+V
Sbjct: 915 AANVDNPQVSTLKLILV 931

[Close]

BLAST of Spo06135.1 vs. TAIR (Arabidopsis)
Match: AT3G59140.1 (multidrug resistance-associated protein 14)

HSP 1 Score: 70.5 bits (171), Expect = 1.100e-12
Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = 1


		  
Query: 29  VNLVSEGKIVRA-SYHELLMTSEAFQNLVNKYDTTASQNSKEVLRDTAKTVTSKILQEDT 88
           V L+S+G+I  A +Y ELL  S  FQ+LVN +  TA       + +  K V        +
Sbjct: 795 VLLMSDGEITEADTYQELLARSRDFQDLVNAHRETAGSERVVAVENPTKPVKEINRVISS 854

Query: 89  KENLNVSDQLIKREEREMGDAGIQPHLQYLKYGNAFLYFPLSNFMQCVFFLGQFAQSCLF 148
           +  +    +LIK+EERE GD G++P++QY+     +++F +++  Q  F +GQ  Q+   
Sbjct: 855 QSKVLKPSRLIKQEEREKGDTGLRPYIQYMNQNKGYIFFFIASLAQVTFAVGQILQNSWM 914

Query: 149 AANLQESSTISEPIIIV 165
           AAN+      +  +I+V
Sbjct: 915 AANVDNPQVSTLKLILV 931

The following BLAST results are available for this feature:

BLAST of Spo06135.1 vs. NCBI nr
BLAST of Spo06135.1 vs. UniProtKB/TrEMBL
BLAST of Spo06135.1 vs. ExPASy Swiss-Prot
BLAST of Spo06135.1 vs. TAIR (Arabidopsis)

BLAST of Spo06135.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902236541\|gb\|KNA24427.1\|	1.5e-64	98.5	hypothetical protein SOVF_0158...	[more]
gi\|902210047\|gb\|KNA16333.1\|	6.7e-52	82.2	hypothetical protein SOVF_0900...	[more]
gi\|870860691\|gb\|KMT11999.1\|	2.9e-39	63.7	hypothetical protein BVRB_5g09...	[more]
gi\|902236542\|gb\|KNA24428.1\|	8.5e-39	100.	hypothetical protein SOVF_0158...	[more]
gi\|731332008\|ref\|XP_010676960.1\|	1.5e-38	63.5	PREDICTED: ABC transporter C f...	[more]

BLAST of Spo06135.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RZX3_SPIOL	1.1e-64	98.5	Uncharacterized protein OS=Spi...	[more]
A0A0K9R9Z2_SPIOL	4.7e-52	82.2	Uncharacterized protein OS=Spi...	[more]
A0A0J8CIV3_BETVU	2.0e-39	63.7	Uncharacterized protein OS=Bet...	[more]
A0A0K9RY92_SPIOL	5.9e-39	100.	Uncharacterized protein OS=Spi...	[more]
M5X0E5_PRUPE	9.2e-16	39.2	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo06135.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
AB10C_ARATH	2.0e-11	32.1	ABC transporter C family membe...	[more]

BLAST of Spo06135.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G59140.1	1.1e-12	32.1	multidrug resistance-associate...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24223	FAMILY NOT NAMED	coord: 28..164 score: 7.7
None	No IPR available	PANTHER	PTHR24223:SF192	ABC TRANSPORTER C FAMILY MEMBER 10	coord: 28..164 score: 7.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo25050	0.65	Barchart \| Table