Spo06430 (gene)

Overview
NameSpo06430
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRing finger protein, putative
Locationchr3 : 56688487 .. 56689179 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGCTTCAACTTCCTTTGCTTCTCTCCCTCAAGAAATAGTTAACAAACTTCACTATTCTAGAAGATTACTACTTCACTCCCCCTTTCAACCCTCACTACCTGTAACATCACAAGCACCAACACCAACCTACCAAGTCCTTGACCCGACTGGTACGACCCATGGCAATCCCGGGTTTGATGCTAACATAGTCATGATCCTCGCGGTATTGGTTTGCGCTCTAATCTGTTCTTTATGCATAAACACCTTCATTAGGTGTGTCATTAAGTGCTCTAGCATGATTACAGGGGAGCCTAATTACTACCTAAACATGGTTAGTCGTGATCAGAAGAAAAAAGTTAGTAAGGGTTTGGACAAAAGGGCATTGAAGACTTTTCCAGTGATTAAGTACTCAAATGAGGTAAAGATTCAAGGGTTAGATACAGATTGTGTGATATGTTTATCAGAGTTTAAGGGAGGAGAAAAAGTCAGGATATTACCAAAATGCCACCATGGCTTCCATGTTAAATGCATTGATGAATGGCTTAGTGCTCACTCCTCTTGCCCTACTTGCAGACAATCATTAGTTGAAACGTGTCAAAAGATCATTGGAACCCATGATGTTGATCATCAAACAACAACACCATCAACAACAACAACAACAACAACAACAACACCAACAACATCGTCAACATTCATGGAGGTGGTTGTA

mRNA sequence

ATGATGGCTTCAACTTCCTTTGCTTCTCTCCCTCAAGAAATAGTTAACAAACTTCACTATTCTAGAAGATTACTACTTCACTCCCCCTTTCAACCCTCACTACCTGTAACATCACAAGCACCAACACCAACCTACCAAGTCCTTGACCCGACTGGTACGACCCATGGCAATCCCGGGTTTGATGCTAACATAGTCATGATCCTCGCGGTATTGGTTTGCGCTCTAATCTGTTCTTTATGCATAAACACCTTCATTAGGTGTGTCATTAAGTGCTCTAGCATGATTACAGGGGAGCCTAATTACTACCTAAACATGGTTAGTCGTGATCAGAAGAAAAAAGTTAGTAAGGGTTTGGACAAAAGGGCATTGAAGACTTTTCCAGTGATTAAGTACTCAAATGAGGTAAAGATTCAAGGGTTAGATACAGATTGTGTGATATGTTTATCAGAGTTTAAGGGAGGAGAAAAAGTCAGGATATTACCAAAATGCCACCATGGCTTCCATGTTAAATGCATTGATGAATGGCTTAGTGCTCACTCCTCTTGCCCTACTTGCAGACAATCATTAGTTGAAACGTGTCAAAAGATCATTGGAACCCATGATGTTGATCATCAAACAACAACACCATCAACAACAACAACAACAACAACAACAACACCAACAACATCGTCAACATTCATGGAGGTGGTTGTA

Coding sequence (CDS)

ATGATGGCTTCAACTTCCTTTGCTTCTCTCCCTCAAGAAATAGTTAACAAACTTCACTATTCTAGAAGATTACTACTTCACTCCCCCTTTCAACCCTCACTACCTGTAACATCACAAGCACCAACACCAACCTACCAAGTCCTTGACCCGACTGGTACGACCCATGGCAATCCCGGGTTTGATGCTAACATAGTCATGATCCTCGCGGTATTGGTTTGCGCTCTAATCTGTTCTTTATGCATAAACACCTTCATTAGGTGTGTCATTAAGTGCTCTAGCATGATTACAGGGGAGCCTAATTACTACCTAAACATGGTTAGTCGTGATCAGAAGAAAAAAGTTAGTAAGGGTTTGGACAAAAGGGCATTGAAGACTTTTCCAGTGATTAAGTACTCAAATGAGGTAAAGATTCAAGGGTTAGATACAGATTGTGTGATATGTTTATCAGAGTTTAAGGGAGGAGAAAAAGTCAGGATATTACCAAAATGCCACCATGGCTTCCATGTTAAATGCATTGATGAATGGCTTAGTGCTCACTCCTCTTGCCCTACTTGCAGACAATCATTAGTTGAAACGTGTCAAAAGATCATTGGAACCCATGATGTTGATCATCAAACAACAACACCATCAACAACAACAACAACAACAACAACAACACCAACAACATCGTCAACATTCATGGAGGTGGTTGTA

Protein sequence

MMASTSFASLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPGFDANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSRDQKKKVSKGLDKRALKTFPVIKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAHSSCPTCRQSLVETCQKIIGTHDVDHQTTTPSTTTTTTTTTPTTSSTFMEVVV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06430.1Spo06430.1mRNA


Homology
BLAST of Spo06430.1 vs. NCBI nr
Match: gi|902238402|gb|KNA25176.1| (hypothetical protein SOVF_009380 [Spinacia oleracea])

HSP 1 Score: 419.1 bits (1076), Expect = 5.100e-114
Identity = 219/239 (91.63%), Postives = 224/239 (93.72%), Query Frame = 1

		  

Query: 1   MMASTSFA-SLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPG 60
           MM STSF  SLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPG
Sbjct: 1   MMPSTSFTNSLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPG 60

Query: 61  FDANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSRDQKKKVSKGLD 120
           FDANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSRDQKKKVSKGLD
Sbjct: 61  FDANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSRDQKKKVSKGLD 120

Query: 121 KRALKTFPVIKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAH 180
           KRALKTFPV+KYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAH
Sbjct: 121 KRALKTFPVVKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAH 180

Query: 181 SSCPTCRQSLVETCQKIIGTHDVDHQTTTPSTTTT-------TTTTTPTTSSTFMEVVV 232
           SSCPTCRQSLVETCQKIIG+  VDHQTTTPSTTTT       +TTTT T SST +EVV+
Sbjct: 181 SSCPTCRQSLVETCQKIIGS-GVDHQTTTPSTTTTPSTTSSSSTTTTTTPSSTSIEVVI 238

BLAST of Spo06430.1 vs. NCBI nr
Match: gi|902148989|gb|KNA05295.1| (hypothetical protein SOVF_191790 [Spinacia oleracea])

HSP 1 Score: 337.8 bits (865), Expect = 1.500e-89
Identity = 184/234 (78.63%), Postives = 199/234 (85.04%), Query Frame = 1

		  

Query: 1   MMASTSFASLPQEIVNKLHYSRRLLLHSPFQP-SLPVTSQAPTPTYQVL-DPTGTTHGNP 60
           MM + SF SLP+EI+N LHYSRRLLLH  FQ  S P TSQAPTPTY+VL DPTG   G P
Sbjct: 1   MMPTISFNSLPKEIINNLHYSRRLLLHPSFQQHSPPTTSQAPTPTYEVLEDPTG--RGKP 60

Query: 61  GFDANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSRD-QKKKVSKG 120
           G+DANI+MI AVLV ALICSLCINTFIRCV+K SSMITGEPNYYLNMVSR   KK+VS G
Sbjct: 61  GYDANIIMIFAVLVFALICSLCINTFIRCVLKWSSMITGEPNYYLNMVSRSGHKKRVSNG 120

Query: 121 LDKRALKTFPVIKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLS 180
           LDKRALKTFPV+KYSNEVKIQGL T+CVICL EFKGGEKVRILPKCHHGFHVKCIDEWLS
Sbjct: 121 LDKRALKTFPVVKYSNEVKIQGLGTECVICLCEFKGGEKVRILPKCHHGFHVKCIDEWLS 180

Query: 181 AHSSCPTCRQSLVETCQKIIGTHDVDHQTTTPSTTTTTTTTTPTTSSTFMEVVV 232
           AHSSCPTCRQSLVETCQKIIG    DHQTTT STTTT ++TT +T    +EVV+
Sbjct: 181 AHSSCPTCRQSLVETCQKIIGCGG-DHQTTTSSTTTTISSTTTST----IEVVI 227

BLAST of Spo06430.1 vs. NCBI nr
Match: gi|731338333|ref|XP_010680273.1| (PREDICTED: RING-H2 finger protein ATL78-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 323.6 bits (828), Expect = 2.900e-85
Identity = 170/232 (73.28%), Postives = 198/232 (85.34%), Query Frame = 1

		  

Query: 1   MMASTSFASLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPGF 60
           M+ STSF SLPQEI+ KLHYSRRLLL+SP   S P T+QAPTPTYQVLDP G++HG  GF
Sbjct: 1   MVPSTSFTSLPQEIITKLHYSRRLLLNSPIYIS-PPTNQAPTPTYQVLDP-GSSHGKNGF 60

Query: 61  DANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSR-DQKKKVSKGLD 120
           DANI+MILAVLVCAL+CSLCINTFIRCVIKCSSM++GEPNYYL+M++  D+KKK   GLD
Sbjct: 61  DANIIMILAVLVCALMCSLCINTFIRCVIKCSSMMSGEPNYYLSMINNHDEKKKSVNGLD 120

Query: 121 KRALKTFPVIKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAH 180
           KRALKTFPV+KYS +V+IQGL ++CVICLSEFK GEKVRILPKC+HGFHVKCIDEWLS+H
Sbjct: 121 KRALKTFPVVKYSKDVQIQGLGSECVICLSEFKEGEKVRILPKCNHGFHVKCIDEWLSSH 180

Query: 181 SSCPTCRQSLVETCQKIIGTHDVDHQTTTPSTTTTTTTTTPTTSSTFMEVVV 232
           S+CPTCRQSL ETCQKIIG  D DH TTT S+++ +      TSS+  +VVV
Sbjct: 181 STCPTCRQSLSETCQKIIGCDD-DHHTTTSSSSSAS-----LTSSSLRDVVV 224

BLAST of Spo06430.1 vs. NCBI nr
Match: gi|870857669|gb|KMT09217.1| (hypothetical protein BVRB_6g133190 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 318.9 bits (816), Expect = 7.100e-84
Identity = 166/232 (71.55%), Postives = 192/232 (82.76%), Query Frame = 1

		  

Query: 1   MMASTSFASLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPGF 60
           M  STSF SLPQ+I+  LHYSRRLLL+S    S P T+QA TPTYQVLDP G+ HG  GF
Sbjct: 1   MFPSTSFTSLPQQIITNLHYSRRLLLNSDIHSS-PPTNQALTPTYQVLDP-GSNHGKSGF 60

Query: 61  DANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSR-DQKKKVSKGLD 120
           DANI+MILAVLVCALICSLCINTFIRCVIKCS MITGEPNYYLNM++  D KKK   GLD
Sbjct: 61  DANIIMILAVLVCALICSLCINTFIRCVIKCSGMITGEPNYYLNMINNHDGKKKSVSGLD 120

Query: 121 KRALKTFPVIKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAH 180
           KRALKTFP++KYS +V+IQGL ++CVICLSEF GGEKVRILPKC+HGFHVKCID+WLS+H
Sbjct: 121 KRALKTFPIVKYSKDVQIQGLGSECVICLSEFNGGEKVRILPKCNHGFHVKCIDKWLSSH 180

Query: 181 SSCPTCRQSLVETCQKIIGTHDVDHQTTTPSTTTTTTTTTPTTSSTFMEVVV 232
           SSCPTCRQSLVETCQKIIG  D  H TT+P     T++++ + +++  EVVV
Sbjct: 181 SSCPTCRQSLVETCQKIIGCDDDHHTTTSP-----TSSSSSSAAASLREVVV 225

BLAST of Spo06430.1 vs. NCBI nr
Match: gi|731338331|ref|XP_010680272.1| (PREDICTED: RING-H2 finger protein ATL78-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 312.4 bits (799), Expect = 6.700e-82
Identity = 165/236 (69.92%), Postives = 196/236 (83.05%), Query Frame = 1

		  

Query: 1   MMASTSFASL-PQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPG 60
           M+ STSF S+ PQ I+  LHYSRRLLLH+      P TSQAPTPTYQVLDP G++HGN G
Sbjct: 1   MLPSTSFTSIIPQHIITNLHYSRRLLLHNS-----PTTSQAPTPTYQVLDP-GSSHGNNG 60

Query: 61  FDANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVS-RDQKKKVSKGL 120
           FDANI+MILAVLVCALICSLCINT IRCVIKCSS++ GEPNYYLNM++  D KKK   GL
Sbjct: 61  FDANIIMILAVLVCALICSLCINTCIRCVIKCSSLLNGEPNYYLNMINDHDGKKKSVSGL 120

Query: 121 DKRALKTFPVIKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSA 180
           DKRALKTFP++KYS +V+IQGL ++CVICLSEF GGEKVRILPKC+HGFHVKCID+WLS+
Sbjct: 121 DKRALKTFPIVKYSKDVQIQGLGSECVICLSEFNGGEKVRILPKCNHGFHVKCIDKWLSS 180

Query: 181 HSSCPTCRQSLVETCQKIIGTHDVDHQTTTPST---TTTTTTTTPTTSSTFMEVVV 232
           HSSCPTCRQSLVETCQKIIG     H TTT S+   +T+++++  ++S++  EVVV
Sbjct: 181 HSSCPTCRQSLVETCQKIIGCDHDHHHTTTLSSAALSTSSSSSASSSSASLREVVV 230

BLAST of Spo06430.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S099_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_009380 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 3.500e-114
Identity = 219/239 (91.63%), Postives = 224/239 (93.72%), Query Frame = 1

		  

Query: 1   MMASTSFA-SLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPG 60
           MM STSF  SLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPG
Sbjct: 1   MMPSTSFTNSLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPG 60

Query: 61  FDANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSRDQKKKVSKGLD 120
           FDANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSRDQKKKVSKGLD
Sbjct: 61  FDANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSRDQKKKVSKGLD 120

Query: 121 KRALKTFPVIKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAH 180
           KRALKTFPV+KYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAH
Sbjct: 121 KRALKTFPVVKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAH 180

Query: 181 SSCPTCRQSLVETCQKIIGTHDVDHQTTTPSTTTT-------TTTTTPTTSSTFMEVVV 232
           SSCPTCRQSLVETCQKIIG+  VDHQTTTPSTTTT       +TTTT T SST +EVV+
Sbjct: 181 SSCPTCRQSLVETCQKIIGS-GVDHQTTTPSTTTTPSTTSSSSTTTTTTPSSTSIEVVI 238

BLAST of Spo06430.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDG2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_191790 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.000e-89
Identity = 184/234 (78.63%), Postives = 199/234 (85.04%), Query Frame = 1

		  

Query: 1   MMASTSFASLPQEIVNKLHYSRRLLLHSPFQP-SLPVTSQAPTPTYQVL-DPTGTTHGNP 60
           MM + SF SLP+EI+N LHYSRRLLLH  FQ  S P TSQAPTPTY+VL DPTG   G P
Sbjct: 1   MMPTISFNSLPKEIINNLHYSRRLLLHPSFQQHSPPTTSQAPTPTYEVLEDPTG--RGKP 60

Query: 61  GFDANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSRD-QKKKVSKG 120
           G+DANI+MI AVLV ALICSLCINTFIRCV+K SSMITGEPNYYLNMVSR   KK+VS G
Sbjct: 61  GYDANIIMIFAVLVFALICSLCINTFIRCVLKWSSMITGEPNYYLNMVSRSGHKKRVSNG 120

Query: 121 LDKRALKTFPVIKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLS 180
           LDKRALKTFPV+KYSNEVKIQGL T+CVICL EFKGGEKVRILPKCHHGFHVKCIDEWLS
Sbjct: 121 LDKRALKTFPVVKYSNEVKIQGLGTECVICLCEFKGGEKVRILPKCHHGFHVKCIDEWLS 180

Query: 181 AHSSCPTCRQSLVETCQKIIGTHDVDHQTTTPSTTTTTTTTTPTTSSTFMEVVV 232
           AHSSCPTCRQSLVETCQKIIG    DHQTTT STTTT ++TT +T    +EVV+
Sbjct: 181 AHSSCPTCRQSLVETCQKIIGCGG-DHQTTTSSTTTTISSTTTST----IEVVI 227

BLAST of Spo06430.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C636_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g133170 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.000e-85
Identity = 170/232 (73.28%), Postives = 198/232 (85.34%), Query Frame = 1

		  

Query: 1   MMASTSFASLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPGF 60
           M+ STSF SLPQEI+ KLHYSRRLLL+SP   S P T+QAPTPTYQVLDP G++HG  GF
Sbjct: 1   MVPSTSFTSLPQEIITKLHYSRRLLLNSPIYIS-PPTNQAPTPTYQVLDP-GSSHGKNGF 60

Query: 61  DANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSR-DQKKKVSKGLD 120
           DANI+MILAVLVCAL+CSLCINTFIRCVIKCSSM++GEPNYYL+M++  D+KKK   GLD
Sbjct: 61  DANIIMILAVLVCALMCSLCINTFIRCVIKCSSMMSGEPNYYLSMINNHDEKKKSVNGLD 120

Query: 121 KRALKTFPVIKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAH 180
           KRALKTFPV+KYS +V+IQGL ++CVICLSEFK GEKVRILPKC+HGFHVKCIDEWLS+H
Sbjct: 121 KRALKTFPVVKYSKDVQIQGLGSECVICLSEFKEGEKVRILPKCNHGFHVKCIDEWLSSH 180

Query: 181 SSCPTCRQSLVETCQKIIGTHDVDHQTTTPSTTTTTTTTTPTTSSTFMEVVV 232
           S+CPTCRQSL ETCQKIIG  D DH TTT S+++ +      TSS+  +VVV
Sbjct: 181 STCPTCRQSLSETCQKIIGCDD-DHHTTTSSSSSAS-----LTSSSLRDVVV 224

BLAST of Spo06430.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C6M0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g133190 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.000e-84
Identity = 166/232 (71.55%), Postives = 192/232 (82.76%), Query Frame = 1

		  

Query: 1   MMASTSFASLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPGF 60
           M  STSF SLPQ+I+  LHYSRRLLL+S    S P T+QA TPTYQVLDP G+ HG  GF
Sbjct: 1   MFPSTSFTSLPQQIITNLHYSRRLLLNSDIHSS-PPTNQALTPTYQVLDP-GSNHGKSGF 60

Query: 61  DANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSR-DQKKKVSKGLD 120
           DANI+MILAVLVCALICSLCINTFIRCVIKCS MITGEPNYYLNM++  D KKK   GLD
Sbjct: 61  DANIIMILAVLVCALICSLCINTFIRCVIKCSGMITGEPNYYLNMINNHDGKKKSVSGLD 120

Query: 121 KRALKTFPVIKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAH 180
           KRALKTFP++KYS +V+IQGL ++CVICLSEF GGEKVRILPKC+HGFHVKCID+WLS+H
Sbjct: 121 KRALKTFPIVKYSKDVQIQGLGSECVICLSEFNGGEKVRILPKCNHGFHVKCIDKWLSSH 180

Query: 181 SSCPTCRQSLVETCQKIIGTHDVDHQTTTPSTTTTTTTTTPTTSSTFMEVVV 232
           SSCPTCRQSLVETCQKIIG  D  H TT+P     T++++ + +++  EVVV
Sbjct: 181 SSCPTCRQSLVETCQKIIGCDDDHHTTTSP-----TSSSSSSAAASLREVVV 225

BLAST of Spo06430.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLN7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_058500 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.200e-68
Identity = 135/137 (98.54%), Postives = 135/137 (98.54%), Query Frame = 1

		  

Query: 1   MMASTSFASLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPGF 60
           MMASTSFASLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPGF
Sbjct: 1   MMASTSFASLPQEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPGF 60

Query: 61  DANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSRDQKKKVSKGLDK 120
           DANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSRDQKKKVSKGLDK
Sbjct: 61  DANIVMILAVLVCALICSLCINTFIRCVIKCSSMITGEPNYYLNMVSRDQKKKVSKGLDK 120

Query: 121 RALKTFPVIKYSNEVKI 138
           RALKTFPVIKYSNE  I
Sbjct: 121 RALKTFPVIKYSNETII 137

BLAST of Spo06430.1 vs. ExPASy Swiss-Prot
Match: ATL78_ARATH (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.200e-40
Identity = 93/221 (42.08%), Postives = 136/221 (61.54%), Query Frame = 1

		  

Query: 12  QEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPGFDANIVMILAVL 71
           QEI+    YSR+LL H+  Q   P    AP+P            G+  FDAN+VM+L+VL
Sbjct: 19  QEILGS-SYSRKLLFHTHDQSPTP----APSPYV----------GDNNFDANVVMVLSVL 78

Query: 72  VCALICSLCINTFIRCVIKCSSMITGEP---NYYLNMVSRDQKKKVSKGLDKRALKTFPV 131
           +CAL+CSL +N+ IRC ++CS+++  E    NY + + +         G+ ++ALK+F  
Sbjct: 79  LCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNT--------GVKRKALKSFQT 138

Query: 132 IKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAHSSCPTCRQS 191
           + YS E+ + GLDT+C ICLSEF   E+V++LP CHHGFHV+CID+WLS+HSSCPTCR  
Sbjct: 139 VSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHC 198

Query: 192 LVETCQKIIGTHDVDHQTTTPSTTTTTTTTTPTTSSTFMEV 230
           L++TC+KI             S T++  +T P   S  +++
Sbjct: 199 LIQTCEKIADC----------SQTSSLNSTQPPQDSIILQI 206

BLAST of Spo06430.1 vs. ExPASy Swiss-Prot
Match: ATL76_ARATH (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.900e-38
Identity = 86/193 (44.56%), Postives = 122/193 (63.21%), Query Frame = 1

		  

Query: 21  SRRLLLHSPFQP-SLPVTSQAPTPTYQVLDPTGTTHGNPGFDANIVMILAVLVCALICSL 80
           +R+LLLH PF   SL V + AP+P          TH N     N++M+L+VL+C +IC L
Sbjct: 23  TRKLLLHDPFDHNSLRVFAVAPSPLI--------THEN-NLKGNVLMLLSVLICGIICCL 82

Query: 81  CINTFIRCVIKCSS-MITGEPNYYLNMVSRDQKKKVSKGLDKRALKTFPVIKYSNEVKIQ 140
            ++  IRC  + SS  +  EP   L+      +   +KG+ K+AL+ FPV+ YS E+ + 
Sbjct: 83  GLHYIIRCAFRRSSRFMISEPISSLST----PRSSSNKGIKKKALRMFPVVSYSREMNLP 142

Query: 141 GLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAHSSCPTCRQSLVETCQKIIG 200
           G+  +CVICLS+F  GE++R+LPKC+HGFHV+CID+WL  H +CP CR  LVETCQKI+G
Sbjct: 143 GIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQKILG 202

Query: 201 T-HDVDHQTTTPS 211
                D   +TP+
Sbjct: 203 DFSQADSMASTPT 202

BLAST of Spo06430.1 vs. ExPASy Swiss-Prot
Match: ATL75_ARATH (RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.200e-36
Identity = 89/221 (40.27%), Postives = 129/221 (58.37%), Query Frame = 1

		  

Query: 2   MASTSFASLPQEIVNKLHYSRRLLLHSPFQPSLP-VTSQAPTPTYQVLDPTGTTHGNPGF 61
           +AS+S  +  ++ +     SR+LLLH+PF  +     + AP+P          TH N   
Sbjct: 6   LASSSVQAFQEQSLGGF-VSRKLLLHNPFDHNTQRAFAVAPSPLI--------THEN-NL 65

Query: 62  DANIVMILAVLVCALICSLCINTFIRCVIK-CSSMITGEPNYYLNMVSRDQKKKVSKGLD 121
             N++M+L+VL+C +IC L ++  IRC  +  SS +  EP   L+          +KG++
Sbjct: 66  SGNVLMLLSVLICGIICCLGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSS----NKGIN 125

Query: 122 KRALKTFPVIKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAH 181
           K+AL+ FPV+ YS E+ + GL  +CVICLS+F  GE++R+LPKCHHGFHV+CID+WL  H
Sbjct: 126 KKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQH 185

Query: 182 SSCPTCRQSLVETCQKIIGTHDVDHQTTTPSTTTTTTTTTP 221
            +CP CR  LVETCQKI+G      Q     T +      P
Sbjct: 186 LTCPKCRHCLVETCQKILGDFSQADQVAATPTASVIVRIAP 212

BLAST of Spo06430.1 vs. ExPASy Swiss-Prot
Match: ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.000e-35
Identity = 86/213 (40.38%), Postives = 126/213 (59.15%), Query Frame = 1

		  

Query: 21  SRRLLLHSPFQPSLP-VTSQAPTPTYQVLDPTGTTHGNPGFDANIVMILAVLVCALICSL 80
           SR+LLLH+PF  +     + AP+P          TH N     N++M+L++L+C +IC L
Sbjct: 23  SRKLLLHNPFDHNTQRAFAVAPSPLI--------THEN-NLSGNVMMLLSILICGIICCL 82

Query: 81  CINTFIRCVIKCSS-MITGEPNYYLNMVSRDQKKKVSKGLDKRALKTFPVIKYSNEVKIQ 140
            ++  IRC ++ S+  +  EP   L+      +   +KG+ K+AL+ FPV+ YS E+ + 
Sbjct: 83  GLHYIIRCALRRSTRFMISEPVPSLSST----RGSSNKGIKKKALRMFPVVSYSPEMNLP 142

Query: 141 GLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAHSSCPTCRQSLVETCQKIIG 200
           GLD +CVICLS+F  GE++R+LPKC+HGFHV+CID+WL  H +CP CR  LVETCQKI+G
Sbjct: 143 GLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILG 202

Query: 201 THDVDHQTTTPSTTTTTTTTTPTTSSTFMEVVV 232
                   T   T     T  P   +  + V +
Sbjct: 203 DFSQADSVTAEPTEIVIVTIVPLEPTEIVIVTI 222

BLAST of Spo06430.1 vs. ExPASy Swiss-Prot
Match: ATL73_ARATH (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.300e-34
Identity = 79/169 (46.75%), Postives = 105/169 (62.13%), Query Frame = 1

		  

Query: 23  RLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPGFDANIVMILAVLVCALICSLCIN 82
           R LL +   P++  T   P     + D           D ++V+ILA L+CALIC+L IN
Sbjct: 3   RFLLATQATPTISATDANPRT---LGDSVSNNKNIASMDTHMVIILAALLCALICALGIN 62

Query: 83  TFIRCVIKCSSMITGEPNYYLNMVSRDQKKKVSKGLDKRALKTFPVIKYSNEVKIQGLDT 142
           + +RCV++C+   T       N    D    V+KG+ KRALK  PV  YS E+K++   T
Sbjct: 63  SVLRCVLRCTRRFTP------NEDPVDTNANVAKGIKKRALKVIPVDSYSPELKMKA--T 122

Query: 143 DCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAHSSCPTCRQSLVE 192
           +C+ICL +F  GE VR+LPKC+HGFHVKCID WL +HSSCPTCRQSL+E
Sbjct: 123 ECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLE 160

BLAST of Spo06430.1 vs. TAIR (Arabidopsis)
Match: AT1G49230.1 (RING/U-box superfamily protein)

HSP 1 Score: 167.2 bits (422), Expect = 1.200e-41
Identity = 93/221 (42.08%), Postives = 136/221 (61.54%), Query Frame = 1

		  

Query: 12  QEIVNKLHYSRRLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPGFDANIVMILAVL 71
           QEI+    YSR+LL H+  Q   P    AP+P            G+  FDAN+VM+L+VL
Sbjct: 19  QEILGS-SYSRKLLFHTHDQSPTP----APSPYV----------GDNNFDANVVMVLSVL 78

Query: 72  VCALICSLCINTFIRCVIKCSSMITGEP---NYYLNMVSRDQKKKVSKGLDKRALKTFPV 131
           +CAL+CSL +N+ IRC ++CS+++  E    NY + + +         G+ ++ALK+F  
Sbjct: 79  LCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNT--------GVKRKALKSFQT 138

Query: 132 IKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAHSSCPTCRQS 191
           + YS E+ + GLDT+C ICLSEF   E+V++LP CHHGFHV+CID+WLS+HSSCPTCR  
Sbjct: 139 VSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHC 198

Query: 192 LVETCQKIIGTHDVDHQTTTPSTTTTTTTTTPTTSSTFMEV 230
           L++TC+KI             S T++  +T P   S  +++
Sbjct: 199 LIQTCEKIADC----------SQTSSLNSTQPPQDSIILQI 206

BLAST of Spo06430.1 vs. TAIR (Arabidopsis)
Match: AT1G49210.1 (RING/U-box superfamily protein)

HSP 1 Score: 159.1 bits (401), Expect = 3.300e-39
Identity = 86/193 (44.56%), Postives = 122/193 (63.21%), Query Frame = 1

		  

Query: 21  SRRLLLHSPFQP-SLPVTSQAPTPTYQVLDPTGTTHGNPGFDANIVMILAVLVCALICSL 80
           +R+LLLH PF   SL V + AP+P          TH N     N++M+L+VL+C +IC L
Sbjct: 23  TRKLLLHDPFDHNSLRVFAVAPSPLI--------THEN-NLKGNVLMLLSVLICGIICCL 82

Query: 81  CINTFIRCVIKCSS-MITGEPNYYLNMVSRDQKKKVSKGLDKRALKTFPVIKYSNEVKIQ 140
            ++  IRC  + SS  +  EP   L+      +   +KG+ K+AL+ FPV+ YS E+ + 
Sbjct: 83  GLHYIIRCAFRRSSRFMISEPISSLST----PRSSSNKGIKKKALRMFPVVSYSREMNLP 142

Query: 141 GLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAHSSCPTCRQSLVETCQKIIG 200
           G+  +CVICLS+F  GE++R+LPKC+HGFHV+CID+WL  H +CP CR  LVETCQKI+G
Sbjct: 143 GIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQKILG 202

Query: 201 T-HDVDHQTTTPS 211
                D   +TP+
Sbjct: 203 DFSQADSMASTPT 202

BLAST of Spo06430.1 vs. TAIR (Arabidopsis)
Match: AT1G49200.1 (RING/U-box superfamily protein)

HSP 1 Score: 153.3 bits (386), Expect = 1.800e-37
Identity = 89/221 (40.27%), Postives = 129/221 (58.37%), Query Frame = 1

		  

Query: 2   MASTSFASLPQEIVNKLHYSRRLLLHSPFQPSLP-VTSQAPTPTYQVLDPTGTTHGNPGF 61
           +AS+S  +  ++ +     SR+LLLH+PF  +     + AP+P          TH N   
Sbjct: 6   LASSSVQAFQEQSLGGF-VSRKLLLHNPFDHNTQRAFAVAPSPLI--------THEN-NL 65

Query: 62  DANIVMILAVLVCALICSLCINTFIRCVIK-CSSMITGEPNYYLNMVSRDQKKKVSKGLD 121
             N++M+L+VL+C +IC L ++  IRC  +  SS +  EP   L+          +KG++
Sbjct: 66  SGNVLMLLSVLICGIICCLGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSS----NKGIN 125

Query: 122 KRALKTFPVIKYSNEVKIQGLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAH 181
           K+AL+ FPV+ YS E+ + GL  +CVICLS+F  GE++R+LPKCHHGFHV+CID+WL  H
Sbjct: 126 KKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQH 185

Query: 182 SSCPTCRQSLVETCQKIIGTHDVDHQTTTPSTTTTTTTTTP 221
            +CP CR  LVETCQKI+G      Q     T +      P
Sbjct: 186 LTCPKCRHCLVETCQKILGDFSQADQVAATPTASVIVRIAP 212

BLAST of Spo06430.1 vs. TAIR (Arabidopsis)
Match: AT1G49220.1 (RING/U-box superfamily protein)

HSP 1 Score: 148.7 bits (374), Expect = 4.500e-36
Identity = 86/213 (40.38%), Postives = 126/213 (59.15%), Query Frame = 1

		  

Query: 21  SRRLLLHSPFQPSLP-VTSQAPTPTYQVLDPTGTTHGNPGFDANIVMILAVLVCALICSL 80
           SR+LLLH+PF  +     + AP+P          TH N     N++M+L++L+C +IC L
Sbjct: 23  SRKLLLHNPFDHNTQRAFAVAPSPLI--------THEN-NLSGNVMMLLSILICGIICCL 82

Query: 81  CINTFIRCVIKCSS-MITGEPNYYLNMVSRDQKKKVSKGLDKRALKTFPVIKYSNEVKIQ 140
            ++  IRC ++ S+  +  EP   L+      +   +KG+ K+AL+ FPV+ YS E+ + 
Sbjct: 83  GLHYIIRCALRRSTRFMISEPVPSLSST----RGSSNKGIKKKALRMFPVVSYSPEMNLP 142

Query: 141 GLDTDCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAHSSCPTCRQSLVETCQKIIG 200
           GLD +CVICLS+F  GE++R+LPKC+HGFHV+CID+WL  H +CP CR  LVETCQKI+G
Sbjct: 143 GLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILG 202

Query: 201 THDVDHQTTTPSTTTTTTTTTPTTSSTFMEVVV 232
                   T   T     T  P   +  + V +
Sbjct: 203 DFSQADSVTAEPTEIVIVTIVPLEPTEIVIVTI 222

BLAST of Spo06430.1 vs. TAIR (Arabidopsis)
Match: AT5G05280.1 (RING/U-box superfamily protein)

HSP 1 Score: 147.1 bits (370), Expect = 1.300e-35
Identity = 79/169 (46.75%), Postives = 105/169 (62.13%), Query Frame = 1

		  

Query: 23  RLLLHSPFQPSLPVTSQAPTPTYQVLDPTGTTHGNPGFDANIVMILAVLVCALICSLCIN 82
           R LL +   P++  T   P     + D           D ++V+ILA L+CALIC+L IN
Sbjct: 3   RFLLATQATPTISATDANPRT---LGDSVSNNKNIASMDTHMVIILAALLCALICALGIN 62

Query: 83  TFIRCVIKCSSMITGEPNYYLNMVSRDQKKKVSKGLDKRALKTFPVIKYSNEVKIQGLDT 142
           + +RCV++C+   T       N    D    V+KG+ KRALK  PV  YS E+K++   T
Sbjct: 63  SVLRCVLRCTRRFTP------NEDPVDTNANVAKGIKKRALKVIPVDSYSPELKMKA--T 122

Query: 143 DCVICLSEFKGGEKVRILPKCHHGFHVKCIDEWLSAHSSCPTCRQSLVE 192
           +C+ICL +F  GE VR+LPKC+HGFHVKCID WL +HSSCPTCRQSL+E
Sbjct: 123 ECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLE 160

The following BLAST results are available for this feature:
BLAST of Spo06430.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902238402|gb|KNA25176.1|5.1e-11491.6hypothetical protein SOVF_0093... [more]
gi|902148989|gb|KNA05295.1|1.5e-8978.6hypothetical protein SOVF_1917... [more]
gi|731338333|ref|XP_010680273.1|2.9e-8573.2PREDICTED: RING-H2 finger prot... [more]
gi|870857669|gb|KMT09217.1|7.1e-8471.5hypothetical protein BVRB_6g13... [more]
gi|731338331|ref|XP_010680272.1|6.7e-8269.9PREDICTED: RING-H2 finger prot... [more]
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BLAST of Spo06430.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S099_SPIOL3.5e-11491.6Uncharacterized protein OS=Spi... [more]
A0A0K9QDG2_SPIOL1.0e-8978.6Uncharacterized protein OS=Spi... [more]
A0A0J8C636_BETVU2.0e-8573.2Uncharacterized protein OS=Bet... [more]
A0A0J8C6M0_BETVU5.0e-8471.5Uncharacterized protein OS=Bet... [more]
A0A0K9RLN7_SPIOL2.2e-6898.5Uncharacterized protein OS=Spi... [more]
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BLAST of Spo06430.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ATL78_ARATH2.2e-4042.0RING-H2 finger protein ATL78 O... [more]
ATL76_ARATH5.9e-3844.5E3 ubiquitin-protein ligase AT... [more]
ATL75_ARATH3.2e-3640.2RING-H2 finger protein ATL75 O... [more]
ATL10_ARATH8.0e-3540.3RING-H2 finger protein ATL10 O... [more]
ATL73_ARATH2.3e-3446.7RING-H2 finger protein ATL73 O... [more]
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BLAST of Spo06430.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G49230.11.2e-4142.0RING/U-box superfamily protein[more]
AT1G49210.13.3e-3944.5RING/U-box superfamily protein[more]
AT1G49200.11.8e-3740.2RING/U-box superfamily protein[more]
AT1G49220.14.5e-3640.3RING/U-box superfamily protein[more]
AT5G05280.11.3e-3546.7RING/U-box superfamily protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 143..186
score: 3.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 144..185
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 144..186
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 141..190
score: 2.7
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 20..41
score: 1.1E-52coord: 57..211
score: 1.1
NoneNo IPR availablePANTHERPTHR14155:SF106SUBFAMILY NOT NAMEDcoord: 20..41
score: 1.1E-52coord: 57..211
score: 1.1
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 123..191
score: 6.06

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
RNA-Seq Expression
   



Co-expression