Spo06292 (gene)

Overview
NameSpo06292
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRac-like GTP-binding protein
LocationSpoScf_02532 : 37577 .. 44379 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGCTTCGAGGTTCATAAAATGTGTTACAGTTGGTGATGGTGCCGTTGGTAAAACTTGCTTGTTGATTTCCTACACCAGCAACACCTTCCCTACGGTCTGTTTATCTCTCTCTCTCTCTCTCGGAATTTTGTTTCAATTTCGCGGAATTTGTTGTTTATTTATTTGTCTTTTTTTTTGTGTGATTTGACATCGCTTTTACTATTGTCTGAATTGTGGATATGACATTGTTTTATTGAATTCCTTGGTTTAATCCCGGCTTGAAAAAAAACATTGGTTGGTGATTGAATTTCTAGTTCTTATTGAAATTTGGTGCCGCTGCAAAACAATTAAATGCAGTGGTAGCGAATATGCAGGCATTTTGTTGGCTTGAGGATCGAGTTACTTGTTTATTTTTGGATGATTTACAAGTTTTAATCTCGACTAGTATGGTTGATCATTTTTAATTTAGGATAAGGACTGTTCACGGAGGATGTTATTCAAGCATTTAAGCTTAGGATAGCTATTTGTTAGTTCCTCTTACGTGATTTTTATTCGTATTGGCACCTCATTTGAAGTTCAGATTTCTAGTTTTGTTATTGAATTCGTCTCTTCCACTAGCTGTATTGTGTTGGTTTCTTAATTGAAGACCAGATTCTAGTTTCGTAATTGAATTTGTCTCTAATTCATGGTTATTTGGTTTTTACTACATCGCCAAACGGTACATATCATGGCGTATTATTATGTCAGTGATCTTTTTTTCGTGTTCCTTGCAAAATTGGACATGTATTAGTTACTCATAAATGTGACAGTTGTTTTTCTTCCTCTATTTTAAGTAATTCAGTTTGTGGTGGCTATTTCTTTCTCGCAATAACATTCTAATAACATTGAGTTTGATATGTCCTGTCCAATTCCTTGGATTATTGGTCCCTCTGTAGGACTTCTTTAGCTAAGACACTATTTCTAAGGTATCTATTGAGATGTTTTAAAATGACTTTGTCTTTCCATCTAACCGTTAGTGAGCCAACAATGAGTCTGTTGGGGCATTTATGTAATTTTAAGTTACTATGGGGCCCATAACTCTTCTTTCTTGTCATCTGAATAGTTTTTTCTTCTTTTGGAACCAAAGTACTCTGTTACAGTGTTACTATGACGGTCTGAATTTCCTTGGCATACCATGTCAAACATGTATCTAAGAACAAAAACGAATATGATTCATGAAAAATCTCAGATAGCATAGAAAAACATGACTTATCCATATCAGGTACTCCCAATGAGTTTGGCATTTCAGTACAGTCTAAGAAGTAACATCCACTGAAATAGAATTCAAGGAGTCTAGTTGTGAAATTGATATTGAGCTAAGTTTTCTTGAACTGTTGGTCCTATCCTTCTGTTCCTTTTACCCCCCTCTAAATTTGTTTGTATGGTGGAAACAGGATTATGTGCCCACTGTCTTCGACAACTTCAGTGCAAATGTCGTCGTTAACGGGGCAACAGTTAACCTGGGGTTATGGGATACTGCAGGTAGGCCTTATTTTTGCTTGTCTTCTCCTTTAGTTGAAATCGAAATTGCCCTCTTTGTTCAAGGAATTCAATTCTGTGTTATTTGTTCTACAGGACAAGAGGACTACAACAGATTAAGACCTTTGAGTTATCGTGGTGCAGATGTTTTCATTCTTGCTTTCTCCCTCATTAGCAAGGCTAGTTATGAAAATGTGTCTAAGAAGGTAAACAATGTTTAGATACTTACAAGGAAACATTTTGTGGATAAGACCCTTGGCGTGTGCTAATGAGCTGTTGTTGCCACATAATTTACAGTGGATTCCCGAGTTGAAGCATTATGCTCCTGGTGTCCCCATTGTTCTTGTTGGAACAAAGCTCGGTCAGGATCATACTTGTCTCTTTTGTTTCAATTTTGCGTTTCAGTCTTATTTCTGTTAATTGGTAGCACTTCACATATATGTACATGCAACTGGTTGCAGTTTGTTAAATCATTGACTCGAGGAATGGTTTTAGAAAAAAAAATTGGAAAGCGCTTTGCTTTCCTTTTGATTGCTATTTCTCTTTTCTGTTTGTTCATGAATTGCCTGCTAGTTTTTTTTGGGATCTGATCTATCTACAAAATTTGAGACAGATGTTTTTAACATTGTTTGACTATATTTAAGTAGAAGCATTGTGGAATAATATGGCACAGTTCGATTATCCACATTTCCATCATGTTTCCGAGATACTGGCATTTCTCGAGCAAAGAAGATTTGTATTCAGAAGTTCTGATTACCCTAGAAAAGCTAGCTATATTTTATCAGGGCATATATGGCATTTTTGATATCTGGTTGGTTGAGTGCTGTCTAGTAGCTGGAACCTGTGTTTTGTTTATTTTGCAAGCTTGGATTTCTGTTTTTGTAATCATATTTTTGATATTGAAGTTAATCTTGCTTTGATTGCATGACATTAGATCTTCGGGATGACAAGCAGTTTTTCATAGACCACCCTGGCGCTGTTCCAATTACTACAGCTCAGGTAAAAAAAAAAACTGGTATCCTGCATATTTTTCCCAGTTCTGTAATTTGTTAAAAATCATGTGGACCAAAGTATTTCTATATTGTTCTGTTCAGGGTGAGGAATTGAGGAAGCTGATTGGTGCTCCTGCTTACATCGAATGTAGTTCAAAAACACAGCAGGTGGGTTATTGATTGTCAGTCTGAGAGATTTACAGTTACAACTTGTGAACTTAAATATGCCAACTAATTAAATACTTAAATATGCAGAATGTGAAGGCAGTTTTTGATGCAGCCATTAAGGTTGTTCTTCAACCACCAAAGACAAAGAAAAAGAAGTCAAAGGCACAGAAGGCTTGCTCCATATTGTAATTGTGACAAAGTTGTAAAGAGAAACAAGCCAGCCCTAGTTGGAGCATTCCGTCACGCGTGCAACTTTTTTCTTTCACAAAATCAAGCTTTTGAGGAAGCAGGCAGGCAGGCCTTTTTTTAGCGTATGATTTCTTACTGATTGATTGTACTTTAGGTTCTCTTGTGAGTTGCTTTCTGGCATTACATTTGGTTACCCAACCCCACCATCTAATTCGTGGTTTTGGTTAAGTCTTTATGTATTAAATATAAGGTACCAGTTTAGGAAAGGACCCAATTTTATCCCCTTAACCTAGCAGAGCAGTTAAATTCATTTCTTCACAACTACTTGTTTTGAAGATAATTGCCTCTGGCTACATTTTTTATGTTTCTTTTTGGTTTTTGTAGTGAAAAGTTAAATATGTCGCTCTTTTTGATACTATTGTTCTATTCTGGCCTTCTTCTAATTAGTTATTGATTCAATTGTTGCCCAAACAATTGATGTAGTAATAGTTGGCCTTTTGGGAATCTTATTTGAAGAGTCTGCCTCCATCTAACCAACTTTTAAGTTGGTTGAGTTTGCAAAAATATGAATATTTTAAGAAGGTGATCATGATACTTTGTGTTTGACATGATTAGATAGATTGTTGATGTAGAATATTTAGCAGTTTCTGGAATGTTTGATTATGTTGGTTTGTTCCATGAGCCGCCCACGTTCTTCCTTGCGGATTTTCTGGAATTGAGCATATTCTATATCTGATTTTAGTACATATTAATCAAAGTATGGTAGTAAAAAAATGATGTGTTTTCAAGCAAACAATTGTGATAAGTATTTCAAAATGATTGATTAATCTTTGAACGACCAACTTGGTCCTGCGATTCCTGCCTTTACCATATATACTCAGAAGGTCTCATATGGATGTTTGGTAGTGTCATGTTTAGAAGCTTAGAACGATGGTCTGAAAGGTCGACTGCCTAATGTTTCTTGTGCGGTGGAAACAAGGTAAAAACAGGAAACGTAAGCAAGCTTTCCATTACCAGAATAGTAAACTGGCTAAAAATTCAACCATAAAACAATATATTAGGCAAACCTGAATCATATTAAATCCAACATAGTAATAATAACACGTTTATTATGCTTGCAATTAGTCATAATCTCAATTTAATACTATAAATACGACGATTTTTAATCGATCGGGTCAAAACGGTTTGGTCGGATTTTGACCCATTAGATTAGGGTTGTTGGGGTTTGTATAAAATCAGGATACAAGTCATAAAATTTTGTTCAAAATCCAGTATTTTTGATAGCTCTACGCTCAAACCATCAACAATCCCCTTTCCCCCAATCCAAAACGCTGCTAATGGATTGCACATAGCCACGTATGGGAGATAATGTTATCTACTCTAAAGGGAGTCAAGGCCCCAATCAAGGGGCCATATGTATCGAACTCTAATTCTATAATCACCTTCCATTTTACCTCCAAAATTCATATCAAAACCTTGTACAAATATAAACGGTATGAGAAGAAGAAAACAACAATTCTTTGGCGCAGCAAACAAGTTTAATGTAGAACGAACTAGTTTAAAGTATGATCAAAATGAATTCATTCTGTTGAAACTGGCTGTCTAACGTCGGCCTCAATTTAACCGAATCAGTCGTGGCATGAACAAATAACTTTATATCTTAGAAGTGTGAGGTGTGAGTGTGTGACAGTATGAGAATGACTTGAATTTTAAACAGCAAAAAAGAAAGAATGGTCAGCTAATCTTGTATGCGTTGTTGTGATTGTACAATGAGTACAAAGTGTAGATAGCTCAGTTGTTTTGTCCAACTATACAAAGAATCCAACTTTGTGTTTCATTTACAGCTAGTCCAGCATCTAAGATGCAGAGACGTTTCTGAATTTATAAAATTTGCTGCTTCCCCTTTGATTTCACAACAATTACGAGACAAGAGATAATATATTCGAGTATGATAATAAACTGGAATATGAACATATAACATCCTAGCTTTGAACTGAAGATGATCAAACTGACTAACTGATCCGAAGCAATCCAAACAAACCACTTTCCTATGCACGTTTAAAATGGGAGCATATTGATCTCCCCACAAAACTATAACAAAGGGATAAACTTTTGATCTGAACGTACAAACTCAACTTGGTTACACACTTTTCATGTTGCCTTTTTAATATGTTAAACTAATTGGTGGTGCTCATCTAGCAATTTGGAAAGGCGGTCGATTCCCTGAATAATAGTAGCATAATTTCATTCGGGCATCTATGCCTTTCAGCTTTCTGTCCAATTTTCAATACCGTCCTATATATTCTTCTACCTTGTTATTTAAAGGACATGAAAACATCTACATTTTAAGAAGTATAACTCCTTACCCAAAAAGGCAAAAACTCAAACTTCTACCATACTGAAAACTGATAAAAAAATATCGAGATATCAGCAGATGGCTATGAAGAGGATTCTAAAAGGAGCTTCAAGACATGGAGACAGATCCTCCTAATTCATGCAGCGGCAGGTAGTTTAACTGCAAAACCCACCAACTTATTCAAGAGAATCACGATCCGACTGGTTACTGTGTACTAAAATTGTGCTTTCTTGATGAATTCAGCTCCTGCATCTGATAACTTATACCAGTAGCAAGCGACAATCATCGGCCCTGCTGATAGTCCATATGCTGGTGGTGTTTTCCTTTTGAGCATTTACTTTCCCAGTGATTATCCTTTCAAACCACCAAAGGTAGGTAATATGTCAATGTTGAGTTTGTAACAAATTGTATACTTGTATTAGTAATTCTATTTTCACTAAATTTTCATTAACAAGATAAATTGACAGGTCGCATTCAGGTCCAAAGTGTTCCATCCACACATAAACAATAATGGGAATATATGCCTGGACATTCTCAGGGAACAGTGGAGCCCTGCCCTTACTATTTCCAAGGTTAATCTTGTCATTTAAACTGTTCAATTTCTTGACAAAGTCATCATTGTTTAACCACTCGTTTAAATGGTTTGGACAAATGCAGGTTCTGCTATCAATATGTTCTCTACTTACACTCTTACAGACCCAAACTCTGATGATCCTCTTGTTGCTGAAATCGCTCACATGTACAAGGATCGGACCAAGTTCGAGGCCACAGCTAAGAGCTGGACACTCAAATATGCCATGAATTAAAAATATTCAAAGCATCAAATATCAAATATTCAAATCTCCCGTTGTATTTCCCCCATTGACAGCTTCAAGTTCAAACAAGCCTATTACTATGGCAATGAAATTAAACTTATTACCAAATATTGATTCTGTCATCTTATGTACCTTGAGACTTGTGTTAATGAATAGACTTCACACAGCTGCATTTAGGTAATGCAGAATATAACATTAAAATCTTGGATGTGGAAAATTTTGGGAGACTTACAAGGTGGCAAAGACGCGTTAGTTGAAACCGACAGCAATCATGTAGTCATGTATAAATCCCACAAAAAAATTGAAAACAGAAAGGGAAAGTTATACACCATTTTACCAGTCTTTACAACTAAAGTTTCCACTGCACAATGAAGTGACTTACACACACTCATGAATTAAAGAAAACTTTAGATGCAGTGAGCTCATATAGTTAGTATAAGAGACCTAAAAAATCATGCCCTCGGAATGAGGTCAAGCAAACAGTCTCCATCAGGTTACCTCACTAAACTGGTTACAATAATACTCAATGACGTTAACTAGTGATACGTGAAAATGCCTAATTACATATAAGAACAGGTTCAAGCTTTGACAGGTTCATACTTCTCACTAACTGCGCCACCTTTTTGTTTCTGGAATTGGATGTACCGCAATGTGCTTGCAAAGAAAGCTTCAGCAGCAGGATCTGTTGCCGCATTATCACTTTGCATCTCCGTAGTAATTAATTCCATTAGATCCTGGATTGTATTGACCGTGATTTGGTTGTTTCCCTTCTCAAAATAAT

mRNA sequence

ATGAGTGCTTCGAGGTTCATAAAATGTGTTACAGTTGGTGATGGTGCCGTTGGTAAAACTTGCTTGTTGATTTCCTACACCAGCAACACCTTCCCTACGGATTATGTGCCCACTGTCTTCGACAACTTCAGTGCAAATGTCGTCGTTAACGGGGCAACAGTTAACCTGGGGTTATGGGATACTGCAGGACAAGAGGACTACAACAGATTAAGACCTTTGAGTTATCGTGGTGCAGATGTTTTCATTCTTGCTTTCTCCCTCATTAGCAAGGCTAGTTATGAAAATGTGTCTAAGAAGTGGATTCCCGAGTTGAAGCATTATGCTCCTGGTGTCCCCATTGTTCTTGTTGGAACAAAGCTCGATCTTCGGGATGACAAGCAGTTTTTCATAGACCACCCTGGCGCTGTTCCAATTACTACAGCTCAGGGTGAGGAATTGAGGAAGCTGATTGGTGCTCCTGCTTACATCGAATGTAGTTCAAAAACACAGCAGAATGTGAAGGCAGTTTTTGATGCAGCCATTAAGATTGTTGATGTAGAATATTTAGCAGTTTCTGGAATGTTTGATTATGTTGATGGCTATGAAGAGGATTCTAAAAGGAGCTTCAAGACATGGAGACAGATCCTCCTAATTCATGCAGCGGCAGCTCCTGCATCTGATAACTTATACCATGATTATCCTTTCAAACCACCAAAGGTCGCATTCAGGTCCAAAGTGTTCCATCCACACATAAACAATAATGGGAATATATGCCTGGACATTCTCAGGGAACAGTGGAGCCCTGCCCTTACTATTTCCAAGGTTCTGCTATCAATATGTTCTCTACTTACACTCTTACAGACCCAAACTCTGATGATCCTCTTGTTGCTGAAATCGCTCACATGTACAAGGATCGGACCAAGTTCGAGGCCACAGCTAAGAGCTGGACACTCAAATATGCCATGAATTAAAAATATTCAAAGCATCAAATATCAAATATTCAAATCTCCCGTTGTATTTCCCCCATTGACAGCTTCAAGTTCAAACAAGCCTATTACTATGGCAATGAAATTAAACTTATTACCAAATATTGATTCTGTCATCTTATGTACCTTGAGACTTGTGTTAATGAATAGACTTCACACAGCTGCATTTAGGTAATGCAGAATATAACATTAAAATCTTGGATGTGGAAAATTTTGGGAGACTTACAAGGTGGCAAAGACGCGTTAGTTGAAACCGACAGCAATCATGTAGTCATGTATAAATCCCACAAAAAAATTGAAAACAGAAAGGGAAAGTTATACACCATTTTACCAGTCTTTACAACTAAAGTTTCCACTGCACAATGAAGTGACTTACACACACTCATGAATTAAAGAAAACTTTAGATGCAGTGAGCTCATATAGTTAGTATAAGAGACCTAAAAAATCATGCCCTCGGAATGAGGTCAAGCAAACAGTCTCCATCAGGTTACCTCACTAAACTGGTTACAATAATACTCAATGACGTTAACTAGTGATACGTGAAAATGCCTAATTACATATAAGAACAGGTTCAAGCTTTGACAGGTTCATACTTCTCACTAACTGCGCCACCTTTTTGTTTCTGGAATTGGATGTACCGCAATGTGCTTGCAAAGAAAGCTTCAGCAGCAGGATCTGTTGCCGCATTATCACTTTGCATCTCCGTAGTAATTAATTCCATTAGATCCTGGATTGTATTGACCGTGATTTGGTTGTTTCCCTTCTCAAAATAAT

Coding sequence (CDS)

ATGAGTGCTTCGAGGTTCATAAAATGTGTTACAGTTGGTGATGGTGCCGTTGGTAAAACTTGCTTGTTGATTTCCTACACCAGCAACACCTTCCCTACGGATTATGTGCCCACTGTCTTCGACAACTTCAGTGCAAATGTCGTCGTTAACGGGGCAACAGTTAACCTGGGGTTATGGGATACTGCAGGACAAGAGGACTACAACAGATTAAGACCTTTGAGTTATCGTGGTGCAGATGTTTTCATTCTTGCTTTCTCCCTCATTAGCAAGGCTAGTTATGAAAATGTGTCTAAGAAGTGGATTCCCGAGTTGAAGCATTATGCTCCTGGTGTCCCCATTGTTCTTGTTGGAACAAAGCTCGATCTTCGGGATGACAAGCAGTTTTTCATAGACCACCCTGGCGCTGTTCCAATTACTACAGCTCAGGGTGAGGAATTGAGGAAGCTGATTGGTGCTCCTGCTTACATCGAATGTAGTTCAAAAACACAGCAGAATGTGAAGGCAGTTTTTGATGCAGCCATTAAGATTGTTGATGTAGAATATTTAGCAGTTTCTGGAATGTTTGATTATGTTGATGGCTATGAAGAGGATTCTAAAAGGAGCTTCAAGACATGGAGACAGATCCTCCTAATTCATGCAGCGGCAGCTCCTGCATCTGATAACTTATACCATGATTATCCTTTCAAACCACCAAAGGTCGCATTCAGGTCCAAAGTGTTCCATCCACACATAAACAATAATGGGAATATATGCCTGGACATTCTCAGGGAACAGTGGAGCCCTGCCCTTACTATTTCCAAGGTTCTGCTATCAATATGTTCTCTACTTACACTCTTACAGACCCAAACTCTGATGATCCTCTTGTTGCTGAAATCGCTCACATGTACAAGGATCGGACCAAGTTCGAGGCCACAGCTAAGAGCTGGACACTCAAATATGCCATGA

Protein sequence

MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIVDVEYLAVSGMFDYVDGYEEDSKRSFKTWRQILLIHAAAAPASDNLYHDYPFKPPKVAFRSKVFHPHINNNGNICLDILREQWSPALTISKVLLSICSLLTLLQTQTLMILLLLKSLTCTRIGPSSRPQLRAGHSNMP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06292.1Spo06292.1mRNA


Homology
[Close]
BLAST of Spo06292.1 vs. NCBI nr
Match: gi|733214481|ref|NP_001290012.1| (rac-like GTP-binding protein RHO1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 360.5 bits (924), Expect = 2.900e-96
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIK+V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVV 177
[Close]
BLAST of Spo06292.1 vs. NCBI nr
Match: gi|743936330|ref|XP_011012556.1| (PREDICTED: rac-like GTP-binding protein RHO1 isoform X2 [Populus euphratica])

HSP 1 Score: 359.4 bits (921), Expect = 6.500e-96
Identity = 175/177 (98.87%), Postives = 177/177 (100.00%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI++V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 177
[Close]
BLAST of Spo06292.1 vs. NCBI nr
Match: gi|566170759|ref|XP_006383072.1| (RAC-like GTP binding protein RHO1 [Populus trichocarpa])

HSP 1 Score: 359.4 bits (921), Expect = 6.500e-96
Identity = 175/177 (98.87%), Postives = 177/177 (100.00%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI++V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 177
[Close]
BLAST of Spo06292.1 vs. NCBI nr
Match: gi|221164121|gb|ACM07419.1| (Rac/Rop-like small GTPase [Scoparia dulcis])

HSP 1 Score: 358.6 bits (919), Expect = 1.100e-95
Identity = 174/177 (98.31%), Postives = 177/177 (100.00%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEELRK+IGAPAYIECSSKTQQNVKAVFDAAIK+V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKMIGAPAYIECSSKTQQNVKAVFDAAIKVV 177
[Close]
BLAST of Spo06292.1 vs. NCBI nr
Match: gi|697121070|ref|XP_009614505.1| (PREDICTED: rac-like GTP-binding protein RHO1 [Nicotiana tomentosiformis])

HSP 1 Score: 357.5 bits (916), Expect = 2.500e-95
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEELRK IGAPAYIECSSKTQQNVKAVFDAAIK+V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKTIGAPAYIECSSKTQQNVKAVFDAAIKVV 177
[Close]
BLAST of Spo06292.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QD09_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193000 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 2.000e-96
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIK+V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVV 177
[Close]
BLAST of Spo06292.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CBK3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g130240 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 2.000e-96
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIK+V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVV 177
[Close]
BLAST of Spo06292.1 vs. UniProtKB/TrEMBL
Match: B9MXD5_POPTR (RAC-like GTP binding protein RHO1 OS=Populus trichocarpa GN=POPTR_0005s11290g PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.500e-96
Identity = 175/177 (98.87%), Postives = 177/177 (100.00%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI++V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 177
[Close]
BLAST of Spo06292.1 vs. UniProtKB/TrEMBL
Match: B9VI82_SCODU (Rac/Rop-like small GTPase OS=Scoparia dulcis GN=rac-2 PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 7.700e-96
Identity = 174/177 (98.31%), Postives = 177/177 (100.00%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEELRK+IGAPAYIECSSKTQQNVKAVFDAAIK+V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKMIGAPAYIECSSKTQQNVKAVFDAAIKVV 177
[Close]
BLAST of Spo06292.1 vs. UniProtKB/TrEMBL
Match: A0A068U0L8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00037042001 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.700e-95
Identity = 173/177 (97.74%), Postives = 177/177 (100.00%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEELRK+IGAPAYIECSSKTQQNVK+VFDAAIK+V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKMIGAPAYIECSSKTQQNVKSVFDAAIKVV 177
[Close]
BLAST of Spo06292.1 vs. ExPASy Swiss-Prot
Match: RAC1_BETVU (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris GN=RHO1 PE=2 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.800e-98
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIK+V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVV 177
[Close]
BLAST of Spo06292.1 vs. ExPASy Swiss-Prot
Match: RAC1_ARATH (Rac-like GTP-binding protein ARAC1 OS=Arabidopsis thaliana GN=ARAC1 PE=1 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 5.900e-97
Identity = 172/177 (97.18%), Postives = 176/177 (99.44%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEEL+KLIGAPAYIECSSKTQ+NVK VFDAAI++V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVV 177
[Close]
BLAST of Spo06292.1 vs. ExPASy Swiss-Prot
Match: RHO1_PEA (Rac-like GTP-binding protein RHO1 OS=Pisum sativum GN=RHO1 PE=2 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.200e-96
Identity = 170/177 (96.05%), Postives = 176/177 (99.44%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFF+DHPGAVPITTAQGEELRKLI APAYIECSSK+QQNVKAVFDAAI++V
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVKAVFDAAIRVV 177
[Close]
BLAST of Spo06292.1 vs. ExPASy Swiss-Prot
Match: RAC11_ARATH (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana GN=ARAC11 PE=1 SV=2)

HSP 1 Score: 352.8 bits (904), Expect = 3.800e-96
Identity = 170/177 (96.05%), Postives = 175/177 (98.87%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRF+KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEELRK IGAP YIECSSKTQ+NVKAVFDAAI++V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVV 177
[Close]
BLAST of Spo06292.1 vs. ExPASy Swiss-Prot
Match: RAC6_ARATH (Rac-like GTP-binding protein ARAC6 OS=Arabidopsis thaliana GN=ARAC6 PE=1 SV=2)

HSP 1 Score: 352.4 bits (903), Expect = 5.000e-96
Identity = 170/177 (96.05%), Postives = 175/177 (98.87%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITT QGEEL+KLIGAPAYIECSSK+Q+NVK VFDAAI++V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVV 177
[Close]
BLAST of Spo06292.1 vs. TAIR (Arabidopsis)
Match: AT2G17800.1 (Arabidopsis RAC-like 1)

HSP 1 Score: 355.5 bits (911), Expect = 3.300e-98
Identity = 172/177 (97.18%), Postives = 176/177 (99.44%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEEL+KLIGAPAYIECSSKTQ+NVK VFDAAI++V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVV 177
[Close]
BLAST of Spo06292.1 vs. TAIR (Arabidopsis)
Match: AT3G51300.1 (RHO-related protein from plants 1)

HSP 1 Score: 352.8 bits (904), Expect = 2.100e-97
Identity = 170/177 (96.05%), Postives = 175/177 (98.87%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRF+KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITTAQGEELRK IGAP YIECSSKTQ+NVKAVFDAAI++V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVV 177
[Close]
BLAST of Spo06292.1 vs. TAIR (Arabidopsis)
Match: AT4G35950.1 (RAC-like 6)

HSP 1 Score: 352.4 bits (903), Expect = 2.800e-97
Identity = 170/177 (96.05%), Postives = 175/177 (98.87%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITT QGEEL+KLIGAPAYIECSSK+Q+NVK VFDAAI++V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVV 177
[Close]
BLAST of Spo06292.1 vs. TAIR (Arabidopsis)
Match: AT1G75840.1 (RAC-like GTP binding protein 5)

HSP 1 Score: 346.3 bits (887), Expect = 2.000e-95
Identity = 166/177 (93.79%), Postives = 174/177 (98.31%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFFIDHPGAVPITT QGEEL+KLIG+P YIECSSKTQQNVKAVFDAAIK+V
Sbjct: 121 DLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVV 177
[Close]
BLAST of Spo06292.1 vs. TAIR (Arabidopsis)
Match: AT4G35020.1 (RAC-like 3)

HSP 1 Score: 345.1 bits (884), Expect = 4.500e-95
Identity = 162/177 (91.53%), Postives = 175/177 (98.87%), Query Frame = 1 

		  

Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+V+G T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENVSKKW+PEL+HYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKIV 178
           DLRDDKQFF +HPGAVPI+TAQGEEL+KLIGAPAYIECS+KTQQNVKAVFDAAIK+V
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVV 177
The following BLAST results are available for this feature:
BLAST of Spo06292.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|733214481|ref|NP_001290012.1|2.9e-9699.4rac-like GTP-binding protein R... [more]
gi|743936330|ref|XP_011012556.1|6.5e-9698.8PREDICTED: rac-like GTP-bindin... [more]
gi|566170759|ref|XP_006383072.1|6.5e-9698.8RAC-like GTP binding protein R... [more]
gi|221164121|gb|ACM07419.1|1.1e-9598.3Rac/Rop-like small GTPase [Sco... [more]
gi|697121070|ref|XP_009614505.1|2.5e-9598.3PREDICTED: rac-like GTP-bindin... [more]
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BLAST of Spo06292.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QD09_SPIOL2.0e-9699.4Uncharacterized protein OS=Spi... [more]
A0A0J8CBK3_BETVU2.0e-9699.4Uncharacterized protein OS=Bet... [more]
B9MXD5_POPTR4.5e-9698.8RAC-like GTP binding protein R... [more]
B9VI82_SCODU7.7e-9698.3Rac/Rop-like small GTPase OS=S... [more]
A0A068U0L8_COFCA1.7e-9597.7Uncharacterized protein OS=Cof... [more]
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BLAST of Spo06292.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RAC1_BETVU1.8e-9899.4Rac-like GTP-binding protein R... [more]
RAC1_ARATH5.9e-9797.1Rac-like GTP-binding protein A... [more]
RHO1_PEA2.2e-9696.0Rac-like GTP-binding protein R... [more]
RAC11_ARATH3.8e-9696.0Rac-like GTP-binding protein A... [more]
RAC6_ARATH5.0e-9696.0Rac-like GTP-binding protein A... [more]
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BLAST of Spo06292.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G17800.13.3e-9897.1Arabidopsis RAC-like 1[more]
AT3G51300.12.1e-9796.0RHO-related protein from plant... [more]
AT4G35950.12.8e-9796.0RAC-like 6[more]
AT1G75840.12.0e-9593.7RAC-like GTP binding protein 5[more]
AT4G35020.14.5e-9591.5RAC-like 3[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 223..277
score: 3.1
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 225..277
score: 21
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 8..175
score: 2.1
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 7..171
score: 2.3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 224..277
score: 7.7
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 224..277
score: 3.53
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 240..255
scor
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 6..176
score: 2.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..176
score: 8.85
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 109..122
score: 2.3E-36coord: 30..46
score: 2.3E-36coord: 47..69
score: 2.3E-36coord: 155..177
score: 2.3E-36coord: 7..28
score: 2.3
NoneNo IPR availablePANTHERPTHR24072RHO FAMILY GTPASEcoord: 1..177
score: 5.1E
NoneNo IPR availablePANTHERPTHR24072:SF179RAC-LIKE GTP-BINDING PROTEIN ARAC1-RELATEDcoord: 1..177
score: 5.1E
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 4..180
score: 1.9
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 9..180
score: 1.5E
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 7..179
score: 8.9
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 12..198
score: 9.
NoneNo IPR availableSMARTSM00212ubc_7coord: 174..313
score: 4.
NoneNo IPR availablePROFILEPS51420RHOcoord: 1..177
score: 24

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006687 glycosphingolipid metabolic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0009058 biosynthetic process
biological_process GO:0006811 ion transport
biological_process GO:0055072 iron ion homeostasis
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016020 membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0004767 sphingomyelin phosphodiesterase activity
molecular_function GO:0005215 transporter activity
RNA-Seq Expression