Spo06255 (gene)

Overview
NameSpo06255
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionEarly nodulin-55-2 (N-55-2) (Nodulin-315) (Precursor)
LocationSpoScf_03781 : 13997 .. 17676 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCAAAAGTAACGTCAAAAATTTGATCACTAGTTCACTACAACAGCAAATGTAATAATCCCTTTGTTGCAAAGCAAAGCAAAGCAAAGGTCAATATAAGCCACCTACATTTAACTTGATAGTAACGCTAACTTTTTCGAGTTTTTGTACGTTATATATGAAGCAATATAATCAGCTTATTAGAAGAGCTAGATCTAGTTTTATTGAACATATACAACGTACGTACAAGAATCGTCGAAAATGGGAGAATTGAAGAGAATGTCGATGATGGTGGCGTTGGTTTTTGTGGTTTTGATTACTGAACAAGTTTGTGCAACACAACATATTGTGGGTGGAAGTGGTGGTTGGGATGAGTCTACAGATTATGATTCATGGGCTAAAGGACAGACTTTTAAAGTTGGTGATACACTTGGTAAGTTCGATAATACGTACTACATACTCTCTTCGTTCTTGTTTAATTTTTTATTTTTAAACGAATTTACTTTTTATCTATTCATTTCTTTTGTTTGAATAACATTTGTTTCAAGGATTTCTTAGTTGTTGTGTTATAGTTGGGTTTCATTCTTTTAGGCTTGAGGCAACCCTTCCTAGAAGGTGGGTCTCTCCCTCAGGGATGTTTCTTCTGTTTTTTTCAGTCTGTTTTTTGGACATTGAGCAATTTATTATTTACTCTTGCCTACCAAAAAAAAAAAAAAAAAACATTTGTTTCAAGAACATGGGAATTCACTTTTTACCACGATCATATCCTCTCAAATAAAATTACATACAACGCGTCTCCTGTGAGACCAGTCACACCATCAACTTGAATGTGTGACGAGCGCGAAACCAATAGCGTACCTCCCCTAAAACTATATAAAAAAAAAGTAACAGATCTAAACTATAGAAGTAACATACCTAAACTAAAAAAAAGTACCTCCTCTAAAATTATATAAAAAAAAAAGTAACATGTCTAAACTATAGAAGTATCATACCTAAACTAAAAATGTACCTCCCCTAAAACTATTCCGTATAAAAAAAAAGTAACATGTCTAAACTATAGAAATAACATACCTAAACTAAAAAAGTACCTCATCTAAAATTATAAAAAAAAAGTAACATGTCTAAATTATAGAAGTAACATACCTAAACTAAAAAAAATACCTCCTCTAAAATTATCAAAAAAAAAGTAACATGTCTAAACTATAGAAGTAACCTACCTAAACTAAGAAGGTATCTCCCCTAAAACTACTCCGTATAAAAAAAGTAACATGTATAAACTATAGAAGTAACATACCTAAACTAAAAAAAGTACTTCCTCTAAAATTATAATATAAAAAAAAAGTAACTTGTCTAAACTATAGAAGTAACATACCTAAACTAAGAAGGTATCTCCCCTAAAACTACTCCGTGTAAAAAAAGTAACATGTATAAACTATAGAAGTAACATAACTAAACTAAAAAAGGTACCTCCTCTAAAATTATAAAATAAAAAAAAAGTAACATGTCTAAACTATAGAAGTAACATACCTAAATTCGCAAGTGTGAACTGGTCTCACCATCAGTTGATGGTGAGAACAGTCTCATATAAGAATTTGAAAATTACATAAACTATTTCATGTAGATACCGAATTAGGAAAAATCACACTTACTAAAAAAAGTGTTGATAATCTATGTTTACAGTACATATGCAGTGTTCAAGAAAGTATTTTTGCGAAAATATAGTGTGTAATTAAGTACATATACTAAAGTGAAGTAGTTTTTGAGGAAATATTCCAAAAATGTCGCAGATGGAATTTGATCCTAGATCTTAGATAGTACCACATTCTTAAGATTTTACCAACTTATCTAGGTGGTATACACCCCTAAAAACGTTTATGACGATTGTATATCTTTTGTTTCAATAATTGAAAATTGAATATCTTTTATATAATTGTTTTTGTTTCTAGTCTTTTATTTTTTTTTCTTTTTAATTTTTGAAGGAAGTAGGAAAATTATCATTAATAATCCGTCATACAACATCTACAATAATAATTAGCCCTAAATAATATTATAACATCAATATTAAATTATTCATCCAGGTTATTAGTATATACGAACGCGCGCTTCAAAACCGCTTATTTGATGTGGTAGTATTCCAATCATAATTAATTCTGAATGACTTGACATCTTTAATGCCTAATGTAATTAGCAGTTGAAATCTGATCTTCATCTTACGTTCTTGATCACATGAGTTAGATTAAAGCTAGTTCGCGCCTCAGAAAAATGTTCAACCAATAATATTCTTCCCTCATACACACTAGCTATATTTACGAAATAACCTAAGAAAAAGTTCCTCAAAGTAAAAGATCGAAAAGCCTTGTCTTTCATGGGAGAAAAGTTCATCGCATAAAGAGTAAGTATTATTATAATCTAAAAACAAGCATAATCAAAACGAAAAACCAACAAAATACTGAGTAACTAAGATTGAAGTTTTCCACGGATAAAAAATGATATTAAATTCTTCATCCAGCTTACCAGTATAAAAGCTCAGAATCACTTCTTTAACGTGGTAGTGTTCCAACCATGCATTAAACAAATTAAAATATGATATTTATCTTGACGTTCTTGATCTTTAACTAATAAAAAATTTCCCTCATACACAATCGATCTATGAAAATTGTTTCATTGAATTTCTTATATATTTCACTTTTATAGACCTAAGTCATACTTATTATAGTTGTTTGATATCCTGCAATGACAATTTATATTCATGTGTTCTCTGATCATCTAACTTTCACTTATTTATTTTAGTTGTAAATTAAGTTTGAGGGGTTATTAATTATTAATTATGTAATGTTAAATTTATTTTACTTATTTTAATTTTAATTATATATTAAGTATTTTTTTTTTATGTTGTATATAAGTGAAAATAAGGCGATTATAAAAAAGAAATCGTAATGAATATATTTTTGTTGTAGTATTTAAATACACTCCTGGACTACATAGTGTGGTGGAGGTTGGTAGTGAAAGTGATTACAAAAAGTGTGACACTAGCAACGCGGCCAACTCGATGAATGGGGGTAATGATGTTGTGAAGTTAGACAAAGTTGGCTCTCGATATTTTGCTTGTGGAACTTCAGGTCATTGTAGTGCAGGAATGAAGCTCAAGGTCGACGTTGTTGGCGCAACAGGATCATCATCACCTTCTTCCTCATCCTCATCTTCGAATACTGATGTGTCTAGTGCTGATCAAACTCACCTTCATTGCTTCCCATTAATGGCATCAGTTTCTCTAGCCATGGTCATTTTGCCAATGTTTGTGCTATAAACGGGCAGGGTTGTCTTTTTGCGTACGGTTGATATGTATGTAGTCTTCACCTATGTGTGTTTTTCGTGTTACATACCAAGTATACTTATATTTGCTATTGGGTTTCCTAAGTTTTGCTTGTAAATTTGTAATCTTCATATTCTAGGTTTTGAAATTAAATAAATAAATACTATGGAGTATAGGAATAATCAATATACTGTACGTTGTAATAAACTCACTTTAACCAAAATAACAAATAAATTTCTTATATTATATTATAAAATCTTTATAAGGCATTTGGTATGAGGGAAAATGATATGACTACACGAAAGATAAAGGAATGAGTTATACTCCCTCCGTCCCGGAATACTCGCACCGGTTTGACTTTTTGCACTATTCACATAATTCACTTTGAC

mRNA sequence

TCCAAAAGTAACGTCAAAAATTTGATCACTAGTTCACTACAACAGCAAATGTAATAATCCCTTTGTTGCAAAGCAAAGCAAAGCAAAGGTCAATATAAGCCACCTACATTTAACTTGATAGTAACGCTAACTTTTTCGAGTTTTTGTACGTTATATATGAAGCAATATAATCAGCTTATTAGAAGAGCTAGATCTAGTTTTATTGAACATATACAACGTACGTACAAGAATCGTCGAAAATGGGAGAATTGAAGAGAATGTCGATGATGGTGGCGTTGGTTTTTGTGGTTTTGATTACTGAACAAGTTTGTGCAACACAACATATTGTGGGTGGAAGTGGTGGTTGGGATGAGTCTACAGATTATGATTCATGGGCTAAAGGACAGACTTTTAAAGTTGGTGATACACTTGTATTTAAATACACTCCTGGACTACATAGTGTGGTGGAGGTTGGTAGTGAAAGTGATTACAAAAAGTGTGACACTAGCAACGCGGCCAACTCGATGAATGGGGGTAATGATGTTGTGAAGTTAGACAAAGTTGGCTCTCGATATTTTGCTTGTGGAACTTCAGGTCATTGTAGTGCAGGAATGAAGCTCAAGGTCGACGTTGTTGGCGCAACAGGATCATCATCACCTTCTTCCTCATCCTCATCTTCGAATACTGATGTGTCTAGTGCTGATCAAACTCACCTTCATTGCTTCCCATTAATGGCATCAGTTTCTCTAGCCATGGTCATTTTGCCAATGTTTGTGCTATAAACGGGCAGGGTTGTCTTTTTGCGTACGGTTGATATGTATGTAGTCTTCACCTATGTGTGTTTTTCGTGTTACATACCAAGTATACTTATATTTGCTATTGGGTTTCCTAAGTTTTGCTTGTAAATTTGTAATCTTCATATTCTAGGTTTTGAAATTAAATAAATAAATACTATGGAGTATAGGAATAATCAATATACTGTACGTTGTAATAAACTCACTTTAACCAAAATAACAAATAAATTTCTTATATTATATTATAAAATCTTTATAAGGCATTTGGTATGAGGGAAAATGATATGACTACACGAAAGATAAAGGAATGAGTTATACTCCCTCCGTCCCGGAATACTCGCACCGGTTTGACTTTTTGCACTATTCACATAATTCACTTTGAC

Coding sequence (CDS)

ATGGGAGAATTGAAGAGAATGTCGATGATGGTGGCGTTGGTTTTTGTGGTTTTGATTACTGAACAAGTTTGTGCAACACAACATATTGTGGGTGGAAGTGGTGGTTGGGATGAGTCTACAGATTATGATTCATGGGCTAAAGGACAGACTTTTAAAGTTGGTGATACACTTGTATTTAAATACACTCCTGGACTACATAGTGTGGTGGAGGTTGGTAGTGAAAGTGATTACAAAAAGTGTGACACTAGCAACGCGGCCAACTCGATGAATGGGGGTAATGATGTTGTGAAGTTAGACAAAGTTGGCTCTCGATATTTTGCTTGTGGAACTTCAGGTCATTGTAGTGCAGGAATGAAGCTCAAGGTCGACGTTGTTGGCGCAACAGGATCATCATCACCTTCTTCCTCATCCTCATCTTCGAATACTGATGTGTCTAGTGCTGATCAAACTCACCTTCATTGCTTCCCATTAATGGCATCAGTTTCTCTAGCCATGGTCATTTTGCCAATGTTTGTGCTATAA

Protein sequence

MGELKRMSMMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPGLHSVVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKVDVVGATGSSSPSSSSSSSNTDVSSADQTHLHCFPLMASVSLAMVILPMFVL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06255.1Spo06255.1mRNA


Homology
[Close]
BLAST of Spo06255.1 vs. NCBI nr
Match: gi|902219839|gb|KNA18428.1| (hypothetical protein SOVF_070830 [Spinacia oleracea])

HSP 1 Score: 334.0 bits (855), Expect = 1.600e-88
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1 

		  

Query: 1   MGELKRMSMMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFK 60
           MGELKRMSMMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFK
Sbjct: 1   MGELKRMSMMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFK 60

Query: 61  YTPGLHSVVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKL 120
           YTPGLHSVVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKL
Sbjct: 61  YTPGLHSVVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKL 120

Query: 121 KVDVVGATGSSSPSSSSSSSNTDVSSADQTHLHCFPLMASVSLAMVILPMFVL 174
           KVDVVGATGSSSPSSSSSSSNTDVSSADQTHLHCFPLMASVSLAMVILPMFVL
Sbjct: 121 KVDVVGATGSSSPSSSSSSSNTDVSSADQTHLHCFPLMASVSLAMVILPMFVL 173
[Close]
BLAST of Spo06255.1 vs. NCBI nr
Match: gi|731319714|ref|XP_010670421.1| (PREDICTED: basic blue protein-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 223.0 bits (567), Expect = 4.000e-55
Identity = 122/178 (68.54%), Postives = 140/178 (78.65%), Query Frame = 1 

		  

Query: 1   MGELKRMSMMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFK 60
           M  LKR   ++ALV +V IT Q  ATQH+VGGS GWDESTDY+SWAKGQTFKVGDTLVFK
Sbjct: 1   MEGLKRR--LLALVLMVCITTQAYATQHVVGGSDGWDESTDYNSWAKGQTFKVGDTLVFK 60

Query: 61  YTPGLHSVVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKL 120
           YTPGLH+V E+GSES+YK CDTSNAANSM+ GNDVVKLDK GSRYFACGT+GHCSAGMKL
Sbjct: 61  YTPGLHNVAELGSESEYKSCDTSNAANSMSTGNDVVKLDKAGSRYFACGTAGHCSAGMKL 120

Query: 121 KVDVV-------GATGSSSPSSSSSSSNTDVSSADQTHLHCFPLMASVSLAMVILPMF 172
           KVDVV       G++ SS+ S SSSSS +DVSS  Q+ L   P M  ++L + ILP F
Sbjct: 121 KVDVVAGDKQSSGSSSSSTSSPSSSSSTSDVSSTYQSLLRSLPYMVLLALGVAILPFF 176
[Close]
BLAST of Spo06255.1 vs. NCBI nr
Match: gi|743919813|ref|XP_011003937.1| (PREDICTED: mavicyanin [Populus euphratica])

HSP 1 Score: 179.9 bits (455), Expect = 3.900e-42
Identity = 88/145 (60.69%), Postives = 109/145 (75.17%), Query Frame = 1 

		  

Query: 11  VALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPGLHSVVE 70
           + +VFV LIT++  A QH+VGGS GW+ESTD+ SWA GQ FKVGD LVFKYT GLHSVVE
Sbjct: 7   LVMVFVALITKEAMAAQHVVGGSQGWEESTDFSSWASGQKFKVGDQLVFKYTSGLHSVVE 66

Query: 71  VGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKVDVVGATGS 130
           +G ES YK CD   A NSMN GNDVVKL+K G+RYFACGT GHC  GMK+K+ V   T  
Sbjct: 67  LGGESAYKSCDLGTALNSMNTGNDVVKLNKPGTRYFACGTLGHCGQGMKVKITVESGTAP 126

Query: 131 SSPSSSSSSSNTDVSSADQTHLHCF 156
           S+P SSSSSS++  +++  + +H +
Sbjct: 127 STPESSSSSSSSSPAASSASPMHSY 151
[Close]
BLAST of Spo06255.1 vs. NCBI nr
Match: gi|225452130|ref|XP_002262831.1| (PREDICTED: mavicyanin [Vitis vinifera])

HSP 1 Score: 179.5 bits (454), Expect = 5.100e-42
Identity = 101/170 (59.41%), Postives = 118/170 (69.41%), Query Frame = 1 

		  

Query: 9   MMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPGLHSV 68
           ++ ALV V L+T +  ATQH+VGGS GWDES+DY  WA GQTF+VGD LVFKYTPGLHSV
Sbjct: 7   VLSALVVVGLLTNKALATQHVVGGSQGWDESSDYSKWASGQTFEVGDQLVFKYTPGLHSV 66

Query: 69  VEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKVDVVGAT 128
           VE+ +ES YK CD  +A NSMN GN+VVKL K G+RYFACGT GHC  GMKLKV  V A 
Sbjct: 67  VELPNESAYKNCDVGSALNSMNSGNNVVKLSKAGTRYFACGTIGHCDQGMKLKVSTVSAD 126

Query: 129 GSSSP-------SSSSSSSNTDVSSADQTHLHCFPLMASVSLAMVILPMF 172
            SSSP       SSSSSSS T  S+A  +      L  +  LA+ +L MF
Sbjct: 127 ASSSPGSTPPSSSSSSSSSPTSTSAASASFPFASMLPMASLLAISMLSMF 176
[Close]
BLAST of Spo06255.1 vs. NCBI nr
Match: gi|661879608|emb|CDP16681.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 176.8 bits (447), Expect = 3.300e-41
Identity = 92/158 (58.23%), Postives = 118/158 (74.68%), Query Frame = 1 

		  

Query: 10  MVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPGLHSVV 69
           ++ +V + L+ +Q  AT+H VGGS GWDESTD+ SWA GQTFKVGD LVFKYTPGLHSVV
Sbjct: 8   VLVMVILSLVEKQASATKHDVGGSQGWDESTDFSSWASGQTFKVGDQLVFKYTPGLHSVV 67

Query: 70  EVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKV-DVVGAT 129
           E+GSES YK CD S A +S NGGNDVVKL K G+RYFACGT+GHC  GMK+K+  V  AT
Sbjct: 68  ELGSESAYKSCDISTALDSKNGGNDVVKLAKAGTRYFACGTAGHCGQGMKVKITTVAAAT 127

Query: 130 GSSSPSSSSSSSNTDVSSADQTHL---HCFPLMASVSL 164
           G++SP++ SS+S++  S++  +     H  P + + SL
Sbjct: 128 GTASPNTPSSTSSSTASTSPPSSALLQHLLPFILASSL 165
[Close]
BLAST of Spo06255.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RG09_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_070830 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.100e-88
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1 

		  

Query: 1   MGELKRMSMMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFK 60
           MGELKRMSMMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFK
Sbjct: 1   MGELKRMSMMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFK 60

Query: 61  YTPGLHSVVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKL 120
           YTPGLHSVVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKL
Sbjct: 61  YTPGLHSVVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKL 120

Query: 121 KVDVVGATGSSSPSSSSSSSNTDVSSADQTHLHCFPLMASVSLAMVILPMFVL 174
           KVDVVGATGSSSPSSSSSSSNTDVSSADQTHLHCFPLMASVSLAMVILPMFVL
Sbjct: 121 KVDVVGATGSSSPSSSSSSSNTDVSSADQTHLHCFPLMASVSLAMVILPMFVL 173
[Close]
BLAST of Spo06255.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTJ2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g041160 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.800e-55
Identity = 122/178 (68.54%), Postives = 140/178 (78.65%), Query Frame = 1 

		  

Query: 1   MGELKRMSMMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFK 60
           M  LKR   ++ALV +V IT Q  ATQH+VGGS GWDESTDY+SWAKGQTFKVGDTLVFK
Sbjct: 1   MEGLKRR--LLALVLMVCITTQAYATQHVVGGSDGWDESTDYNSWAKGQTFKVGDTLVFK 60

Query: 61  YTPGLHSVVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKL 120
           YTPGLH+V E+GSES+YK CDTSNAANSM+ GNDVVKLDK GSRYFACGT+GHCSAGMKL
Sbjct: 61  YTPGLHNVAELGSESEYKSCDTSNAANSMSTGNDVVKLDKAGSRYFACGTAGHCSAGMKL 120

Query: 121 KVDVV-------GATGSSSPSSSSSSSNTDVSSADQTHLHCFPLMASVSLAMVILPMF 172
           KVDVV       G++ SS+ S SSSSS +DVSS  Q+ L   P M  ++L + ILP F
Sbjct: 121 KVDVVAGDKQSSGSSSSSTSSPSSSSSTSDVSSTYQSLLRSLPYMVLLALGVAILPFF 176
[Close]
BLAST of Spo06255.1 vs. UniProtKB/TrEMBL
Match: D7UBD5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0171g00100 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.500e-42
Identity = 101/170 (59.41%), Postives = 118/170 (69.41%), Query Frame = 1 

		  

Query: 9   MMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPGLHSV 68
           ++ ALV V L+T +  ATQH+VGGS GWDES+DY  WA GQTF+VGD LVFKYTPGLHSV
Sbjct: 7   VLSALVVVGLLTNKALATQHVVGGSQGWDESSDYSKWASGQTFEVGDQLVFKYTPGLHSV 66

Query: 69  VEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKVDVVGAT 128
           VE+ +ES YK CD  +A NSMN GN+VVKL K G+RYFACGT GHC  GMKLKV  V A 
Sbjct: 67  VELPNESAYKNCDVGSALNSMNSGNNVVKLSKAGTRYFACGTIGHCDQGMKLKVSTVSAD 126

Query: 129 GSSSP-------SSSSSSSNTDVSSADQTHLHCFPLMASVSLAMVILPMF 172
            SSSP       SSSSSSS T  S+A  +      L  +  LA+ +L MF
Sbjct: 127 ASSSPGSTPPSSSSSSSSSPTSTSAASASFPFASMLPMASLLAISMLSMF 176
[Close]
BLAST of Spo06255.1 vs. UniProtKB/TrEMBL
Match: A0A068V7U4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019147001 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.300e-41
Identity = 92/158 (58.23%), Postives = 118/158 (74.68%), Query Frame = 1 

		  

Query: 10  MVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPGLHSVV 69
           ++ +V + L+ +Q  AT+H VGGS GWDESTD+ SWA GQTFKVGD LVFKYTPGLHSVV
Sbjct: 8   VLVMVILSLVEKQASATKHDVGGSQGWDESTDFSSWASGQTFKVGDQLVFKYTPGLHSVV 67

Query: 70  EVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKV-DVVGAT 129
           E+GSES YK CD S A +S NGGNDVVKL K G+RYFACGT+GHC  GMK+K+  V  AT
Sbjct: 68  ELGSESAYKSCDISTALDSKNGGNDVVKLAKAGTRYFACGTAGHCGQGMKVKITTVAAAT 127

Query: 130 GSSSPSSSSSSSNTDVSSADQTHL---HCFPLMASVSL 164
           G++SP++ SS+S++  S++  +     H  P + + SL
Sbjct: 128 GTASPNTPSSTSSSTASTSPPSSALLQHLLPFILASSL 165
[Close]
BLAST of Spo06255.1 vs. UniProtKB/TrEMBL
Match: V7CWU5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G095100g PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.700e-41
Identity = 90/161 (55.90%), Postives = 114/161 (70.81%), Query Frame = 1 

		  

Query: 6   RMSMMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPGL 65
           R + +   +FV LIT +  A QH+VGGS GWD ST+++SW  GQTF VGD LVFKY+ GL
Sbjct: 3   RKNTIFLALFVALITNEAMAEQHVVGGSQGWDASTNFNSWVSGQTFNVGDQLVFKYSSGL 62

Query: 66  HSVVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKVDVV 125
           HSVVE+GSES+YK CD  N  NSM+ GNDVVKL+K G+RYFACGT GHC  GMK+K+  V
Sbjct: 63  HSVVELGSESEYKNCDLGNTVNSMSSGNDVVKLNKPGARYFACGTLGHCGQGMKVKITTV 122

Query: 126 GATGSSSPSSSSSSSNTDVSSADQTHLHCFPLMASVSLAMV 167
             T S + SSSSSSS++  SSA Q    CF  +  +  +++
Sbjct: 123 SGTSSPASSSSSSSSSSSSSSASQ----CFSSLVFIFASLI 159
[Close]
BLAST of Spo06255.1 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.800e-21
Identity = 57/127 (44.88%), Postives = 77/127 (60.63%), Query Frame = 1 

		  

Query: 25  ATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPGLHSVVEVGSESDYKKCDTSN 84
           AT + VG + GW    DY +WA  +TF VGD+LVF Y  G H+V EV  ESDYK C + N
Sbjct: 24  ATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEV-KESDYKSCTSGN 83

Query: 85  AANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKVDVVGATGSS-SPSSSSSSSNTD 144
           + ++ + G   + L K G  YF CG  GH + GMKL + V  ++GSS +PS++ SSS   
Sbjct: 84  SISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKASSGSSAAPSATPSSSGKG 143

Query: 145 VSSADQT 151
             S+D T
Sbjct: 144 SPSSDDT 149
[Close]
BLAST of Spo06255.1 vs. ExPASy Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.100e-16
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 1 

		  

Query: 28  HIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPGLHSVVEVGSESDYKKCDTSNAAN 87
           ++VGGSGGW  +T+  SW KG+ F+ GD L+F Y P +H+VV V ++  +  C+T   A 
Sbjct: 3   YVVGGSGGWTFNTE--SWPKGKRFRAGDILLFNYNPXMHNVVVV-NQGGFSTCNTPAGAK 62

Query: 88  SMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKVDVV 126
               G D +KL K G  YF C   GHC +GMK+ V+ +
Sbjct: 63  VYTSGRDQIKLPK-GQSYFICNFPGHCQSGMKIAVNAL 96
[Close]
BLAST of Spo06255.1 vs. ExPASy Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.200e-16
Identity = 55/143 (38.46%), Postives = 73/143 (51.05%), Query Frame = 1 

		  

Query: 8   SMMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPGLHS 67
           ++  AL+  +     V A    VG   GW  + DY  W  G+TF+VGDTL F Y  GL  
Sbjct: 4   TVAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVY--GLSH 63

Query: 68  VVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKVDVVGA 127
            V V  ++ Y  CD+S A  +   G+  + L  VG+ +F C T GHC  GMKL V V+ A
Sbjct: 64  SVSVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAA 123

Query: 128 TGSSSPSSSSSSSNTDVSSADQT 151
             S S  SS  S+ +  SS   T
Sbjct: 124 APSPSTPSSPPSTPSTPSSPPST 144
[Close]
BLAST of Spo06255.1 vs. ExPASy Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.400e-15
Identity = 45/112 (40.18%), Postives = 60/112 (53.57%), Query Frame = 1 

		  

Query: 11  VALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPGLHSVVE 70
           V LVF+V   E   +  + VG  GGW   T    W  G+TF+ GD LVFKY P +H+VV 
Sbjct: 16  VVLVFLVFNCEVAESVVYTVGDGGGWTFGTS--GWPAGKTFRAGDVLVFKYNPAVHNVVS 75

Query: 71  VGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKV 123
           V +   YK C  S  +     G+D + L + G+ YF C   GHC  G+K+ V
Sbjct: 76  VPA-GGYKSCTASPGSRVFKSGDDRITLSR-GTNYFICSVPGHCQGGLKIAV 123
[Close]
BLAST of Spo06255.1 vs. ExPASy Swiss-Prot
Match: CPC_CUCSA (Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3)

HSP 1 Score: 82.0 bits (201), Expect = 6.900e-15
Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 1 

		  

Query: 25  ATQHIVGGSGGWDESTD---YDSWAKGQTFKVGDTLVFKYTPGLHSVVEVGSESDYKKCD 84
           +T HIVG + GW   +    Y  WA G+TF+VGD+L F +    H+V E+ ++  +  C+
Sbjct: 2   STVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACN 61

Query: 85  TSNAANSMNGGNDVV-KLDKVGSRYFACGTSGHCSAGMKLKVDVVGATGSSS---PSSSS 141
             N+ N +   + V+ +LD++G  YF C    HCS G KL ++VV A  + S   PSSS 
Sbjct: 62  FVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMPPPSSSP 121
[Close]
BLAST of Spo06255.1 vs. TAIR (Arabidopsis)
Match: AT3G27200.1 (Cupredoxin superfamily protein)

HSP 1 Score: 149.8 bits (377), Expect = 1.500e-36
Identity = 76/144 (52.78%), Postives = 104/144 (72.22%), Query Frame = 1 

		  

Query: 4   LKRMSMMVALVFVVLITEQVC-ATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYT 63
           +K  +++V LVF  L++ +   A +H++GGS GW++S D+DSW+  Q+FKVGD +VFKY+
Sbjct: 1   MKMQAVLVILVFSGLLSVKTALAARHVIGGSQGWEQSVDFDSWSSDQSFKVGDQIVFKYS 60

Query: 64  PGLHSVVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKV 123
             LHSVVE+GSE+ YK CD   + NS++ GNDVVKL K G+RYFACGT GHC  GMK+KV
Sbjct: 61  E-LHSVVELGSETAYKSCDLGTSVNSLSSGNDVVKLSKTGTRYFACGTVGHCEQGMKIKV 120

Query: 124 DVVGATGSSSPSSSSSSSNTDVSS 147
           +VV +   S+ S S S S +D  S
Sbjct: 121 NVVSSDSKSASSPSGSGSGSDSGS 143
[Close]
BLAST of Spo06255.1 vs. TAIR (Arabidopsis)
Match: AT5G07475.1 (Cupredoxin superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 4.000e-21
Identity = 52/134 (38.81%), Postives = 81/134 (60.45%), Query Frame = 1 

		  

Query: 11  VALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPGLHSVVE 70
           + ++F V++  +  AT + VG S GWD S+D +SW  G+ F  GD L+F+Y+   HSV E
Sbjct: 13  LCIIFGVVVIRRCNATTYFVGDSSGWDISSDLESWTSGKRFSPGDVLMFQYS-STHSVYE 72

Query: 71  VGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKVDVVGATGS 130
           V  + +Y+ C+T++A  +   GN  V L K G+R+F CG   HC AGM+L V+V G   S
Sbjct: 73  VAKD-NYQNCNTTDAIRTFTNGNTTVALSKPGNRFFVCGNRLHCFAGMRLLVNVEGNGPS 132

Query: 131 SSPSSSSSSSNTDV 145
            +P  S  ++ + +
Sbjct: 133 QAPVGSPQAATSGI 144
[Close]
BLAST of Spo06255.1 vs. TAIR (Arabidopsis)
Match: AT2G32300.1 (uclacyanin 1)

HSP 1 Score: 94.0 bits (232), Expect = 9.900e-20
Identity = 53/131 (40.46%), Postives = 74/131 (56.49%), Query Frame = 1 

		  

Query: 5   KRMSMMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPG 64
           + M ++++++   LI   V AT H +GG  GW       +WA GQTF VGD LVF Y   
Sbjct: 4   REMLIIISVLATTLIGLTV-ATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAA 63

Query: 65  LHSVVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKVDV 124
            H VVEV ++ ++  C       +   GN +V L   G RYF CG  GHCS GMKL+V+V
Sbjct: 64  FHDVVEV-TKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNV 123

Query: 125 VGATGSSSPSS 136
           V  T + +P++
Sbjct: 124 V-PTATVAPTA 131
[Close]
BLAST of Spo06255.1 vs. TAIR (Arabidopsis)
Match: AT3G60270.1 (Cupredoxin superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 3.800e-19
Identity = 57/140 (40.71%), Postives = 78/140 (55.71%), Query Frame = 1 

		  

Query: 1   MGELKRMSMMVALVFVVLITEQVCATQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFK 60
           MG     ++++ L+ V +    V A    VG + GW    +Y SW   +TF+VGDTL FK
Sbjct: 1   MGSTAATALLLLLLLVAV--PAVFAVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFK 60

Query: 61  YTPGLHSVVEVGSESDYKKCDTSNAANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKL 120
           Y P  HSV  V +++DY  C+TS    S + G+  + L KVG+ +F C T GHCS GMKL
Sbjct: 61  YGPS-HSVAVV-NKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKL 120

Query: 121 KVDVVGATGSSSPSSSSSSS 141
            V V+ A     P S S+ S
Sbjct: 121 AVQVLAAVSLEPPPSPSAPS 136
[Close]
BLAST of Spo06255.1 vs. TAIR (Arabidopsis)
Match: AT3G17675.1 (Cupredoxin superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.900e-18
Identity = 42/99 (42.42%), Postives = 57/99 (57.58%), Query Frame = 1 

		  

Query: 26  TQHIVGGSGGWDESTDYDSWAKGQTFKVGDTLVFKYTPGLHSVVEVGSESDYKKCDTSNA 85
           T+HIVG S GW+  T+Y +W +G+ F VGD LVF Y    H+V++V S + Y  C   N 
Sbjct: 7   TEHIVGDSNGWELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTA-YTDCGLDNY 66

Query: 86  ANSMNGGNDVVKLDKVGSRYFACGTSGHCSAGMKLKVDV 125
                 GND + L +VG  +F CG   HC  G KL ++V
Sbjct: 67  TTLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINV 104
The following BLAST results are available for this feature:
BLAST of Spo06255.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902219839|gb|KNA18428.1|1.6e-88100.hypothetical protein SOVF_0708... [more]
gi|731319714|ref|XP_010670421.1|4.0e-5568.5PREDICTED: basic blue protein-... [more]
gi|743919813|ref|XP_011003937.1|3.9e-4260.6PREDICTED: mavicyanin [Populus... [more]
gi|225452130|ref|XP_002262831.1|5.1e-4259.4PREDICTED: mavicyanin [Vitis v... [more]
gi|661879608|emb|CDP16681.1|3.3e-4158.2unnamed protein product [Coffe... [more]
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BLAST of Spo06255.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RG09_SPIOL1.1e-88100.Uncharacterized protein OS=Spi... [more]
A0A0J8CTJ2_BETVU2.8e-5568.5Uncharacterized protein OS=Bet... [more]
D7UBD5_VITVI3.5e-4259.4Putative uncharacterized prote... [more]
A0A068V7U4_COFCA2.3e-4158.2Uncharacterized protein OS=Cof... [more]
V7CWU5_PHAVU6.7e-4155.9Uncharacterized protein OS=Pha... [more]
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BLAST of Spo06255.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
BCP_PEA3.8e-2144.8Blue copper protein OS=Pisum s... [more]
BABL_CUCSA2.1e-1642.8Basic blue protein OS=Cucumis ... [more]
BCB3_ARATH6.2e-1638.4Uclacyanin-3 OS=Arabidopsis th... [more]
BABL_LILLO1.4e-1540.1Chemocyanin OS=Lilium longiflo... [more]
CPC_CUCSA6.9e-1538.2Cucumber peeling cupredoxin OS... [more]
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BLAST of Spo06255.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G27200.11.5e-3652.7Cupredoxin superfamily protein[more]
AT5G07475.14.0e-2138.8Cupredoxin superfamily protein[more]
AT2G32300.19.9e-2040.4uclacyanin 1[more]
AT3G60270.13.8e-1940.7Cupredoxin superfamily protein[more]
AT3G17675.11.9e-1842.4Cupredoxin superfamily protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003245Phytocyanin domainPRODOMPD003122coord: 58..124
score: 3.0
IPR003245Phytocyanin domainPFAMPF02298Cu_bind_likecoord: 37..118
score: 1.4
IPR003245Phytocyanin domainPROFILEPS51485PHYTOCYANINcoord: 26..126
score: 44
IPR008972CupredoxinGENE3D2.60.40.420coord: 25..130
score: 3.4
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 25..125
score: 1.53
NoneNo IPR availablePANTHERPTHR33021FAMILY NOT NAMEDcoord: 9..147
score: 5.3
NoneNo IPR availablePANTHERPTHR33021:SF50SUBFAMILY NOT NAMEDcoord: 9..147
score: 5.3

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045491 xylan metabolic process
biological_process GO:0006000 fructose metabolic process
biological_process GO:0006013 mannose metabolic process
biological_process GO:0006080 substituted mannan metabolic process
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0071555 cell wall organization
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0006011 UDP-glucose metabolic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0016985 mannan endo-1,4-beta-mannosidase activity
molecular_function GO:0016760 cellulose synthase (UDP-forming) activity
molecular_function GO:0046872 metal ion binding
RNA-Seq Expression