Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GATGGATGTTCTCAGTTAAAATTAAGGCTCAAGGATCTGAATTCAGTGTTGACAGTGTAGCTGTGGACGCCTTTACTCATTTCAAACATCTGCTTCTGCCTATTACTGATCGAAATCCGTATCTCTCAGAGGGAACAAGACAGGTATCATAATAAGTCAGTGACCTGTAGAGATTTAGGCCACGTGTAAGTGTATCCACTATGTCATTCGTCTAGCCTTTTGATGCAGTATTATTGATGAACGTTCATGATAAATGCTTTGTTGATATTATTATGTTTTGTTTCATGGTCCATATTTTAGAACGTTCCTCCTTAGTCCTCCCTCCCTATTGACGGTGCAACCCTTCTGATATGTAAAAATGATCATCTTTATGACATGGATGCATGAGCTATATCCATGTTGATTCCTTTTACATAGTTTAATTACACTCAGAGTAATGCTTATTCCGTTGATTGGATGGCATACTTGGCAATCTTGATTCAATTTGTCATTTTTCTAAATCCCTTTGTTTCTTCTGTCAGGCTGCTGCGACTACTGCTGCTTTGGCAAAGAAGTATGGAGCAGATATAACAGTTGTAGGTATGTATCCTGACGTCTTTTTTACAACAGAATCAATATGTGAGACTCGGCTTTTCCAAACATATCGCTATCATGGCGCAACATGAAACAACTTGTAGCGGGGTAATCGACAGTGAATCGTGGTGGCAGTCTTGAATGCAAATGTAACACTTAATAATAGACGACTGAACTGTAGAGAGATAATTTTGTGTGTCGAGGGCTGTTTCCAGTGCTAGATTTCAGGCTACCGAACTTTGTTCTCATTGCAGTTATTGACGACAAGCCAAAAGAGTCGCATCCTGAGCATGAGACACAACTGGCGAGCATTCGCTGGCATTTGTCTGAAGGTATTTAAATTTCTACCCTCCCTCTCCCCTTGCCCATTTTGTTTGTCTTATTTACCAAGCTTGCTGAAATTAAGGTTTTTTAGATGAAGTGATGGACTTTGTAGGATGCAAAAGTTATAATGTTTGATAGAGATTTTGGTTTTTATTCACACCTTCTACTTGAAGAAGAGTCAGGATGAAACTGTTCATATTGTTCATGCTTGATCCGAGTGTTACTGGGACTTGGGGATAAGGACAAGGGGGATATGAATCTGGTATGCTGGATTTTCTTTTTCAAGCCATTCCATGTTTTTGGGGGGTATTGTTTGAGGTGTCAAAGTGTCGTCTCCTTTCTAGATGATGGCTTAATACTTTCAAGTTGAAATAAAGAGTCCAAGTATTGTAGTTTGTTTCAATATTTGAGCCTATGTGGTGGCTCGATTACGGTATACTCTATAATTAATATGCGTATTTGATCCAGCAAGTGTCTTGCATAATTTCTATCTAGACACAAACTATTTACTCGTATTATTCTTTTATCTTTATTCAAACCAAAGATTACAAAAGACGGGATGTCTGTCACTCTGATTCTGTGTGCATATTTTACAAGAGATGAGTTAGGCATCTGTGTCATATACACTTCCGTCTTATTGTCGTTACTGACTGGACTTTTGAACACACAAATGACAGGTGGGTTTCAGGAATTTAGGTTGCTAGAGAAACTTGGGGAAGGAAGTAAGCCTACTGCCATAATTGGTGAGGTTGCTGATGATATGAGTTTAGATTTGGTTGTTTTAAGCATGGAAGCAATACATTCCAAGAATGTTGATGCAAATCTCCTGGCAGAGTTTATCCCCTGCCCCGTGTTACTTTTGCCCTTGTAAGAATGACTGAATTTGACGACTCTGACCCCTCTTGAAGTGCCTGTTGATCTTATTGAATCAGTTTGATCAGTCTGCTGTTTTCTTCTTCTTCTTCTGGTTTGGCCTTTTCTTATGGAATCCCGGCGAATTAAGAATATTGAGTTGGGAGTTTGTTGTTGTACAGAAAGTTGTGCTCTTCTCAAGTGTTTTTGCAAGTTGATTAGTCTAGTGATTATTGTTTTTGTCTACGTTTAATTGTCTCTCTTATTACATTGAACACGGGAGATCCTTTTGAACAACCCATTATAATAGGAAATTCTTATATATTGAAATTAATTCATCAAGTTGATGATTAAATTCATGGACGTTCTAGTGGACGTTATGCGAAAGGATGATTCATTCCATTCGGATAGACATGAGAGTCCAACTATATTGCATTGCCAGAATCTGTGTTGTATATTTGAAAGAGGTTGACCTCCTTGCTTCTCTCATCGTACAATCCTCTTCCCGACGAGCCTCCCTTCTCCTCGGTCCGCGGAGATCGCCGGTCAGGCATACGGCGGTGAATTCGTTCCCGGTCCTTGTACACACCGCCGTCACACTATGGGAGCTGGCCATGCCCGAAGTTGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCATAA GATGGATGTTCTCAGTTAAAATTAAGGCTCAAGGATCTGAATTCAGTGTTGACAGTGTAGCTGTGGACGCCTTTACTCATTTCAAACATCTGCTTCTGCCTATTACTGATCGAAATCCGTATCTCTCAGAGGGAACAAGACAGGCTGCTGCGACTACTGCTGCTTTGGCAAAGAAGTATGGAGCAGATATAACAGTTGTAGTTATTGACGACAAGCCAAAAGAGTCGCATCCTGAGCATGAGACACAACTGGCGAGCATTCGCTGGCATTTGTCTGAAGGTGGGTTTCAGGAATTTAGGTTGCTAGAGAAACTTGGGGAAGGAAGTAAGCCTACTGCCATAATTGGTGAGGTTGCTGATGATATGAGTTTAGATTTGGTTGTTTTAAGCATGGAAGCAATACATTCCAAGAATGTTGATGCAAATCTCCTGGCAGAGTTTATCCCCTGCCCCGTGTTACTTTTGCCCTTAATCTGTGTTGTATATTTGAAAGAGGTTGACCTCCTTGCTTCTCTCATCGTACAATCCTCTTCCCGACGAGCCTCCCTTCTCCTCGGTCCGCGGAGATCGCCGGTCAGGCATACGGCGGTGAATTCGTTCCCGGTCCTTGTACACACCGCCGTCACACTATGGGAGCTGGCCATGCCCGAAGTTGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCATAA ATGTTCTCAGTTAAAATTAAGGCTCAAGGATCTGAATTCAGTGTTGACAGTGTAGCTGTGGACGCCTTTACTCATTTCAAACATCTGCTTCTGCCTATTACTGATCGAAATCCGTATCTCTCAGAGGGAACAAGACAGGCTGCTGCGACTACTGCTGCTTTGGCAAAGAAGTATGGAGCAGATATAACAGTTGTAGTTATTGACGACAAGCCAAAAGAGTCGCATCCTGAGCATGAGACACAACTGGCGAGCATTCGCTGGCATTTGTCTGAAGGTGGGTTTCAGGAATTTAGGTTGCTAGAGAAACTTGGGGAAGGAAGTAAGCCTACTGCCATAATTGGTGAGGTTGCTGATGATATGAGTTTAGATTTGGTTGTTTTAAGCATGGAAGCAATACATTCCAAGAATGTTGATGCAAATCTCCTGGCAGAGTTTATCCCCTGCCCCGTGTTACTTTTGCCCTTAATCTGTGTTGTATATTTGAAAGAGGTTGACCTCCTTGCTTCTCTCATCGTACAATCCTCTTCCCGACGAGCCTCCCTTCTCCTCGGTCCGCGGAGATCGCCGGTCAGGCATACGGCGGTGAATTCGTTCCCGGTCCTTGTACACACCGCCGTCACACTATGGGAGCTGGCCATGCCCGAAGTTGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCATAA MFSVKIKAQGSEFSVDSVAVDAFTHFKHLLLPITDRNPYLSEGTRQAAATTAALAKKYGADITVVVIDDKPKESHPEHETQLASIRWHLSEGGFQEFRLLEKLGEGSKPTAIIGEVADDMSLDLVVLSMEAIHSKNVDANLLAEFIPCPVLLLPLICVVYLKEVDLLASLIVQSSSRRASLLLGPRRSPVRHTAVNSFPVLVHTAVTLWELAMPEVVTLTARRGMPKAGLVTGVKS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo06689.1 vs. NCBI nr
Match: gi|902218978|gb|KNA18197.1| (hypothetical protein SOVF_073110 [Spinacia oleracea]) HSP 1 Score: 300.1 bits (767), Expect = 3.500e-78 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1
BLAST of Spo06689.1 vs. NCBI nr
Match: gi|731338592|ref|XP_010680404.1| (PREDICTED: uncharacterized protein LOC104895556 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 270.8 bits (691), Expect = 2.300e-69 Identity = 141/153 (92.16%), Postives = 147/153 (96.08%), Query Frame = 1
BLAST of Spo06689.1 vs. NCBI nr
Match: gi|460373412|ref|XP_004232513.1| (PREDICTED: uncharacterized protein LOC101267188 [Solanum lycopersicum]) HSP 1 Score: 254.2 bits (648), Expect = 2.200e-64 Identity = 126/152 (82.89%), Postives = 143/152 (94.08%), Query Frame = 1
BLAST of Spo06689.1 vs. NCBI nr
Match: gi|255580629|ref|XP_002531137.1| (PREDICTED: uncharacterized protein LOC8268061 [Ricinus communis]) HSP 1 Score: 253.8 bits (647), Expect = 2.900e-64 Identity = 131/152 (86.18%), Postives = 140/152 (92.11%), Query Frame = 1
BLAST of Spo06689.1 vs. NCBI nr
Match: gi|590702406|ref|XP_007046619.1| (Uncharacterized protein TCM_000147 [Theobroma cacao]) HSP 1 Score: 251.9 bits (642), Expect = 1.100e-63 Identity = 128/151 (84.77%), Postives = 139/151 (92.05%), Query Frame = 1
BLAST of Spo06689.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RH87_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_073110 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 2.400e-78 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1
BLAST of Spo06689.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F184_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g134210 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.600e-69 Identity = 141/153 (92.16%), Postives = 147/153 (96.08%), Query Frame = 1
BLAST of Spo06689.1 vs. UniProtKB/TrEMBL
Match: K4BAL8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.500e-64 Identity = 126/152 (82.89%), Postives = 143/152 (94.08%), Query Frame = 1
BLAST of Spo06689.1 vs. UniProtKB/TrEMBL
Match: B9SYR8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0361210 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 2.000e-64 Identity = 131/152 (86.18%), Postives = 140/152 (92.11%), Query Frame = 1
BLAST of Spo06689.1 vs. UniProtKB/TrEMBL
Match: A0A061DGG9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000147 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 7.600e-64 Identity = 128/151 (84.77%), Postives = 139/151 (92.05%), Query Frame = 1
BLAST of Spo06689.1 vs. TAIR (Arabidopsis)
Match: AT5G66090.1 (unknown protein) HSP 1 Score: 224.9 bits (572), Expect = 5.100e-59 Identity = 113/153 (73.86%), Postives = 135/153 (88.24%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06689.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo06689.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo06689.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo06689.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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