Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAGTTGGCCCTACTCAACACGACTCGAATCGAACCCAAGTCTTTCATATCTGTCCTGCTTTGGAGGGTAAGTGGGTAACCCAACAATACCGCCTCGAATCTGACCCGACCCTCGTTAACCCGGCTGGGTCGAAAGCTCTAGATCATCAAATTCTCTATAGGGTGTTAATGGTTAAGCCACTTCTTGATTGTTTAAACAAACAATGGAGTTCCAAAATTTAATCAAAGACAAGAAATTTTGGTTCGCTTCCGTCTTAATTGCTTGGGCTGCTGGACTTCAGGTAATTCCTACCGACTTTTATTTAATTATTAAACTAATTTTGAATTCTGCACATTTTGAAAGTTTCGCCATTGATTATTATCATCAATTTTTATGCAATTTCTGTTTCAATTGTTTTTTAGAGGTTTTTTGAAATTTAATTCTTGGTGAATATAGGGGCATATGATGTGGTTACAAAGGCAGGATGCTTTCAAGCAGAAATTCGGGGATTTAAACGAAAGTGATGATCAGAAGAACTTAAATTGAATGCTCAGGTTTGTTTTAAATTAGGGTTTACGGGTTGTAACTGGTAGTATTGACAAATTAGTGAGAATCGTTGTAATTTTATTGAATTGATTTTACAAATTAGAATTAATAAATGATCTGTTATTGTTGTTTGGATTGCAAATTTTATTTATTACTTCGGATTTAGAAGCATGTTCGTTTGTTCGAGACGGTAGGTCGAAGAATCGATAGTAATAACTGATTTTGCATCCTGTAAATGATGGAGTAGTGTTATCCTTTTGATTAAGATCTAGATGAGGTTGGAAATTGAGTTCAAAGTATCTAGTGTGGTGGAGTTTTTATTGGAACTTGTACTTTTTTTCTAGCCTCTACTGGATGTTTATTGTCATGATCGAGATTGGACTTTTACATGATACAGACTGAAAATGTGTTGTAAACTTGTAGTAGTAGATTATTTTCTCTCAGTTTGGGTTATTGCAGTTTGTTTTATTGACTTCCGGTAACAAAGAAAATTGTTGTGAAGTACACTATAGAGCTTTTCCTGTCCTGCTGGTTAGCCATTGTTGTTATCCTCAAAGTATAATCTTAGAGAAAGTTGTGATGATTTGTGGGAAAAGTATGTATGAACAAATTATTATTGGAAGCTCACTTTGATATTGGTAATTAGATGATCCTGCAAATAAGTTTATTTCAAGTTCAATTTGGATATTATAGTGCGTTTAAGATAAATATAGTTCAATTTAATTCAGTATAAAAACATCAGAGCCAAACTAATTATTTAAAATTCAGTTATGAAAGGTACTTTGTGAAGTAACATACACAAATCTTTGAAGGTATCAAAACTAGTGTAATTTGGACCTATACACAATAAAATTAGTTTGGTTCACTTCTTCACAAAGAAGTTCAACTGAGGTTAGCACAGAGTCGTTCCAGTTAAAAAGAACACACTATTGTGCAGCGTTAGGCGCTGTTGAAGTCTGTTTGAAGTTTGAACAATAAAATTCTTTCAGTTGCTCATCCCCGAACCTCGAATGAAGGGTTTCTGGTTAGTGAGATGGTGACATAGTATGAGGGTTTGCCAATTTGTGCAAAGAAAGGTTACGAATCTCGACTTATATGATACAGTTGATGCTTTCTCCCTCCATGGATGTTGTCAATATAGTGTTCTATTACAAGATATCAGGTGGTTGATTTATTGCCTAATTCAAAATAATTGTCTGGTGAAGTTTAGAATACTACTTGGTTGAAAATAGCAAGAGAAAAGAAGGGAAAGAGAAGAGGAATGAAAAAATCGAGGGTATTGGTGAGATTGCAGATTTCTATTGATTGCAAATTTTCAATTTATAGAACTGAAGGCCTTTATTATAATGCAATGCTATCACTTCACGTAAAATACGTCTCAGATGTATGTTATCTGTTAAGAAGATTCTGATGGGTTGATGGCAGAGGGTCCTATTTGAAATCTGGTGTTTGAAATGCCTTTCTGAAAAATATATTCAATTCAATTCATTCTTCGGTTACAAAAGTATTCGTGATTTTGATGTTAGGTTTTAGTTAGAAGTGTTAGCTTCAATTGACACAGGTGAAGTCTAACAAATTTGCTATGTCTATTTTAATATATGCATTCTGCAGATGTGCTTACACTTCTGCATCATTATAGTTTTCAAAGTGTTTCTTCACCTCCATAAAATCTTGGATTCTGGATGGAATTTTGCTATTGATGTGAGATACTGATATTTGATTTATATTGTTGATGTAGAGTGATTGATCTCTTGGACCTCAAAACCTCTTATTGTGAATAAATCTTGGTAGGAGTGGTTTAAGTCGGTGAAGAGTCTTCTGTATGGAGCTTTAATCTTGTACTCTCTTTGATACAGATTCCTGCCATTGTTCAACCAGTCTTGAGAAAAGCTCCAGTCTGGCCAGCAAATAAAATCTCCAGCTCTTTTGCCAGCATGGATGGCAAATGTAGATATTATCCTTTATCCGAAATTGTTGGGTGTATCTTTTTGCTAGAAGCAATCATATGTTGTTAACTAGACCCAACTAGATTCAGTTTTATCTCGAATATCTACTTGACTTTTCAAATATTATTGGAAACTATTTAGTTTATTTGGGAAGAACACCAAAATGAAGAGTTTGGAGAAGATTCAACTTCCTGGAAATGATATCTGATTTCCTCTTCCTGGATTACTTCTTGAAGGTTCCTTGTGTCGTGATGGAGTTACTAGATCATTCCAGATCATTCCAGATCATTATCAATCTTCTGGTTGGTTGATTTTGTGTCAACTTTAGCATAGTTTGCTTAATGAATTTGTAGGTTACTCAAATTAAAGTTATGTAACTCGTCTCAAGACCATTTTGTATTTTGATTAAATCAGATGGCTTGAATTCCCGACCACTAGTTTGTCTATATTGTTTCCTAATCTCAGATGTTAAGACAACGTATGATGTAGACAAGATTCGTTCTCAGTTGGGTACCACCCCTTTAAGTCTTTACCAACTAAACTAG AAAGTTGGCCCTACTCAACACGACTCGAATCGAACCCAAGTCTTTCATATCTGTCCTGCTTTGGAGGGTAAGTGGGTAACCCAACAATACCGCCTCGAATCTGACCCGACCCTCGTTAACCCGGCTGGGTCGAAAGCTCTAGATCATCAAATTCTCTATAGGGTGTTAATGGTTAAGCCACTTCTTGATTGTTTAAACAAACAATGGAGTTCCAAAATTTAATCAAAGACAAGAAATTTTGGTTCGCTTCCGTCTTAATTGCTTGGGCTGCTGGACTTCAGGGGCATATGATGTGGTTACAAAGGCAGGATGCTTTCAAGCAGAAATTCGGGGATTTAAACGAAAATGTTAAGACAACGTATGATGTAGACAAGATTCGTTCTCAGTTGGGTACCACCCCTTTAAGTCTTTACCAACTAAACTAG ATGGAGTTCCAAAATTTAATCAAAGACAAGAAATTTTGGTTCGCTTCCGTCTTAATTGCTTGGGCTGCTGGACTTCAGGGGCATATGATGTGGTTACAAAGGCAGGATGCTTTCAAGCAGAAATTCGGGGATTTAAACGAAAATGTTAAGACAACGTATGATGTAGACAAGATTCGTTCTCAGTTGGGTACCACCCCTTTAAGTCTTTACCAACTAAACTAG MEFQNLIKDKKFWFASVLIAWAAGLQGHMMWLQRQDAFKQKFGDLNENVKTTYDVDKIRSQLGTTPLSLYQLN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo06766.1 vs. NCBI nr
Match: gi|902239474|gb|KNA25612.1| (hypothetical protein SOVF_005030 [Spinacia oleracea]) HSP 1 Score: 103.2 bits (256), Expect = 1.900e-19 Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 1
BLAST of Spo06766.1 vs. NCBI nr
Match: gi|731318632|ref|XP_010669831.1| (PREDICTED: uncharacterized protein LOC104886964 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 89.4 bits (220), Expect = 2.900e-15 Identity = 39/50 (78.00%), Postives = 45/50 (90.00%), Query Frame = 1
BLAST of Spo06766.1 vs. NCBI nr
Match: gi|1009120505|ref|XP_015876958.1| (PREDICTED: uncharacterized protein LOC107413512 [Ziziphus jujuba]) HSP 1 Score: 89.0 bits (219), Expect = 3.800e-15 Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 1
BLAST of Spo06766.1 vs. NCBI nr
Match: gi|802672816|ref|XP_012081555.1| (PREDICTED: uncharacterized protein LOC105641579 [Jatropha curcas]) HSP 1 Score: 86.7 bits (213), Expect = 1.900e-14 Identity = 39/48 (81.25%), Postives = 42/48 (87.50%), Query Frame = 1
BLAST of Spo06766.1 vs. NCBI nr
Match: gi|296086277|emb|CBI31718.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 85.1 bits (209), Expect = 5.500e-14 Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 1
BLAST of Spo06766.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S3B9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_005030 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 1.400e-19 Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 1
BLAST of Spo06766.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D083_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g037260 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.000e-15 Identity = 39/50 (78.00%), Postives = 45/50 (90.00%), Query Frame = 1
BLAST of Spo06766.1 vs. UniProtKB/TrEMBL
Match: F6HN91_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g00460 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 3.800e-14 Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 1
BLAST of Spo06766.1 vs. UniProtKB/TrEMBL
Match: B9T144_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0190620 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.500e-13 Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 1
BLAST of Spo06766.1 vs. UniProtKB/TrEMBL
Match: A0A072VRS9_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_1g115355 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.900e-13 Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 1
BLAST of Spo06766.1 vs. TAIR (Arabidopsis)
Match: AT2G39500.1 (unknown protein) HSP 1 Score: 75.5 bits (184), Expect = 1.500e-14 Identity = 29/47 (61.70%), Postives = 41/47 (87.23%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06766.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo06766.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo06766.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Spo06766.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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