Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTAATACAATAAATACCAACTAACCCAACCAACAAACTTTTTCATCAACTCCTATCAAACACTTCCAACTCTTTAATTTCAATCACATAAACTGATAAACACACACACACACACACACTATAGTTGTAGTGTATATATATATACATTACACATACCCTCTCTTCAATTAATTCCCAACTTCACTTACTAACCATACTTGCATTACCACTAATTTCACATTATTATACAATTCAACAATGTCCATTACCATACACCATGGCCACCTCTCTTATTTTTTCTTCTATTTCTTGTTATTACAACCACAACAATTCCTTGTAGCTGCCGGTACCGTACCGGCGGTGATAGTGTTCGGAGACTCGTCTGTTGACACCGGGAACAATAATGGGATACAAACTTTGCTTAAGAGCAACTTTGAGCCTTATGGTCGTGACTTTGATGGTGGCCGCCCCACGGGTCGATTCTCTAACGGGCGGGTGCCCGTCGATTTCTTCTCCGAATACTTCGGGCTTAAGAAAACCGTTCCTGCGTATTTGGATCCTAGTTTTAGTATGGAAGATTTTGTTACTGGAGTCAATTTTGCTTCTGCTGGTACTGGCTATGATAATACCACTTCTCAAGTGCTTGTAAGTATTACTACTTCACTTATTTAGCTTCTTTAAAGAAATGAGGATAACTTTCAACTTTGATACATGCAACTTAATTATGGAGTCACGAGTTCTTATTTACAATGGGTGTACAATAAATATTGTACACCAGAGTAAAAGTTAACTCAAAATGCTTAAAAGTTAAGCATATACTACGTATATGTTAAAGTTATCTTTTTTTCAGTGATAAATTTTTTCATTTTAGTAAAACTTATTTCTTCAGAATCACTAATAATGTATAAAATTAAGTATTTAACCTTTTAAAATATTTATCTATCAAATTTTTTGTACTAATATAAAAGTTAATCAAAACTAGGTTAAAGTTACAAAAAAAAGGTTAATGTTATCTTGGTGTACAATACATTTATTGTACACCTTGTGCGCACAAGACCTTTTATTATGGAGTAGTAATTTAATTTAAAAACTAGGATATTTTAGTATTTTTACGTGGATAACTTTTAAGCATTTTGAGTTAGCTTTTAATCTGGTGTACAATATTTATTGTACACCCATTATAAATAAGAATTTGTGCTGGCAAAAACTTTGATCAAATGATTATTGGAACATGAAAAAGAAACAAAAAAAAAAAAGCCTAGTCGTAAATAATGAAAAATATCATTATTTCTTTCCCCCCTCCTACTTATGCTAGCAATTTATTATCATTATTTAAATTATTAATAGTCATAAATGTTGTAATTATACGCCCTTTTTTCGTGGGCAGTAAGGCTATTTTGTATGTGGCGGTTATTACAATTCGTGGACGTCTATGCACAATGGTGGAAAATGATAAATCCAAGGAAGAATTTCACTTCTTCCAAGGAAATCACCTTTAAAAAAATGTGGATTTCCTTGGAAGAAGCAAAATTTTCACAATGGTTTACAATGATCATGATGCACCTAAAGAACATATGTATACACGGAAAAAAAAACATATGATATATTATTTCACTTTTTATTAATATAAATAATAAATATATATATTCACATTTTTTTCACGTAAAGTAATGTTCTTTTAGTTATGCACTTGTGTTTTTAAAATCACCATGTTCATTGTGCACCATAGTTCATCATCTGATTTTATTTTTTTGACAGAAAAATAGAGTGGGTATTTATTGTAAATTAATTTTCACCAAAGTAATTAAGTTTACAGGGAAAAATATCAGGAAGCTAAATTATACCTAGTTTCACCTTTTCACTAGGTGTATTATCAAATTACAATCCCATTTAACATGAAAAATATCTAACACGGAGTATAAATGAAAATTCATGGGAAGTAAGGATATGAGTATTTTATATAAAAAAACAGAAATTTACGAGTTTCTTATTTACAGAGTATATATGAAATTTTATTTTAAGAAAAAGAGTATATATGAAAGTAATGATAATTGAATTAGCAATGACTACAGGCCTACAGGCTACAGCTATGCACGTCGAATATATGAGTAGTTGAAGTATCTGTTTTAGACACACTTTAAATTCAAAGCCGAAAGCTACCTACTTTTATGAGGAGGTGTTTGGTACGCACGCTGGTATGGGGTTGGAATCAGGAATGATATCAAGGTGGTACGAGTTTGAAACTTGATTCTTAATATTATGTGTTTGGTTAGATTCGGAGATGAGTTTTTCCTATTTAATTTTATGCCTGAAGTAAACGTATGAGCCATACACACCTCTTCCCTAGGTTTCTAAACCTCGTATTTTAGGGGTTTGAGGTATGTGTTTAAACCTCTTAAAAATTTCAACCAAATATATGGTATGGGTTTAGACCATCCTAAACTCATATATATATACCTCATACCTAATACGTAGGATAAAAATATAAATATTATTAATGTTAATTAAAATTTCTATACAAGTTCTTATAAAAGATTACTATGTAGTACAAATTACAGAGTAGTAAACTGTGATCATATGCCACGTCATTCACCTATTTTTTAAAAACATAACATATACTTTGTAGTTTTTAGCATGATGGATATGATAGTTAAGTAAATATTAGACGGTAGTATACGAGACTGTCAAGTGTTTGCGCTCCAAACAAAGGCAGATTTCTCTTTGTTAAAAAAAAAGAAAAAACAAAGGCAGATTTGTCTGTTTTCAAGTGTTGGAGATGGACTGGACAAGTTTGGAAGGTTCCAAGAAACAAGTTTGAAGTTATTGGCATTTAAGTTCACCTACATTATTTTGGGCTGCGCTATACTGAAGTTCCTGTTTCCAACGTGTCACTAACAACTTTACAATTTACAATTTACATTGTCTCCTCTGTCATTGAATTTTTTGCCTTTTGTTGCAACTTCACAAGTAATTTATTGGGTGTGCATTTCTCCTACCACTTTGACTTTATTTTTACAATCTTGTACTCGGCTCCTACATTATTTTTGGTGTCTTATACTTGGATTTAATTGCTTTCTCAAAGTAATAAAAAAGAATTAAATAAAACAAAATGATATGATATATGCATTCCTTAATATTAGAAGTACGTAAAGTTAAACATATAGTAAACGTACATATATATTATTACACCGAATGCTTATGAGCTAGCTTGTTTGAATGGTTAACAGAACGTAATACCATTATGGAAGGAAGTCGATTATTACAAGGAGTATCAAGTGAAATTACGAGAGTTTGTTGGGGCAGAAAAGGCAAATGAAATAATTAGTAAAGGGGTATACTTAGTGAGCATGGGAACGAACGACTTCCTAGAAAACTACTACTTATTACCTACAACTAGGGCGTGTTACACGATCCAAGAGTTCGAAGACAAACTCATTGGTATCGCGAAGCAGTTTGTGGAGGAGATTTATAGTCTTGGTGCTCGGAAGATTTCGCTGGCCGGCGTTCCTCCTATGGGTTGCTTGCCACTAGAGAGGACCATAAATTTCATGGCAACTCTTGAATGCAACGAAGACTACAACAATGTTGCCCGTGAATTTAATGCTAAAATGCATGACTTGGTCAAACTACTCAACAAGCAATTGCCTGGTATCCATGTCGTTTTTTCCAACCCCTATAATTCTCTTCTCCAAATTATCAAAAGGCCTTCATTATTTGGTACGTTTTCTTAAATATTACTACAATTCTACATACATATACATGCATGAATATACTATGTATGTATATAATTATATATGCATGCGTACATACATATAGATATTTTGATAACTTTATATGACATTTTCCTACTTTTGGATGCTTATAAATGATCATTAAGGCTTAGATTAAAATCATTGTCCAAGTAGGTACAATTTAGTTGGATGCTAATATATAATAATTTTATATATGCCATTAAACCCATATATCATATATGGAAACAAGAAAATTATAAATGAGTTTATTGGGCCATCTTCTTTTATGGGTGACAATAAAGTCCAAGTAGGTGGAATGGAATGAAGCTTTGTTTTCTTCGTATGGTACGATCTAATTTGTCTAGTTTCTGGCGTGAAATAGTTTGAATTTTTCTGGTTTGAATATCTTATGTTAGTGCTAATTGCTTTCTTTGATCCGGTGAGGTCTGAATGTTCATTATCATGATGAATTTGAGACGTACGATACTTTAATAGTTGCAGTAGTAGTTGATTTTATATGGGGTACGTAAGTATGTAGTTGATTGACAAAATGAGATGAATTGACAGGGATGGACGTAACATATAGGGCATGTTGTGGGACTGGATTGGTGGAGATGGGTTATCTTTGTGTTCTTGATAATCCATGGGCTTGCCTTGACGCTAACAAATATGTTTTCTGGGATTCTTTTCATCCAACTGAGAAAACCAACCAGATTATGGCTCAACATCTCTTCAAAACTGTCTTACACAGATTTCTTTGAAGTAATTTATACCACAATGTATTTGAGCAACGACATATATTGGAACTTATAAAGTTTTCATTTCTTTATAAATAATAGTTTTTATTATTAGATTTTCAAAATGTAACTTCTCATTGTACATCGATTATATTGAATATTTTATACAATGTATTTAGCACACTATTTTTTCTATATACTAGAAGATCAGATGTTTAAAAGCCAGCCATGTAATACCTTGCTCAATTGGTTACCAATAAAAGTTTGGAGTATATCTTTGTATGTGTTGGTTCCTGATGATGACCTCAATATATGTCTCATGGTACGCAGTATTTTTAAACACGCTCATAACTCG AATTAATACAATAAATACCAACTAACCCAACCAACAAACTTTTTCATCAACTCCTATCAAACACTTCCAACTCTTTAATTTCAATCACATAAACTGATAAACACACACACACACACACACTATAGTTGTAGTGTATATATATATACATTACACATACCCTCTCTTCAATTAATTCCCAACTTCACTTACTAACCATACTTGCATTACCACTAATTTCACATTATTATACAATTCAACAATGTCCATTACCATACACCATGGCCACCTCTCTTATTTTTTCTTCTATTTCTTGTTATTACAACCACAACAATTCCTTGTAGCTGCCGGTACCGTACCGGCGGTGATAGTGTTCGGAGACTCGTCTGTTGACACCGGGAACAATAATGGGATACAAACTTTGCTTAAGAGCAACTTTGAGCCTTATGGTCGTGACTTTGATGGTGGCCGCCCCACGGGTCGATTCTCTAACGGGCGGGTGCCCGTCGATTTCTTCTCCGAATACTTCGGGCTTAAGAAAACCGTTCCTGCGTATTTGGATCCTAGTTTTAGTATGGAAGATTTTGTTACTGGAGTCAATTTTGCTTCTGCTGGTACTGGCTATGATAATACCACTTCTCAAGTGCTTAACGTAATACCATTATGGAAGGAAGTCGATTATTACAAGGAGTATCAAGTGAAATTACGAGAGTTTGTTGGGGCAGAAAAGGCAAATGAAATAATTAGTAAAGGGGTATACTTAGTGAGCATGGGAACGAACGACTTCCTAGAAAACTACTACTTATTACCTACAACTAGGGCGTGTTACACGATCCAAGAGTTCGAAGACAAACTCATTGGTATCGCGAAGCAGTTTGTGGAGGAGATTTATAGTCTTGGTGCTCGGAAGATTTCGCTGGCCGGCGTTCCTCCTATGGGTTGCTTGCCACTAGAGAGGACCATAAATTTCATGGCAACTCTTGAATGCAACGAAGACTACAACAATGTTGCCCGTGAATTTAATGCTAAAATGCATGACTTGGTCAAACTACTCAACAAGCAATTGCCTGGTATCCATGTCGTTTTTTCCAACCCCTATAATTCTCTTCTCCAAATTATCAAAAGGCCTTCATTATTTGGGATGGACGTAACATATAGGGCATGTTGTGGGACTGGATTGGTGGAGATGGGTTATCTTTGTGTTCTTGATAATCCATGGGCTTGCCTTGACGCTAACAAATATGTTTTCTGGGATTCTTTTCATCCAACTGAGAAAACCAACCAGATTATGGCTCAACATCTCTTCAAAACTGTCTTACACAGATTTCTTTGAAGTAATTTATACCACAATGTATTTGAGCAACGACATATATTGGAACTTATAAAGTTTTCATTTCTTTATAAATAATAGTTTTTATTATTAGATTTTCAAAATGTAACTTCTCATTGTACATCGATTATATTGAATATTTTATACAATGTATTTAGCACACTATTTTTTCTATATACTAGAAGATCAGATGTTTAAAAGCCAGCCATGTAATACCTTGCTCAATTGGTTACCAATAAAAGTTTGGAGTATATCTTTGTATGTGTTGGTTCCTGATGATGACCTCAATATATGTCTCATGGTACGCAGTATTTTTAAACACGCTCATAACTCG ATGTCCATTACCATACACCATGGCCACCTCTCTTATTTTTTCTTCTATTTCTTGTTATTACAACCACAACAATTCCTTGTAGCTGCCGGTACCGTACCGGCGGTGATAGTGTTCGGAGACTCGTCTGTTGACACCGGGAACAATAATGGGATACAAACTTTGCTTAAGAGCAACTTTGAGCCTTATGGTCGTGACTTTGATGGTGGCCGCCCCACGGGTCGATTCTCTAACGGGCGGGTGCCCGTCGATTTCTTCTCCGAATACTTCGGGCTTAAGAAAACCGTTCCTGCGTATTTGGATCCTAGTTTTAGTATGGAAGATTTTGTTACTGGAGTCAATTTTGCTTCTGCTGGTACTGGCTATGATAATACCACTTCTCAAGTGCTTAACGTAATACCATTATGGAAGGAAGTCGATTATTACAAGGAGTATCAAGTGAAATTACGAGAGTTTGTTGGGGCAGAAAAGGCAAATGAAATAATTAGTAAAGGGGTATACTTAGTGAGCATGGGAACGAACGACTTCCTAGAAAACTACTACTTATTACCTACAACTAGGGCGTGTTACACGATCCAAGAGTTCGAAGACAAACTCATTGGTATCGCGAAGCAGTTTGTGGAGGAGATTTATAGTCTTGGTGCTCGGAAGATTTCGCTGGCCGGCGTTCCTCCTATGGGTTGCTTGCCACTAGAGAGGACCATAAATTTCATGGCAACTCTTGAATGCAACGAAGACTACAACAATGTTGCCCGTGAATTTAATGCTAAAATGCATGACTTGGTCAAACTACTCAACAAGCAATTGCCTGGTATCCATGTCGTTTTTTCCAACCCCTATAATTCTCTTCTCCAAATTATCAAAAGGCCTTCATTATTTGGGATGGACGTAACATATAGGGCATGTTGTGGGACTGGATTGGTGGAGATGGGTTATCTTTGTGTTCTTGATAATCCATGGGCTTGCCTTGACGCTAACAAATATGTTTTCTGGGATTCTTTTCATCCAACTGAGAAAACCAACCAGATTATGGCTCAACATCTCTTCAAAACTGTCTTACACAGATTTCTTTGA MSITIHHGHLSYFFFYFLLLQPQQFLVAAGTVPAVIVFGDSSVDTGNNNGIQTLLKSNFEPYGRDFDGGRPTGRFSNGRVPVDFFSEYFGLKKTVPAYLDPSFSMEDFVTGVNFASAGTGYDNTTSQVLNVIPLWKEVDYYKEYQVKLREFVGAEKANEIISKGVYLVSMGTNDFLENYYLLPTTRACYTIQEFEDKLIGIAKQFVEEIYSLGARKISLAGVPPMGCLPLERTINFMATLECNEDYNNVAREFNAKMHDLVKLLNKQLPGIHVVFSNPYNSLLQIIKRPSLFGMDVTYRACCGTGLVEMGYLCVLDNPWACLDANKYVFWDSFHPTEKTNQIMAQHLFKTVLHRFL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo06165.1 vs. NCBI nr
Match: gi|902144492|gb|KNA04913.1| (hypothetical protein SOVF_195280 [Spinacia oleracea]) HSP 1 Score: 736.9 bits (1901), Expect = 1.700e-209 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 1
BLAST of Spo06165.1 vs. NCBI nr
Match: gi|731355042|ref|XP_010688929.1| (PREDICTED: GDSL esterase/lipase At2g42990-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 572.8 bits (1475), Expect = 4.200e-160 Identity = 272/346 (78.61%), Postives = 307/346 (88.73%), Query Frame = 1
BLAST of Spo06165.1 vs. NCBI nr
Match: gi|147802902|emb|CAN70740.1| (hypothetical protein VITISV_013920 [Vitis vinifera]) HSP 1 Score: 466.1 bits (1198), Expect = 5.600e-128 Identity = 227/350 (64.86%), Postives = 269/350 (76.86%), Query Frame = 1
BLAST of Spo06165.1 vs. NCBI nr
Match: gi|731409599|ref|XP_010657253.1| (PREDICTED: GDSL esterase/lipase At4g26790-like [Vitis vinifera]) HSP 1 Score: 466.1 bits (1198), Expect = 5.600e-128 Identity = 227/350 (64.86%), Postives = 270/350 (77.14%), Query Frame = 1
BLAST of Spo06165.1 vs. NCBI nr
Match: gi|747104458|ref|XP_011100466.1| (PREDICTED: GDSL esterase/lipase At2g04570-like [Sesamum indicum]) HSP 1 Score: 461.8 bits (1187), Expect = 1.100e-126 Identity = 217/331 (65.56%), Postives = 265/331 (80.06%), Query Frame = 1
BLAST of Spo06165.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDZ5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_195280 PE=4 SV=1) HSP 1 Score: 736.9 bits (1901), Expect = 1.200e-209 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 1
BLAST of Spo06165.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BRD1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g204390 PE=4 SV=1) HSP 1 Score: 572.8 bits (1475), Expect = 2.900e-160 Identity = 272/346 (78.61%), Postives = 307/346 (88.73%), Query Frame = 1
BLAST of Spo06165.1 vs. UniProtKB/TrEMBL
Match: A5BZB6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013920 PE=4 SV=1) HSP 1 Score: 466.1 bits (1198), Expect = 3.900e-128 Identity = 227/350 (64.86%), Postives = 269/350 (76.86%), Query Frame = 1
BLAST of Spo06165.1 vs. UniProtKB/TrEMBL
Match: D7TEG1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g01590 PE=4 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 4.400e-124 Identity = 219/334 (65.57%), Postives = 259/334 (77.54%), Query Frame = 1
BLAST of Spo06165.1 vs. UniProtKB/TrEMBL
Match: A0A162A676_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_019252 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 2.900e-123 Identity = 218/346 (63.01%), Postives = 267/346 (77.17%), Query Frame = 1
BLAST of Spo06165.1 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 1.500e-117 Identity = 194/349 (55.59%), Postives = 253/349 (72.49%), Query Frame = 1
BLAST of Spo06165.1 vs. ExPASy Swiss-Prot
Match: GDL66_ARATH (GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 2.600e-117 Identity = 207/342 (60.53%), Postives = 252/342 (73.68%), Query Frame = 1
BLAST of Spo06165.1 vs. ExPASy Swiss-Prot
Match: GDL48_ARATH (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 2.200e-116 Identity = 188/329 (57.14%), Postives = 252/329 (76.60%), Query Frame = 1
BLAST of Spo06165.1 vs. ExPASy Swiss-Prot
Match: GDL24_ARATH (GDSL esterase/lipase At1g58480 OS=Arabidopsis thaliana GN=At1g58480 PE=2 SV=2) HSP 1 Score: 297.4 bits (760), Expect = 2.100e-79 Identity = 142/325 (43.69%), Postives = 211/325 (64.92%), Query Frame = 1
BLAST of Spo06165.1 vs. ExPASy Swiss-Prot
Match: GDL27_ARATH (GDSL esterase/lipase At1g59406 OS=Arabidopsis thaliana GN=At1g59406 PE=2 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 2.800e-79 Identity = 142/325 (43.69%), Postives = 212/325 (65.23%), Query Frame = 1
BLAST of Spo06165.1 vs. TAIR (Arabidopsis)
Match: AT2G04570.1 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 424.1 bits (1089), Expect = 8.600e-119 Identity = 194/349 (55.59%), Postives = 253/349 (72.49%), Query Frame = 1
BLAST of Spo06165.1 vs. TAIR (Arabidopsis)
Match: AT4G26790.1 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 423.3 bits (1087), Expect = 1.500e-118 Identity = 207/342 (60.53%), Postives = 252/342 (73.68%), Query Frame = 1
BLAST of Spo06165.1 vs. TAIR (Arabidopsis)
Match: AT2G42990.1 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 420.2 bits (1079), Expect = 1.200e-117 Identity = 188/329 (57.14%), Postives = 252/329 (76.60%), Query Frame = 1
BLAST of Spo06165.1 vs. TAIR (Arabidopsis)
Match: AT1G58725.1 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 297.0 bits (759), Expect = 1.600e-80 Identity = 142/325 (43.69%), Postives = 212/325 (65.23%), Query Frame = 1
BLAST of Spo06165.1 vs. TAIR (Arabidopsis)
Match: AT1G59406.1 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 297.0 bits (759), Expect = 1.600e-80 Identity = 142/325 (43.69%), Postives = 212/325 (65.23%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06165.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo06165.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo06165.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo06165.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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