Spo06220 (gene) | SpinachBase

Overview


Name	Spo06220
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Ethylene-responsive transcription factor 10
Location	SpoScf_01479 : 79431 .. 80174 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCAGGAAATTACTTCTACAATAATCAAAGACCAAAAAGTTGGCAGTTGGATTCACAGCAAGAAATGAGTATCATGGTTTCCGCTCTTAATCAAGTCATTTCCGGCAACGGCGGCGGCGGCGGAGGACAAGAACCACCTGAAGATGGGTCCCATTTAGTTTACGAGGCGCTTCGAAACCAACAGAGTTTCTCCACGTGGTCACCCCCAACATCCGCCACCTCATCAGGCTTCCCGCCAAATTCCCAGATTGAAAATGCAGAAACTACTACCAGTAGCAGTAGTAACAACAGTGGAAAACAGAGGACTAGAAGGTATAATAGAAACAAATACAGGGGTGTACGGCAGAGGCCATGGGGGAAATGGGCCTCCGAAATCCGGGACCCGCATCGGGCGGTTCGAATGTGGCTCGGAACTTTCGAAACCGCCGAGGAGGCTGCTAGAGCGTACGATCGAGCTGCGGTTCGATTCAGGGGACCACGGGCCAAACTTAATTTCAGTGTCTCTGATTATTTACCACAACTTGAAGAGTATAATCGTAATAATGTTCATTACCGAAATCAAGAACAGCAACAGAGGAGTAACAATGGAAGTCCTAGTAATCATCAAGAAGTAGAAACGAGTGAGTTCGTGCAGATAACGGATGGTGATGAACTTGAGCATTGGATGAATGGCATGATTGATGATAGTCCTCCTTCTTTGTTTTACGGGGAATCGCCATTTGGAAGACCTGAGTTTTAG

mRNA sequence

ATGGAAGCAGGAAATTACTTCTACAATAATCAAAGACCAAAAAGTTGGCAGTTGGATTCACAGCAAGAAATGAGTATCATGGTTTCCGCTCTTAATCAAGTCATTTCCGGCAACGGCGGCGGCGGCGGAGGACAAGAACCACCTGAAGATGGGTCCCATTTAGTTTACGAGGCGCTTCGAAACCAACAGAGTTTCTCCACGTGGTCACCCCCAACATCCGCCACCTCATCAGGCTTCCCGCCAAATTCCCAGATTGAAAATGCAGAAACTACTACCAGTAGCAGTAGTAACAACAGTGGAAAACAGAGGACTAGAAGGTATAATAGAAACAAATACAGGGGTGTACGGCAGAGGCCATGGGGGAAATGGGCCTCCGAAATCCGGGACCCGCATCGGGCGGTTCGAATGTGGCTCGGAACTTTCGAAACCGCCGAGGAGGCTGCTAGAGCGTACGATCGAGCTGCGGTTCGATTCAGGGGACCACGGGCCAAACTTAATTTCAGTGTCTCTGATTATTTACCACAACTTGAAGAGTATAATCGTAATAATGTTCATTACCGAAATCAAGAACAGCAACAGAGGAGTAACAATGGAAGTCCTAGTAATCATCAAGAAGTAGAAACGAGTGAGTTCGTGCAGATAACGGATGGTGATGAACTTGAGCATTGGATGAATGGCATGATTGATGATAGTCCTCCTTCTTTGTTTTACGGGGAATCGCCATTTGGAAGACCTGAGTTTTAG

Coding sequence (CDS)

ATGGAAGCAGGAAATTACTTCTACAATAATCAAAGACCAAAAAGTTGGCAGTTGGATTCACAGCAAGAAATGAGTATCATGGTTTCCGCTCTTAATCAAGTCATTTCCGGCAACGGCGGCGGCGGCGGAGGACAAGAACCACCTGAAGATGGGTCCCATTTAGTTTACGAGGCGCTTCGAAACCAACAGAGTTTCTCCACGTGGTCACCCCCAACATCCGCCACCTCATCAGGCTTCCCGCCAAATTCCCAGATTGAAAATGCAGAAACTACTACCAGTAGCAGTAGTAACAACAGTGGAAAACAGAGGACTAGAAGGTATAATAGAAACAAATACAGGGGTGTACGGCAGAGGCCATGGGGGAAATGGGCCTCCGAAATCCGGGACCCGCATCGGGCGGTTCGAATGTGGCTCGGAACTTTCGAAACCGCCGAGGAGGCTGCTAGAGCGTACGATCGAGCTGCGGTTCGATTCAGGGGACCACGGGCCAAACTTAATTTCAGTGTCTCTGATTATTTACCACAACTTGAAGAGTATAATCGTAATAATGTTCATTACCGAAATCAAGAACAGCAACAGAGGAGTAACAATGGAAGTCCTAGTAATCATCAAGAAGTAGAAACGAGTGAGTTCGTGCAGATAACGGATGGTGATGAACTTGAGCATTGGATGAATGGCATGATTGATGATAGTCCTCCTTCTTTGTTTTACGGGGAATCGCCATTTGGAAGACCTGAGTTTTAG

Protein sequence

MEAGNYFYNNQRPKSWQLDSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALRNQQSFSTWSPPTSATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPWGKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQLEEYNRNNVHYRNQEQQQRSNNGSPSNHQEVETSEFVQITDGDELEHWMNGMIDDSPPSLFYGESPFGRPEF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo06220.1	Spo06220.1	mRNA

Homology

[Close]

BLAST of Spo06220.1 vs. NCBI nr
Match: gi|902233187|gb|KNA22948.1| (hypothetical protein SOVF_028240 [Spinacia oleracea])

HSP 1 Score: 492.7 bits (1267), Expect = 3.900e-136
Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 1


		  
Query: 1   MEAGNYFYNNQRPKSWQLDSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALR 60
           MEAGNYFYNNQRPKSWQLDSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALR
Sbjct: 1   MEAGNYFYNNQRPKSWQLDSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALR 60

Query: 61  NQQSFSTWSPPTSATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPW 120
           NQQSFSTWSPPTSATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPW
Sbjct: 61  NQQSFSTWSPPTSATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPW 120

Query: 121 GKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQLEEYN 180
           GKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQLEEYN
Sbjct: 121 GKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQLEEYN 180

Query: 181 RNNVHYRNQEQQQRSNNGSPSNHQEVETSEFVQITDGDELEHWMNGMIDDSPPSLFYGES 240
           RNNVHYRNQEQQQRSNNGSPSNHQEVETSEFVQITDGDELEHWMNGMIDDS PSLFYGES
Sbjct: 181 RNNVHYRNQEQQQRSNNGSPSNHQEVETSEFVQITDGDELEHWMNGMIDDSLPSLFYGES 240

Query: 241 PFGRPEF 248
           PFGRPEF
Sbjct: 241 PFGRPEF 247

[Close]

BLAST of Spo06220.1 vs. NCBI nr
Match: gi|731373343|ref|XP_010666622.1| (PREDICTED: ethylene-responsive transcription factor ERF098-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 270.0 bits (689), Expect = 4.100e-69
Identity = 153/237 (64.56%), Postives = 182/237 (76.79%), Query Frame = 1


		  
Query: 15  SWQL-DSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALRNQQSFSTWSPPTS 74
           +WQL + +QEM+IMVSAL  VISG   G   Q PP+DGSHLV + L++ Q  +TWSPP+ 
Sbjct: 6   NWQLLNPEQEMNIMVSALQHVISG---GSNNQRPPDDGSHLVTQTLQHNQVSTTWSPPSF 65

Query: 75  ATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPWGKWASEIRDPHRA 134
           ATS   P NSQIE+     S+SSNN GKQR +RY+RNKYRGVRQRPWGKWASEIRDPHRA
Sbjct: 66  ATSESPPTNSQIES-----SNSSNNVGKQR-KRYSRNKYRGVRQRPWGKWASEIRDPHRA 125

Query: 135 VRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQLEEYNRNNVHYRNQEQ-- 194
            R+WLGTFETAE+AAR YDRAAVRFRGPRAKLNF +SDYLPQLEEYN  + HYRN++Q  
Sbjct: 126 ARVWLGTFETAEDAAREYDRAAVRFRGPRAKLNFCLSDYLPQLEEYNNFHNHYRNKQQTI 185

Query: 195 -QQRSNNGSPSN----HQEVETSEFVQITDGDELEHWMNGMIDDSPP-SLFYGESPF 243
            Q  +NN + +N    +Q  ETS+FVQITD +ELEHW+NG+IDD P   + YG S F
Sbjct: 186 NQTNNNNNNNNNVIGTNQVPETSDFVQITDSEELEHWVNGLIDDIPSWDIPYGISRF 233

[Close]

BLAST of Spo06220.1 vs. NCBI nr
Match: gi|731373420|ref|XP_010666641.1| (PREDICTED: ethylene-responsive transcription factor ERF109-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 225.7 bits (574), Expect = 8.800e-56
Identity = 125/235 (53.19%), Postives = 157/235 (66.81%), Query Frame = 1


		  
Query: 11  QRPKSWQLDSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALRNQQSFSTWSP 70
           +RP+ W L   QEM+IMV+AL  VISG            DGS  V EA+RN Q  ST SP
Sbjct: 7   ERPERWPLSFDQEMNIMVTALKHVISGIKA-----RDDLDGSQFVEEAIRNNQRLSTCSP 66

Query: 71  PTSATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPWGKWASEIRDP 130
             SAT+   PPN +  N       SS N+GK+R R+Y +NKYRGVRQRPWGKWA+EIRDP
Sbjct: 67  SCSATTPILPPNYENTN-------SSINNGKKRKRKYKKNKYRGVRQRPWGKWAAEIRDP 126

Query: 131 HRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQLEEYNRNNVH-YRNQ 190
           HRAVR+WLGTF TAE+AA+ YDRAA+RFRGP AKLNFS+S+YLPQ+++  + + H Y + 
Sbjct: 127 HRAVRVWLGTFHTAEDAAKEYDRAAIRFRGPHAKLNFSLSNYLPQIQDQQKQDNHNYVDN 186

Query: 191 EQQQRSNNGSPSNHQEVETSEFVQITDGDELEHWMNGMIDDSPPSLFYGESPFGR 245
            QQQ+         Q +    FVQITDG+EL+HW+N +ID++ P     E PF R
Sbjct: 187 HQQQQ------EQQQSINEQSFVQITDGEELDHWVNALIDNTLPQFLQEEPPFRR 223

[Close]

BLAST of Spo06220.1 vs. NCBI nr
Match: gi|731373417|ref|XP_010666640.1| (PREDICTED: ethylene-responsive transcription factor ERF109-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 211.8 bits (538), Expect = 1.300e-51
Identity = 130/252 (51.59%), Postives = 157/252 (62.30%), Query Frame = 1


		  
Query: 11  QRPKSWQLDSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALRNQQSFSTWSP 70
           ++P  W L S QEM+IMV+AL  VISG+         P DGS  V EA++N Q+ ST SP
Sbjct: 7   EKPDCWPLSSDQEMNIMVTALKHVISGD---------PFDGSQFVEEAIKNYQNLSTCSP 66

Query: 71  PTSATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPWGKWASEIRDP 130
              AT+   PPN +     T T+ S N     + R+Y ++ YRGVRQRP GKWA+EIRDP
Sbjct: 67  LAPATTPILPPNYE----NTNTAPSING----KKRKYKKSIYRGVRQRPSGKWAAEIRDP 126

Query: 131 HRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQLEEY----------- 190
           HRAVR+WLGTF TAE+AAR YDRAAVRFRGP AKLNF +S+YLPQ++E            
Sbjct: 127 HRAVRVWLGTFHTAEDAAREYDRAAVRFRGPDAKLNFPISNYLPQMQEQQKQNNEHQDNQ 186

Query: 191 ----NRNNVHY-RNQEQQQRSNNGSPSN--HQEVETSEFVQITDGDELEHWMNGMIDDSP 245
               N NN HY  NQEQQ   N  +  N      E   FVQITDG+EL+HW+N +IDDS 
Sbjct: 187 EVDNNNNNHHYIDNQEQQHSINEVNNDNLISANQEPQSFVQITDGEELDHWVNALIDDSL 241

[Close]

BLAST of Spo06220.1 vs. NCBI nr
Match: gi|731373414|ref|XP_010666639.1| (PREDICTED: ethylene-responsive transcription factor ERF109-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 172.2 bits (435), Expect = 1.200e-39
Identity = 94/141 (66.67%), Postives = 110/141 (78.01%), Query Frame = 1


		  
Query: 97  NNSGKQRTRRYNRNKYRGVRQRPWGKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAV 156
           +N+G+QR  RYNRN+YRGVRQRPWGKWA+EIRDPHRAVR+WLGTF+TAE+AA  YDRAAV
Sbjct: 8   SNNGRQR--RYNRNRYRGVRQRPWGKWAAEIRDPHRAVRVWLGTFDTAEDAAIEYDRAAV 67

Query: 157 RFRGPRAKLNFSVSDYLPQLEEYNRNNVHYRNQEQQQRSNNGSPSNHQEVETSEFVQITD 216
           RFRGPRAKLNF++ DYLPQLEEYN N   + NQ++Q    N      QE+ETS FV   D
Sbjct: 68  RFRGPRAKLNFTLGDYLPQLEEYNNN---HNNQDRQMIVIN------QELETSSFV---D 127

Query: 217 GDELEHWMNGMIDDSPPSLFY 238
             ELE W+N MIDD+P S  Y
Sbjct: 128 EQELEDWVNDMIDDAPLSFRY 134

[Close]

BLAST of Spo06220.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RU15_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_028240 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 2.700e-136
Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 1


		  
Query: 1   MEAGNYFYNNQRPKSWQLDSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALR 60
           MEAGNYFYNNQRPKSWQLDSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALR
Sbjct: 1   MEAGNYFYNNQRPKSWQLDSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALR 60

Query: 61  NQQSFSTWSPPTSATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPW 120
           NQQSFSTWSPPTSATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPW
Sbjct: 61  NQQSFSTWSPPTSATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPW 120

Query: 121 GKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQLEEYN 180
           GKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQLEEYN
Sbjct: 121 GKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQLEEYN 180

Query: 181 RNNVHYRNQEQQQRSNNGSPSNHQEVETSEFVQITDGDELEHWMNGMIDDSPPSLFYGES 240
           RNNVHYRNQEQQQRSNNGSPSNHQEVETSEFVQITDGDELEHWMNGMIDDS PSLFYGES
Sbjct: 181 RNNVHYRNQEQQQRSNNGSPSNHQEVETSEFVQITDGDELEHWMNGMIDDSLPSLFYGES 240

Query: 241 PFGRPEF 248
           PFGRPEF
Sbjct: 241 PFGRPEF 247

[Close]

BLAST of Spo06220.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B851_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_003330 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.800e-69
Identity = 153/237 (64.56%), Postives = 182/237 (76.79%), Query Frame = 1


		  
Query: 15  SWQL-DSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALRNQQSFSTWSPPTS 74
           +WQL + +QEM+IMVSAL  VISG   G   Q PP+DGSHLV + L++ Q  +TWSPP+ 
Sbjct: 6   NWQLLNPEQEMNIMVSALQHVISG---GSNNQRPPDDGSHLVTQTLQHNQVSTTWSPPSF 65

Query: 75  ATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPWGKWASEIRDPHRA 134
           ATS   P NSQIE+     S+SSNN GKQR +RY+RNKYRGVRQRPWGKWASEIRDPHRA
Sbjct: 66  ATSESPPTNSQIES-----SNSSNNVGKQR-KRYSRNKYRGVRQRPWGKWASEIRDPHRA 125

Query: 135 VRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQLEEYNRNNVHYRNQEQ-- 194
            R+WLGTFETAE+AAR YDRAAVRFRGPRAKLNF +SDYLPQLEEYN  + HYRN++Q  
Sbjct: 126 ARVWLGTFETAEDAAREYDRAAVRFRGPRAKLNFCLSDYLPQLEEYNNFHNHYRNKQQTI 185

Query: 195 -QQRSNNGSPSN----HQEVETSEFVQITDGDELEHWMNGMIDDSPP-SLFYGESPF 243
            Q  +NN + +N    +Q  ETS+FVQITD +ELEHW+NG+IDD P   + YG S F
Sbjct: 186 NQTNNNNNNNNNVIGTNQVPETSDFVQITDSEELEHWVNGLIDDIPSWDIPYGISRF 233

[Close]

BLAST of Spo06220.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B4S4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_003320 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.100e-56
Identity = 125/235 (53.19%), Postives = 157/235 (66.81%), Query Frame = 1


		  
Query: 11  QRPKSWQLDSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALRNQQSFSTWSP 70
           +RP+ W L   QEM+IMV+AL  VISG            DGS  V EA+RN Q  ST SP
Sbjct: 7   ERPERWPLSFDQEMNIMVTALKHVISGIKA-----RDDLDGSQFVEEAIRNNQRLSTCSP 66

Query: 71  PTSATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPWGKWASEIRDP 130
             SAT+   PPN +  N       SS N+GK+R R+Y +NKYRGVRQRPWGKWA+EIRDP
Sbjct: 67  SCSATTPILPPNYENTN-------SSINNGKKRKRKYKKNKYRGVRQRPWGKWAAEIRDP 126

Query: 131 HRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQLEEYNRNNVH-YRNQ 190
           HRAVR+WLGTF TAE+AA+ YDRAA+RFRGP AKLNFS+S+YLPQ+++  + + H Y + 
Sbjct: 127 HRAVRVWLGTFHTAEDAAKEYDRAAIRFRGPHAKLNFSLSNYLPQIQDQQKQDNHNYVDN 186

Query: 191 EQQQRSNNGSPSNHQEVETSEFVQITDGDELEHWMNGMIDDSPPSLFYGESPFGR 245
            QQQ+         Q +    FVQITDG+EL+HW+N +ID++ P     E PF R
Sbjct: 187 HQQQQ------EQQQSINEQSFVQITDGEELDHWVNALIDNTLPQFLQEEPPFRR 223

[Close]

BLAST of Spo06220.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DYL2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_003310 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 9.200e-52
Identity = 130/252 (51.59%), Postives = 157/252 (62.30%), Query Frame = 1


		  
Query: 11  QRPKSWQLDSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALRNQQSFSTWSP 70
           ++P  W L S QEM+IMV+AL  VISG+         P DGS  V EA++N Q+ ST SP
Sbjct: 7   EKPDCWPLSSDQEMNIMVTALKHVISGD---------PFDGSQFVEEAIKNYQNLSTCSP 66

Query: 71  PTSATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPWGKWASEIRDP 130
              AT+   PPN +     T T+ S N     + R+Y ++ YRGVRQRP GKWA+EIRDP
Sbjct: 67  LAPATTPILPPNYE----NTNTAPSING----KKRKYKKSIYRGVRQRPSGKWAAEIRDP 126

Query: 131 HRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQLEEY----------- 190
           HRAVR+WLGTF TAE+AAR YDRAAVRFRGP AKLNF +S+YLPQ++E            
Sbjct: 127 HRAVRVWLGTFHTAEDAAREYDRAAVRFRGPDAKLNFPISNYLPQMQEQQKQNNEHQDNQ 186

Query: 191 ----NRNNVHY-RNQEQQQRSNNGSPSN--HQEVETSEFVQITDGDELEHWMNGMIDDSP 245
               N NN HY  NQEQQ   N  +  N      E   FVQITDG+EL+HW+N +IDDS 
Sbjct: 187 EVDNNNNNHHYIDNQEQQHSINEVNNDNLISANQEPQSFVQITDGEELDHWVNALIDDSL 241

[Close]

BLAST of Spo06220.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B457_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_003300 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 8.000e-40
Identity = 94/141 (66.67%), Postives = 110/141 (78.01%), Query Frame = 1


		  
Query: 97  NNSGKQRTRRYNRNKYRGVRQRPWGKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAV 156
           +N+G+QR  RYNRN+YRGVRQRPWGKWA+EIRDPHRAVR+WLGTF+TAE+AA  YDRAAV
Sbjct: 8   SNNGRQR--RYNRNRYRGVRQRPWGKWAAEIRDPHRAVRVWLGTFDTAEDAAIEYDRAAV 67

Query: 157 RFRGPRAKLNFSVSDYLPQLEEYNRNNVHYRNQEQQQRSNNGSPSNHQEVETSEFVQITD 216
           RFRGPRAKLNF++ DYLPQLEEYN N   + NQ++Q    N      QE+ETS FV   D
Sbjct: 68  RFRGPRAKLNFTLGDYLPQLEEYNNN---HNNQDRQMIVIN------QELETSSFV---D 127

Query: 217 GDELEHWMNGMIDDSPPSLFY 238
             ELE W+N MIDD+P S  Y
Sbjct: 128 EQELEDWVNDMIDDAPLSFRY 134

[Close]

BLAST of Spo06220.1 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.300e-24
Identity = 94/232 (40.52%), Postives = 119/232 (51.29%), Query Frame = 1


		  
Query: 17  QLDSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALRNQQSFSTWSPPTSATS 76
           QL  +QE+S++VSAL  VISG       Q    D +  V  A   +    T         
Sbjct: 23  QLSPEQELSVIVSALQHVISGENETAPCQGFSSDST--VISAGMPRLDSDTCQVCRIEGC 82

Query: 77  SG----FPPNSQIEN---AETTTSSSSNN-------------SGKQRTRRYNRNKYRGVR 136
            G    F PN +IE     E   +SSSN               GK R R+  +N YRGVR
Sbjct: 83  LGCNYFFAPNQRIEKNHQQEEEITSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVR 142

Query: 137 QRPWGKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQL 196
           QRPWGK+A+EIRDP RA R+WLGTFETAE+AARAYDRAA+ FRGPRAKLNF   DY   +
Sbjct: 143 QRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSV 202

Query: 197 EEYNRNNVHYRNQEQQQRSNNGSPSNHQEVETSEFVQITDGDELEHWMNGMI 229
                ++    +    + S + S S    VE  ++        +E WMN M+
Sbjct: 203 -----SSPVAADDIGAKASASASVSATDSVEAEQWNGGGGDCNMEEWMNMMM 247

[Close]

BLAST of Spo06220.1 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.800e-23
Identity = 92/231 (39.83%), Postives = 118/231 (51.08%), Query Frame = 1


		  
Query: 21  QQEMSIMVSALNQVISGN-------GGGGGGQ---------------EPPEDGSHLVYEA 80
           + EMS +VSAL  V++GN       GG G G+               E  E G+  V  A
Sbjct: 70  EMEMSAIVSALTHVVAGNVPQHQQGGGEGSGEGTSNSSSSSGQKRRREVEEGGAKAVKAA 129

Query: 81  --LRNQQSFSTWSPPT-----SATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNK 140
             L   Q FS  S  +     S+  SG  P  +     T +S +S+ SG Q  RR     
Sbjct: 130 NTLTVDQYFSGGSSTSKVREASSNMSGPGPTYEYTTTATASSETSSFSGDQPRRR----- 189

Query: 141 YRGVRQRPWGKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSD 200
           YRGVRQRPWGKWA+EIRDP +A R+WLGTF+ AE AARAYD AA+RFRG +AKLNF  + 
Sbjct: 190 YRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENV 249

Query: 201 YLPQLEEYNRNNVHY-RNQEQQQRSNNGS--------PSNHQEVETSEFVQ 214
            L +        VH    Q   Q  N+GS        P+++Q V +   +Q
Sbjct: 250 KLVRPASTEAQPVHQTAAQRPTQSRNSGSTTTLLPIRPASNQSVHSQPLMQ 295

[Close]

BLAST of Spo06220.1 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 2.900e-22
Identity = 64/145 (44.14%), Postives = 90/145 (62.07%), Query Frame = 1


		  
Query: 24  MSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALRNQQSFSTWSPPTSATSSGFPPN- 83
           MS MVSAL QV+S         +   +G+H    +  +++ +          S+  P + 
Sbjct: 1   MSAMVSALTQVVSARS------QTEAEGAHSSSSSAGHKRGW------LGIDSAPIPSSF 60

Query: 84  SQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPWGKWASEIRDPHRAVRMWLGTFE 143
           ++++++      S + +  +  R   R +YRGVRQRPWGKWA+EIRDPHRA R+WLGTF+
Sbjct: 61  ARVDSSHNPIEESMSKAFPEEAREKKR-RYRGVRQRPWGKWAAEIRDPHRAARVWLGTFD 120

Query: 144 TAEEAARAYDRAAVRFRGPRAKLNF 168
           TAE AARAYD AA+RFRG +AKLNF
Sbjct: 121 TAEAAARAYDEAALRFRGNKAKLNF 132

[Close]

BLAST of Spo06220.1 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 1.100e-21
Identity = 65/141 (46.10%), Postives = 79/141 (56.03%), Query Frame = 1


		  
Query: 27  MVSALNQVISGNGGGGGGQEPPEDGSHLVYEALRNQQSFSTWSPPTSATSSGFPPNSQIE 86
           MVS L  V+SG       +  P   +       R ++ FS             PP   I 
Sbjct: 1   MVSMLTNVVSG-------ETEPSASATWTMGHKREREEFS------------LPPQPLIT 60

Query: 87  NAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPWGKWASEIRDPHRAVRMWLGTFETAEE 146
            +  T    S+ S ++        KYRGVRQRPWGKWA+EIRDPH+A R+WLGTFETAE 
Sbjct: 61  GSAVTKECESSMSLERP------KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEA 116

Query: 147 AARAYDRAAVRFRGPRAKLNF 168
           AARAYD AA+RFRG +AKLNF
Sbjct: 121 AARAYDAAALRFRGSKAKLNF 116

[Close]

BLAST of Spo06220.1 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 9.200e-21
Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 1


		  
Query: 109 RNKYRGVRQRPWGKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNF 168
           R  YRGVRQRPWGKWA+EIRDP +A R+WLGTFETAEEAA AYDRAA++F+G +AKLNF
Sbjct: 36  RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNF 94

[Close]

BLAST of Spo06220.1 vs. TAIR (Arabidopsis)
Match: AT4G34410.1 (redox responsive transcription factor 1)

HSP 1 Score: 114.0 bits (284), Expect = 1.300e-25
Identity = 94/232 (40.52%), Postives = 119/232 (51.29%), Query Frame = 1


		  
Query: 17  QLDSQQEMSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALRNQQSFSTWSPPTSATS 76
           QL  +QE+S++VSAL  VISG       Q    D +  V  A   +    T         
Sbjct: 23  QLSPEQELSVIVSALQHVISGENETAPCQGFSSDST--VISAGMPRLDSDTCQVCRIEGC 82

Query: 77  SG----FPPNSQIEN---AETTTSSSSNN-------------SGKQRTRRYNRNKYRGVR 136
            G    F PN +IE     E   +SSSN               GK R R+  +N YRGVR
Sbjct: 83  LGCNYFFAPNQRIEKNHQQEEEITSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVR 142

Query: 137 QRPWGKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSDYLPQL 196
           QRPWGK+A+EIRDP RA R+WLGTFETAE+AARAYDRAA+ FRGPRAKLNF   DY   +
Sbjct: 143 QRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSV 202

Query: 197 EEYNRNNVHYRNQEQQQRSNNGSPSNHQEVETSEFVQITDGDELEHWMNGMI 229
                ++    +    + S + S S    VE  ++        +E WMN M+
Sbjct: 203 -----SSPVAADDIGAKASASASVSATDSVEAEQWNGGGGDCNMEEWMNMMM 247

[Close]

BLAST of Spo06220.1 vs. TAIR (Arabidopsis)
Match: AT5G64750.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 3.200e-24
Identity = 92/231 (39.83%), Postives = 118/231 (51.08%), Query Frame = 1


		  
Query: 21  QQEMSIMVSALNQVISGN-------GGGGGGQ---------------EPPEDGSHLVYEA 80
           + EMS +VSAL  V++GN       GG G G+               E  E G+  V  A
Sbjct: 70  EMEMSAIVSALTHVVAGNVPQHQQGGGEGSGEGTSNSSSSSGQKRRREVEEGGAKAVKAA 129

Query: 81  --LRNQQSFSTWSPPT-----SATSSGFPPNSQIENAETTTSSSSNNSGKQRTRRYNRNK 140
             L   Q FS  S  +     S+  SG  P  +     T +S +S+ SG Q  RR     
Sbjct: 130 NTLTVDQYFSGGSSTSKVREASSNMSGPGPTYEYTTTATASSETSSFSGDQPRRR----- 189

Query: 141 YRGVRQRPWGKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNFSVSD 200
           YRGVRQRPWGKWA+EIRDP +A R+WLGTF+ AE AARAYD AA+RFRG +AKLNF  + 
Sbjct: 190 YRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENV 249

Query: 201 YLPQLEEYNRNNVHY-RNQEQQQRSNNGS--------PSNHQEVETSEFVQ 214
            L +        VH    Q   Q  N+GS        P+++Q V +   +Q
Sbjct: 250 KLVRPASTEAQPVHQTAAQRPTQSRNSGSTTTLLPIRPASNQSVHSQPLMQ 295

[Close]

BLAST of Spo06220.1 vs. TAIR (Arabidopsis)
Match: AT5G50080.1 (ethylene response factor 110)

HSP 1 Score: 107.1 bits (266), Expect = 1.600e-23
Identity = 64/145 (44.14%), Postives = 90/145 (62.07%), Query Frame = 1


		  
Query: 24  MSIMVSALNQVISGNGGGGGGQEPPEDGSHLVYEALRNQQSFSTWSPPTSATSSGFPPN- 83
           MS MVSAL QV+S         +   +G+H    +  +++ +          S+  P + 
Sbjct: 1   MSAMVSALTQVVSARS------QTEAEGAHSSSSSAGHKRGW------LGIDSAPIPSSF 60

Query: 84  SQIENAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPWGKWASEIRDPHRAVRMWLGTFE 143
           ++++++      S + +  +  R   R +YRGVRQRPWGKWA+EIRDPHRA R+WLGTF+
Sbjct: 61  ARVDSSHNPIEESMSKAFPEEAREKKR-RYRGVRQRPWGKWAAEIRDPHRAARVWLGTFD 120

Query: 144 TAEEAARAYDRAAVRFRGPRAKLNF 168
           TAE AARAYD AA+RFRG +AKLNF
Sbjct: 121 TAEAAARAYDEAALRFRGNKAKLNF 132

[Close]

BLAST of Spo06220.1 vs. TAIR (Arabidopsis)
Match: AT1G43160.1 (related to AP2 6)

HSP 1 Score: 105.1 bits (261), Expect = 6.100e-23
Identity = 65/141 (46.10%), Postives = 79/141 (56.03%), Query Frame = 1


		  
Query: 27  MVSALNQVISGNGGGGGGQEPPEDGSHLVYEALRNQQSFSTWSPPTSATSSGFPPNSQIE 86
           MVS L  V+SG       +  P   +       R ++ FS             PP   I 
Sbjct: 1   MVSMLTNVVSG-------ETEPSASATWTMGHKREREEFS------------LPPQPLIT 60

Query: 87  NAETTTSSSSNNSGKQRTRRYNRNKYRGVRQRPWGKWASEIRDPHRAVRMWLGTFETAEE 146
            +  T    S+ S ++        KYRGVRQRPWGKWA+EIRDPH+A R+WLGTFETAE 
Sbjct: 61  GSAVTKECESSMSLERP------KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEA 116

Query: 147 AARAYDRAAVRFRGPRAKLNF 168
           AARAYD AA+RFRG +AKLNF
Sbjct: 121 AARAYDAAALRFRGSKAKLNF 116

[Close]

BLAST of Spo06220.1 vs. TAIR (Arabidopsis)
Match: AT5G13330.1 (related to AP2 6l)

HSP 1 Score: 102.1 bits (253), Expect = 5.200e-22
Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 1


		  
Query: 109 RNKYRGVRQRPWGKWASEIRDPHRAVRMWLGTFETAEEAARAYDRAAVRFRGPRAKLNF 168
           R  YRGVRQRPWGKWA+EIRDP +A R+WLGTFETAEEAA AYDRAA++F+G +AKLNF
Sbjct: 36  RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNF 94

The following BLAST results are available for this feature:

BLAST of Spo06220.1 vs. NCBI nr
BLAST of Spo06220.1 vs. UniProtKB/TrEMBL
BLAST of Spo06220.1 vs. ExPASy Swiss-Prot
BLAST of Spo06220.1 vs. TAIR (Arabidopsis)

BLAST of Spo06220.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902233187\|gb\|KNA22948.1\|	3.9e-136	99.6	hypothetical protein SOVF_0282...	[more]
gi\|731373343\|ref\|XP_010666622.1\|	4.1e-69	64.5	PREDICTED: ethylene-responsive...	[more]
gi\|731373420\|ref\|XP_010666641.1\|	8.8e-56	53.1	PREDICTED: ethylene-responsive...	[more]
gi\|731373417\|ref\|XP_010666640.1\|	1.3e-51	51.5	PREDICTED: ethylene-responsive...	[more]
gi\|731373414\|ref\|XP_010666639.1\|	1.2e-39	66.6	PREDICTED: ethylene-responsive...	[more]

BLAST of Spo06220.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RU15_SPIOL	2.7e-136	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8B851_BETVU	2.8e-69	64.5	Uncharacterized protein OS=Bet...	[more]
A0A0J8B4S4_BETVU	6.1e-56	53.1	Uncharacterized protein OS=Bet...	[more]
A0A0J8DYL2_BETVU	9.2e-52	51.5	Uncharacterized protein OS=Bet...	[more]
A0A0J8B457_BETVU	8.0e-40	66.6	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo06220.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
EF109_ARATH	2.3e-24	40.5	Ethylene-responsive transcript...	[more]
ABR1_ARATH	5.8e-23	39.8	Ethylene-responsive transcript...	[more]
EF110_ARATH	2.9e-22	44.1	Ethylene-responsive transcript...	[more]
RAP26_ARATH	1.1e-21	46.1	Ethylene-responsive transcript...	[more]
EF113_ARATH	9.2e-21	77.9	Ethylene-responsive transcript...	[more]

BLAST of Spo06220.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G34410.1	1.3e-25	40.5	redox responsive transcription...	[more]
AT5G64750.1	3.2e-24	39.8	Integrase-type DNA-binding sup...	[more]
AT5G50080.1	1.6e-23	44.1	ethylene response factor 110	[more]
AT1G43160.1	6.1e-23	46.1	related to AP2 6	[more]
AT5G13330.1	5.2e-22	77.9	related to AP2 6l	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 134..150 score: 5.9E-12coord: 112..123 score: 5.9
IPR001471	AP2/ERF domain	GENE3D	3.30.730.10		coord: 111..168 score: 2.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 111..160 score: 5.0
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 111..174 score: 1.3
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 111..168 score: 24
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 111..170 score: 1.5
None	No IPR available	unknown	Coil	Coil	coord: 176..196 scor
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 67..178 score: 3.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006508	proteolysis
biological_process	GO:0006073	cellular glucan metabolic process
biological_process	GO:0071555	cell wall organization
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005618	cell wall
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0016762	xyloglucan:xyloglucosyl transferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo09635	0.69	Barchart \| Table
Spo17725	0.68	Barchart \| Table
Spo00611	0.67	Barchart \| Table
Spo05464	0.66	Barchart \| Table
Spo02824	0.66	Barchart \| Table
Spo19888	0.65	Barchart \| Table
Spo21785	0.65	Barchart \| Table
Spo25831	0.65	Barchart \| Table