Spo06142 (gene)

Overview
NameSpo06142
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionDNA damage-binding protein 1 (UV-damaged DNA-binding protein 1)
LocationSuper_scaffold_65 : 82064 .. 89193 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAACTTCAACCGACATTTTCCTTCTGAGTTGATCCATTCTCAGATCTCAGCCCTAATTATCAAATCTCCAAAACTCATTTACACCTTCGCAAATCTCACCGTCGATTATTATTTCCTCTTTATCTTTGATCTACTCCATCGCAAATCCAATCTCTGAAACCCTAACCAGCATTCATCTCTCTTTGTAAATTTCATTGTGAATCTCCCTTTCAATCTTCCTCCAAAGATCTCGTAATCTTTCGATTTTACATCAAGATTTCAATAGCTGTCTACAGAGAGATGAAAAGAGGGAGGAAGAGAGAGAAAGAATTCGACCTTCTGCGGCTCGATGTTCAACCTTCGTTGTTGGCTTTGCGGTATGGATTCGAGCCTTAATCTCTATTTGTTCTTGGAAGTTTGTTTGGTTTATGATGTTTGGGTGATTTGATTGATTTTAGGGTTGATTGTTCTTCGTTTGATTTGATGTAATTTTGGGTGGTTTTATTGACTGGAAGACCGATTCGGGTCATTTTTTGGTTAATTTTGTTTTTTGTTTTTGTTTTTTTCATGTTATTTAGGTCGATTTTGTTAATTTTTCTGGCCAAATTGGTTTGAGTTTTTGGAATTTACTCGATTTCATTTGTTTTTGGAATTTTTTTGGCCAAATTGGTTTGAGTTTTTGGAATTTACTCGGATTCCTGGACCTGCCTAAGGGAGATGATCAGACCACTGATCATGAAGCGGATGAGAATGAAGCTGATTCATGGTTGCTACTTTAACCCAGGTAAGAACAGAAACAACCTAAATACAAATGGGTTTTTAACGAGAGGAGGAGAGGTTCATGAGTACCTGGACCTATTTGAATATAATTCAAGTGCAGGTAATCAGTTCTGCGAGCCGTCGTATAACCAGCAGCAGGAATTCAGTGTCCCTGAGAAGAACTTTGGAGATGACAGTGTCGTACCAGTTAAGTCTAGGGAACCAAAAGATCACCAAATACAGTACCAGAACTCTTCAGTTATTCAAAGGGGGCACTGGTATGGGAACTGGCCGGGATAAATTGGAAGAAAGGGCCGGTATTTTATCATCTTAGCATTGGAGGAAGACGGATTAGGTGAAGTTGTTCCTTCTCCTTCTGGCTCAAGGTATGATTCTGCCCGTCTTAAATTTTGAATCCCGTGCAGCTGAGAAGTAATTTTTGCCTTAATTATAGAATTGGGTTGTTTCATTATCTGAATAAAGAATCACAGAGTACTTGTAATATTTGTTTTTAATTTTCTTTTTTCAGTCAGTTGTAATTGAGGATTGTATACAATTGATTAAAAGGGTGGACATAACATAATAAGGTTGCTTTATAGAAGTTAGGGGCATTGGATTATCTAAATTAATTGTTGTCTTCAATCTNCTTTATAGAAGTTAGGGGCATTGGATTATCTAAATTAATTGTTGTCTTCAATCTAATTGCAATAGTGGTAGGTCGATGTCAAAAGTACTCTTACTATCCAACTTTAAGCTCTTGTGAATTTTTGTTCTGTAGGGAAAATGAGGTTTTTTTGTCTTTGATTACGTGCCCATGGAAGCTTATTTGCGTGGCGGAACTTTTTACAACTACATTCTCTAACTGTATATATATATTTAATTTCCTGCATTTTTCAAGTTGTTTCAGTCTTTGTCTTCATGTTTAAGGGTATTTTAATAGAAATTATTTAAGTTATTGTCGTGCTTAATGTGGAATATTAAGGATTCACTATGCCCACATTCTAAGTAGATTTTCTGAATCTTTAGCAAAAAATACTCAATATGGTAATGCATTCTGAAAAAATCTTCGAAGCTTACTATGCAGTTTACTATTGATCACCTATCTTCTCTGTTCTTGTCTCAAAATTAAAAACAATGGTTTTAGATCACCTATCTAGTTTACTATTGATGGTGGATGTTTAAGAGTTATTTGTCAGTATATAGCTATGAATCATGAGCTGTGCTTACCCTTTTCAGTCAACAGCTGTCTTTAGTGTCAACTACATAGATGTGAACACCAAGTGCATTATCTTAGTTACTGACCCTCTGAAAAGAAAGCTAGCCAGCTCCTTCAAATGCTTAGTGTTTTTATCTAGTCAATGAAAATTGAACTTCTCTTGTCTTTTATTTCGTTTGTTTAATTCTTTTGTTTATTAACTTACATGGTCTTTCTTTTTTAAACTTTGCGTGCCTTCTTTCTTATCTTCTTCACCAGGAGAACAAACCATGCTTCGTAAAATAACAGATTTTTTTGTTCCTGCAGTTAAATCAATTGAAACAGAAAGATACTTAACATAGTATACAATTGATTTTCTTTTTAAGCATTGTTAATTCTTTGTACATTTAGAATAACTTCATGACACTGACGAATGAGGTGTTGGTGGTGATTTTCGTTGTTGATGCTCATTGCATTCCTTGTTGCTTCTATATTCATGTATGCCACTCTTTTTTGCAATATGCTAGTTTCCAAATGTGAAACATGATGTTTTCCTTGAAGCTGTAGACATTTAATGCATTATTGCTCTCTTTTATTCTTGTGCATGTTAATGGAGCTAACCATCTAAAGTTCTGTAATATAAACTTTGGTGCTTTTGTGCTAATAATCCTCTATTTTCTCTGTCAACAGCCTTGCGATCGCAAAAGAAGGTGAACTCACAATAGGCACCATTGATGATATTCAGAAGCTTCATATTCGATCTATTCCTCTGGGAGAACATGCTCGGCGTATCTGCCACCAGGAACAAACTCGCACTTTTTCCATTTGTAGTTTGAAGTACAACCAAGCTAGTGCAGAGGAATCTGAAATGCATTTTGTACGCTTGTTGGATGACCAAACCTTTGAGATCATATCTACTTATGCACTTAATACTTATGAATGTGGTTGCTCCATACTGAGTTGCTCATTCTTAGATGACATCAAAGTTTACTACTGTGTTGGAACAACATATGTTTTACCTGAGGAAAATGAGCCAACCAAGGTAGAGTTTTAGATTTTCATGGAGTTCATATTTCATGCATCTGTCTTCTGATGATATCTGTCAAAAAAAGGGAAACAGTATAAAAACATTCAGTGGTATGGTAGTGAAACTATCTTGGCATGTTGTAGTGGAAGAAAGGCTTTTCTGGTGGCGAATACAACTTATTTAAACTGCTCTGTTAGAGTTATTTCCGATGTTCCAATTTTCTACTTAGTATAATGGCTTGAAAGGAATGAAGGGTTTCGAATCGGAATTCATGAAATGTCGAACCCCTTCCATCTATGCACAGCATTATGGAGTTTCCTTGTGAAAATTGAATTACTTAAATGATTATAAACATTTTGCAATCCAGATTTTTTTTTGTCACTTTTCTCTGATAAGGATATCTAATCTATCATATTATCATGTAAATGTTGTAGGGAAGAATTCTGGTTTTTGTTGTTGAAGACGGAAAGCTGCAACTCATTGCTGAGAAAGAAACTAAAGGTGCAGTGTACTCACTTAATGCCTTCAACGACAAGCTTCTTGCTGCCATCAATCAGAAAATTCAGCTTTATAAGTGGATGCTTCGGGATGATGGAACTCACGAGTTACAGTCTGAATGTGGACACCATGGGCACATTCTTGCCAGTTGTATGTCCAGACTCGTGGTGATTTCATTGTTGTTGGGGATCTGATGAAATCAATTTCTCTACTAATATACAAGGCACGGAATTCAGTAAAAGTATCTAGACTGCATCTTTTCTCTGTCTGTATGTGTTGTTGCTTGTAATCCAGTCAAGCACTATTTTTCTGTTTTGTGCTAACCTGAATCATTCAGAAAGATTGAATTCTGGAGTTTTGGTAGTCGAACCGTATGTTGGTGTTGCTTGTTTGGGAGCTATTTTGTTTGGATATCACCTTGTGAAGTGGGTTGAACAAGGTCTTTACCTTGTATAGTTGTGCACAATGGAGGCTTATGTGCATGCTCTCACTTTATGTAATTCTGTCTATATGTCAATTAATAAAACTGCTAATTAGCTGTTATGGACCAGAGCTGAAATTTTGCAGTTCTGCAATGCTGACATAATTATTAGCAATGCGAATTAAATCAGGCTTTGATGTACAAGAGCTATCTGAAGATGCTCCAGATGATCAGGAGGGACTGGATGCTACAGTAACGCATGTGGTAAATTTGCTGTCTACTGAGCCCACTGACAGTTAGTTCCTCTCTCCTTATTTGTATATTCGCTAGCTGCTTGTCTGTATCATTTAGATTGTCAAAGGATGACTATTATTATTAGGTTTCATAATCATAGGCAATTTGGGAGCTTGTACTTCTAAAAGAAGTTTAAGTGTACGAATGAAACTTTTTCTCACTTTACCACAGTTCTCTAGGCATCCAAGACCCATCTGTGTGACTGGAGATCTTATTAATCAACCTGGCGAATCGACGGGAATATTGCTACTGCTGAATTCTTGCTGAGATTAATCGATACAAAGTTTAATCATCTTTTAGGGGTGTTTAGTGGTGGCAGATTAACATGCTAGCTGTTTGGACTTGTATAGACCATCCTCGCATGCAATATTCTGGATTAGAAGTTGAGAAACATGCCTCTCTAGTCTCTTAGTTAGGTTGATTGACCTGAATGGCGGTGGGTCAAATGTTGTCCGGGAAAACAAATGACATTTTGATACAATCGCCATCTCTTGGTATAGATATAGATTCCTTTTATTTGCAGGGTTTGAGAAGGTACATCTGTATTACTTATTTATGTATTTATGGATATTATTTATGGATGTTAGACCATAATTATGGAGGCTAGTACCGAGTAGTAGTACCAATGTATTACTGCAGGAATTTATTTATTTTGTAAAATAAACGCACTATTTGCAGCGCGTGCTGGTAGACCAAAGTTGCAAATAGACGTTAATTGCAGCGCGTGCTGGTAGACCAAAGTTGTAAATAGACGCTAATTGCAGCGCGTGCTGGTAGACCAAAGTTGTCAATAGACGCTAATTACAGCGCGCGTGAATGCGCTGCAATTAATTGGTTTTTGCAGCGCTTTTGTTCGCTGCGAATAAAAGTCCACTATTTGCAACCATCACAATTGCAGCGCTCAAAAACGCTGCAAAAAGCCCCTTTTACGCGTGCTGCAAATGACATTTTTTCTACTAGTGATGTCATCGATCCCATGATTTTCCTTGTGAATTTATGTGTTTTTCGATTTGCGTGTCATCGACCCCATGTGAAATTATGATTTTTTCGATTTGCATGTCATTGATCCCATGATTTTCCTGTGTAATAGTTTGAATTTGTGGATTTGTTTGAATTTATGAATTTGTTTGCATTTCATTGATCCCATGAATTTGTGAATTAGTTGAAATTTATGAGTTTTGGAAGAAGAGGATCCCATGAATTTGTTGGAATGCATGTCTGATTTTGTTCAGTTTATCTGGTTTTGATGATCTTGTTCAGTTGCATGTTCAATCCCATGAATGTTTGTCTGATTTTTTTCAGTTGATCTTGTATGTTGATCTAGTTATGATAATCTTGTTCAGTTGCATGTTCAATCCCATGAATTGTTTGTCTGATTTTGTTCAATTGATCTTGTCAGTTGATCTTGTTATGATGATCTCGTTCGGTTGCATGTTCAATCCCATGAATGTTTTGAAGATGTTGTTCAGTTGATCTTGTTTTGATGATCTTGTTCAGTTGCATGTTCAATCCCATGAATGTTTTGATGATGTTGTTCAGTTGATCTTGTTTTGATGATCTTGTTCAGTTGCATGTTCAATCCCATGAATGTTTTGATGATGTTGTTCAGTTGATCTTGTTCAATTGATCTTGTTCAGTTGCATGTTCAATCCCATGAATGTTTTGATGATGTTGTTCAGTTGATCTTGTTCAATTGATCTTGTTCAGTTGCATGTTCAATCCCATGAATGTTTTGATGATGTTGTTCAGTTGATCTTGTTCAATTGATCTTGTTCAGTTGCATGTTCAATCCCATGATTGTTATGATGATGTTGTTCAGNTTGTTCAATTGATCTTGTTCAGTTGCATGTTCAATCCCATGATTGTTATGATGATGTTGTTCAGTTGATCTTGTTCAGTTGTTCAATTGATCTTGTTTTGATGATCTTGTTCAGTTGCATGTTCAATCCCATGCATGTTCCGTTGCCTTACATGTGAATAAATACATATGAATGTGTCTTAGATAGTTAAAACTAAGCTTATAAAACATGTAGTAAGTTTAAAATCATCCATTAGGTACTTTTGTTAAAAAATGGGAACGAAAATGCCTTAGTTTAGCCTATATATGACCTATAACGACCTAATGAGGCTTAAATGTGCATAAATAGATTAGAATGAGTCTTAAAAACCTTGAATGTGCCAAATAAAACATGTAAATTAAACCGTTTAAAATGATAAGTTAGGTTCTTTAGATCAAAGTTGGGCGAAAAAATGTAATTTTAGGCAAAATATGACCTATAACGACCAAATAAGACTTACATGTGAATAAATAGATTTTAACGTGTCTTAGAAAGTTAACACTAGGCTTATAAAACATGTAATAAGTTTAAAATTAGCCATTAGGTCCTATAATTCAAAAACGGGAGCGAAAATGCCTTAGTTTAGCCTAAATATGACCTATATCGACCAAATAAGACTTAAATGTGCATAAATATATTAGAATGAGTCTTAGAAACCTTGAATGTGCCACATAAAACATGTAAACCGTTTAAAATGATAACTTAGGTTCCTTAGCTCAATGTTGGGCGAGAAATGCCATTTTAGGCAAAATATGACCCATAACGACCAAATAAGCCTTAAATGTGAATAAATACATTTGCATGTGTCTTAGAAAGTTAAAAATAAGCTTATAAAACATGTATTAAGTTTAAAATCAGCCACTAGGTCCTATAATTCAAAAATGGGAGCGAAAATGCCTTAGAAACCTAAGAGTTCAATTTATTTGTCCCTTAACAAAAGTTCCTTATTTGTTATGCAAGTTGGTTTAATATATTTGTTATGCATGGGTGATATTATTTCAATTCTTGTAGGAAACCTACGAAAAAAATGTTGTTGAATGCCGTGAAAAAGGTATTGATAAAGATCCCAATCAAATTTACTTTGAGACAGTAGGTGGGAGAAAGAAGGGAAAGGTAG

mRNA sequence

TATAACTTCAACCGACATTTTCCTTCTGAGTTGATCCATTCTCAGATCTCAGCCCTAATTATCAAATCTCCAAAACTCATTTACACCTTCGCAAATCTCACCGTCGATTATTATTTCCTCTTTATCTTTGATCTACTCCATCGCAAATCCAATCTCTGAAACCCTAACCAGCATTCATCTCTCTTTGTAAATTTCATTGTGAATCTCCCTTTCAATCTTCCTCCAAAGATCTCGTAATCTTTCGATTTTACATCAAGATTTCAATAGCTGTCTACAGAGAGATGAAAAGAGGGAGGAAGAGAGAGAAAGAATTCGACCTTCTGCGGCTCGATGTTCAACCTTCGTTGTTGGCTTTGCGGTCGATTTTGTTAATTTTTCTGGCCAAATTGGTTTGAGTTTTTGGAATTTACTCGATTTCATTTGTTTTTGGAATTTTTTTGGCCAAATTGGTTTGAGTTTTTGGAATTTACTCGGATTCCTGGACCTGCCTAAGGGAGATGATCAGACCACTGATCATGAAGCGGATGAGAATGAAGCTGATTCATGGTTGCTACTTTAACCCAGGTAATCAGTTCTGCGAGCCGTCGTATAACCAGCAGCAGGAATTCAGTGTCCCTGAGAAGAACTTTGGAGATGACAGTGTCGTACCAGTTAAGTCTAGGGAACCAAAAGATCACCAAATACAGTACCAGAACTCTTCAGTTATTCAAAGGGGGCACTGTCAGTTCCTTGCGATCGCAAAAGAAGGTGAACTCACAATAGGCACCATTGATGATATTCAGAAGCTTCATATTCGATCTATTCCTCTGGGAGAACATGCTCGGCGTATCTGCCACCAGGAACAAACTCGCACTTTTTCCATTTGTAGTTTGAAGTACAACCAAGCTAGTGCAGAGGAATCTGAAATGCATTTTGTACGCTTGTTGGATGACCAAACCTTTGAGATCATATCTACTTATGCACTTAATACTTATGAATGTGGTTGCTCCATACTGAGTTGCTCATTCTTAGATGACATCAAAGTTTACTACTGTGTTGGAACAACATATGTTTTACCTGAGGAAAATGAGCCAACCAAGGGAAGAATTCTGGTTTTTGTTGTTGAAGACGGAAAGCTGCAACTCATTGCTGAGAAAGAAACTAAAGGTGCAGTGTACTCACTTAATGCCTTCAACGACAAGCTTCTTGCTGCCATCAATCAGAAAATTCAGCTTTATAAGTGGATGCTTCGGGATGATGGAACTCACGAGTTACAGTCTGAATGTGGACACCATGGGCACATTCTTGCCAGTTGCTTTGATGTACAAGAGCTATCTGAAGATGCTCCAGATGATCAGGAGGGACTGGATGCTACAGTAACGCATGTGGTGGGAGAAAGAAGGGAAAGGTAG

Coding sequence (CDS)

ATGATCAGACCACTGATCATGAAGCGGATGAGAATGAAGCTGATTCATGGTTGCTACTTTAACCCAGGTAATCAGTTCTGCGAGCCGTCGTATAACCAGCAGCAGGAATTCAGTGTCCCTGAGAAGAACTTTGGAGATGACAGTGTCGTACCAGTTAAGTCTAGGGAACCAAAAGATCACCAAATACAGTACCAGAACTCTTCAGTTATTCAAAGGGGGCACTGTCAGTTCCTTGCGATCGCAAAAGAAGGTGAACTCACAATAGGCACCATTGATGATATTCAGAAGCTTCATATTCGATCTATTCCTCTGGGAGAACATGCTCGGCGTATCTGCCACCAGGAACAAACTCGCACTTTTTCCATTTGTAGTTTGAAGTACAACCAAGCTAGTGCAGAGGAATCTGAAATGCATTTTGTACGCTTGTTGGATGACCAAACCTTTGAGATCATATCTACTTATGCACTTAATACTTATGAATGTGGTTGCTCCATACTGAGTTGCTCATTCTTAGATGACATCAAAGTTTACTACTGTGTTGGAACAACATATGTTTTACCTGAGGAAAATGAGCCAACCAAGGGAAGAATTCTGGTTTTTGTTGTTGAAGACGGAAAGCTGCAACTCATTGCTGAGAAAGAAACTAAAGGTGCAGTGTACTCACTTAATGCCTTCAACGACAAGCTTCTTGCTGCCATCAATCAGAAAATTCAGCTTTATAAGTGGATGCTTCGGGATGATGGAACTCACGAGTTACAGTCTGAATGTGGACACCATGGGCACATTCTTGCCAGTTGCTTTGATGTACAAGAGCTATCTGAAGATGCTCCAGATGATCAGGAGGGACTGGATGCTACAGTAACGCATGTGGTGGGAGAAAGAAGGGAAAGGTAG

Protein sequence

MIRPLIMKRMRMKLIHGCYFNPGNQFCEPSYNQQQEFSVPEKNFGDDSVVPVKSREPKDHQIQYQNSSVIQRGHCQFLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFLDDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLAAINQKIQLYKWMLRDDGTHELQSECGHHGHILASCFDVQELSEDAPDDQEGLDATVTHVVGERRER
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06142.1Spo06142.1mRNA


Homology
[Close]
BLAST of Spo06142.1 vs. NCBI nr
Match: gi|731351428|ref|XP_010687033.1| (PREDICTED: DNA damage-binding protein 1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 362.1 bits (928), Expect = 9.500e-97
Identity = 180/213 (84.51%), Postives = 190/213 (89.20%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H C F        LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI
Sbjct: 659 KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 718

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
           CHQEQTRTF+ICSLKYNQASAEESEMHFVRLLD Q+FEIISTY L+TYECGCSILSCSF 
Sbjct: 719 CHQEQTRTFAICSLKYNQASAEESEMHFVRLLDGQSFEIISTYPLDTYECGCSILSCSFS 778

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           DD  VYYCVGT YVLPEENEPTKGRILVF+VEDGKLQLIAEKETKGAVYSLNAFN KLLA
Sbjct: 779 DDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 838

Query: 241 AINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
           AINQKIQLYKWMLRDDG+HELQSECGHHGHILA
Sbjct: 839 AINQKIQLYKWMLRDDGSHELQSECGHHGHILA 871
[Close]
BLAST of Spo06142.1 vs. NCBI nr
Match: gi|720098797|ref|XP_010247742.1| (PREDICTED: DNA damage-binding protein 1 [Nelumbo nucifera])

HSP 1 Score: 354.4 bits (908), Expect = 2.000e-94
Identity = 176/213 (82.63%), Postives = 188/213 (88.26%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ + GH C F        LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI
Sbjct: 659 KLLYSNVNLREVGHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 718

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
           CHQEQTRTF+ICSLKYNQ+S EE+EMHFVRLLDDQTFE ISTYAL+T+E GCSI+SCSF 
Sbjct: 719 CHQEQTRTFAICSLKYNQSSTEETEMHFVRLLDDQTFEFISTYALDTFEYGCSIISCSFS 778

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           DD  VYYCVGT YVLPEENEPTKGRILVFVVEDGKLQLI EKETKGAVYSLNAFN KLLA
Sbjct: 779 DDSNVYYCVGTAYVLPEENEPTKGRILVFVVEDGKLQLIVEKETKGAVYSLNAFNGKLLA 838

Query: 241 AINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
           AINQKIQLYKWMLRDDG+ ELQSECGHHGHILA
Sbjct: 839 AINQKIQLYKWMLRDDGSRELQSECGHHGHILA 871
[Close]
BLAST of Spo06142.1 vs. NCBI nr
Match: gi|747076306|ref|XP_011085220.1| (PREDICTED: DNA damage-binding protein 1 [Sesamum indicum])

HSP 1 Score: 351.7 bits (901), Expect = 1.300e-93
Identity = 168/187 (89.84%), Postives = 176/187 (94.12%), Query Frame = 1 

		  

Query: 78  LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQTRTFSICSLKYNQASAEESEM 137
           LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQTRTF+ICSLKYNQ+S E+SEM
Sbjct: 685 LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQTRTFAICSLKYNQSSVEDSEM 744

Query: 138 HFVRLLDDQTFEIISTYALNTYECGCSILSCSFLDDIKVYYCVGTTYVLPEENEPTKGRI 197
           HF+RLLDDQTFE ISTY L+ +ECGCSILSCSF DD  VYYCVGT YV+PEENEPTKGRI
Sbjct: 745 HFIRLLDDQTFEFISTYPLDQFECGCSILSCSFSDDSNVYYCVGTAYVMPEENEPTKGRI 804

Query: 198 LVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLAAINQKIQLYKWMLRDDGTHELQSECG 257
           LVF VEDGKLQLIAEKETKGAVYSLNAFN KLLAAINQKIQLYKWMLRDDG+ ELQSECG
Sbjct: 805 LVFAVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGSRELQSECG 864

Query: 258 HHGHILA 265
           HHGHILA
Sbjct: 865 HHGHILA 871
[Close]
BLAST of Spo06142.1 vs. NCBI nr
Match: gi|720050921|ref|XP_010271927.1| (PREDICTED: DNA damage-binding protein 1-like [Nelumbo nucifera])

HSP 1 Score: 350.1 bits (897), Expect = 3.700e-93
Identity = 173/213 (81.22%), Postives = 186/213 (87.32%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H C F        LAIAKEGELTIGTIDDIQKLHIRS+PLGEHARRI
Sbjct: 659 KLLYSNVNLREVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSVPLGEHARRI 718

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
           CHQE+TRTF+ICSLKY Q+S EESEMHFVRLLDDQT E ISTY L+T+E GCSILSCSF 
Sbjct: 719 CHQEKTRTFAICSLKYGQSSTEESEMHFVRLLDDQTLEFISTYPLDTFEYGCSILSCSFA 778

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           DD  VYYCVGT YVLPEENEPTKGRILVF+VEDGKLQLIAEKETKGAVYSLNAFN KLLA
Sbjct: 779 DDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 838

Query: 241 AINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
           AINQKIQLYKWMLRDDG+HELQSECGHHGHILA
Sbjct: 839 AINQKIQLYKWMLRDDGSHELQSECGHHGHILA 871
[Close]
BLAST of Spo06142.1 vs. NCBI nr
Match: gi|702450359|ref|XP_010025491.1| (PREDICTED: DNA damage-binding protein 1 [Eucalyptus grandis])

HSP 1 Score: 349.4 bits (895), Expect = 6.300e-93
Identity = 173/213 (81.22%), Postives = 188/213 (88.26%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H CQF        LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI
Sbjct: 664 KLLYSNVNLKEVSHMCQFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 723

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
           CHQEQ+RTF+ICS+KYNQ+SAEESE+HFVRLLDDQTFE +STY L+ +E GCSILSCSF 
Sbjct: 724 CHQEQSRTFAICSMKYNQSSAEESEVHFVRLLDDQTFEFMSTYPLDPFEHGCSILSCSFS 783

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           DD  VYYCVGT YVLPEENEPTKGRILVF+VEDGKLQLIAEKETKGAVYSLNAFN KLLA
Sbjct: 784 DDSSVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 843

Query: 241 AINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
           AINQKIQLYKWMLRDDG+ ELQSECGHHGHILA
Sbjct: 844 AINQKIQLYKWMLRDDGSRELQSECGHHGHILA 876
[Close]
BLAST of Spo06142.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ELR8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g187500 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 6.600e-97
Identity = 180/213 (84.51%), Postives = 190/213 (89.20%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H C F        LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI
Sbjct: 659 KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 718

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
           CHQEQTRTF+ICSLKYNQASAEESEMHFVRLLD Q+FEIISTY L+TYECGCSILSCSF 
Sbjct: 719 CHQEQTRTFAICSLKYNQASAEESEMHFVRLLDGQSFEIISTYPLDTYECGCSILSCSFS 778

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           DD  VYYCVGT YVLPEENEPTKGRILVF+VEDGKLQLIAEKETKGAVYSLNAFN KLLA
Sbjct: 779 DDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 838

Query: 241 AINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
           AINQKIQLYKWMLRDDG+HELQSECGHHGHILA
Sbjct: 839 AINQKIQLYKWMLRDDGSHELQSECGHHGHILA 871
[Close]
BLAST of Spo06142.1 vs. UniProtKB/TrEMBL
Match: A0A059B7F5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04822 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 4.400e-93
Identity = 173/213 (81.22%), Postives = 188/213 (88.26%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H CQF        LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI
Sbjct: 664 KLLYSNVNLKEVSHMCQFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 723

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
           CHQEQ+RTF+ICS+KYNQ+SAEESE+HFVRLLDDQTFE +STY L+ +E GCSILSCSF 
Sbjct: 724 CHQEQSRTFAICSMKYNQSSAEESEVHFVRLLDDQTFEFMSTYPLDPFEHGCSILSCSFS 783

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           DD  VYYCVGT YVLPEENEPTKGRILVF+VEDGKLQLIAEKETKGAVYSLNAFN KLLA
Sbjct: 784 DDSSVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 843

Query: 241 AINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
           AINQKIQLYKWMLRDDG+ ELQSECGHHGHILA
Sbjct: 844 AINQKIQLYKWMLRDDGSRELQSECGHHGHILA 876
[Close]
BLAST of Spo06142.1 vs. UniProtKB/TrEMBL
Match: I1K4D0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 9.900e-93
Identity = 173/213 (81.22%), Postives = 185/213 (86.85%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H C F        LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI
Sbjct: 659 KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 718

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
           CHQEQ+RTF+ICSLKYN AS E+SEMHFVRLLDDQTFE ISTY+L+TYE GC I+SCSF 
Sbjct: 719 CHQEQSRTFAICSLKYNPASGEDSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFS 778

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           DD  VYYCVGT YVLPEENEPTKGRILVF VEDGKLQLIAEKETKGAVY LNAFN KLLA
Sbjct: 779 DDNNVYYCVGTAYVLPEENEPTKGRILVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLA 838

Query: 241 AINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
           AINQKIQLYKW+LRDDGTHELQSECGHHGHILA
Sbjct: 839 AINQKIQLYKWVLRDDGTHELQSECGHHGHILA 871
[Close]
BLAST of Spo06142.1 vs. UniProtKB/TrEMBL
Match: I1KSU0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.700e-92
Identity = 172/213 (80.75%), Postives = 185/213 (86.85%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H C F        LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI
Sbjct: 659 KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 718

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
           CHQEQ+RTF+ICSLKYN AS E+SEMHFVRLLDDQTFE ISTY+L+TYE GC I+SCSF 
Sbjct: 719 CHQEQSRTFAICSLKYNPASGEDSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFS 778

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           DD  VYYCVGT YVLPEENEPTKGRI+VF VEDGKLQLIAEKETKGAVY LNAFN KLLA
Sbjct: 779 DDNNVYYCVGTAYVLPEENEPTKGRIIVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLA 838

Query: 241 AINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
           AINQKIQLYKW+LRDDGTHELQSECGHHGHILA
Sbjct: 839 AINQKIQLYKWVLRDDGTHELQSECGHHGHILA 871
[Close]
BLAST of Spo06142.1 vs. UniProtKB/TrEMBL
Match: A0A022PY42_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a0005922mg PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.200e-92
Identity = 170/213 (79.81%), Postives = 187/213 (87.79%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H C F        LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI
Sbjct: 159 KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 218

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
           CHQEQTRTF+ICSLKYNQ+SAE+SEMHF+RLLDDQTF+ ISTY+L+ +ECGCSILSCSF 
Sbjct: 219 CHQEQTRTFAICSLKYNQSSAEDSEMHFIRLLDDQTFDFISTYSLDQFECGCSILSCSFS 278

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           DD  VYYC+GT YV+PEENEPTKGRILVF VEDGKLQLIAEKETKGAVYSLNAFN +LLA
Sbjct: 279 DDNNVYYCIGTAYVMPEENEPTKGRILVFAVEDGKLQLIAEKETKGAVYSLNAFNGRLLA 338

Query: 241 AINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
           AINQKIQLYKWMLRDDG+ ELQSE GHHGHILA
Sbjct: 339 AINQKIQLYKWMLRDDGSRELQSESGHHGHILA 371
[Close]
BLAST of Spo06142.1 vs. ExPASy Swiss-Prot
Match: DDB1A_ARATH (DNA damage-binding protein 1a OS=Arabidopsis thaliana GN=DDB1A PE=1 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 4.500e-91
Identity = 168/213 (78.87%), Postives = 185/213 (86.85%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H C F        LAIA+EGELTIGTIDDIQKLHIR+IPLGEHARRI
Sbjct: 659 KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRI 718

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
           CHQEQTRTF ICSL  NQ+++EESEMHFVRLLDDQTFE +STY L+++E GCSILSCSF 
Sbjct: 719 CHQEQTRTFGICSLG-NQSNSEESEMHFVRLLDDQTFEFMSTYPLDSFEYGCSILSCSFT 778

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           +D  VYYCVGT YVLPEENEPTKGRILVF+VEDG+LQLIAEKETKGAVYSLNAFN KLLA
Sbjct: 779 EDKNVYYCVGTAYVLPEENEPTKGRILVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLA 838

Query: 241 AINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
           AINQKIQLYKWMLRDDGT ELQSECGHHGHILA
Sbjct: 839 AINQKIQLYKWMLRDDGTRELQSECGHHGHILA 870
[Close]
BLAST of Spo06142.1 vs. ExPASy Swiss-Prot
Match: DDB1B_ARATH (DNA damage-binding protein 1b OS=Arabidopsis thaliana GN=DDB1B PE=2 SV=2)

HSP 1 Score: 324.7 bits (831), Expect = 1.000e-87
Identity = 161/213 (75.59%), Postives = 181/213 (84.98%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H C F        LAIA+EGELTIGTIDDIQKLHIR+IP+GEHARRI
Sbjct: 659 KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRI 718

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
           CHQEQTRTF+I  L+ N+ SAEESE HFVRLLD Q+FE +S+Y L+ +ECGCSILSCSF 
Sbjct: 719 CHQEQTRTFAISCLR-NEPSAEESESHFVRLLDAQSFEFLSSYPLDAFECGCSILSCSFT 778

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           DD  VYYCVGT YVLPEENEPTKGRILVF+VE+G+LQLI EKETKGAVYSLNAFN KLLA
Sbjct: 779 DDKNVYYCVGTAYVLPEENEPTKGRILVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLA 838

Query: 241 AINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
           +INQKIQLYKWMLRDDGT ELQSECGHHGHILA
Sbjct: 839 SINQKIQLYKWMLRDDGTRELQSECGHHGHILA 870
[Close]
BLAST of Spo06142.1 vs. ExPASy Swiss-Prot
Match: DDB1_SOLLC (DNA damage-binding protein 1 OS=Solanum lycopersicum GN=DDB1 PE=1 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.400e-87
Identity = 161/214 (75.23%), Postives = 182/214 (85.05%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H C F        LAIAKEGELTIGTID+IQKLHIRSIPLGEHARRI
Sbjct: 659 KLLYSNVNLKEVSHMCPFNVAAFPDSLAIAKEGELTIGTIDEIQKLHIRSIPLGEHARRI 718

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
            HQEQTRTF++CS+KY Q++A++ EMHFVRLLDDQTFE ISTY L+ +E GCSILSCSF 
Sbjct: 719 SHQEQTRTFALCSVKYTQSNADDPEMHFVRLLDDQTFEFISTYPLDQFEYGCSILSCSFS 778

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           DD  VYYC+GT YV+PEENEPTKGRILVF+VEDGKLQLIAEKETKGAVYSLNAFN KLLA
Sbjct: 779 DDSNVYYCIGTAYVMPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 838

Query: 241 AINQKIQLYKWMLRDD-GTHELQSECGHHGHILA 265
           AINQKIQLYKW  R+D G+ ELQ+ECGHHGHILA
Sbjct: 839 AINQKIQLYKWASREDGGSRELQTECGHHGHILA 872
[Close]
BLAST of Spo06142.1 vs. ExPASy Swiss-Prot
Match: DDB1_SOLCE (DNA damage-binding protein 1 OS=Solanum cheesmaniae GN=DDB1 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.400e-87
Identity = 161/214 (75.23%), Postives = 182/214 (85.05%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H C F        LAIAKEGELTIGTID+IQKLHIRSIPLGEHARRI
Sbjct: 664 KLLYSNVNLKEVSHMCPFNVAAFPDSLAIAKEGELTIGTIDEIQKLHIRSIPLGEHARRI 723

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
            HQEQTRTF++CS+KY Q++A++ EMHFVRLLDDQTFE ISTY L+ +E GCSILSCSF 
Sbjct: 724 SHQEQTRTFALCSVKYTQSNADDPEMHFVRLLDDQTFEFISTYPLDQFEYGCSILSCSFS 783

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           DD  VYYC+GT YV+PEENEPTKGRILVF+VEDGKLQLIAEKETKGAVYSLNAFN KLLA
Sbjct: 784 DDSNVYYCIGTAYVMPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 843

Query: 241 AINQKIQLYKWMLRDD-GTHELQSECGHHGHILA 265
           AINQKIQLYKW  R+D G+ ELQ+ECGHHGHILA
Sbjct: 844 AINQKIQLYKWASREDGGSRELQTECGHHGHILA 877
[Close]
BLAST of Spo06142.1 vs. ExPASy Swiss-Prot
Match: DDB1_MOUSE (DNA damage-binding protein 1 OS=Mus musculus GN=Ddb1 PE=1 SV=2)

HSP 1 Score: 162.2 bits (409), Expect = 9.000e-39
Identity = 89/230 (38.70%), Postives = 125/230 (54.35%), Query Frame = 1 

		  

Query: 73  GHCQFLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQTRTFSICSLK------ 132
           G+   LA+A    LTIGTID+IQKLHIR++PL E  R+IC+QE ++ F + S +      
Sbjct: 686 GYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDS 745

Query: 133 --------------------------------YNQASAEESEMHFVRLLDDQTFEIISTY 192
                                           +  +  EE E+H + ++D  TFE++  +
Sbjct: 746 SGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAH 805

Query: 193 ALNTYECGCSILSCSFLDDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKE 252
                E   S++SC    D   Y+ VGT  V PEE EP +GRI+VF   DGKLQ +AEKE
Sbjct: 806 QFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKE 865

Query: 253 TKGAVYSLNAFNDKLLAAINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
            KGAVYS+  FN KLLA+IN  ++LY+W        EL++EC H+ +I+A
Sbjct: 866 VKGAVYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMA 911
[Close]
BLAST of Spo06142.1 vs. TAIR (Arabidopsis)
Match: AT4G05420.1 (damaged DNA binding protein 1A)

HSP 1 Score: 335.9 bits (860), Expect = 2.600e-92
Identity = 168/213 (78.87%), Postives = 185/213 (86.85%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H C F        LAIA+EGELTIGTIDDIQKLHIR+IPLGEHARRI
Sbjct: 659 KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRI 718

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
           CHQEQTRTF ICSL  NQ+++EESEMHFVRLLDDQTFE +STY L+++E GCSILSCSF 
Sbjct: 719 CHQEQTRTFGICSLG-NQSNSEESEMHFVRLLDDQTFEFMSTYPLDSFEYGCSILSCSFT 778

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           +D  VYYCVGT YVLPEENEPTKGRILVF+VEDG+LQLIAEKETKGAVYSLNAFN KLLA
Sbjct: 779 EDKNVYYCVGTAYVLPEENEPTKGRILVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLA 838

Query: 241 AINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
           AINQKIQLYKWMLRDDGT ELQSECGHHGHILA
Sbjct: 839 AINQKIQLYKWMLRDDGTRELQSECGHHGHILA 870
[Close]
BLAST of Spo06142.1 vs. TAIR (Arabidopsis)
Match: AT4G21100.1 (damaged DNA binding protein 1B)

HSP 1 Score: 324.7 bits (831), Expect = 5.900e-89
Identity = 161/213 (75.59%), Postives = 181/213 (84.98%), Query Frame = 1 

		  

Query: 61  QIQYQNSSVIQRGH-CQF--------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRI 120
           ++ Y N ++ +  H C F        LAIA+EGELTIGTIDDIQKLHIR+IP+GEHARRI
Sbjct: 659 KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRI 718

Query: 121 CHQEQTRTFSICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALNTYECGCSILSCSFL 180
           CHQEQTRTF+I  L+ N+ SAEESE HFVRLLD Q+FE +S+Y L+ +ECGCSILSCSF 
Sbjct: 719 CHQEQTRTFAISCLR-NEPSAEESESHFVRLLDAQSFEFLSSYPLDAFECGCSILSCSFT 778

Query: 181 DDIKVYYCVGTTYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNDKLLA 240
           DD  VYYCVGT YVLPEENEPTKGRILVF+VE+G+LQLI EKETKGAVYSLNAFN KLLA
Sbjct: 779 DDKNVYYCVGTAYVLPEENEPTKGRILVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLA 838

Query: 241 AINQKIQLYKWMLRDDGTHELQSECGHHGHILA 265
           +INQKIQLYKWMLRDDGT ELQSECGHHGHILA
Sbjct: 839 SINQKIQLYKWMLRDDGTRELQSECGHHGHILA 870
The following BLAST results are available for this feature:
BLAST of Spo06142.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731351428|ref|XP_010687033.1|9.5e-9784.5PREDICTED: DNA damage-binding ... [more]
gi|720098797|ref|XP_010247742.1|2.0e-9482.6PREDICTED: DNA damage-binding ... [more]
gi|747076306|ref|XP_011085220.1|1.3e-9389.8PREDICTED: DNA damage-binding ... [more]
gi|720050921|ref|XP_010271927.1|3.7e-9381.2PREDICTED: DNA damage-binding ... [more]
gi|702450359|ref|XP_010025491.1|6.3e-9381.2PREDICTED: DNA damage-binding ... [more]
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BLAST of Spo06142.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8ELR8_BETVU6.6e-9784.5Uncharacterized protein OS=Bet... [more]
A0A059B7F5_EUCGR4.4e-9381.2Uncharacterized protein OS=Euc... [more]
I1K4D0_SOYBN9.9e-9381.2Uncharacterized protein OS=Gly... [more]
I1KSU0_SOYBN1.7e-9280.7Uncharacterized protein OS=Gly... [more]
A0A022PY42_ERYGU2.2e-9279.8Uncharacterized protein (Fragm... [more]
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BLAST of Spo06142.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
DDB1A_ARATH4.5e-9178.8DNA damage-binding protein 1a ... [more]
DDB1B_ARATH1.0e-8775.5DNA damage-binding protein 1b ... [more]
DDB1_SOLLC1.4e-8775.2DNA damage-binding protein 1 O... [more]
DDB1_SOLCE1.4e-8775.2DNA damage-binding protein 1 O... [more]
DDB1_MOUSE9.0e-3938.7DNA damage-binding protein 1 O... [more]
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BLAST of Spo06142.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G05420.12.6e-9278.8damaged DNA binding protein 1A[more]
AT4G21100.15.9e-8975.5damaged DNA binding protein 1B[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004871Cleavage/polyadenylation specificity factor, A subunit, C-terminalPFAMPF03178CPSF_Acoord: 139..246
score: 2.1
NoneNo IPR availablePANTHERPTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYcoord: 78..266
score: 1.1

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo130950.82Barchart | Table