Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAGAAAAATAAAAAAACACATACAACTGACCTTCACACTAGAGTCTAGACACGATTAGACCAGACCATAGAAGAATCAGATCAAACCGGATGAAGTGAGCCCATCCTAATTTGGCGGCAGCAAAAGTGAACACGAAGACCCGGGGGCGCATCATCCACATTCCAGGAGAAAGACCCAGATAGAACACGGGTGAAAATGGTGGTAATCGCACCTCCCACTTCTCTTTCTCTCTCTTCGTGTAAATGCCGCCCTTCTTTCAATCCTCCTACACTTTCCAAGCTCCTGTTCCCCAAACCAAAACCATTTACAAGTAAGTTAACCTGATTCTGGACTGATTAGACCATAACCAGTTCATTAATTTGATTGTCTTACATCTAATGTTGTTTAACGTGTTTCCTTTTTCCATTAATTTGCAACCGTTGATATGTTCAAGAACTACATTTGAATTTACCGTTTATCATGGTTCAATATTTGATTGATGGGGTTTTATGGGATCATATGATGTTGGAAATGGTGAAATTGGGATTAAAAGTAGCTTTGATTGTTCTCAATTTTGGTTTTGGATTAGACTCATTTCCCCATTGTTTTTATTAGCTTTATTGAGTTGGTGAATTGTGAATTGTGAATTGTGAATTGTGAATTGTTGGACAGTTGTGGCAATGAGTGATGACCCAGTTCTTGAGTGGATTCTCACTGAAGGGAAAGCAAAACAGATTAGTAAATCAAGTCCTGTTGGTGGTGGTTGCATCAATCTTGCCACCCGTTACGACACCGATGTCGGTCCTTTCTTTGTTAAAACTAACAGGTATATTATGCTTGGATGTTGATATTACCTGTTCATGTTGAACTTACTTACAAAATGCACTTGTTGATATTTCTGGAAAAAATGAGAGATGTTATTATCGTGATTATGAAACTTATTGTAATTTCTAGGTAATTAACTTGCTCCACTTATTTGCAATGTTGGAATAGGAGTATTGGCCAATCCATGTTTGAAGGGGAAGCTCTTGGTTTAAGACTTATGTTTGAAACCAATACAATTCGCGTCCCCAAGCCATATAAGGTAAGTAAGTTGCCGAAGTTTTGCTTGGTAACTTACCTGATTGGCTGATTGTATACCTGGGTTTGCTAAGGTCTCTAACCACCTGGGAATATCTGAGTGTATCCCTTATTGTGGACTGCAGGTTGGATCTTTACCGCGAGGTGGCTCTTACATCATCATGGAATTCGTAGAATTTGGAGCAGCTAGAAGTGGCCAGGTGAGGATGGCTTAGCTTGAAATCACCCATGTATAATTTCTGTGTTGTTCTCCAAGTATCTTAAACAGTTCATATCTTTAGCCAGCTTTAGGGAAAAAGCTTGCAGAAATGCATAAAGCTGGGAAATCTGACAGAGGCTTTGGCTTTGAAGTTGATAATACTATCGGGAGGTACGTTCCTTTCTGAGCTGCTCTCATCAGTGATCAGTAGATGAATGTCTATTGTATTTGAGTATTATATATTTTAGATTTGGTGTAGTTCATCTTTCTGACTTCATTTGTTATCTCATTTTTAGATTTGGCTCTAGTTTGTTTCTGGAGCAGATGTTATGGCGATCATGATTATTACTGCTTGACTCTACTTTTATTGTTATGCAGTACCCCACAGATTAATACCTGGACATCAGATTGGATTGAGTTTTATGGAAAGCATAGACTGGGCTACCAACTTAAATTGGCTCGAGATCAGTTTGGAGATTCTTCTATCTACGAAAAAGGTTTTCACCTATGTTTTTACTGCACTGCTTTAGGATTTTCTAGTTAGTGCATTTTCTTTGATATCTTTACTGATAACTTTGATCATACGATCTAAGTCACATAAACTACTGTCGGTGCTTCAGTTTGTACTCCTGCCTGTTTTATCGGTTTCATCGGCTGGAAAAATAATTTTGTGTGCTTTATATACTAATACTCTTTTTGCGGGGGACCTTATTGAATTTCACTGTTGTTGATGTTGAAATATGTTTGCATCACCTGACGTTTGAGATTTTTGGTTGTGAAAGGACAAAAGTTGGCAAAGAACCTGGCACCACTGTTTGAGAATGTTGTGATTGAGCCATGTTTGCTGCATGGAGATCTGTGGAGTGGGAATGTAACCTATGACAAGAATGGAGAACCTGTTATTCTTGATCCAGCATGCTATTGTGAGTTCTACCCTTCTAGCTGTCCCTTGGTTTCGATTTGGTTGTTTCAGTTCCTGCTTATAAACAGAATACAGCAAAAGGCTGTGCCCAAAGTAGAATAATGCTGCTGGAGAATGTGATGAATGCCTATGTTTCATGATAAGACTCAGTTTTAATTGAAAAGATTATGTTAAGTCTTAACCTCTTTAATGATGCCTAGCTATGGTGATTTCTGAATGGTGAACTCCACTTATTGCTGCATTTTTTCCATCGAACAAATAATTTTTTCTTGGTTGTTGGAATCATTTCTTGTATGCAGGGAACACAGACTCATATGGAGACAGCTTACGCGTTAACCTCATGACTTACCATTTTATCCGTTTAATATGTAGATGGACATAATGAAGCAGAATTTGGAATGTCATGGTGTGCTGGCTTCGGTTCATCATTTTACAACGCCTATTTTGAGGTATTCTCATTTCATCCGCTGTTTATGTTGAATGACTTGTACATTTATGAAAATTTGTTTGGTTGACTTCTGTAATCTTGTTTCGTTCATTTGTATAATGTCATATGCTCTCTCCTGTACGACTTACTTGCCTCAGGTGATGCCCCAACAACCAGGATTCGAGAAACGAAGAGACCTTTACATGTTGTATCACTACCTTAATCACTATAATCTTTTTGGCTCAAGTTATCGTTCATCTGCCGTCTCTATAATCGAAGATTATTTGCAGATGCTAAAGATTTAGACTCAGTTTTACCTGATGTATATTTCCTGTAAATGATTTTTAATTTGAATGTATCAGATTATCAGCAAATATTCTGTATCCTCTGACAATGTATCACTCTTAGATTAAAACTAATGTATAAGGAATACTATAGAGTATGTATTATCAGAATAATGTTCGAATAATTAAATTATTCGTGTTAATGATTTATGCTTGTATTTACTTTTTAATAATAATATATCTACTACGTAGTTATCTACCAG CTAGAAAAATAAAAAAACACATACAACTGACCTTCACACTAGAGTCTAGACACGATTAGACCAGACCATAGAAGAATCAGATCAAACCGGATGAAGTGAGCCCATCCTAATTTGGCGGCAGCAAAAGTGAACACGAAGACCCGGGGGCGCATCATCCACATTCCAGGAGAAAGACCCAGATAGAACACGGGTGAAAATGGTGGTAATCGCACCTCCCACTTCTCTTTCTCTCTCTTCGTGTAAATGCCGCCCTTCTTTCAATCCTCCTACACTTTCCAAGCTCCTGTTCCCCAAACCAAAACCATTTACAATTGTGGCAATGAGTGATGACCCAGTTCTTGAGTGGATTCTCACTGAAGGGAAAGCAAAACAGATTAGTAAATCAAGTCCTGTTGGTGGTGGTTGCATCAATCTTGCCACCCGTTACGACACCGATGTCGGTCCTTTCTTTGTTAAAACTAACAGGAGTATTGGCCAATCCATGTTTGAAGGGGAAGCTCTTGGTTTAAGACTTATGTTTGAAACCAATACAATTCGCGTCCCCAAGCCATATAAGGTTGGATCTTTACCGCGAGGTGGCTCTTACATCATCATGGAATTCGTAGAATTTGGAGCAGCTAGAAGTGGCCAGCCAGCTTTAGGGAAAAAGCTTGCAGAAATGCATAAAGCTGGGAAATCTGACAGAGGCTTTGGCTTTGAAGTTGATAATACTATCGGGAGTACCCCACAGATTAATACCTGGACATCAGATTGGATTGAGTTTTATGGAAAGCATAGACTGGGCTACCAACTTAAATTGGCTCGAGATCAGTTTGGAGATTCTTCTATCTACGAAAAAGGACAAAAGTTGGCAAAGAACCTGGCACCACTGTTTGAGAATGTTGTGATTGAGCCATGTTTGCTGCATGGAGATCTGTGGAGTGGGAATGTAACCTATGACAAGAATGGAGAACCTGTTATTCTTGATCCAGCATGCTATTATGGACATAATGAAGCAGAATTTGGAATGTCATGGTGTGCTGGCTTCGGTTCATCATTTTACAACGCCTATTTTGAGGTGATGCCCCAACAACCAGGATTCGAGAAACGAAGAGACCTTTACATGTTGTATCACTACCTTAATCACTATAATCTTTTTGGCTCAAGTTATCGTTCATCTGCCGTCTCTATAATCGAAGATTATTTGCAGATGCTAAAGATTTAGACTCAGTTTTACCTGATGTATATTTCCTGTAAATGATTTTTAATTTGAATGTATCAGATTATCAGCAAATATTCTGTATCCTCTGACAATGTATCACTCTTAGATTAAAACTAATGTATAAGGAATACTATAGAGTATGTATTATCAGAATAATGTTCGAATAATTAAATTATTCGTGTTAATGATTTATGCTTGTATTTACTTTTTAATAATAATATATCTACTACGTAGTTATCTACCAG ATGGTGGTAATCGCACCTCCCACTTCTCTTTCTCTCTCTTCGTGTAAATGCCGCCCTTCTTTCAATCCTCCTACACTTTCCAAGCTCCTGTTCCCCAAACCAAAACCATTTACAATTGTGGCAATGAGTGATGACCCAGTTCTTGAGTGGATTCTCACTGAAGGGAAAGCAAAACAGATTAGTAAATCAAGTCCTGTTGGTGGTGGTTGCATCAATCTTGCCACCCGTTACGACACCGATGTCGGTCCTTTCTTTGTTAAAACTAACAGGAGTATTGGCCAATCCATGTTTGAAGGGGAAGCTCTTGGTTTAAGACTTATGTTTGAAACCAATACAATTCGCGTCCCCAAGCCATATAAGGTTGGATCTTTACCGCGAGGTGGCTCTTACATCATCATGGAATTCGTAGAATTTGGAGCAGCTAGAAGTGGCCAGCCAGCTTTAGGGAAAAAGCTTGCAGAAATGCATAAAGCTGGGAAATCTGACAGAGGCTTTGGCTTTGAAGTTGATAATACTATCGGGAGTACCCCACAGATTAATACCTGGACATCAGATTGGATTGAGTTTTATGGAAAGCATAGACTGGGCTACCAACTTAAATTGGCTCGAGATCAGTTTGGAGATTCTTCTATCTACGAAAAAGGACAAAAGTTGGCAAAGAACCTGGCACCACTGTTTGAGAATGTTGTGATTGAGCCATGTTTGCTGCATGGAGATCTGTGGAGTGGGAATGTAACCTATGACAAGAATGGAGAACCTGTTATTCTTGATCCAGCATGCTATTATGGACATAATGAAGCAGAATTTGGAATGTCATGGTGTGCTGGCTTCGGTTCATCATTTTACAACGCCTATTTTGAGGTGATGCCCCAACAACCAGGATTCGAGAAACGAAGAGACCTTTACATGTTGTATCACTACCTTAATCACTATAATCTTTTTGGCTCAAGTTATCGTTCATCTGCCGTCTCTATAATCGAAGATTATTTGCAGATGCTAAAGATTTAG MVVIAPPTSLSLSSCKCRPSFNPPTLSKLLFPKPKPFTIVAMSDDPVLEWILTEGKAKQISKSSPVGGGCINLATRYDTDVGPFFVKTNRSIGQSMFEGEALGLRLMFETNTIRVPKPYKVGSLPRGGSYIIMEFVEFGAARSGQPALGKKLAEMHKAGKSDRGFGFEVDNTIGSTPQINTWTSDWIEFYGKHRLGYQLKLARDQFGDSSIYEKGQKLAKNLAPLFENVVIEPCLLHGDLWSGNVTYDKNGEPVILDPACYYGHNEAEFGMSWCAGFGSSFYNAYFEVMPQQPGFEKRRDLYMLYHYLNHYNLFGSSYRSSAVSIIEDYLQMLKI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo06676.1 vs. NCBI nr
Match: gi|902198548|gb|KNA13696.1| (hypothetical protein SOVF_114300 [Spinacia oleracea]) HSP 1 Score: 699.1 bits (1803), Expect = 3.700e-198 Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 1
BLAST of Spo06676.1 vs. NCBI nr
Match: gi|731361407|ref|XP_010692338.1| (PREDICTED: protein-ribulosamine 3-kinase, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 642.5 bits (1656), Expect = 4.100e-181 Identity = 301/335 (89.85%), Postives = 322/335 (96.12%), Query Frame = 1
BLAST of Spo06676.1 vs. NCBI nr
Match: gi|802697422|ref|XP_012083489.1| (PREDICTED: protein-ribulosamine 3-kinase, chloroplastic [Jatropha curcas]) HSP 1 Score: 549.3 bits (1414), Expect = 4.700e-153 Identity = 253/326 (77.61%), Postives = 288/326 (88.34%), Query Frame = 1
BLAST of Spo06676.1 vs. NCBI nr
Match: gi|698460048|ref|XP_009781438.1| (PREDICTED: protein-ribulosamine 3-kinase, chloroplastic isoform X2 [Nicotiana sylvestris]) HSP 1 Score: 542.7 bits (1397), Expect = 4.400e-151 Identity = 251/334 (75.15%), Postives = 286/334 (85.63%), Query Frame = 1
BLAST of Spo06676.1 vs. NCBI nr
Match: gi|1000981728|ref|XP_015583584.1| (PREDICTED: protein-ribulosamine 3-kinase, chloroplastic isoform X2 [Ricinus communis]) HSP 1 Score: 541.6 bits (1394), Expect = 9.800e-151 Identity = 248/318 (77.99%), Postives = 282/318 (88.68%), Query Frame = 1
BLAST of Spo06676.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2F6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_114300 PE=4 SV=1) HSP 1 Score: 699.1 bits (1803), Expect = 2.600e-198 Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 1
BLAST of Spo06676.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJD2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g019910 PE=4 SV=1) HSP 1 Score: 642.5 bits (1656), Expect = 2.900e-181 Identity = 301/335 (89.85%), Postives = 322/335 (96.12%), Query Frame = 1
BLAST of Spo06676.1 vs. UniProtKB/TrEMBL
Match: A0A067KA61_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14465 PE=4 SV=1) HSP 1 Score: 549.3 bits (1414), Expect = 3.300e-153 Identity = 253/326 (77.61%), Postives = 288/326 (88.34%), Query Frame = 1
BLAST of Spo06676.1 vs. UniProtKB/TrEMBL
Match: K4AZB8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 538.5 bits (1386), Expect = 5.800e-150 Identity = 249/326 (76.38%), Postives = 280/326 (85.89%), Query Frame = 1
BLAST of Spo06676.1 vs. UniProtKB/TrEMBL
Match: M1BFE0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017054 PE=4 SV=1) HSP 1 Score: 538.1 bits (1385), Expect = 7.600e-150 Identity = 249/326 (76.38%), Postives = 280/326 (85.89%), Query Frame = 1
BLAST of Spo06676.1 vs. ExPASy Swiss-Prot
Match: FN3KR_ARATH (Protein-ribulosamine 3-kinase, chloroplastic OS=Arabidopsis thaliana GN=At3g61080 PE=1 SV=2) HSP 1 Score: 523.9 bits (1348), Expect = 1.300e-147 Identity = 243/324 (75.00%), Postives = 275/324 (84.88%), Query Frame = 1
BLAST of Spo06676.1 vs. ExPASy Swiss-Prot
Match: FN3KR_ORYSI (Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_09747 PE=3 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 1.200e-137 Identity = 220/296 (74.32%), Postives = 258/296 (87.16%), Query Frame = 1
BLAST of Spo06676.1 vs. ExPASy Swiss-Prot
Match: FN3KR_ORYSJ (Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0117800 PE=2 SV=1) HSP 1 Score: 490.3 bits (1261), Expect = 1.600e-137 Identity = 220/296 (74.32%), Postives = 257/296 (86.82%), Query Frame = 1
BLAST of Spo06676.1 vs. ExPASy Swiss-Prot
Match: KT3K_HUMAN (Ketosamine-3-kinase OS=Homo sapiens GN=FN3KRP PE=1 SV=2) HSP 1 Score: 233.0 bits (593), Expect = 4.700e-60 Identity = 121/290 (41.72%), Postives = 166/290 (57.24%), Query Frame = 1
BLAST of Spo06676.1 vs. ExPASy Swiss-Prot
Match: KT3K_MOUSE (Ketosamine-3-kinase OS=Mus musculus GN=Fn3krp PE=1 SV=2) HSP 1 Score: 232.3 bits (591), Expect = 8.000e-60 Identity = 119/287 (41.46%), Postives = 164/287 (57.14%), Query Frame = 1
BLAST of Spo06676.1 vs. TAIR (Arabidopsis)
Match: AT3G61080.1 (Protein kinase superfamily protein) HSP 1 Score: 523.9 bits (1348), Expect = 7.500e-149 Identity = 243/324 (75.00%), Postives = 275/324 (84.88%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06676.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo06676.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo06676.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo06676.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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