Spo06453 (gene)

Overview
NameSpo06453
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 18329624 .. 18334203 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCCATACTTTCTTGCCATATTTGAGAAGCCGTACGTAATCCACCCTGAAAATATTATAAATGAGAATGGTGTTGCTTCCTTGACAAGAATATGCGTAAGCAAAACCATAAAACGTTAAGAAAAAAAAAAAAAAAAAAGTAATGGAAGTTTGGGTATTGTGACTGAGAGAAAAATGCCAAAGATGGAAGGGAAATTGGTACTCTAAATTTGTCCTTTTTAGATGAAATAAACACAACAATCCACCAAATATATGGGAGGCTTTCTTTGGTGGAACTTGCTTCAAATTTTGGAAACATACTTCTATTTGACCATCTTCCTTTGACTTGGAGGTTTATAAGTTTATACTATTAATCTAGTGCGTAGTATATTATTAGTTTATTACTCTGTATCGTTAATAATGTTATACATAAATATTAAGGGTATAATTCGCATGTGAGTGTTAAAATCAGTCATCTCATGTTAGACGAATAAAGTGAGATTGATTAACATACAAGATTGGTGAGTTATTTCAAATTCTTCTTCAGCTTAGGGCTCGATTTGACCCAATAAAATTTATGGATACATGCCGATCGCAGACAAAATAATTGAGGGAGAAATTAATAATAGTGATTTTTTTGGATCCCCTTACCAGCTACACCATTTATTACCGTTACAGCCGGAGAAGGAGCATTAAGTACCATAATTATAGAAATATAACTCAAATATGGGCACATGAATAATAACGCTGACATGGTGTGGTTGTAATCTAATCCTATTTCTTATTAGTAATAACTAGCTTTTGAGCCCGTTCTTTATGGTTATTTAATCACCTTTTTAAGTTTTAATTTTATTGAGCTTGTGATTTTAGTGAAAATATATGATTTAAATAGAGGTAGAATTTAAAGGTTGAAATAGTAAATAAATTAAATAGTAAATTAATATTGAGTGTTAAAGGGGGAGATGTAGTGGAAGATGTTAAATGAGTAAATTGGTGAATTGATGTTGTACGTGGAAAATGAAGTAGAAGAGGCGATTAGAATTATAAAATAAAGAAAACAACAAAAAAAAGTTGAAGAAAATTACCAAATGAGATGGAGGAAAGAAGAAATGACACGTATCTGATCAAATATATGGTTTTACTTTTTAAATACTAGGTATAGATGTGGGGGAAAAAAATGATTAAATGATCACCTATAATATATGTGCGCACTTATATTTATAAAACTTCAAAAACTAGATATTTGAATGCTATAGGTTGATAATAAGTAATTGTATAATCAAGTTGCCTTTTTTTTATCTTTTTTTTTTTAATATGTAGTAGTAATTGTTACGAAATAAAGCAATTAGAACAACTTATCTTGATAAAATTAGAAAGTACCCGATCGCTTGCGGTTGTCGTGAAGCCCAAGCTCGACCCAGCTAGCGCGCATGTATATACGGAGTATAAATAAAGGAAGAACTTGATATTCTACCACATCCCATTTTCTTAAACACTCAACTCATGGGAGAAAAGTAGCACTCAACTCAAACGAATTTTTGTGTTTTCTGCCCTTTTGTTTTTGGAAATAGTAAAATACTAGATTAGATCCCGTGCACGCACGGATATATAAAATTATTATTTGATCATTTTTTGTATAAAAATGTTTAACTGTCTATTTCTCGTTATAAAGAAAATGCATAATAAATATGTCAGTTGCATACTCATTTAATCAATTAATATGCAATTTTCGTCCTACTACGTATTACATATTTTATATGCTTAATATGCTAATTTGATCAAAATATTAAATAAAAAATACTTTTTCCATTTGATATATACCTATTTGACTAAAATATTACCAAAATCATTTTAAGCAAATTATTATTATGTGGTATCTATTAGTTGCCCTATTCTATATTCCAATATATTTTTTCCATATGTAAACAGTTTATAAAAAAAAGGGAGAAAATAAAAATGAAATAAAGTAGATATATTTTTAGGAAAAAGAAATTGGAGAAATTTTTTTGCGTCAGGAAGTGACACATCCCGTGGGCTCGACCCGAAGCCCGACCGACCCGGCCCACGGCCATCTTTAGAATTACGTAGTTGATAGATTAGATTACGCAATTTTTGCTCATGTTTAAGGAAGTTACATACTTTTTTTAAAGTAGTAAAATATTACTATCATATCAATGGCGGTGGTAATTATCGAACTTAGTTGCTAAATATAATATGTCTAAAATATAAAATAGTACAATCATTGGAGGCTATAAATATCGAATTTAGTTGTTAAAATTTTATAGAGTACTAGTAACTTTTTGTATACACTCTATACATATTGTATTGGTTTTTTAATTTGTTTGTATTCTAATATATTATGTAATCGGTAGATTACTGTCAGCTTTTTTTTTTAATAAATATCCTACTACGTACTCCATATAATGGACTAATTTTTTATAAAAAGATAAGCACATTGGTTATATTTGTTAACAAAATATAGAAAAGATTTTACAAAATATTCCCCAGGTATAGAATAATATCTTTTTTTAGGAAAATAGAATCAAAACTTTATAAAGTGAAAGTTAACAAAATAAACTTTTTGTATAATTTTTTTATATCTATAAGAGAGGCCAATCAATGAGTGACATTTGTCATCACCACATTGATTTCCTCTCTTTTAGTATAATATATAGATAGATAGATACGAGTAGATTTTAAGCAAATTATTATTATGCGGTATCTATTAGTTGCCATATTCTATATTCCAACATATTTTTTCCATATGTAAACTGTTTATAGAAAAAGGGAGGAAAAAAAGCAATAAGTAGATATATTTTTAGAAAAAAAAAATGGCGGGAAAATTTTGCACCAGGAAATGATACGTGTCACTTCCGATGTCTGATTTAGTATAATGTAATTGATTACTCCGTAGTAGGAAAATAGATAGCGATTAGCCAATGAATTCAACATAATTTTTGCTAATTCCTTAACTATGTTAACGGGAAAATGGTTTTTACATCCTGTACAATACACATTGTAGATAGACGAAGTATTGTGTACGTTAACATACTTAATTAAGCCATCAATAATCTCATTACCTGTTTTCTACTTAGATTAAGGAGCATAACTTCTTTTTCTAATTCCACGTGGCACTAAGTTAGTTAGGGAGCACACTCATTGCTTTCTGGTTTCTACTATGTCCTATAGTTGTAGAAGAAAAACAGTTAAATACTTGTATATACTTAGGGATGGAAATCTGTAAAGCAAAGAAAGAACTATCTAAAAAAGCCTTGCATAATGTTCATGTACTCTGGCTATTTTATTAGAGTAATCTTTATTTTCTTAAATTTGTAAATGTAAAATAAGTTTTAATGATTCGTCGAATTGTATTGTTGTATTTACTTCTTATTAAGTGATAAACAATATGAGTGGATTGTACATGCAATCATATACAAAATATTCATTTTTTTTAAAATTAGGTAAGAATAATTGCCTTACTCGAACAGCTATCTTGGATTAATCAGCTTAGTTACACATATCTACACTTGAACCACTCCCAAACATTTCGTAGCTGGCGATCTCGACTCTGTAACCTACGAAGTCAAAAGGTGAATTTCCCACTAATTCCACCAACTTATATTGGTTACGAAATATTCATATTACAGGACAATTAATGGACAAATTTGGTTTTAGCAATACTAAAGTCAATTGTTACTTTGTACTAGACCATTATATAAAGTACTCATTCGTTTCCCTATTAAGTAGTTCAGTTGATAAGTAAGGGGTCAAGTTTAGAAATGTACGGCGTATCAAAGGTTCAAACCTTGTAAACACAACCCCTTATAAACTGATCAATTGAAACACATGTTGCGACTTATCTCCTCCATGATGGTCGAGTGGCCGGACAACGAGGCTTAAGGGCCAGGGTTTCAGCTATTTGGGATTACTTGAAATCCATATTCCAAAATTAAACAACAGATATAAAACTAAAAAGAAAAGACAGCATTAAAATAAAGCAAAGTAGTACTTGATGATGGTGGTGCTTCAAGAAAAAAATTAATGCTCCTTTTTGTTAACTCAATGGTGGTGGCAGATGAAATGCATAAATAAAATCATTAAAAGTGGAGGATTCAAGTTGGGGAGAAGAGGTAATTTAATTAGGTTGGTGTGCTCTCATTAATTTAGGTCTACCCTACTCCTATTAGACTATTTCCCTTTAAATATATTGCCTTTCTTTCAATTCACATTTCCCTCCTTTTTTTCTCTTTTCTTTTTTCTTGGTACAAATTTATTAAAACCACACTCAAAAAAACAAGAAAGAAATCAAAACTCCAAAAAAAAAAAAAAAANAAATTTATTAAAACCACACTCAAAAAAACAAGAAAGAAATCAAAACTCCAAAAAAAAAAAAAAAAAAAACCCAAATATTAATTGGAAAAACAGAGAGGTTTAAATATTTGGATGATATATATGACTCCAATGCAAGCAATATCAGTAATCATGATCTATCTGTCCTTGTTCAAACCATAGAAGTTTCTTCCAAATTTATTTCATTTTCCAGTTTTTGCACCCACCCTTCTTCATTTCTCCCCTACATTACTATTCTAGAGAGATAA

mRNA sequence

ATGTCTCCATACTTTCTTGCCATATTTGAGAAGCCGTACGTAATCCACCCTGAAAATATTATAAATGAGAATGGTGTTGCTTCCTTGACAAGAATATGCATGAAATGCATAAATAAAATCATTAAAAGTGGAGGATTCAAGTTGGGGAGAAGAGAGAGGTTTAAATATTTGGATGATATATATGACTCCAATGCAAGCAATATCAGTAATCATGATCTATCTGTCCTTGTTCAAACCATAGAAGTTTCTTCCAAATTTATTTCATTTTCCAGTTTTTGCACCCACCCTTCTTCATTTCTCCCCTACATTACTATTCTAGAGAGATAA

Coding sequence (CDS)

ATGTCTCCATACTTTCTTGCCATATTTGAGAAGCCGTACGTAATCCACCCTGAAAATATTATAAATGAGAATGGTGTTGCTTCCTTGACAAGAATATGCATGAAATGCATAAATAAAATCATTAAAAGTGGAGGATTCAAGTTGGGGAGAAGAGAGAGGTTTAAATATTTGGATGATATATATGACTCCAATGCAAGCAATATCAGTAATCATGATCTATCTGTCCTTGTTCAAACCATAGAAGTTTCTTCCAAATTTATTTCATTTTCCAGTTTTTGCACCCACCCTTCTTCATTTCTCCCCTACATTACTATTCTAGAGAGATAA

Protein sequence

MSPYFLAIFEKPYVIHPENIINENGVASLTRICMKCINKIIKSGGFKLGRRERFKYLDDIYDSNASNISNHDLSVLVQTIEVSSKFISFSSFCTHPSSFLPYITILER
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06453.1Spo06453.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo06453.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06453.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06453.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06453.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016556 mRNA modification
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0010207 photosystem II assembly
biological_process GO:0006457 protein folding
biological_process GO:0009658 chloroplast organization
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0048868 pollen tube development
biological_process GO:0019760 glucosinolate metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0016020 membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0009523 photosystem II
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0043621 protein self-association
RNA-Seq Expression