Spo06634 (gene) | SpinachBase

Overview


Name	Spo06634
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Ribosomal protein L19
Location	SpoScf_02028 : 30901 .. 34061 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCAAGAAGTGAACGAATCAATCCATTGTTGAACAAAATCGTACCAAAAGCCCAACCCAATAACCCAATAAAAAAAAGTCGGGTATAACCCCTAATCCCCAAACCCTAGCTCTAAAAACTGGTGGTATTTAAACCTTATCTTTCCCATTTCTCACCTTCTCGCAGCTCCACTTCACAGAGAGAGGAGAGGGAGAGAGGAGAGGAGAGGAGAGAGAAAACTTAAAAATGGTGTCTTTGAAGCTTCAGAAGCGGCTCGCCGCCGATATCCTCAAGTGTGGTCGTGGCAAGGTCTGGCTTGATCCTAATGAAGGAAATGAAATTTCCATGGCTAATTCCCGTACGTATTTCTCCCTCTTCGATTTCGTATTACTTCTAGATTTCTATGATATGTTATTTTATGTGGAATTGTTATCAATCGATTGTTAGATTTTGTTGTTGTTCTTCAATTTTTTGATAATTAGAAACTAAGGAATTCATACTCTAGGTTGACGTTGCTGATTTATAATTCCTTCCTTATTTTTCTTAAAAAATGATGTGTAAATGGAAGCTTTTGATGTTTTGTCATGTAATTGTAGTCGGTGTTTGAGCGAGATCGTAAATTTTGTGATTCTATTGATTGATTAATTTAATTACAGATTAGGACTTCAAGTGTTAACTTTTGAACTTCAAATATTGATACAGCTGCTACTTTCCCGATTAAATCGAATTTGAGTTTGCGATGAACTATGTTAATTGTTAAATCAAAGTTAATTTCGTGTTATGATGATTGTTATTGATGTATTATATTATGTGAATGATGTTTTCGTTTGCTGATTGAAGAATTTTGTTCGATTACAATTTTTAGGCCAAAACATCAGGAAGCTTGTTAAGGATGGGTTTATCATCAGGAAGCCTACCAATATTCATTCCAGGTCTCGAGCTCGTCGTATGAATGAGGCCAAGAGGAAGGGTCGTCACTCTGGATACGGTATGCATACCAAATAATTTGTGTAATTGTTTTTAATCATAGAAATTGGTGATTTTCCAACCTTTTTAGTAGCTCATGTGAATGAAGCTCCTTAATCCAAGTAGATTAGTAATGGCATTCTGTATGATCATGTGGCAAGCATTTAGAAAATCTTTTGGCAGGGACACCTCAAACAAGTTGGTAGCTTTTCATGTTAGGCAGATTAGTGATTAGCATCCTGTGATCAAGTGGCAAGCATTCAGCATTCTTGTGATCTTTCTATTGAAGTATGTGATGCTGGCTACTCGGTAATCAGTTAGTTGGATGATTCTCTTGAATGATAACAGATACCAAATAATTTGTGTAATTGTTTTTAATCATAGAAATTGGTGATTTTCCAACTTTTAGTAGCTCATGTGAATGAAGCTCCTTAATCTAAGTAGATTAGTAATGGCATTCTGTATGATCATGTGGCAAACATTTAGAAAATCTTTTGGCAGTGACACCTCAAACAAGTTGGTAGCTTCTCATGTTAGGCAGACTAGTGATTAGCATTTTGAAAGATCAAGTGGCAATCATTCAGCATTCTTGTGATCTTTCTATTGAAGTATTAATCAGTTAGTTGGACGATTCTCTGGAATGATAACAGATGCCTGATTCGAGTATAGAGATTGATGAAATCATGTAATTATGCAATATCAATAATCTTAGAACTTGATTGATTACAGGTAAACGTAAGGGTACCAGGGAGGCTAGGCTTCCAACAAAGGTTTTGTGGATGAGGAGGATGAGAGTTCTTAGGAGGTTGCTCTGTAAGTACCGAGAGTCAAAGAAGATTGACAAGCACATGTACCATGACATGTACATGAAGGTCAAGGGTAATGTCTTTAAGAATAAGAGAGTATTGATGGAGAGCATTCACAAAACCAAGGCTGAGAAGGCTAGAGACAAGACCTTATCTGACCAATTTGAGGCTAAACGTGCTAAGAACAAGGCTAGCAGGGAGAGGAAACTCGCCAGAAGAGAAGAGCGTTTTGCACAGGTAAAATCGTCTTCTATATTATTGGTTTACTATTTTGATTTTCTTGTCGCAATCTTCATTCGTTATCATTACCCCCATTACCTCAAAGAGGTTCCTGCAAAAAGCGGGGTAAGGAGGTCGGATGTACGCAACCTTATTACCCCTACAATTGTAGAGAGGTTGTTTCCAATTGAGCTAGAAGCGATAACGGGACGACAATGGAACTACCATCTCCTACTTCATGTAAAGGAAGCAAAATGATTCAGGCCATTACATCCCACAACCAAACAAACAAATGAATCTTTTGTGTCTGCCAATCTTTTTTTGGGGATTTTGTGTCTGCCAATCTTCTTTAGCCAAATAAACAAATGAATCTTTGATTTTCTTGTTGCAATCTACTTGCTTATTATTTGTGTCTGCCAATCTTCTTCAGGGACCTGGTGGTGAAGCACCCACACCTGTAGCAGCTGCAGTACCAGAAGCTGTTCCAAAACAAACACAGTAAGTTGATTTTGTTGCTGTCTGTTCCATAAGTTTCAGTAGTTAGCACAACTTATGTCCAATTCTACGAATGTATGATTTACTTAAAAGTGTCGTCTAAACTCACTCCACAGGCCAAAGAAAGCAAAGAAGTGAAGCGATAGTGGTTGAGACCTGACAAGGAAGGCTAGGGTGGTCTATGGACCTGGTTGTTTTGTAGCATAGTAGTACCTTTTTTGCAGCTAATATGTTTCGTGGATCTTGTTATGTTGCGACTGAGATAGAGATTTTTGATAATCCTGATACTCGGTTTGAAATGTACTACTTTTTTTTTCACATGTTAATTTTGGTTTCTTATTTTCCAGTTGTTTAGAGCAAATGTAGTATTAGTTGCTAAGATATACAGTAAAATGCAAGGAAAGCCCTCATTTCACATGGTCAACCGAAAAGAAATCTAGATTTTTTGTCAAATCTAAAATGTCTTTAAAAATCAGATCAGTCTGTGATCTACCCAGAACCATGTTTCTAATGGTTCTCACAATATTAATTGCATTCGATTTGAGCTCAATACTTCTTTGGCCCAAGCCAATCGCCACCTCAAGCCCAAACTCTACGGCCATGGCCACAGTAACCTCCACGCTCCACTGCCCTGATCTTGTTCACTGCAACCGCCACCAACCCACCTCTATCGTCCCTAACAACAGCCCCCCCTAG

mRNA sequence

TGCAAGAAGTGAACGAATCAATCCATTGTTGAACAAAATCGTACCAAAAGCCCAACCCAATAACCCAATAAAAAAAAGTCGGGTATAACCCCTAATCCCCAAACCCTAGCTCTAAAAACTGGTGGTATTTAAACCTTATCTTTCCCATTTCTCACCTTCTCGCAGCTCCACTTCACAGAGAGAGGAGAGGGAGAGAGGAGAGGAGAGGAGAGAGAAAACTTAAAAATGGTGTCTTTGAAGCTTCAGAAGCGGCTCGCCGCCGATATCCTCAAGTGTGGTCGTGGCAAGGTCTGGCTTGATCCTAATGAAGGAAATGAAATTTCCATGGCTAATTCCCGCCAAAACATCAGGAAGCTTGTTAAGGATGGGTTTATCATCAGGAAGCCTACCAATATTCATTCCAGGTCTCGAGCTCGTCGTATGAATGAGGCCAAGAGGAAGGGTCGTCACTCTGGATACGGTAAACGTAAGGGTACCAGGGAGGCTAGGCTTCCAACAAAGGTTTTGTGGATGAGGAGGATGAGAGTTCTTAGGAGGTTGCTCTGTAAGTACCGAGAGTCAAAGAAGATTGACAAGCACATGTACCATGACATGTACATGAAGGTCAAGGGTAATGTCTTTAAGAATAAGAGAGTATTGATGGAGAGCATTCACAAAACCAAGGCTGAGAAGGCTAGAGACAAGACCTTATCTGACCAATTTGAGGCTAAACGTGCTAAGAACAAGGCTAGCAGGGAGAGGAAACTCGCCAGAAGAGAAGAGCGTTTTGCACAGGGACCTGGTGGTGAAGCACCCACACCTGTAGCAGCTGCAGTACCAGAAGCTGTTCCAAAACAAACACAATCAGTCTGTGATCTACCCAGAACCATGTTTCTAATGGTTCTCACAATATTAATTGCATTCGATTTGAGCTCAATACTTCTTTGGCCCAAGCCAATCGCCACCTCAAGCCCAAACTCTACGGCCATGGCCACAGTAACCTCCACGCTCCACTGCCCTGATCTTGTTCACTGCAACCGCCACCAACCCACCTCTATCGTCCCTAACAACAGCCCCCCCTAG

Coding sequence (CDS)

ATGGTGTCTTTGAAGCTTCAGAAGCGGCTCGCCGCCGATATCCTCAAGTGTGGTCGTGGCAAGGTCTGGCTTGATCCTAATGAAGGAAATGAAATTTCCATGGCTAATTCCCGCCAAAACATCAGGAAGCTTGTTAAGGATGGGTTTATCATCAGGAAGCCTACCAATATTCATTCCAGGTCTCGAGCTCGTCGTATGAATGAGGCCAAGAGGAAGGGTCGTCACTCTGGATACGGTAAACGTAAGGGTACCAGGGAGGCTAGGCTTCCAACAAAGGTTTTGTGGATGAGGAGGATGAGAGTTCTTAGGAGGTTGCTCTGTAAGTACCGAGAGTCAAAGAAGATTGACAAGCACATGTACCATGACATGTACATGAAGGTCAAGGGTAATGTCTTTAAGAATAAGAGAGTATTGATGGAGAGCATTCACAAAACCAAGGCTGAGAAGGCTAGAGACAAGACCTTATCTGACCAATTTGAGGCTAAACGTGCTAAGAACAAGGCTAGCAGGGAGAGGAAACTCGCCAGAAGAGAAGAGCGTTTTGCACAGGGACCTGGTGGTGAAGCACCCACACCTGTAGCAGCTGCAGTACCAGAAGCTGTTCCAAAACAAACACAATCAGTCTGTGATCTACCCAGAACCATGTTTCTAATGGTTCTCACAATATTAATTGCATTCGATTTGAGCTCAATACTTCTTTGGCCCAAGCCAATCGCCACCTCAAGCCCAAACTCTACGGCCATGGCCACAGTAACCTCCACGCTCCACTGCCCTGATCTTGTTCACTGCAACCGCCACCAACCCACCTCTATCGTCCCTAACAACAGCCCCCCCTAG

Protein sequence

MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSRSRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREERFAQGPGGEAPTPVAAAVPEAVPKQTQSVCDLPRTMFLMVLTILIAFDLSSILLWPKPIATSSPNSTAMATVTSTLHCPDLVHCNRHQPTSIVPNNSPP

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo06634.1	Spo06634.1	mRNA

Homology

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BLAST of Spo06634.1 vs. NCBI nr
Match: gi|902221497|gb|KNA18929.1| (hypothetical protein SOVF_065380 [Spinacia oleracea])

HSP 1 Score: 392.1 bits (1006), Expect = 8.000e-106
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR
Sbjct: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY
Sbjct: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180

Query: 181 FAQGPGGEAPTPVAAAVPEAVPKQTQ 207
           FAQGPGGEAPTPVAAAVPEAVPKQTQ
Sbjct: 181 FAQGPGGEAPTPVAAAVPEAVPKQTQ 206

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BLAST of Spo06634.1 vs. NCBI nr
Match: gi|731369146|ref|XP_010696457.1| (PREDICTED: 60S ribosomal protein L19-3-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 353.2 bits (905), Expect = 4.100e-94
Identity = 189/208 (90.87%), Postives = 193/208 (92.79%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLK QKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKP+ IHSR
Sbjct: 1   MVSLKPQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPSKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRARRMNEAKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL KYRESKKIDKHMY
Sbjct: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKMARREER 180

Query: 181 FAQGPGGEAPT-PVAAAVPEAVPKQTQS 208
            A GPG EAP  P  AA PEA  K  Q+
Sbjct: 181 LAMGPGAEAPAQPAPAAAPEAAAKPVQT 208

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BLAST of Spo06634.1 vs. NCBI nr
Match: gi|747071177|ref|XP_011082444.1| (PREDICTED: 60S ribosomal protein L19-3-like [Sesamum indicum])

HSP 1 Score: 347.8 bits (891), Expect = 1.700e-92
Identity = 186/205 (90.73%), Postives = 193/205 (94.15%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLKLQKRLAA +LKCG+GKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPT IHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRARRM EAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLL KYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK+KAEKAR+KTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 FAQGPGGEAPTPVAAA-VPEAVPKQ 205
            AQGPG +AP P AAA VP + P Q
Sbjct: 181 LAQGPGEKAPPPAAAAPVPASQPAQ 205

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BLAST of Spo06634.1 vs. NCBI nr
Match: gi|40287526|gb|AAR83877.1| (60S ribosomal protein L19 [Capsicum annuum])

HSP 1 Score: 346.7 bits (888), Expect = 3.900e-92
Identity = 184/204 (90.20%), Postives = 188/204 (92.16%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLKLQKRLAA +LKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPT IHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRARRM EAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLL KYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLME+IHKTKAEKAR+KTLSDQFEA+RAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMENIHKTKAEKAREKTLSDQFEARRAKNKASRERKFARREER 180

Query: 181 FAQGPGGEAPTPVAAAVPEAVPKQ 205
            AQGPGGE P   AA    A P Q
Sbjct: 181 LAQGPGGEKPVQPAAPAAAAAPAQ 204

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BLAST of Spo06634.1 vs. NCBI nr
Match: gi|922346949|ref|XP_013450386.1| (60S ribosomal protein L19 [Medicago truncatula])

HSP 1 Score: 345.9 bits (886), Expect = 6.600e-92
Identity = 183/207 (88.41%), Postives = 191/207 (92.27%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLKLQKRLA+ +LKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPT IHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRARRM EAKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL KYRE+KKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK+KAEKAR+KTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 FAQGPGGEAPTPVAAAVPEAVPKQTQS 208
           FAQGPGGE P    +A P A  K TQ+
Sbjct: 181 FAQGPGGEKPAEAPSAAPVAATKPTQT 207

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BLAST of Spo06634.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJ19_SPIOL (Ribosomal protein L19 OS=Spinacia oleracea GN=SOVF_065380 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 5.600e-106
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR
Sbjct: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY
Sbjct: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180

Query: 181 FAQGPGGEAPTPVAAAVPEAVPKQTQ 207
           FAQGPGGEAPTPVAAAVPEAVPKQTQ
Sbjct: 181 FAQGPGGEAPTPVAAAVPEAVPKQTQ 206

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BLAST of Spo06634.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B6M1_BETVU (Ribosomal protein L19 OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g180480 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.900e-94
Identity = 189/208 (90.87%), Postives = 193/208 (92.79%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLK QKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKP+ IHSR
Sbjct: 1   MVSLKPQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPSKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRARRMNEAKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL KYRESKKIDKHMY
Sbjct: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKMARREER 180

Query: 181 FAQGPGGEAPT-PVAAAVPEAVPKQTQS 208
            A GPG EAP  P  AA PEA  K  Q+
Sbjct: 181 LAMGPGAEAPAQPAPAAAPEAAAKPVQT 208

[Close]

BLAST of Spo06634.1 vs. UniProtKB/TrEMBL
Match: Q6RYC4_CAPAN (Ribosomal protein L19 OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.700e-92
Identity = 184/204 (90.20%), Postives = 188/204 (92.16%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLKLQKRLAA +LKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPT IHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRARRM EAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLL KYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLME+IHKTKAEKAR+KTLSDQFEA+RAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMENIHKTKAEKAREKTLSDQFEARRAKNKASRERKFARREER 180

Query: 181 FAQGPGGEAPTPVAAAVPEAVPKQ 205
            AQGPGGE P   AA    A P Q
Sbjct: 181 LAQGPGGEKPVQPAAPAAAAAPAQ 204

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BLAST of Spo06634.1 vs. UniProtKB/TrEMBL
Match: I3SA92_MEDTR (Ribosomal protein L19 OS=Medicago truncatula GN=MTR_7g108955 PE=2 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 4.600e-92
Identity = 183/207 (88.41%), Postives = 191/207 (92.27%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLKLQKRLA+ +LKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPT IHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRARRM EAKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL KYRE+KKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK+KAEKAR+KTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 FAQGPGGEAPTPVAAAVPEAVPKQTQS 208
           FAQGPGGE P    +A P A  K TQ+
Sbjct: 181 FAQGPGGEKPAEAPSAAPVAATKPTQT 207

[Close]

BLAST of Spo06634.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HGC4_SOLCH (Ribosomal protein L19 OS=Solanum chacoense PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 4.600e-92
Identity = 183/204 (89.71%), Postives = 189/204 (92.65%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLKLQKRLAA +LKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPT IHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRARRM EAKRKGRHSGYGKRKGTREARLPTKVLWMRR+RVLRRLL KYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMRRLRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLME+IHKTKAEKAR+KTLSDQFEA+RAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMENIHKTKAEKAREKTLSDQFEARRAKNKASRERKFARREER 180

Query: 181 FAQGPGGEAPTPVAAAVPEAVPKQ 205
            AQGPGGE P    AA   A+P Q
Sbjct: 181 LAQGPGGEKPVQQPAAPAAAIPAQ 204

[Close]

BLAST of Spo06634.1 vs. ExPASy Swiss-Prot
Match: RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana GN=RPL19A PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.300e-89
Identity = 176/208 (84.62%), Postives = 189/208 (90.87%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLKLQKRLAA ++KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPT IHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRAR+M  AK KGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLL KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYM+VKGNVFKNKRVLMESIHK+KAEKAR+KTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 FAQGPGGEAPTPVAAAVPEAVPKQTQSV 209
            A+GPGG+   PVAA  P A P  T +V
Sbjct: 181 LAKGPGGDV-APVAAPAPAATPAPTAAV 207

[Close]

BLAST of Spo06634.1 vs. ExPASy Swiss-Prot
Match: RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 5.800e-88
Identity = 173/208 (83.17%), Postives = 186/208 (89.42%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLK+QKRLAA ++KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPT IHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRAR +NEAKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAR+KTL+DQFEAKR KNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 FAQGP-GGEAPTPVAA-AVPEAVPKQTQ 207
            AQGP GGE  TP  A   PE   K+++
Sbjct: 181 LAQGPGGGETTTPAGAPQQPEVTKKKSK 208

[Close]

BLAST of Spo06634.1 vs. ExPASy Swiss-Prot
Match: RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana GN=RPL19C PE=2 SV=3)

HSP 1 Score: 325.1 bits (832), Expect = 7.500e-88
Identity = 172/202 (85.15%), Postives = 185/202 (91.58%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLKLQKRLA+ +LKCG+ KVWLDPNEG++ISMANSRQNIRKLVKDGFIIRKPT IHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRAR++N AKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLL KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK+KAEKAR+KTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 FAQGPGGEAPTPVAAAVPEAVP 203
            A+GPGG+ P     A    VP
Sbjct: 181 LAKGPGGDIPAAAPPAQTAEVP 202

[Close]

BLAST of Spo06634.1 vs. ExPASy Swiss-Prot
Match: RL19_DROME (60S ribosomal protein L19 OS=Drosophila melanogaster GN=RpL19 PE=1 SV=2)

HSP 1 Score: 239.6 bits (610), Expect = 4.100e-62
Identity = 127/182 (69.78%), Postives = 149/182 (81.87%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           M SLKLQKRLAA +L+CG+ KVWLDPNE NEI+  NSRQNIRKL+KDG II+KP  +HSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
            R R+  EA+RKGRH G+GKRKGT  AR+PTK+LWM+R RVLRRLL KYR+SKKID+H+Y
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HD+YMK KGNVFKNKRVLME IHK KAEK R K L+DQ EA+R K + +R+    RREER
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARK----RREER 178

Query: 181 FA 183
            A
Sbjct: 181 IA 178

[Close]

BLAST of Spo06634.1 vs. ExPASy Swiss-Prot
Match: RL19_HUMAN (60S ribosomal protein L19 OS=Homo sapiens GN=RPL19 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 7.800e-61
Identity = 123/180 (68.33%), Postives = 147/180 (81.67%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           M  L+LQKRLA+ +L+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP  +HSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           +R R+   A+RKGRH G GKRKGT  AR+P KV WMRRMR+LRRLL +YRESKKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           H +Y+KVKGNVFKNKR+LME IHK KA+KAR K L+DQ EA+R+K K +R+    RREER
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARK----RREER 176

[Close]

BLAST of Spo06634.1 vs. TAIR (Arabidopsis)
Match: AT1G02780.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 330.1 bits (845), Expect = 1.300e-90
Identity = 176/208 (84.62%), Postives = 189/208 (90.87%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLKLQKRLAA ++KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPT IHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRAR+M  AK KGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLL KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYM+VKGNVFKNKRVLMESIHK+KAEKAR+KTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 FAQGPGGEAPTPVAAAVPEAVPKQTQSV 209
            A+GPGG+   PVAA  P A P  T +V
Sbjct: 181 LAKGPGGDV-APVAAPAPAATPAPTAAV 207

[Close]

BLAST of Spo06634.1 vs. TAIR (Arabidopsis)
Match: AT3G16780.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 325.5 bits (833), Expect = 3.200e-89
Identity = 173/208 (83.17%), Postives = 186/208 (89.42%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLK+QKRLAA ++KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPT IHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRAR +NEAKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAR+KTL+DQFEAKR KNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 FAQGP-GGEAPTPVAA-AVPEAVPKQTQ 207
            AQGP GGE  TP  A   PE   K+++
Sbjct: 181 LAQGPGGGETTTPAGAPQQPEVTKKKSK 208

[Close]

BLAST of Spo06634.1 vs. TAIR (Arabidopsis)
Match: AT4G02230.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 325.1 bits (832), Expect = 4.200e-89
Identity = 172/202 (85.15%), Postives = 185/202 (91.58%), Query Frame = 1

		  
Query: 1   MVSLKLQKRLAADILKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTNIHSR 60
           MVSLKLQKRLA+ +LKCG+ KVWLDPNEG++ISMANSRQNIRKLVKDGFIIRKPT IHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKIDKHMY 120
           SRAR++N AKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLL KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKLARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK+KAEKAR+KTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 FAQGPGGEAPTPVAAAVPEAVP 203
            A+GPGG+ P     A    VP
Sbjct: 181 LAKGPGGDIPAAAPPAQTAEVP 202

[Close]

BLAST of Spo06634.1 vs. TAIR (Arabidopsis)
Match: AT4G16030.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 74.7 bits (182), Expect = 1.000e-13
Identity = 61/134 (45.52%), Postives = 75/134 (55.97%), Query Frame = 1

		  
Query: 56  NIHSRSRARRMNEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLCKYRESKKI 115
           + HSRSRARR      K RH+GYGK   T EA         RR+++L+RLL K+  +KKI
Sbjct: 5   HFHSRSRARR------KCRHTGYGK--DTMEALRRIMKRLTRRLKMLKRLLKKFCWNKKI 64

Query: 116 DKHM-YHDMYMKVKGNVFKNKRVLMESIHKTKAEKARDKTLSDQFEAKRAKNKASRERKL 175
           DK + YHDM+MKVKG V+KNK VLMES+H                       K+SRERK 
Sbjct: 65  DKLVYYHDMFMKVKGKVYKNKCVLMESMH-----------------------KSSRERKF 107

Query: 176 ARREERFAQGPGGE 189
           +  E R A  P GE
Sbjct: 125 SGSEMRLALEPEGE 107

The following BLAST results are available for this feature:

BLAST of Spo06634.1 vs. NCBI nr
BLAST of Spo06634.1 vs. UniProtKB/TrEMBL
BLAST of Spo06634.1 vs. ExPASy Swiss-Prot
BLAST of Spo06634.1 vs. TAIR (Arabidopsis)

BLAST of Spo06634.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902221497\|gb\|KNA18929.1\|	8.0e-106	100.	hypothetical protein SOVF_0653...	[more]
gi\|731369146\|ref\|XP_010696457.1\|	4.1e-94	90.8	PREDICTED: 60S ribosomal prote...	[more]
gi\|747071177\|ref\|XP_011082444.1\|	1.7e-92	90.7	PREDICTED: 60S ribosomal prote...	[more]
gi\|40287526\|gb\|AAR83877.1\|	3.9e-92	90.2	60S ribosomal protein L19 [Cap...	[more]
gi\|922346949\|ref\|XP_013450386.1\|	6.6e-92	88.4	60S ribosomal protein L19 [Med...	[more]

BLAST of Spo06634.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RJ19_SPIOL	5.6e-106	100.	Ribosomal protein L19 OS=Spina...	[more]
A0A0J8B6M1_BETVU	2.9e-94	90.8	Ribosomal protein L19 OS=Beta ...	[more]
Q6RYC4_CAPAN	2.7e-92	90.2	Ribosomal protein L19 OS=Capsi...	[more]
I3SA92_MEDTR	4.6e-92	88.4	Ribosomal protein L19 OS=Medic...	[more]
A0A0V0HGC4_SOLCH	4.6e-92	89.7	Ribosomal protein L19 OS=Solan...	[more]

BLAST of Spo06634.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
RL191_ARATH	2.3e-89	84.6	60S ribosomal protein L19-1 OS...	[more]
RL192_ARATH	5.8e-88	83.1	60S ribosomal protein L19-2 OS...	[more]
RL193_ARATH	7.5e-88	85.1	60S ribosomal protein L19-3 OS...	[more]
RL19_DROME	4.1e-62	69.7	60S ribosomal protein L19 OS=D...	[more]
RL19_HUMAN	7.8e-61	68.3	60S ribosomal protein L19 OS=H...	[more]

BLAST of Spo06634.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4

Position :

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x 1


Match Name	E-value	Identity	Description
AT1G02780.1	1.3e-90	84.6	Ribosomal protein L19e family ...	[more]
AT3G16780.1	3.2e-89	83.1	Ribosomal protein L19e family ...	[more]
AT4G02230.1	4.2e-89	85.1	Ribosomal protein L19e family ...	[more]
AT4G16030.1	1.0e-13	45.5	Ribosomal protein L19e family ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000196	Ribosomal protein L19/L19e domain	PFAM	PF01280	Ribosomal_L19e	coord: 4..146 score: 1.6
IPR000196	Ribosomal protein L19/L19e domain	SMART	SM01416	Ribosomal_L19e_2	coord: 3..146 score: 2.0
IPR000196	Ribosomal protein L19/L19e domain	unknown	SSF48140	Ribosomal protein L19 (L19e)	coord: 3..144 score: 1.18
IPR015972	Ribosomal protein L19/L19e, domain 1	GENE3D	1.10.1650.10		coord: 1..55 score: 2.7
IPR015974	Ribosomal protein L19/L19e, domain 3	GENE3D	1.10.1200.60		coord: 90..149 score: 2.7
IPR023638	Ribosomal protein L19/L19e conserved site	PROSITE	PS00526	RIBOSOMAL_L19E	coord: 7..26 scor
IPR027547	Ribosomal protein L19/L19e	HAMAP	MF_01475	Ribosomal_L19e	coord: 3..149 score: 19
None	No IPR available	PANTHER	PTHR10722	60S RIBOSOMAL PROTEIN L19	coord: 1..203 score: 8.8E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006541	glutamine metabolic process
biological_process	GO:0006425	glutaminyl-tRNA aminoacylation
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0006412	translation
biological_process	GO:0009186	deoxyribonucleoside diphosphate metabolic process
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006177	GMP biosynthetic process
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0006529	asparagine biosynthetic process
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0009202	deoxyribonucleoside triphosphate biosynthetic process
biological_process	GO:0009263	deoxyribonucleotide biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009089	lysine biosynthetic process via diaminopimelate
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006424	glutamyl-tRNA aminoacylation
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0043488	regulation of mRNA stability
biological_process	GO:0006508	proteolysis
biological_process	GO:0030163	protein catabolic process
biological_process	GO:0010206	photosystem II repair
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0006396	RNA processing
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0006449	regulation of translational termination
biological_process	GO:0051083	'de novo' cotranslational protein folding
biological_process	GO:0000478	endonucleolytic cleavage involved in rRNA processing
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0042545	cell wall modification
biological_process	GO:0006433	prolyl-tRNA aminoacylation
biological_process	GO:0006560	proline metabolic process
biological_process	GO:0006525	arginine metabolic process
biological_process	GO:0030488	tRNA methylation
biological_process	GO:0006397	mRNA processing
biological_process	GO:0009553	embryo sac development
biological_process	GO:0006429	leucyl-tRNA aminoacylation
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0019877	diaminopimelate biosynthetic process
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0071702	organic substance transport
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0006438	valyl-tRNA aminoacylation
biological_process	GO:0009099	valine biosynthetic process
biological_process	GO:0006450	regulation of translational fidelity
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0001731	formation of translation preinitiation complex
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0009987	cellular process
biological_process	GO:0006885	regulation of pH
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0006813	potassium ion transport
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0010050	vegetative phase change
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0006260	DNA replication
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0018444	translation release factor complex
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005971	ribonucleoside-diphosphate reductase complex
cellular_component	GO:0009533	chloroplast stromal thylakoid
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0030117	membrane coat
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0015030	Cajal body
cellular_component	GO:0009332	glutamate-tRNA ligase complex
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005622	intracellular
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0016363	nuclear matrix
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005732	small nucleolar ribonucleoprotein complex
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0042277	peptide binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity
molecular_function	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
molecular_function	GO:0016462	pyrophosphatase activity
molecular_function	GO:0004540	ribonuclease activity
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0015299	solute:proton antiporter activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0031369	translation initiation factor binding
molecular_function	GO:0002161	aminoacyl-tRNA editing activity
molecular_function	GO:0004832	valine-tRNA ligase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase
molecular_function	GO:0070402	NADPH binding
molecular_function	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0004818	glutamate-tRNA ligase activity
molecular_function	GO:0004819	glutamine-tRNA ligase activity
molecular_function	GO:0004823	leucine-tRNA ligase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004827	proline-tRNA ligase activity
molecular_function	GO:0003747	translation release factor activity
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo17017	0.78	Barchart \| Table
Spo19207	0.77	Barchart \| Table
Spo18647	0.77	Barchart \| Table
Spo13856	0.76	Barchart \| Table
Spo20614	0.76	Barchart \| Table
Spo22520	0.76	Barchart \| Table
Spo22310	0.75	Barchart \| Table
Spo19401	0.75	Barchart \| Table
Spo15583	0.75	Barchart \| Table
Spo11943	0.75	Barchart \| Table
Spo04311	0.75	Barchart \| Table
Spo08441	0.74	Barchart \| Table
Spo17219	0.74	Barchart \| Table
Spo21152	0.74	Barchart \| Table
Spo24703	0.74	Barchart \| Table
Spo22338	0.74	Barchart \| Table
Spo23193	0.74	Barchart \| Table
Spo15751	0.74	Barchart \| Table
Spo25328	0.73	Barchart \| Table
Spo20376	0.73	Barchart \| Table
Spo23165	0.73	Barchart \| Table
Spo21387	0.73	Barchart \| Table
Spo08451	0.73	Barchart \| Table
Spo23465	0.73	Barchart \| Table
Spo12994	0.73	Barchart \| Table
Spo08160	0.72	Barchart \| Table
Spo20752	0.72	Barchart \| Table
Spo12874	0.72	Barchart \| Table
Spo07071	0.72	Barchart \| Table
Spo15422	0.72	Barchart \| Table
Spo12391	0.71	Barchart \| Table
Spo16334	0.71	Barchart \| Table
Spo00482	0.71	Barchart \| Table
Spo23931	0.71	Barchart \| Table
Spo05638	0.71	Barchart \| Table
Spo22860	0.71	Barchart \| Table
Spo05849	0.71	Barchart \| Table
Spo21910	0.71	Barchart \| Table
Spo07962	0.71	Barchart \| Table
Spo20941	0.71	Barchart \| Table
Spo11870	0.71	Barchart \| Table
Spo12071	0.71	Barchart \| Table
Spo14367	0.71	Barchart \| Table
Spo14514	0.71	Barchart \| Table
Spo00170	0.71	Barchart \| Table
Spo05210	0.70	Barchart \| Table
Spo06455	0.70	Barchart \| Table
Spo02189	0.70	Barchart \| Table
Spo22809	0.70	Barchart \| Table
Spo04470	0.70	Barchart \| Table
Spo15132	0.70	Barchart \| Table
Spo16097	0.70	Barchart \| Table
Spo02471	0.70	Barchart \| Table
Spo03555	0.70	Barchart \| Table
Spo20141	0.70	Barchart \| Table
Spo23513	0.70	Barchart \| Table
Spo17638	0.70	Barchart \| Table
Spo19325	0.70	Barchart \| Table
Spo08502	0.70	Barchart \| Table
Spo13048	0.70	Barchart \| Table
Spo21646	0.70	Barchart \| Table
Spo16388	0.69	Barchart \| Table
Spo18200	0.69	Barchart \| Table
Spo20161	0.69	Barchart \| Table
Spo19756	0.69	Barchart \| Table
Spo01639	0.69	Barchart \| Table
Spo08761	0.69	Barchart \| Table
Spo00129	0.69	Barchart \| Table
Spo08816	0.69	Barchart \| Table
Spo06094	0.69	Barchart \| Table
Spo23160	0.69	Barchart \| Table
Spo05267	0.69	Barchart \| Table
Spo22200	0.69	Barchart \| Table
Spo06743	0.69	Barchart \| Table
Spo03701	0.69	Barchart \| Table
Spo09426	0.69	Barchart \| Table
Spo25954	0.69	Barchart \| Table
Spo00780	0.69	Barchart \| Table
Spo11026	0.69	Barchart \| Table
Spo20410	0.69	Barchart \| Table
Spo01001	0.69	Barchart \| Table
Spo02163	0.69	Barchart \| Table
Spo12809	0.68	Barchart \| Table
Spo07402	0.68	Barchart \| Table
Spo15946	0.68	Barchart \| Table
Spo05190	0.68	Barchart \| Table
Spo04490	0.68	Barchart \| Table
Spo20789	0.68	Barchart \| Table
Spo03053	0.68	Barchart \| Table
Spo03046	0.68	Barchart \| Table
Spo07313	0.68	Barchart \| Table
Spo25615	0.68	Barchart \| Table
Spo01617	0.68	Barchart \| Table
Spo13630	0.68	Barchart \| Table
Spo16710	0.68	Barchart \| Table
Spo27223	0.67	Barchart \| Table
Spo02181	0.67	Barchart \| Table
Spo02790	0.67	Barchart \| Table
Spo08776	0.67	Barchart \| Table
Spo09563	0.67	Barchart \| Table
Spo10882	0.67	Barchart \| Table
Spo11434	0.67	Barchart \| Table
Spo13074	0.67	Barchart \| Table
Spo13130	0.67	Barchart \| Table
Spo15134	0.67	Barchart \| Table
Spo15797	0.67	Barchart \| Table
Spo17081	0.67	Barchart \| Table
Spo17496	0.67	Barchart \| Table
Spo17617	0.67	Barchart \| Table
Spo17780	0.67	Barchart \| Table
Spo17929	0.67	Barchart \| Table
Spo18393	0.67	Barchart \| Table
Spo18492	0.67	Barchart \| Table
Spo19345	0.67	Barchart \| Table
Spo20243	0.67	Barchart \| Table
Spo21619	0.67	Barchart \| Table
Spo22394	0.67	Barchart \| Table
Spo22869	0.67	Barchart \| Table
Spo23428	0.67	Barchart \| Table
Spo27104	0.67	Barchart \| Table
Spo12926	0.66	Barchart \| Table
Spo00560	0.66	Barchart \| Table
Spo06168	0.66	Barchart \| Table
Spo05788	0.66	Barchart \| Table
Spo05783	0.66	Barchart \| Table
Spo26803	0.66	Barchart \| Table
Spo05748	0.66	Barchart \| Table
Spo05417	0.66	Barchart \| Table
Spo04983	0.66	Barchart \| Table
Spo23345	0.66	Barchart \| Table
Spo00525	0.66	Barchart \| Table
Spo02912	0.66	Barchart \| Table
Spo24047	0.66	Barchart \| Table
Spo18449	0.66	Barchart \| Table
Spo17124	0.66	Barchart \| Table
Spo15810	0.66	Barchart \| Table
Spo02374	0.66	Barchart \| Table
Spo02228	0.66	Barchart \| Table
Spo12516	0.66	Barchart \| Table
Spo11093	0.66	Barchart \| Table
Spo10105	0.66	Barchart \| Table
Spo09601	0.66	Barchart \| Table
Spo25841	0.66	Barchart \| Table
Spo08046	0.66	Barchart \| Table
Spo21812	0.66	Barchart \| Table
Spo07671	0.66	Barchart \| Table
Spo06635	0.66	Barchart \| Table
Spo12725	0.65	Barchart \| Table
Spo12598	0.65	Barchart \| Table
Spo04219	0.65	Barchart \| Table
Spo06501	0.65	Barchart \| Table
Spo06451	0.65	Barchart \| Table
Spo10980	0.65	Barchart \| Table
Spo19650	0.65	Barchart \| Table
Spo13973	0.65	Barchart \| Table
Spo09584	0.65	Barchart \| Table
Spo21022	0.65	Barchart \| Table
Spo08980	0.65	Barchart \| Table
Spo08488	0.65	Barchart \| Table
Spo22804	0.65	Barchart \| Table
Spo14165	0.65	Barchart \| Table
Spo02472	0.65	Barchart \| Table
Spo04757	0.65	Barchart \| Table