Spo06697 (gene)

Overview
NameSpo06697
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionSkp1, putative
LocationSpoScf_00449 : 429812 .. 432389 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTTTTAATTAAAAAAATAAATACAAATACAATAATCATCACAAGTCACAACCAAAATTACTTACGGATTTCCTTCGTTCTAATCTCATCGTCTACCTCCTACCTCCACTTTCTCTCCCTTAGGGTTAGGGTTTTCAATCCCACAGAAATCAAATTTCAATGGCGTCAACAAGGAAGATAACACTCAAGAGTTCAGATGGTGAAACTTTTGAGGTCGAAGAAACGGTTGCTTTGGAATCGCAGACGATCAAGCACATGGTTGAAGACGATTGCGCTGATAATGTGATCCCTTTACCGAATGTTAGCAGCAAGATCCTAGCTAAGGTCATTGAGTACTGTAAGAAGCATGTCGATTCTCCTAAACCCTCTGATACCACCGCCACCGCTACCGCTACCGCTACCGCCACCGCCACCGATCGTCAGGTTGATGACGAACTCAAGAGTTGGGATGCTGATTTCGTTAAAGTTGACCAGGCTACCCTCTTCGATCTCATCCTTGTATCTCTCTATCCCTCTTTCTCTCTCTTAATTTAATTGTTTTTTATGTGGATTTTCTTATGTTTTTGTGCTAGTTGTGATGATTATTGTTGTAATTGGGGGTTTGAAATTGGATGTCATTTTTTCTGGGGTTGATGTTGTTGCAGCTGATTATTTTTGGAAATTGAGTTTGAAATAATATCAATTATGTTCTTATAATTGGTAATTCAGGAAGTTTGGGACTGTTGTTTTTTGTTTGAATTTGAAGCTTTGCTTTCATTTTCTGGAACCAGGTGACGTTTTTGAAGTTTCTGTTGATTTATATCGAGTTTGTGACAATTTCTTAATTTTGACTAGGATTTTCTTGTTTGAAATTTATCACTTTTGAGCTTATGGTTTCTGCTTGGATGATTGTCTAATTGTTTATTGAGGTTTATTGAGGCTGAGTCTGATGTGAAATGAAAGTTTGTTGGTCCCATTTACATAGATTGCTTATGAATGTTGTGGTATTTCCAAACTTTTGAAGGTTAAGCCATTGTGTTCGTCATGTCGTTGTGTTAATATCATGGGAGCTTATTTGTCATGTTGCTGTCTTTCACTTGGCTTGCAGCCATTAGAATAATTGTAGAACTTGCAGCCATTAGAATATAGAGGGGTTCAATAACCTATAGTAGTAAGCTTTTGTCAAAGTGGTTTAGGAAGTGAGAACACATTACAATCACCTATTTCCTTTTTTTGCTACTTAAAAATTGTTTGTCCGTGAACCTTTTCTTTGGTTTGAGGCCGGATAAGATTATGTTGTGGTTGTATAATTCTTGGTTTCCAAAGAGGTATTCCTGCGTGGCTCTTGTGCAGAAGTGGTACATACTTGGTATTCTGGAACGTTTTTCATTCACCCTTGGATTCCTTCATCAACTTTCAAGATAGCGTAACGTGTATACTCCCGTATGTATCAGTCATAACTCATAAGTTCATAACAAAGAGTTTAATGGATGGTCTAATTATTTCCTATTTTACTTCCTGCAGTGTTATTTGCTTGAGATTGTATTATGATTTATTCGGTAATTTTTGAAGATTACAGTTGCAATTTGTTGGATAATGTTGTGCAAGACCTTATTTTGTTATATGGTGAAGGGCTGGAAGTGCTCAGGAAAGAATGGTCAAAACAAGTTTTTTCTTGTTTTTTCCCCCCTGATAAGCTAGAATGCTTTCTGTATTTAGTTGACTGAGTTTTGGTCCTTTTTATGATTAATAATGCGTCTTAGGTGCAACAAGATTCTTGGTTGATGTTGTCATTAAAGTATTGAACATACTTTTGTTAATAATGATTACTAATTGATTGATTTTTTTTTTCAAAATTTCAGGCTGCCAACTACCTGAATATTAAGAGCTTGCTGGACTTGACTTGTCAAACTGTTGCCGACATGATCAAGGGAAAGACACCCGAGGAGATCAGAAAGACGTTCAACATCAAGAACGACTTCACCCCGGAGGAAGAGGAGGAGGTTCGCAGGGAGAATCAATGGGCCTTTGAATGATGTTCATGGCACAGAACTGATGCAATCAAACTTATGGGAAAGATGATGTTCATGGGCACAGAAGAGAATCAAATTTATGGGAAGGATGTGTTTGGTTATTCTATGAACATGTCACTGTTTTTATGCATCTTGTAGTTGATATTGTCCAGACTTGATCTCATCTGTATTCTCCTCTCTTTAGAATACAATCTTCAATTATGAGACGAAGATGGATTGTAAATAATAGTAGTCTTTTGGAGGGTGGCTGCTAGTGGGTGCTTGCTTGTTACTGTTGGTATGCCCCATTTTCATACAATCACACCTTCTATCGTGTAATCATTTATGGGATTTGTTGAGTACTTTGCCTTAAAAACATATGTATCTGATTTCTGTGAGACTAAGCTATTACGAGTTCTTGCTGCATTTTAAGTTGCGCCTTAGGGTGTGAACCTGTTTGTTAAGTTGCAACCTTACAGGTACTTGGCCTGACCTTCGGATTGAATGTGACCTATGGCTTGGTTTTGAAAGTTCCATTCCAACTAGATTATTTTTCAATAAATATTCGGTTCATTTATTTATAAA

mRNA sequence

TCTTTTTTAATTAAAAAAATAAATACAAATACAATAATCATCACAAGTCACAACCAAAATTACTTACGGATTTCCTTCGTTCTAATCTCATCGTCTACCTCCTACCTCCACTTTCTCTCCCTTAGGGTTAGGGTTTTCAATCCCACAGAAATCAAATTTCAATGGCGTCAACAAGGAAGATAACACTCAAGAGTTCAGATGGTGAAACTTTTGAGGTCGAAGAAACGGTTGCTTTGGAATCGCAGACGATCAAGCACATGGTTGAAGACGATTGCGCTGATAATGTGATCCCTTTACCGAATGTTAGCAGCAAGATCCTAGCTAAGGTCATTGAGTACTGTAAGAAGCATGTCGATTCTCCTAAACCCTCTGATACCACCGCCACCGCTACCGCTACCGCTACCGCCACCGCCACCGATCGTCAGGTTGATGACGAACTCAAGAGTTGGGATGCTGATTTCGTTAAAGTTGACCAGGCTACCCTCTTCGATCTCATCCTTGCTGCCAACTACCTGAATATTAAGAGCTTGCTGGACTTGACTTGTCAAACTGTTGCCGACATGATCAAGGGAAAGACACCCGAGGAGATCAGAAAGACGTTCAACATCAAGAACGACTTCACCCCGGAGGAAGAGGAGGAGGTTCGCAGGGAGAATCAATGGGCCTTTGAATGATGTTCATGGCACAGAACTGATGCAATCAAACTTATGGGAAAGATGATGTTCATGGGCACAGAAGAGAATCAAATTTATGGGAAGGATGTGTTTGGTTATTCTATGAACATGTCACTGTTTTTATGCATCTTGTAGTTGATATTGTCCAGACTTGATCTCATCTGTATTCTCCTCTCTTTAGAATACAATCTTCAATTATGAGACGAAGATGGATTGTAAATAATAGTAGTCTTTTGGAGGGTGGCTGCTAGTGGGTGCTTGCTTGTTACTGTTGGTATGCCCCATTTTCATACAATCACACCTTCTATCGTGTAATCATTTATGGGATTTGTTGAGTACTTTGCCTTAAAAACATATGTATCTGATTTCTGTGAGACTAAGCTATTACGAGTTCTTGCTGCATTTTAAGTTGCGCCTTAGGGTGTGAACCTGTTTGTTAAGTTGCAACCTTACAGGTACTTGGCCTGACCTTCGGATTGAATGTGACCTATGGCTTGGTTTTGAAAGTTCCATTCCAACTAGATTATTTTTCAATAAATATTCGGTTCATTTATTTATAAA

Coding sequence (CDS)

ATGGCGTCAACAAGGAAGATAACACTCAAGAGTTCAGATGGTGAAACTTTTGAGGTCGAAGAAACGGTTGCTTTGGAATCGCAGACGATCAAGCACATGGTTGAAGACGATTGCGCTGATAATGTGATCCCTTTACCGAATGTTAGCAGCAAGATCCTAGCTAAGGTCATTGAGTACTGTAAGAAGCATGTCGATTCTCCTAAACCCTCTGATACCACCGCCACCGCTACCGCTACCGCTACCGCCACCGCCACCGATCGTCAGGTTGATGACGAACTCAAGAGTTGGGATGCTGATTTCGTTAAAGTTGACCAGGCTACCCTCTTCGATCTCATCCTTGCTGCCAACTACCTGAATATTAAGAGCTTGCTGGACTTGACTTGTCAAACTGTTGCCGACATGATCAAGGGAAAGACACCCGAGGAGATCAGAAAGACGTTCAACATCAAGAACGACTTCACCCCGGAGGAAGAGGAGGAGGTTCGCAGGGAGAATCAATGGGCCTTTGAATGA

Protein sequence

MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYCKKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06697.1Spo06697.1mRNA


Homology
[Close]
BLAST of Spo06697.1 vs. NCBI nr
Match: gi|902213012|gb|KNA17153.1| (hypothetical protein SOVF_082740 [Spinacia oleracea])

HSP 1 Score: 327.0 bits (837), Expect = 1.900e-86
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60
           MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC
Sbjct: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60

Query: 61  KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI 120
           KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI
Sbjct: 61  KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI 120

Query: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 170
[Close]
BLAST of Spo06697.1 vs. NCBI nr
Match: gi|731338602|ref|XP_010680409.1| (PREDICTED: SKP1-like protein 1B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 285.4 bits (729), Expect = 6.400e-74
Identity = 150/170 (88.24%), Postives = 154/170 (90.59%), Query Frame = 1 

		  

Query: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60
           MASTRKITLKSSDGETFEVEE+VALESQTIKHMVEDDCADNVIPLPNV+SKILAKVIEYC
Sbjct: 1   MASTRKITLKSSDGETFEVEESVALESQTIKHMVEDDCADNVIPLPNVTSKILAKVIEYC 60

Query: 61  KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI 120
           KKHVD PK S+              DRQVDDELK+WDADFVKVDQATLFDLILAANYLNI
Sbjct: 61  KKHVDFPKSSENN------------DRQVDDELKTWDADFVKVDQATLFDLILAANYLNI 120

Query: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 158
[Close]
BLAST of Spo06697.1 vs. NCBI nr
Match: gi|1009108914|ref|XP_015887325.1| (PREDICTED: SKP1-like protein 1B [Ziziphus jujuba])

HSP 1 Score: 268.5 bits (685), Expect = 8.100e-69
Identity = 139/170 (81.76%), Postives = 151/170 (88.82%), Query Frame = 1 

		  

Query: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60
           M+S RKITLKSSDGETFEV+E VALESQTIKHM+EDDCADN IPLPNV+SKIL+KVIEYC
Sbjct: 1   MSSGRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC 60

Query: 61  KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI 120
           +KHV++PKP +  ++             VDDELK+WDADFVKVDQATLFDLILAANYLNI
Sbjct: 61  RKHVEAPKPDERGSS-------------VDDELKAWDADFVKVDQATLFDLILAANYLNI 120

Query: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157
[Close]
BLAST of Spo06697.1 vs. NCBI nr
Match: gi|703095476|ref|XP_010095548.1| (SKP1-like protein 1B [Morus notabilis])

HSP 1 Score: 267.7 bits (683), Expect = 1.400e-68
Identity = 139/170 (81.76%), Postives = 150/170 (88.24%), Query Frame = 1 

		  

Query: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60
           M+S RKITLKSSDGETFEV+E VALESQTIKHM+EDDCADN IPLPNV+SKIL+KVIEYC
Sbjct: 1   MSSGRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC 60

Query: 61  KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI 120
           KKHV++PK  D  ++A             DD+LK+WDADFVKVDQATLFDLILAANYLNI
Sbjct: 61  KKHVEAPKSDDRASSA-------------DDDLKAWDADFVKVDQATLFDLILAANYLNI 120

Query: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157
[Close]
BLAST of Spo06697.1 vs. NCBI nr
Match: gi|225457883|ref|XP_002270061.1| (PREDICTED: SKP1-like protein 1B [Vitis vinifera])

HSP 1 Score: 266.5 bits (680), Expect = 3.100e-68
Identity = 137/170 (80.59%), Postives = 150/170 (88.24%), Query Frame = 1 

		  

Query: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60
           M+S+RKITLKSSDGE F+V+E VALESQTIKHM+EDDCADN IPLPNV+SKIL+KVIEYC
Sbjct: 1   MSSSRKITLKSSDGEAFDVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC 60

Query: 61  KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI 120
           KKHV++PKP + +               VD+ELK+WDADFVKVDQATLFDLILAANYLNI
Sbjct: 61  KKHVEAPKPEERSG--------------VDEELKAWDADFVKVDQATLFDLILAANYLNI 120

Query: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
[Close]
BLAST of Spo06697.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RCE1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_082740 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.300e-86
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60
           MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC
Sbjct: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60

Query: 61  KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI 120
           KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI
Sbjct: 61  KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI 120

Query: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 170
[Close]
BLAST of Spo06697.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C6Z1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g134270 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 4.500e-74
Identity = 150/170 (88.24%), Postives = 154/170 (90.59%), Query Frame = 1 

		  

Query: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60
           MASTRKITLKSSDGETFEVEE+VALESQTIKHMVEDDCADNVIPLPNV+SKILAKVIEYC
Sbjct: 1   MASTRKITLKSSDGETFEVEESVALESQTIKHMVEDDCADNVIPLPNVTSKILAKVIEYC 60

Query: 61  KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI 120
           KKHVD PK S+              DRQVDDELK+WDADFVKVDQATLFDLILAANYLNI
Sbjct: 61  KKHVDFPKSSENN------------DRQVDDELKTWDADFVKVDQATLFDLILAANYLNI 120

Query: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 158
[Close]
BLAST of Spo06697.1 vs. UniProtKB/TrEMBL
Match: W9QZI9_9ROSA (SKP1-like protein 1B OS=Morus notabilis GN=L484_016022 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 9.700e-69
Identity = 139/170 (81.76%), Postives = 150/170 (88.24%), Query Frame = 1 

		  

Query: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60
           M+S RKITLKSSDGETFEV+E VALESQTIKHM+EDDCADN IPLPNV+SKIL+KVIEYC
Sbjct: 1   MSSGRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC 60

Query: 61  KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI 120
           KKHV++PK  D  ++A             DD+LK+WDADFVKVDQATLFDLILAANYLNI
Sbjct: 61  KKHVEAPKSDDRASSA-------------DDDLKAWDADFVKVDQATLFDLILAANYLNI 120

Query: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157
[Close]
BLAST of Spo06697.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LMK0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G346050 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.200e-68
Identity = 138/170 (81.18%), Postives = 150/170 (88.24%), Query Frame = 1 

		  

Query: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60
           M+S RKITLKSSDGE FEV+E VALESQTIKHM+EDDCAD+ IPLPNV+SKIL+KVIEYC
Sbjct: 1   MSSGRKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 60

Query: 61  KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI 120
           KKHV+SPKP D T +             VDD+LK+WD++FVKVDQATLFDLILAANYLNI
Sbjct: 61  KKHVESPKPEDRTGS-------------VDDDLKTWDSEFVKVDQATLFDLILAANYLNI 120

Query: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157
[Close]
BLAST of Spo06697.1 vs. UniProtKB/TrEMBL
Match: A5BBC4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040452 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.200e-68
Identity = 137/170 (80.59%), Postives = 150/170 (88.24%), Query Frame = 1 

		  

Query: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60
           M+S+RKITLKSSDGE F+V+E VALESQTIKHM+EDDCADN IPLPNV+SKIL+KVIEYC
Sbjct: 1   MSSSRKITLKSSDGEAFDVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC 60

Query: 61  KKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNI 120
           KKHV++PKP + +               VD+ELK+WDADFVKVDQATLFDLILAANYLNI
Sbjct: 61  KKHVEAPKPEERSG--------------VDEELKAWDADFVKVDQATLFDLILAANYLNI 120

Query: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
[Close]
BLAST of Spo06697.1 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.100e-69
Identity = 133/171 (77.78%), Postives = 151/171 (88.30%), Query Frame = 1 

		  

Query: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60
           M++ RKITLKSSDGE FE++E VALESQTIKHM+EDDC DN IPLPNV+SKIL+KVIEYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 61  KKHVDSPKPSDTTA-TATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLN 120
           K+HV++ + S+TTA  A AT T T      D++LK+WD++F+KVDQ TLFDLILAANYLN
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120

Query: 121 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           IK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
[Close]
BLAST of Spo06697.1 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.600e-64
Identity = 127/168 (75.60%), Postives = 141/168 (83.93%), Query Frame = 1 

		  

Query: 3   STRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYCKK 62
           S +KI LKSSDGE+FEVEE VALESQTI HMVEDDC DN +PLPNV+SKILAKVIEYCK+
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 63  HVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNIKS 122
           HV++           AT+         DD+LK+WDADF+K+DQATLF+LILAANYLNIK+
Sbjct: 62  HVEAAASKAEAVEGAATS---------DDDLKAWDADFMKIDQATLFELILAANYLNIKN 121

Query: 123 LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           LLDLTCQTVADMIKGKTPEEIR TFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 122 LLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
[Close]
BLAST of Spo06697.1 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 6.700e-55
Identity = 115/171 (67.25%), Postives = 134/171 (78.36%), Query Frame = 1 

		  

Query: 1   MASTRK-ITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEY 60
           MA T+K I LKSSDGE+FE+EE VA++SQTIKHM+EDDCADN IPLPNV+  ILAKVIEY
Sbjct: 1   MAETKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEY 60

Query: 61  CKKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLN 120
           CKKHV+        A A A           +DELK+WD++FVKVDQ TLFDLILAANYLN
Sbjct: 61  CKKHVE--------AAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLN 120

Query: 121 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           I  LLDLTC+ VAD ++GKTPE++R  FNIKND+TPEEE EVR EN+WAFE
Sbjct: 121 IGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
[Close]
BLAST of Spo06697.1 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.400e-52
Identity = 112/171 (65.50%), Postives = 129/171 (75.44%), Query Frame = 1 

		  

Query: 1   MASTRK-ITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEY 60
           MA T+K I LKSSDGE+FEVEE VA+ESQTIKHM+EDDC DN IPLPNV+  ILAKVIEY
Sbjct: 1   MAETKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEY 60

Query: 61  CKKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLN 120
           CKKHV+        A A A           + ELK+WD DFVKVD  TLFDL+ AANYLN
Sbjct: 61  CKKHVE--------AAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLN 120

Query: 121 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           I  LLDLTC+ VAD ++GKTP ++R+ FNIKND+TPEEE EVR EN+WAFE
Sbjct: 121 ISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
[Close]
BLAST of Spo06697.1 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.100e-52
Identity = 109/169 (64.50%), Postives = 128/169 (75.74%), Query Frame = 1 

		  

Query: 3   STRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYCKK 62
           S++ I L SSDG++FEVEE VA++SQTI HMVEDDC  + IPL NV SKIL KVIEYCKK
Sbjct: 2   SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61

Query: 63  H-VDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNIK 122
           H VD   P                    +++L +WD  F+ ++Q+T+F+LILAANYLNIK
Sbjct: 62  HHVDEANPIS------------------EEDLNNWDEKFMDLEQSTIFELILAANYLNIK 121

Query: 123 SLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           SLLDLTCQTVADMIKGKTPEEIR TFNI+NDFTPEEEE VR+ENQWAFE
Sbjct: 122 SLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
[Close]
BLAST of Spo06697.1 vs. TAIR (Arabidopsis)
Match: AT5G42190.1 (E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein)

HSP 1 Score: 263.1 bits (671), Expect = 1.200e-70
Identity = 133/171 (77.78%), Postives = 151/171 (88.30%), Query Frame = 1 

		  

Query: 1   MASTRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYC 60
           M++ RKITLKSSDGE FE++E VALESQTIKHM+EDDC DN IPLPNV+SKIL+KVIEYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 61  KKHVDSPKPSDTTA-TATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLN 120
           K+HV++ + S+TTA  A AT T T      D++LK+WD++F+KVDQ TLFDLILAANYLN
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120

Query: 121 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           IK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
[Close]
BLAST of Spo06697.1 vs. TAIR (Arabidopsis)
Match: AT1G75950.1 (S phase kinase-associated protein 1)

HSP 1 Score: 245.4 bits (625), Expect = 2.600e-65
Identity = 127/168 (75.60%), Postives = 141/168 (83.93%), Query Frame = 1 

		  

Query: 3   STRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYCKK 62
           S +KI LKSSDGE+FEVEE VALESQTI HMVEDDC DN +PLPNV+SKILAKVIEYCK+
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 63  HVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNIKS 122
           HV++           AT+         DD+LK+WDADF+K+DQATLF+LILAANYLNIK+
Sbjct: 62  HVEAAASKAEAVEGAATS---------DDDLKAWDADFMKIDQATLFELILAANYLNIKN 121

Query: 123 LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           LLDLTCQTVADMIKGKTPEEIR TFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 122 LLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
[Close]
BLAST of Spo06697.1 vs. TAIR (Arabidopsis)
Match: AT1G20140.1 (SKP1-like 4)

HSP 1 Score: 214.9 bits (546), Expect = 3.800e-56
Identity = 115/171 (67.25%), Postives = 134/171 (78.36%), Query Frame = 1 

		  

Query: 1   MASTRK-ITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEY 60
           MA T+K I LKSSDGE+FE+EE VA++SQTIKHM+EDDCADN IPLPNV+  ILAKVIEY
Sbjct: 1   MAETKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEY 60

Query: 61  CKKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLN 120
           CKKHV+        A A A           +DELK+WD++FVKVDQ TLFDLILAANYLN
Sbjct: 61  CKKHVE--------AAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLN 120

Query: 121 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           I  LLDLTC+ VAD ++GKTPE++R  FNIKND+TPEEE EVR EN+WAFE
Sbjct: 121 IGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
[Close]
BLAST of Spo06697.1 vs. TAIR (Arabidopsis)
Match: AT2G25700.1 (SKP1-like 3)

HSP 1 Score: 207.2 bits (526), Expect = 7.900e-54
Identity = 112/171 (65.50%), Postives = 129/171 (75.44%), Query Frame = 1 

		  

Query: 1   MASTRK-ITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEY 60
           MA T+K I LKSSDGE+FEVEE VA+ESQTIKHM+EDDC DN IPLPNV+  ILAKVIEY
Sbjct: 1   MAETKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEY 60

Query: 61  CKKHVDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLN 120
           CKKHV+        A A A           + ELK+WD DFVKVD  TLFDL+ AANYLN
Sbjct: 61  CKKHVE--------AAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLN 120

Query: 121 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           I  LLDLTC+ VAD ++GKTP ++R+ FNIKND+TPEEE EVR EN+WAFE
Sbjct: 121 ISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
[Close]
BLAST of Spo06697.1 vs. TAIR (Arabidopsis)
Match: AT4G34210.1 (SKP1-like 11)

HSP 1 Score: 205.7 bits (522), Expect = 2.300e-53
Identity = 109/169 (64.50%), Postives = 128/169 (75.74%), Query Frame = 1 

		  

Query: 3   STRKITLKSSDGETFEVEETVALESQTIKHMVEDDCADNVIPLPNVSSKILAKVIEYCKK 62
           S++ I L SSDG++FEVEE VA++SQTI HMVEDDC  + IPL NV SKIL KVIEYCKK
Sbjct: 2   SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61

Query: 63  H-VDSPKPSDTTATATATATATATDRQVDDELKSWDADFVKVDQATLFDLILAANYLNIK 122
           H VD   P                    +++L +WD  F+ ++Q+T+F+LILAANYLNIK
Sbjct: 62  HHVDEANPIS------------------EEDLNNWDEKFMDLEQSTIFELILAANYLNIK 121

Query: 123 SLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
           SLLDLTCQTVADMIKGKTPEEIR TFNI+NDFTPEEEE VR+ENQWAFE
Sbjct: 122 SLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
The following BLAST results are available for this feature:
BLAST of Spo06697.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902213012|gb|KNA17153.1|1.9e-86100.hypothetical protein SOVF_0827... [more]
gi|731338602|ref|XP_010680409.1|6.4e-7488.2PREDICTED: SKP1-like protein 1... [more]
gi|1009108914|ref|XP_015887325.1|8.1e-6981.7PREDICTED: SKP1-like protein 1... [more]
gi|703095476|ref|XP_010095548.1|1.4e-6881.7SKP1-like protein 1B [Morus no... [more]
gi|225457883|ref|XP_002270061.1|3.1e-6880.5PREDICTED: SKP1-like protein 1... [more]
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BLAST of Spo06697.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RCE1_SPIOL1.3e-86100.Uncharacterized protein OS=Spi... [more]
A0A0J8C6Z1_BETVU4.5e-7488.2Uncharacterized protein OS=Bet... [more]
W9QZI9_9ROSA9.7e-6981.7SKP1-like protein 1B OS=Morus ... [more]
A0A0A0LMK0_CUCSA2.2e-6881.1Uncharacterized protein OS=Cuc... [more]
A5BBC4_VITVI2.2e-6880.5Putative uncharacterized prote... [more]
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BLAST of Spo06697.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
SKP1B_ARATH2.1e-6977.7SKP1-like protein 1B OS=Arabid... [more]
SKP1A_ARATH4.6e-6475.6SKP1-like protein 1A OS=Arabid... [more]
ASK4_ARATH6.7e-5567.2SKP1-like protein 4 OS=Arabido... [more]
ASK3_ARATH1.4e-5265.5SKP1-like protein 3 OS=Arabido... [more]
ASK11_ARATH4.1e-5264.5SKP1-like protein 11 OS=Arabid... [more]
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BLAST of Spo06697.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G42190.11.2e-7077.7E3 ubiquitin ligase SCF comple... [more]
AT1G75950.12.6e-6575.6S phase kinase-associated prot... [more]
AT1G20140.13.8e-5667.2SKP1-like 4[more]
AT2G25700.17.9e-5465.5SKP1-like 3[more]
AT4G34210.12.3e-5364.5SKP1-like 11[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001232S-phase kinase-associated protein 1-likeSMARTSM00512skp1_3coord: 4..120
score: 8.3
IPR011333SKP1/BTB/POZ domainunknownSSF54695POZ domaincoord: 5..67
score: 8.11
IPR016072SKP1 component, dimerisationPFAMPF01466Skp1coord: 121..168
score: 9.3
IPR016072SKP1 component, dimerisationunknownSSF81382Skp1 dimerisation domain-likecoord: 93..168
score: 1.26
IPR016073SKP1 component, POZ domainPFAMPF03931Skp1_POZcoord: 6..64
score: 9.8
IPR016897S-phase kinase-associated protein 1PIRPIRSF028729SCF_Skpcoord: 1..170
score: 1.1
NoneNo IPR availableGENE3D3.30.710.10coord: 3..170
score: 5.0
NoneNo IPR availablePANTHERPTHR11165SKP1coord: 1..170
score: 3.1

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006094 gluconeogenesis
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006096 glycolytic process
biological_process GO:0015979 photosynthesis
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009693 ethylene biosynthetic process
biological_process GO:0032880 regulation of protein localization
biological_process GO:0010200 response to chitin
biological_process GO:0009741 response to brassinosteroid
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0009651 response to salt stress
biological_process GO:0019447 D-cysteine catabolic process
cellular_component GO:0009523 photosystem II
cellular_component GO:0005829 cytosol
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005623 cell
cellular_component GO:0009507 chloroplast
molecular_function GO:0008660 1-aminocyclopropane-1-carboxylate deaminase activity
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0004518 nuclease activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0019148 D-cysteine desulfhydrase activity
RNA-Seq Expression